
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  104 (  104),  selected  104 , name T0341TS168_5-D2
# Molecule2: number of CA atoms  104 (  810),  selected  104 , name T0341_D2.pdb
# PARAMETERS: T0341TS168_5-D2.T0341_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   104        75 - 178         3.74     3.74
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    26       118 - 143         1.98     4.67
  LONGEST_CONTINUOUS_SEGMENT:    26       119 - 144         1.92     4.58
  LONGEST_CONTINUOUS_SEGMENT:    26       120 - 145         1.99     4.53
  LONGEST_CONTINUOUS_SEGMENT:    26       121 - 146         1.97     4.49
  LCS_AVERAGE:     17.47

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15       158 - 172         0.91    10.39
  LONGEST_CONTINUOUS_SEGMENT:    15       159 - 173         0.88     9.11
  LCS_AVERAGE:      9.10

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  104
LCS_GDT     S      75     S      75     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      76     L      76     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T      77     T      77     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A      78     A      78     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A      79     A      79     13   16  104    11   12   19   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R      80     R      80     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     N      81     N      81     13   16  104    11   12   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      82     L      82     13   16  104    11   12   14   22   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     I      83     I      83     13   16  104    11   12   14   24   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     E      84     E      84     13   16  104    11   12   18   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q      85     Q      85     13   16  104    11   12   14   22   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     K      86     K      86     13   16  104     3   12   14   21   30   44   55   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q      87     Q      87     13   16  104     3    3    5   14   23   40   52   65   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     V      88     V      88      4   16  104     3    3    8   16   26   34   50   62   77   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R      89     R      89      4   16  104     3    4    8   15   26   39   52   67   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P      90     P      90      4   16  104     1    3    7   13   23   34   52   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     M      91     M      91      4   11  104     0    4    6   12   19   32   41   62   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      92     L      92      5   11  104     3    5   14   26   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      93     L      93      5   11  104     3    9   18   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      94     L      94      5   11  104     3    7   14   22   34   49   60   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D      95     D      95      5   11  104     3    9   14   22   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D      96     D      96      5   11  104     3    3    8   20   31   45   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R      97     R      97      4   11  104     3    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A      98     A      98      5   11  104     4    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L      99     L      99      5   11  104     4    5    5   19   27   37   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     100     P     100      5    8  104     4    5    5    7   16   22   37   50   65   79   87   96  103  104  104  104  104  104  104  104 
LCS_GDT     E     101     E     101      5    8  104     4    5   12   19   30   43   54   65   78   86   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     F     102     F     102      5    8  104     4    9   19   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T     103     T     103      3    8  104     3    3   14   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     104     G     104      4    7  104     3    3    7   20   32   43   54   69   81   91   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     105     V     105      4    9  104     3    3    7   19   32   43   54   69   81   91   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q     106     Q     106      4    9  104     3    8   15   29   39   49   62   73   84   92   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T     107     T     107      4    9  104     3    3    4    9   39   46   56   66   81   92   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q     108     Q     108      4    9  104     3    5    9   22   33   49   58   66   81   92   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D     109     D     109      5    9  104     3    5    8   16   30   35   58   66   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     110     P     110      5    9  104     3    5    7   17   30   40   56   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     N     111     N     111      5    9  104     3    5    8   13   22   32   43   70   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     112     A     112      5    9  104     3    4    8   13   21   32   51   59   71   93   97  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     113     V     113      5    9  104     3    4    8   13   21   30   43   49   68   87   97  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     114     V     114      4    9  104     3    8   16   23   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     I     115     I     115      4    9  104     3    4    7   19   30   38   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     116     G     116      5    9  104     3    5    7   10   19   29   53   69   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     117     L     117      5   25  104     3    9   14   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     118     A     118      5   26  104     3    5    9   22   31   43   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     119     P     119      5   26  104     3    5   10   23   27   41   57   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     E     120     E     120      5   26  104     3    6   14   19   27   41   54   70   83   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     H     121     H     121      3   26  104     3    6   13   16   22   35   56   70   83   92   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     F     122     F     122     14   26  104     3    3    7   19   30   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     H     123     H     123     14   26  104     0    3    9   18   31   43   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Y     124     Y     124     14   26  104     9   12   16   20   30   41   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q     