
PFRMAT AL
TARGET T0126
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1coj_A
M 1 A 57
A 2 N 58
E 3 Q 59
D 4 N 60
G 5 Y 61
P 6 S 62
Q 7 E 63
K 8 Y 64
Q 9 R 65
Q 10 E 66
L 11 L 67
E 12 K 68
M 13 V 69
P 14 E 70
L 15 E 71
V 16 T 72
L 17 F 73
D 18 N 74
Q 19 Y 75
D 20 M 76
L 21 G 77
T 22 V 78
Q 23 V 79
Q 24 L 80
M 25 H 81
R 26 E 82
L 27 L 83
R 28 Y 84
V 29 F 85
E 30 G 86
S 31 M 87
L 32 L 88
K 33 T 89
Q 34 P 90
R 35 G 91
G 36 G 92
E 37 K 93
K 38 G 94
K 39 E 95
Q 40 P 96
D 41 S 97
G 42 E 98
E 43 A 99
L 45 L 100
I 46 K 101
R 47 K 102
P 48 K 103
A 49 I 104
E 50 E 105
S 51 E 106
D 56 D 107
F 57 I 108
I 58 G 109
Q 59 G 110
Q 60 A 113
Q 61 C 114
K 62 T 115
L 63 N 116
Q 64 E 117
F 65 L 118
D 66 K 119
H 67 A 120
W 68 I 130
N 69 L 131
V 70 G 132
V 71 L 133
L 72 D 134
D 73 I 135
K 74 F 136
P 75 S 137
G 76 G 138
K 77 R 139
V 78 L 140
T 79 V 141
I 80 V 142
T 81 N 143
G 82 G 144
T 83 L 145
S 84 D 146
Q 85 A 147
N 86 H 148
W 87 N 149
T 88 V 150
P 89 Y 151
D 90 N 152
L 91 L 153
T 92 T 154
N 93 G 155
L 94 L 156
M 95 I 157
T 96 P 158
R 97 L 159
Q 98 I 160
L 99 V 161
L 100 I 162
D 101 D 163
P 102 P 178
A 103 P 179
A 104 Y 180
I 105 I 181
F 106 F 184
W 107 F 185
R 108 K 186
K 109 N 187
E 110 I 188
D 111 N 189
S 112 W 190
D 113 D 191
A 114 V 192
M 115 V 193
D 116 N 194
W 117 E 195
N 118 R 196
E 119 F 197
A 120 E 198
D 121 K 199
A 122 A 200
L 123 M 201
E 124 K 202
F 125 A 203
G 126 Y 204
E 127 E 205
R 128 A 206
L 129 L 207
S 130 K 208
D 131 D 209
L 132 F 210
A 133 I 211
K 134 K 212
TER
END

