
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   35 (  140),  selected   35 , name T0290AL242_3
# Molecule2: number of CA atoms  173 ( 1339),  selected   35 , name T0290
# PARAMETERS: T0290AL242_3.T0290  -3  -ie  -d:4  -o1  -sda  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20        28 - 47          4.96    10.35
  LONGEST_CONTINUOUS_SEGMENT:    20        29 - 48          4.80    10.38
  LONGEST_CONTINUOUS_SEGMENT:    20        30 - 49          4.77    10.68
  LCS_AVERAGE:     10.98

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     8        24 - 31          1.96    20.46
  LONGEST_CONTINUOUS_SEGMENT:     8        46 - 53          1.80    17.59
  LCS_AVERAGE:      3.88

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:     5        24 - 28          0.86    20.76
  LONGEST_CONTINUOUS_SEGMENT:     5        31 - 35          0.36    15.35
  LONGEST_CONTINUOUS_SEGMENT:     5        44 - 48          0.85    22.51
  LONGEST_CONTINUOUS_SEGMENT:     5        46 - 50          0.91    17.94
  LONGEST_CONTINUOUS_SEGMENT:     5        47 - 51          0.97    17.57
  LONGEST_CONTINUOUS_SEGMENT:     5        50 - 54          0.95    19.13
  LCS_AVERAGE:      2.64

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  173
LCS_GDT     E      21     E      21      4    5   16     1    6    6    7    7    9   10   11   12   13   13   14   16   18   20   21   24   24   26   27 
LCS_GDT     L      22     L      22      4    5   17     3    4    4    7    7    9   10   11   12   13   13   15   16   18   20   21   24   24   26   27 
LCS_GDT     F      23     F      23      4    6   17     3    4    5    5    6    7    9   10   12   13   13   15   16   17   18   19   20   23   26   27 
LCS_GDT     S      24     S      24      5    8   17     4    4    5    6    9    9    9   10   12   13   13   15   16   17   18   18   20   21   23   25 
LCS_GDT     D      25     D      25      5    8   17     4    4    5    6    9    9    9    9   12   13   13   14   15   16   17   18   18   19   20   20 
LCS_GDT     V      26     V      26      5    8   17     4    4    5    6    9    9    9    9   12   13   13   14   15   16   17   18   18   18   20   20 
LCS_GDT     C      27     C      27      5    8   17     4    4    5    6    9    9    9   10   12   13   13   15   15   17   20   21   24   24   26   27 
LCS_GDT     P      28     P      28      5    8   20     4    5    5    6    9    9    9   11   12   13   13   16   17   18   21   21   24   24   26   27 
LCS_GDT     K      29     K      29      4    8   20     4    5    5    6    9    9    9   11   11   12   14   18   18   18   21   21   24   24   26   27 
LCS_GDT     T      30     T      30      4    8   20     4    5    5    6    9    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     C      31     C      31      5    8   20     4    6    6    7    9    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     E      32     E      32      5    5   20     4    6    6    7    7    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     N      33     N      33      5    5   20     4    6    6    7    7    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     F      34     F      34      5    5   20     4    6    6    7    7    8   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     R      35     R      35      5    5   20     4    6    6    7    9    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     C      36     C      36      4    5   20     4    4    5    5    7    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     L      37     L      37      4    5   20     4    4    5    5    7    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     C      38     C      38      4    6   20     4    4    5    5    7    9   10   11   12   14   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     T      39     T      39      4    6   20     4    4    5    5    7    9   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     G      40     G      40      4    6   20     3    3    4    5    7    7   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     E      41     E      41      4    6   20     3    4    4    5    7    7    9   11   11   12   13   16   19   19   21   21   24   24   25   27 
