
PFRMAT AL
TARGET T0125
AUTHOR 9751-8684-2764
METHOD The target sequence was blasted against all known proteins, each
METHOD reasonable hit was blasted against the sequence of all the proteins
METHOD in the PDB.  The top reasonable hits to a PDB were used as a model.
METHOD Manual alignment between the PDB sequence and the target.
MODEL  1
PARENT 3LYN_B
V  6     I    11
S  7     N    12
R  8     K    13
Q  9     A    14
E  10    Y    15
Q  11    E    16
S  12    V    17
Y  13    T    18
V  14    M    19
Q  15    K    20
R  16    I    21
G  17    Q    22
M  18    I    23
V  19    I    24
N  20    S    25
F  21    G    26
L  22    F    27
D  23    D    28
E  24    R    29
K  28    Q    30
L  29    L    31
V  30    T    32
K  31    A    33
R  32    W    34
F  33    L    35
R  34    R    36
D  35    V    37
M  36    H    38
R  37    G    39
W  38    R    40
N  39    R    41
L  40    L    42
G  41    T    43
P  42    N    44
G  43    N    45
F  44    Q    46
V  45    K    47
F  46    K    48
L  47    T    49
L  48    L    50
K  49    F    51
K  50    F    52
V  51    V    53
N  52    N    54
R  53    R    55
E  54    R    56
R  55    Y    57
M  56    M    58
M  57    Q    59
R  58    T    60
Y  59    H    61
C  60    W    62
M  61    Q    63
D  62    N    64
Y  63    Y    65
A  64    M    66
R  65    L    67
Y  66    W    68
S  67    V    69
K  68    K    70
K  69    R    71
I  70    K    72
L  71    I    73
Q  72    K    74
L  73    A    75
K  74    L    76
H  75    G    77
L  76    R    78
P  77    P    79
V  78    A    80
N  79    A    81
K  80    V    82
K  81    G    83
T  82    D    84
L  83    Y    85
T  84    T    86
K  85    R    87
M  86    L    88
G  87    G    89
R  88    A    90
F  89    E    91
V  90    I    92
G  91    G    93
Y  92    R    94
R  93    R    95
N  94    V    96
Y  95    D    97
G  96    M    98
V  97    V    99
I  98    F   100
R  99    F   101
E  100   Y   102
L  101   N   103
Y  102   F   104
A  103   L   105
D  104   S   106
V  105   G   107
F  106   R   108
R  107   K   109
D  108   M   110
V  109   I   111
Q  110   P   112
G  111   P   113
F  112   Y   114
R  113   S   115
A  119   A   116
A  120   Y   117
M  121   M   118
R  122   A   119
K  123   K   120
Y  124   L   121
S  125   N   122
S  126   A   123
K  127   L   124
D  128   R   125
P  129   P   126
G  130   A   127
T  131   D   128
F  132   V   129
P  133   P   130
C  134   V   131
K  135   K   132
N  136   N   133
E  137   H   134
TER
END


