

PFRMAT AL
TARGET T0126
AUTHOR 9885-9936-6780
METHOD Smith-Waterman alignment of secondary structure
METHOD and sequence
MODEL 3
PARENT 1pud
L   11   T   62
E   12   G   63
M   13   A   64
P   14   D   65
L   15   I   66
V   16   I   67
L   17   L   68
D   18   G   69
D   20   N   70
L   21   T   71
Q   23   Y   72
Q   24   H   73
M   25   L   74
R   26   M   75
L   27   L   76
R   28   R   77
E   30   E   81
S   31   R   82
L   32   I   83
K   33   A   84
Q   34   K   85
R   35   L   86
G   36   G   87
Q   40   G   88
G   42   L   89
E   43   H   90
K   44   S   91
L   45   F   92
I   46   M   93
R   47   G   94
P   48   W   95
A   49   D   96
E   50   R   97
S   51   P   98
V   52   I   99
Y   53   L  100
L   55   T  101
D   56   D  102
F   57   S  103
Q   59   G  104
Q   60   Y  106
Q   61   Q  107
K   62   V  108
L   63   L  111
Q   64   S  112
D   66   S  113
W   68   L  114
N   69   T  115
V   71   K  116
L   72   Q  117
D   73   S  118
K   74   E  119
P   75   E  120
G   76   G  121
V   78   V  122
T   79   T  123
I   80   F  124
T   81   K  125
T   83   S  126
S   84   H  127
Q   85   D  129
N   86   G  130
T   88   S  131
P   89   R  132
D   90   S  136
L   91   P  137
T   92   E  138
N   93   S  140
L   94   I  141
M   95   E  142
T   96   I  143
R   97   Q  144
Q   98   H  145
L   99   L  146
L  100   L  147
D  101   G  148
A  103   S  149
A  104   D  150
I  105   I  151
F  106   V  152
W  107   M  153
R  108   A  154
K  109   F  155
E  110   D  156
D  111   E  157
S  112   C  158
D  113   T  159
A  114   P  160
M  115   Y  161
D  116   P  162
W  117   A  163
N  118   T  164
E  119   P  165
A  120   S  166
D  121   R  167
A  122   A  168
L  123   A  169
E  124   S  170
F  125   S  171
G  126   M  172
E  127   E  173
R  128   R  174
L  129   S  175
S  130   M  176
D  131   R  177
L  132   W  178
A  133   A  179
K  134   K  180
I  135   R  181
R  136   S  182
K  137   R  183
V  138   D  184
M  139   A  185
F  141   F  186
I  143   D  187
T  144   S  188
F  145   R  189
G  146   K  190
E  147   E  191
G  148   Q  192
V  149   A  193
E  150   E  194
P  151   N  195
A  152   A  196
N  153   A  197
L  154   L  198
A  156   F  199
S  157   G  200
V  158   I  201
V  159   Q  202
F  160   Q  203
N  161   G  204
Q  162   S  205
L  163   V  206
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Manager, Structural Biology            Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D


