
PFRMAT AL
TARGET T0126
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.85 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1fcda2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1fcd_A
D   4     G   115
G   5     Y   116
P   6     S   117
Q   7     E   118
K   8     E   119
Q   9     A   120
Q  10     A   121
L  11     A   122
E  12     K   123
M  13     L   124
P  14     P   125
L  15     H   126
V  16     A   127
L  17     W   128
D  18     K   129
Q  19     A   130
D  20     E   132
L  21     Q   133
T  22     T   134
Q  23     A   135
Q  24     I   136
M  25     L   137
R  26     R   138
L  27     K   139
R  28     Q   140
V  29     L   141
E  30     E   142
S  31     D   143
L  32     M   144
K  39     A   145
Q  40     D   146
D  41     G   147
G  42     G   148
E  43     T   149
K  44     V   150
L  45     V   151
I  46     I   152
R  47     A   153
P  48     P   154
A  49     P   155
E  50     A   156
S  51     A   157
V  52     P   158
Y  53     F   159
R  54     R   160
L  55     C   161
D  56     P   162
F  57     P   163
I  58     G   164
Q  59     P   165
Q  60     Y   166
Q  61     E   167
K  62     R   168
L  63     A   169
Q  64     S   170
F  65     Q   171
D  66     V   172
H  67     A   173
W  68     Y   174
N  69     Y   175
V  70     L   176
V  71     K   177
L  72     A   178
D  73     H   179
K  74     K   180
P  75     P   181
G  76     S   183
K  77     K   184
V  78     V   185
T  79     I   186
I  80     I   187
T  81     L   188
G  82     D   189
T  83     S   190
S  84     S   191
Q  85     Q   192
N  86     T   193
W  87     F   194
T  88     S   195
P  89     K   196
D  90     Q   197
L  91     S   198
T  92     Q   199
N  93     F   200
L  94     S   201
M  95     K   202
T  96     G   203
R  97     W   204
Q  98     E   205
L  99     R   206
L 100     L   207
D 101     E   213
P 102     N   214
A 103     A   215
A 104     M   216
I 105     I   217
F 106     E   218
W 107     W   219
R 108     H   220
K 109     P   221
E 110     G   222
D 111     P   223
S 112     D   224
D 113     S   225
A 114     A   226
M 115     V   227
D 116     V   228
E 119     K   229
A 120     V   230
D 121     D   231
A 122     G   232
L 123     G   233
E 124     E   234
M 139     M   235
Y 140     M   236
F 141     V   237
L 142     E   238
I 143     T   239
T 144     A   240
F 145     F   241
G 146     G   242
E 147     D   243
G 148     E   244
V 149     F   245
E 150     K   246
P 151     A   247
A 152     D   248
V 159     V   249
F 160     I   250
N 161     N   251
Q 162     L   252
L 163     I   253
TER
END