LCS_GDT     K      42     K      42      4    7   20     3    4    6    7    7    7    8   10   11   12   14   16   19   19   21   21   24   24   25   27 
LCS_GDT     G      43     G      43      4    7   20     0    4    6    7    7    7    9   11   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     T      44     T      44      5    7   20     4    4    6    7    7    8   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     G      45     G      45      5    7   20     4    4    6    7    7    8   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     K      46     K      46      5    8   20     4    4    6    7    7    8   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     S      47     S      47      5    8   20     4    4    6    7    7    8   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     T      48     T      48      5    8   20     3    4    6    7    7    7   10   12   13   15   16   18   19   19   21   21   24   24   26   27 
LCS_GDT     Q      49     Q      49      5    8   20     3    4    6    6    7    7   10   11   12   12   14   15   16   19   20   21   22   23   25   27 
LCS_GDT     K      50     K      50      5    8   18     3    4    6    6    7    7   10   11   12   12   14   15   16   18   19   20   22   23   24   27 
LCS_GDT     P      51     P      51      5    8   18     3    4    6    6    7    7   10   11   12   12   14   14   16   18   19   21   22   24   26   27 
LCS_GDT     L      52     L      52      5    8   18     3    4    4    6    7    7    9   10   11   12   14   14   16   18   19   21   22   24   26   27 
LCS_GDT     H      53     H      53      5    8   18     3    4    4    6    7    7   10   11   12   12   14   14   16   17   18   20   20   23   26   26 
LCS_GDT     Y      54     Y      54      5    6   18     3    3    4    6    6    6    7   11   12   12   14   14   16   17   19   20   20   21   22   24 
LCS_GDT     K      55     K      55      3    3   17     3    3    3    3    4    6   10   11   12   12   14   14   16   17   18   20   20   21   22   23 
LCS_AVERAGE  LCS_A:   5.84  (   2.64    3.88   10.98 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      4      6      6      7      9      9     10     12     13     15     16     18     19     19     21     21     24     24     26     27 
GDT PERCENT_CA   2.31   3.47   3.47   4.05   5.20   5.20   5.78   6.94   7.51   8.67   9.25  10.40  10.98  10.98  12.14  12.14  13.87  13.87  15.03  15.61
GDT RMS_LOCAL    0.04   0.53   0.53   0.99   1.92   1.92   2.46   2.90   3.03   3.48   3.63   4.18   4.49   4.49   5.12   5.17   5.95   5.95   6.68   6.63
GDT RMS_ALL_CA  14.38  15.66  15.66  16.15  20.26  20.26  12.40  10.64  10.76  10.43  10.55  10.28  10.54  10.54  10.19  10.31   9.86   9.86   9.44   9.82

#      Molecule1      Molecule2       DISTANCE
LGA    E      21      E      21         14.206
LGA    L      22      L      22         13.328
LGA    F      23      F      23         15.644
LGA    S      24      S      24         16.859
LGA    D      25      D      25         22.157
LGA    V      26      V      26         19.396
LGA    C      27      C      27         11.911
LGA    P      28      P      28          9.791
LGA    K      29      K      29          7.358
LGA    T      30      T      30          1.157
LGA    C      31      C      31          3.517
LGA    E      32      E      32          2.535
LGA    N      33      N      33          4.598
LGA    F      34      F      34          2.257
LGA    R      35      R      35          3.539
LGA    C      36      C      36          3.483
LGA    L      37      L      37          3.753
LGA    C      38      C      38          6.888
LGA    T      39      T      39          6.026
LGA    G      40      G      40          3.797
LGA    E      41      E      41          9.583
LGA    K      42      K      42          9.196
LGA    G      43      G      43          4.827
LGA    T      44      T      44          1.848
LGA    G      45      G      45          1.844
LGA    K      46      K      46          3.843
LGA    S      47      S      47          2.046
LGA    T      48      T      48          7.402
LGA    Q      49      Q      49         10.721
LGA    K      50      K      50         13.145
LGA    P      51      P      51         11.170
