
PFRMAT AL
TARGET T0127
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1d2n_A
A   15 E 505
K   16 D 506
T   17 Y 507
R   18 A 508
P   19 S 509
V   20 Y 510
F   21 I 511
P   22 M 512
F   23 N 513
S   24 G 514
A   25 I 515
I   26 I 516
V   27 K 517
G   28 W 518
Q   29 G 519
E   30 D 520
D   31 P 521
M   32 V 522
K   33 T 523
L   34 R 524
A   35 V 525
L   36 L 526
L   37 L 532
L   38 V 533
T   39 Q 534
A   40 Q 535
V   41 T 536
D   42 R 541
P   43 T 542
G   44 P 543
I   45 L 544
G   46 V 545
G   47 S 546
V   48 V 547
L   49 L 548
V   50 L 549
F   51 E 550
G   52 G 551
D   53 P 552
R   54 P 553
G   55 H 554
T   56 S 555
G   57 G 556
K   58 K 557
S   59 T 558
T   60 A 559
A   61 L 560
V   62 A 561
R   63 A 562
A   64 K 563
L   65 I 564
A   66 A 565
A   67 E 566
L   68 E 567
L   69 S 568
E   71 N 569
I   72 F 570
E   73 P 571
A   74 F 572
V   75 I 573
E   76 K 574
G   77 I 575
C   78 C 576
M   87 S 577
I   88 P 578
P   89 D 579
D   90 K 580
W   91 M 581
A   92 I 582
T   93 G 583
V   94 F 584
L   95 S 585
S   96 E 586
T   97 T 587
N   98 A 588
V   99 K 589
I  100 C 590
R  101 Q 591
K  102 A 592
P  103 M 593
T  104 K 594
P  105 K 595
V  106 I 596
V  107 F 597
D  108 D 598
G  112 D 599
V  113 A 600
S  114 Y 601
E  115 K 602
D  116 S 603
R  117 Q 604
V  118 L 605
V  119 C 607
G  120 V 608
A  121 V 609
L  122 V 610
D  123 D 612
I  124 I 613
E  125 E 614
R  126 R 615
A  127 L 616
I  128 L 617
A  134 D 618
F  135 Y 619
E  136 V 620
P  137 P 621
G  138 G 623
L  139 P 624
L  155 R 625
L  156 F 626
E  157 S 627
D  158 N 628
H  159 L 629
I  160 V 630
V  161 L 631
D  162 Q 632
L  163 A 633
L  164 L 634
L  165 L 635
D  166 V 636
V  167 L 637
A  168 L 638
S  181 K 639
I  182 K 640
R  183 A 641
H  184 P 642
P  185 P 643
A  186 Q 644
R  187 K 647
F  188 L 648
V  189 L 649
L  190 I 650
V  191 I 651
G  192 G 652
S  193 T 653
G  194 T 654
N  195 S 655
R  202 R 656
P  203 K 657
Q  204 D 658
L  205 V 659
L  206 L 660
D  207 Q 661
R  208 E 662
F  209 F 669
G  210 S 670
L  211 T 671
S  212 T 672
V  213 I 673
E  214 H 674
V  215 V 675
L  216 P 676
S  217 N 677
P  218 I 678
R  219 A 679
D  220 T 680
V  221 G 681
E  222 E 682
T  223 Q 683
R  224 L 684
V  225 L 685
E  226 E 686
V  227 A 687
I  228 L 688
R  229 E 689
R  230 L 690
R  231 L 691
D  232 G 692
T  233 N 693
Y  234 F 694
D  249 K 695
M  250 D 696
D  251 K 697
I  252 E 698
R  253 R 699
N  254 T 700
Q  255 T 701
I  256 I 702
A  259 A 703
R  260 Q 704
E  261 Q 705
R  262 V 706
L  263 K 707
P  264 K 709
K  265 K 710
V  266 V 711
E  267 W 712
A  268 I 713
P  269 G 714
A  272 I 715
L  273 K 716
Y  274 K 717
D  275 L 718
C  276 L 719
A  277 M 720
A  278 L 721
L  279 I 722
C  280 E 723
I  281 M 724
A  282 S 725
L  283 L 726
G  284 Q 727
S  285 M 728
D  286 D 729
G  287 P 730
L  288 E 731
R  289 R 733
G  290 V 734
E  291 R 735
L  292 K 736
T  293 F 737
L  294 L 738
L  295 A 739
R  296 L 740
S  297 L 741
A  298 R 742
R  299 E 743
A  300 E 744
G  306 G 745
A  307 A 746
T  308 S 747
A  309 P 748
V  310 L 749
G  311 D 750
TER
END