125     Q     125     14   26  104    11   12   16   23   30   41   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     126     L     126     14   26  104    11   12   16   23   29   41   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     127     L     127     14   26  104    11   12   16   23   30   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     N     128     N     128     14   26  104    11   12   16   23   30   42   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Q     129     Q     129     14   26  104    11   12   16   23   30   42   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     130     A     130     14   26  104    11   12   16   23   29   42   60   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     F     131     F     131     14   26  104    11   12   16   23   30   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R     132     R     132     14   26  104    11   12   16   23   30   42   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     133     L     133     14   26  104    11   12   16   23   27   40   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     134     L     134     14   26  104    11   12   16   23   30   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     135     L     135     14   26  104    11   12   16   23   30   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D     136     D     136     14   26  104     4    9   16   23   32   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     137     G     137     14   26  104     4    9   16   23   32   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     138     A     138     14   26  104     4    9   16   24   34   48   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     139     P     139     12   26  104     4    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     140     L     140     12   26  104     4    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     I     141     I     141     11   26  104     3    8   16   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     142     A     142     11   26  104     3    9   16   23   39   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     I     143     I     143      4   26  104     4    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     H     144     H     144      4   26  104     2   11   15   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     K     145     K     145      4   26  104     2    4    6   16   27   42   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     146     A     146      4   26  104     7   11   15   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R     147     R     147      3   24  104     3    4    8   24   39   47   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Y     148     Y     148      9   15  104     3    8    8   14   21   34   51   66   81   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Y     149     Y     149      9   15  104     3    8    8   20   39   45   58   71   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     K     150     K     150      9   21  104     3    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     R     151     R     151      9   21  104     3    8   13   25   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     K     152     K     152      9   21  104     3    8   13   25   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D     153     D     153      9   21  104     3    8   13   30   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     154     G     154      9   21  104     3    9   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     155     L     155      9   21  104     3    6   15   28   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     156     A     156      9   21  104     3    8   13   26   39   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     157     L     157      7   21  104     2    7   13   28   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     158     G     158     15   21  104     0    6   11   14   24   39   56   70   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     159     P     159     15   21  104    10   13   15   18   29   45   58   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     G     160     G     160     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     P     161     P     161     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     F     162     F     162     15   21  104    10   13   15   25   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     163     V     163     15   21  104    10   13   15   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T     164     T     164     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     165     A     165     15   21  104    10   13   18   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     L     166     L     166     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     E     167     E     167     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     Y     168     Y     168     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     169     A     169     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T     170     T     170     15   21  104    10   13   21   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     D     171     D     171     15   20  104     3    3   14   17   20   28   49   62   79   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     T     172     T     172     15   20  104     3   13   14   17   20   29   50   70   83   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     K     173     K     173     15   20  104     3    5   15   21   37   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     A     174     A     174      6   18  104     3    8   20   31   40   49   62   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     M     175     M     175      6    9  104     3    5    6    9   11   15   36   63   77   89   97  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     176     V     176      6    9  104     3    5    6   16   30   42   60   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_GDT     V     177     V     177      6    9  104     3    5    6    7    9   13   19   40   50   69   74   93   99  104  104  104  104  104  104  104 
LCS_GDT     G     178     G     178      6    9  104     3    5    6   18   30   44   61   73   84   93   98  102  103  104  104  104  104  104  104  104 
LCS_AVERAGE  LCS_A:  42.19  (   9.10   17.47  100.00 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     11     13     21     31     40     49     62     73     84     93     98    102    103    104    104    104    104    104    104    104 
GDT PERCENT_CA  10.58  12.50  20.19  29.81  38.46  47.12  59.62  70.19  80.77  89.42  94.23  98.08  99.04 100.00 100.00 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.13   0.48   1.20   1.47   1.70   1.99   2.57   2.86   3.13   3.38   3.49   3.62   3.67   3.74   3.74   3.74   3.74   3.74   3.74   3.74
GDT RMS_ALL_CA   8.89   9.96   4.15   4.10   4.17   3.99   3.79   3.78   3.75   3.78   3.74   3.74   3.74   3.74   3.74   3.74   3.74   3.74   3.74   3.74