LGA    L      52      L      52         11.305
LGA    H      53      H      53         12.331
LGA    Y      54      Y      54         15.379
LGA    K      55      K      55         21.248

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   35  173    4.0     12    2.90     6.647     6.091     0.399

LGA_LOCAL      RMSD =  2.904  Number of atoms =   12  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 10.571  Number of atoms =   35 
Std_ALL_ATOMS  RMSD =  9.354  (standard rmsd on all 35 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.456721 * X  +  -0.543433 * Y  +  -0.704334 * Z  +  34.680424
  Y_new =   0.878963 * X  +   0.153531 * Y  +   0.451501 * Z  +  58.369473
  Z_new =  -0.137224 * X  +  -0.825294 * Y  +   0.547778 * Z  +   5.259815 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.984825    2.156768  [ DEG:   -56.4263    123.5737 ]
  Theta =   0.137658    3.003935  [ DEG:     7.8872    172.1128 ]
  Phi   =   1.091581   -2.050012  [ DEG:    62.5430   -117.4570 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0290AL242_3                                  
REMARK     2: T0290                                         
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0290AL242_3.T0290 -3 -ie -d:4 -o1 -sda 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   35  173   4.0   12   2.90   6.091     9.35
REMARK  ---------------------------------------------------------- 
MOLECULE T0290AL242_3
REMARK Aligment from pdb entry: 1ji9_A
ATOM      1  N   GLU    21      24.481  55.887   9.098  1.00  0.00              
ATOM      2  CA  GLU    21      24.332  56.979   8.092  1.00  0.00              
ATOM      3  C   GLU    21      25.566  57.042   7.188  1.00  0.00              
ATOM      4  O   GLU    21      26.610  56.512   7.512  1.00  0.00              
ATOM      5  N   LEU    22      25.456  57.689   6.059  1.00  0.00              
ATOM      6  CA  LEU    22      26.626  57.787   5.139  1.00  0.00              
ATOM      7  C   LEU    22      27.830  58.358   5.885  1.00  0.00              
ATOM      8  O   LEU    22      28.962  58.194   5.478  1.00  0.00              
ATOM      9  N   PHE    23      27.576  59.019   6.975  1.00  0.00              
ATOM     10  CA  PHE    23      28.676  59.621   7.795  1.00  0.00              
ATOM     11  C   PHE    23      29.815  60.138   6.923  1.00  0.00              
ATOM     12  O   PHE    23      30.937  60.180   7.371  1.00  0.00              
ATOM     13  N   SER    24      29.574  60.504   5.690  1.00  0.00              
ATOM     14  CA  SER    24      30.727  60.956   4.859  1.00  0.00              
ATOM     15  C   SER    24      30.332  61.440   3.473  1.00  0.00              
ATOM     16  O   SER    24      29.312  61.078   2.920  1.00  0.00              
ATOM     17  N   ASP    25      31.214  62.193   2.891  1.00  0.00              
ATOM     18  CA  ASP    25      31.027  62.664   1.503  1.00  0.00              
ATOM     19  C   ASP    25      31.902  61.770   0.620  1.00  0.00              
ATOM     20  O   ASP    25      31.771  61.733  -0.587  1.00  0.00              
ATOM     21  N   VAL    26      32.785  61.019   1.248  1.00  0.00              
ATOM     22  CA  VAL    26      33.667  60.084   0.479  1.00  0.00              
ATOM     23  C   VAL    26      33.207  58.640   0.678  1.00  0.00              
ATOM     24  O   VAL    26      33.768  57.708   0.134  1.00  0.00              
ATOM     25  N   CYS    27      32.196  58.460   1.469  1.00  0.00              
ATOM     26  CA  CYS    27      31.667  57.114   1.754  1.00  0.00              
ATOM     27  C   CYS    27      30.145  57.116   1.830  1.00  0.00              
ATOM     28  O   CYS    27      29.534  58.126   2.121  1.00  0.00              
ATOM     29  N   PRO    28      29.588  55.963   1.599  1.00  0.00              
ATOM     30  CA  PRO    28      28.135  55.786   1.674  1.00  0.00              
ATOM     31  C   PRO    28      27.774  55.342   3.092  1.00  0.00              
ATOM     32  O   PRO    28      28.614  55.319   3.970  1.00  0.00              
ATOM     33  N   LYS    29      26.553  54.976   3.329  1.00  0.00              
ATOM     34  CA  LYS    29      26.181  54.521   4.698  1.00  0.00              
ATOM     35  C   LYS    29      26.544  53.047   4.872  1.00  0.00              
