
PFRMAT AL
TARGET T0126
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.77 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1af7_2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1af7
M   1     L   106
A   2     A   107
E   3     E   108
D   4     H   109
G   5     A   110
P   6     R   111
Q   7     R   112
K   8     R   113
Q   9     S   125
Q  10     T   126
L  11     G   127
E  12     E   128
M  13     E   129
P  14     P   130
L  15     Y   131
V  16     S   132
L  17     I   133
D  18     A   134
Q  19     I   135
D  20     T   136
L  21     L   137
T  22     A   138
Q  23     D   139
Q  24     A   140
M  25     L   141
R  26     G   142
L  27     M   143
R  28     A   144
V  29     P   145
E  30     G   146
S  31     R   147
L  32     W   148
K  33     K   149
Q  34     V   150
R  35     F   151
G  36     A   152
E  37     S   153
K  38     D   154
K  39     I   155
D  41     D   156
G  42     T   157
E  43     E   158
K  44     V   159
L  45     L   160
I  46     E   161
R  47     K   162
P  48     A   163
A  49     R   164
E  50     S   165
S  51     G   166
V  52     I   167
Y  53     Y   168
R  54     R   169
L  55     L   170
D  56     S   171
F  57     E   172
I  58     L   173
Q  59     K   174
Q  60     P   178
Q  61     Q   179
K  62     Q   180
L  63     L   181
Q  64     Q   182
F  65     R   183
D  66     Y   184
H  67     F   185
W  68     M   186
N  69     R   187
V  70     G   188
V  71     T   189
L  72     G   190
D  73     P   191
K  74     H   192
P  75     E   193
G  76     G   194
K  77     L   195
V  78     V   196
T  79     R   197
I  80     V   198
T  81     R   199
G  82     Q   200
T  83     E   201
S  84     L   202
Q  85     A   203
N  86     N   204
W  87     Y   205
T  88     V   206
P  89     E   207
D  90     F   208
L  91     S   209
T  92     S   210
N  93     N   212
L  94     L   213
M  95     L   214
T  96     E   215
R  97     K   216
Q  98     Q   217
L  99     Y   218
L 100     N   219
D 101     V   220
P 102     P   221
A 103     G   222
A 104     A   226
I 105     I   227
F 106     F   228
W 107     C   229
R 108     R   230
K 109     N   231
E 110     V   232
A 114     M   233
M 115     I   234
D 116     Y   235
W 117     F   236
N 118     D   237
E 119     K   238
A 120     T   239
D 121     T   240
A 122     Q   241
L 123     E   242
E 124     D   243
F 125     I   244
G 126     L   245
E 127     R   246
R 128     R   247
L 129     F   248
S 130     V   249
D 131     P   250
L 132     L   251
A 133     L   252
K 134     K   253
I 135     P   254
R 136     D   255
K 137     G   256
V 138     L   257
M 139     L   258
Y 140     F   259
F 141     A   260
L 142     S   263
I 143     E   264
T 144     N   265
F 145     F   266
G 146     S   267
E 147     N   268
G 148     L   269
V 149     V   270
E 150     R   271
P 151     E   272
A 152     F   273
N 153     S   274
L 154     L   275
K 155     R   276
A 156     G   277
S 157     Q   278
V 158     T   279
V 159     V   280
F 160     Y   281
N 161     A   282
Q 162     L   283
L 163     S   284
TER
END

