
PFRMAT AL
TARGET T0126
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1KB5_B
REMARK DATE	1998-04-08
REMARK SCORE	?
Q 19 T 2
D 20 L 3
L 21 L 4
T 22 E 5
Q 23 Q 6
Q 24 N 7
M 25 P 8
R 26 R 9
L 27 W 10
R 28 R 11
V 29 L 12
E 30 V 13
S 31 P 14
L 32 R 15
K 33 G 16
Q 34 Q 17
R 35 A 18
G 36 V 19
E 37 N 20
K 38 L 21
K 39 R 22
Q 40 C 23
D 41 I 24
G 42 L 25
E 43 K 26
K 44 N 27
L 45 S 28
I 46 Q 29
R 47 Y 30
REMARK P 48 P 30
A 49 W 31
E 50 M 32
S 51 S 33
V 52 W 34
Y 53 Y 35
R 54 Q 36
L 55 Q 37
D 56 D 38
F 57 L 39
I 58 Q 40
Q 59 K 41
Q 60 Q 42
Q 61 L 43
K 62 Q 44
L 63 W 45
Q 64 L 46
F 65 F 47
D 66 T 48
H 67 L 49
W 68 R 50
N 69 S 51
V 70 P 52
V 71 G 53
L 72 D 54
D 73 K 55
K 74 E 56
P 75 V 57
G 76 K 58
K 77 S 59
V 78 L 60
T 79 P 61
I 80 G 62
T 81 A 63
G 82 D 64
T 83 Y 65
S 84 L 66
Q 85 A 67
N 86 T 68
W 87 R 69
T 88 V 70
P 89 T 71
D 90 D 72
L 91 T 73
T 92 E 74
N 93 L 75
L 94 R 76
M 95 L 77
T 96 Q 78
R 97 V 79
Q 98 A 80
L 99 N 81
L 100 M 82
D 101 S 83
P 102 Q 84
A 103 G 85
A 104 R 86
I 105 T 87
F 106 L 90
W 107 Y 91
R 108 C 92
K 109 T 93
E 110 C 94
D 111 S 95
S 112 A 96
D 113 A 97
A 114 P 98
M 115 D 99
D 116 W 100
W 117 G 101
N 118 A 102
E 119 S 103
A 120 A 104
D 121 E 105
REMARK A 122 T 105
L 123 L 106
E 124 Y 107
F 125 F 108
G 126 G 109
E 127 S 110
R 128 R 113
L 129 L 114
S 130 T 115
D 131 V 116
REMARK L 132 L 116
TER
END