ATOM     36  O   LYS    29      26.264  52.441   5.887  1.00  0.00              
ATOM     37  N   THR    30      27.155  52.463   3.880  1.00  0.00              
ATOM     38  CA  THR    30      27.525  51.025   3.977  1.00  0.00              
ATOM     39  C   THR    30      29.038  50.863   4.159  1.00  0.00              
ATOM     40  O   THR    30      29.517  49.775   4.411  1.00  0.00              
ATOM     41  N   CYS    31      29.806  51.916   4.039  1.00  0.00              
ATOM     42  CA  CYS    31      31.263  51.775   4.210  1.00  0.00              
ATOM     43  C   CYS    31      31.577  51.006   5.480  1.00  0.00              
ATOM     44  O   CYS    31      31.448  51.521   6.573  1.00  0.00              
ATOM     45  N   GLU    32      32.013  49.792   5.362  1.00  0.00              
ATOM     46  CA  GLU    32      32.353  49.040   6.587  1.00  0.00              
ATOM     47  C   GLU    32      33.679  49.550   7.124  1.00  0.00              
ATOM     48  O   GLU    32      34.104  49.226   8.214  1.00  0.00              
ATOM     49  N   ASN    33      34.294  50.398   6.376  1.00  0.00              
ATOM     50  CA  ASN    33      35.552  51.017   6.824  1.00  0.00              
ATOM     51  C   ASN    33      35.192  52.023   7.877  1.00  0.00              
ATOM     52  O   ASN    33      35.955  52.373   8.745  1.00  0.00              
ATOM     53  N   PHE    34      34.002  52.484   7.766  1.00  0.00              
ATOM     54  CA  PHE    34      33.493  53.503   8.708  1.00  0.00              
ATOM     55  C   PHE    34      32.529  52.855   9.675  1.00  0.00              
ATOM     56  O   PHE    34      32.030  53.461  10.603  1.00  0.00              
ATOM     57  N   ARG    35      32.264  51.621   9.434  1.00  0.00              
ATOM     58  CA  ARG    35      31.334  50.864  10.276  1.00  0.00              
ATOM     59  C   ARG    35      31.883  50.702  11.695  1.00  0.00              
ATOM     60  O   ARG    35      31.209  50.211  12.580  1.00  0.00              
ATOM     61  N   CYS    36      33.829  55.564  11.632  1.00  0.00              
ATOM     62  CA  CYS    36      34.232  56.514  10.555  1.00  0.00              
ATOM     63  C   CYS    36      35.757  56.612  10.512  1.00  0.00              
ATOM     64  O   CYS    36      36.360  57.443  11.162  1.00  0.00              
ATOM     65  N   LEU    37      36.382  55.746   9.765  1.00  0.00              
ATOM     66  CA  LEU    37      37.864  55.749   9.682  1.00  0.00              
ATOM     67  C   LEU    37      38.386  57.101   9.191  1.00  0.00              
ATOM     68  O   LEU    37      39.523  57.456   9.433  1.00  0.00              
ATOM     69  N   CYS    38      37.575  57.868   8.518  1.00  0.00              
ATOM     70  CA  CYS    38      38.064  59.199   8.047  1.00  0.00              
ATOM     71  C   CYS    38      37.543  60.310   8.963  1.00  0.00              
ATOM     72  O   CYS    38      37.621  61.477   8.637  1.00  0.00              
ATOM     73  N   THR    39      37.018  59.962  10.106  1.00  0.00              
ATOM     74  CA  THR    39      36.501  61.003  11.036  1.00  0.00              
ATOM     75  C   THR    39      37.456  62.187  11.102  1.00  0.00              
ATOM     76  O   THR    39      37.056  63.322  11.270  1.00  0.00              
ATOM     77  N   GLY    40      38.715  61.924  10.973  1.00  0.00              
ATOM     78  CA  GLY    40      39.721  63.021  11.029  1.00  0.00              
ATOM     79  C   GLY    40      39.413  64.055   9.947  1.00  0.00              
ATOM     80  O   GLY    40      39.683  63.844   8.781  1.00  0.00              
ATOM     81  N   GLU    41      38.855  65.174  10.320  1.00  0.00              
ATOM     82  CA  GLU    41      38.539  66.218   9.306  1.00  0.00              
ATOM     83  C   GLU    41      39.757  67.110   9.081  1.00  0.00              
ATOM     84  O   GLU    41      39.665  68.321   9.040  1.00  0.00              
ATOM     85  N   LYS    42      40.898  66.507   8.932  1.00  0.00              
ATOM     86  CA  LYS    42      42.144  67.280   8.702  1.00  0.00              
ATOM     87  C   LYS    42      42.418  67.379   7.200  1.00  0.00              
ATOM     88  O   LYS    42      41.834  68.186   6.505  1.00  0.00              
ATOM     89  N   GLY    43      43.286  66.553   6.692  1.00  0.00              
ATOM     90  CA  GLY    43      43.580  66.582   5.235  1.00  0.00              
ATOM     91  C   GLY    43      42.697  65.552   4.532  1.00  0.00              
ATOM     92  O   GLY    43      42.680  65.452   3.321  1.00  0.00              
ATOM     93  N   THR    44      41.962  64.778   5.290  1.00  0.00              
ATOM     94  CA  THR    44      41.081  63.749   4.685  1.00  0.00              
ATOM     95  C   THR    44      39.715  64.335   4.362  1.00  0.00              
ATOM     96  O   THR    44      38.686  63.716   4.552  1.00  0.00              
ATOM     97  N   GLY    45      39.716  65.524   3.881  1.00  0.00              
ATOM     98  CA  GLY    45      38.451  66.215   3.525  1.00  0.00              
ATOM     99  C   GLY    45      37.453  65.239   2.892  1.00  0.00              
ATOM    100  O   GLY    45      37.789  64.477   2.007  1.00  0.00              
ATOM    101  N   LYS    46      36.226  65.262   3.340  1.00  0.00              
ATOM    102  CA  LYS    46      35.202  64.343   2.763  1.00  0.00              
ATOM    103  C   LYS    46      34.594  64.964   1.513  1.00  0.00              
ATOM    104  O   LYS    46      34.270  64.288   0.557  1.00  0.00              
ATOM    105  N   SER    47      34.456  66.253   1.520  1.00  0.00              
ATOM    106  CA  SER    47      33.890  66.969   0.345  1.00  0.00              
ATOM    107  C   SER    47      34.436  66.358  -0.923  1.00  0.00              
ATOM    108  O   SER    47      33.779  66.267  -1.940  1.00  0.00              
ATOM    109  N   THR    48      35.641  65.923  -0.834  1.00  0.00              
ATOM    110  CA  THR    48      36.313  65.266  -1.988  1.00  0.00              
ATOM    111  C   THR    48      35.326  64.381  -2.751  1.00  0.00              
ATOM    112  O   THR    48      35.512  64.108  -3.916  1.00  0.00              
ATOM    113  N   GLN    49      34.307  63.914  -2.059  1.00  0.00              
ATOM    114  CA  GLN    49      33.268  63.008  -2.634  1.00  0.00              
ATOM    115  C   GLN    49      33.697  61.567  -2.452  1.00  0.00              
ATOM    116  O   GLN    49      32.899  60.652  -2.470  1.00  0.00              
ATOM    117  N   LYS    50      34.955  61.375  -2.266  1.00  0.00              
ATOM    118  CA  LYS    50      35.498  60.026  -2.059  1.00  0.00              
ATOM    119  C   LYS    50      36.844  60.136  -1.348  1.00  0.00              
ATOM    120  O   LYS    50      37.513  61.147  -1.416  1.00  0.00              
ATOM    121  N   PRO    51      37.238  59.120  -0.658  1.00  0.00              
ATOM    122  CA  PRO    51      38.551  59.185   0.059  1.00  0.00              
ATOM    123  C   PRO    51      39.517  58.115  -0.449  1.00  0.00              
ATOM    124  O   PRO    51      39.318  57.521  -1.490  1.00  0.00              
ATOM    125  N   LEU    52      40.578  57.884   0.278  1.00  0.00              
ATOM    126  CA  LEU    52      41.582  56.876  -0.156  1.00  0.00              
ATOM    127  C   LEU    52      41.967  55.955   1.006  1.00  0.00              
ATOM    128  O   LEU    52      43.002  55.321   0.986  1.00  0.00              
ATOM    129  N   HIS    53      41.143  55.862   2.014  1.00  0.00              
ATOM    130  CA  HIS    53      41.487  54.958   3.161  1.00  0.00              
ATOM    131  C   HIS    53      40.610  53.719   3.123  1.00  0.00              
ATOM    132  O   HIS    53      41.055  52.606   3.326  1.00  0.00              
ATOM    133  N   TYR    54      39.368  53.923   2.872  1.00  0.00              
ATOM    134  CA  TYR    54      38.405  52.801   2.816  1.00  0.00              
ATOM    135  C   TYR    54      38.528  52.065   1.492  1.00  0.00              
ATOM    136  O   TYR    54      38.478  50.852   1.422  1.00  0.00              
ATOM    137  N   LYS    55      38.681  52.809   0.450  1.00  0.00              
ATOM    138  CA  LYS    55      38.809  52.213  -0.908  1.00  0.00              
ATOM    139  C   LYS    55      39.620  50.915  -0.853  1.00  0.00              
ATOM    140  O   LYS    55      39.009  49.863  -0.776  1.00  0.00              
END