#      Molecule1      Molecule2       DISTANCE
LGA    S      75      S      75          2.553
LGA    L      76      L      76          2.793
LGA    T      77      T      77          3.315
LGA    A      78      A      78          2.708
LGA    A      79      A      79          1.859
LGA    R      80      R      80          1.990
LGA    N      81      N      81          2.390
LGA    L      82      L      82          3.125
LGA    I      83      I      83          3.183
LGA    E      84      E      84          2.242
LGA    Q      85      Q      85          3.547
LGA    K      86      K      86          4.712
LGA    Q      87      Q      87          5.299
LGA    V      88      V      88          5.508
LGA    R      89      R      89          5.549
LGA    P      90      P      90          4.904
LGA    M      91      M      91          5.880
LGA    L      92      L      92          2.595
LGA    L      93      L      93          3.007
LGA    L      94      L      94          3.581
LGA    D      95      D      95          3.269
LGA    D      96      D      96          3.386
LGA    R      97      R      97          3.779
LGA    A      98      A      98          1.670
LGA    L      99      L      99          4.031
LGA    P     100      P     100          7.606
LGA    E     101      E     101          6.292
LGA    F     102      F     102          1.563
LGA    T     103      T     103          3.098
LGA    G     104      G     104          5.242
LGA    V     105      V     105          5.093
LGA    Q     106      Q     106          3.242
LGA    T     107      T     107          5.175
LGA    Q     108      Q     108          5.487
LGA    D     109      D     109          5.748
LGA    P     110      P     110          4.285
LGA    N     111      N     111          5.517
LGA    A     112      A     112          6.309
LGA    V     113      V     113          6.160
LGA    V     114      V     114          2.258
LGA    I     115      I     115          4.004
LGA    G     116      G     116          4.267
LGA    L     117      L     117          2.215
LGA    A     118      A     118          3.373
LGA    P     119      P     119          3.981
LGA    E     120      E     120          4.330
LGA    H     121      H     121          4.610
LGA    F     122      F     122          3.327
LGA    H     123      H     123          2.777
LGA    Y     124      Y     124          4.354
LGA    Q     125      Q     125          4.208
LGA    L     126      L     126          3.849
LGA    L     127      L     127          3.062
LGA    N     128      N     128          3.571
LGA    Q     129      Q     129          3.759
LGA    A     130      A     130          3.486
LGA    F     131      F     131          3.005
LGA    R     132      R     132          3.629
LGA    L     133      L     133          3.939
LGA    L     134      L     134          3.312
LGA    L     135      L     135          3.108
LGA    D     136      D     136          2.630
LGA    G     137      G     137          2.543
LGA    A     138      A     138          1.832
LGA    P     139      P     139          0.504
LGA    L     140      L     140          1.122
LGA    I     141      I     141          2.365
LGA    A     142      A     142          3.252
LGA    I     143      I     143          0.570
LGA    H     144      H     144          2.101
LGA    K     145      K     145          3.953
LGA    A     146      A     146          1.914
LGA    R     147      R     147          3.744
LGA    Y     148      Y     148          5.155
LGA    Y     149      Y     149          4.900
LGA    K     150      K     150          2.638
LGA    R     151      R     151          1.799
LGA    K     152      K     152          2.222
LGA    D     153      D     153          1.362
LGA    G     154      G     154          1.105
LGA    L     155      L     155          3.530
LGA    A     156      A     156          3.415
LGA    L     157      L     157          2.543
LGA    G     158      G     158          4.985
LGA    P     159      P     159          3.914
LGA    G     160      G     160          1.516
LGA    P     161      P     161          2.303
LGA    F     162      F     162          3.018
LGA    V     163      V     163          1.698
LGA    T     164      T     164          2.018
LGA    A     165      A     165          3.392
LGA    L     166      L     166          1.889
LGA    E     167      E     167          1.956
LGA    Y     168      Y     168          3.678
LGA    A     169      A     169          3.587
LGA    T     170      T     170          2.467
LGA    D     171      D     171          5.487
LGA    T     172      T     172          4.634
LGA    K     173      K     173          3.014
LGA    A     174      A     174          1.840
LGA    M     175      M     175          5.603
LGA    V     176      V     176          3.716
LGA    V     177      V     177          7.976
LGA    G     178      G     178          3.540

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  104  104    4.0     73    2.86    53.125    48.701     2.468

LGA_LOCAL      RMSD =  2.857  Number of atoms =   73  DIST =   4.00
LGA_ALL_ATOMS  RMSD =  3.783  Number of atoms =  104 
Std_ALL_ATOMS  RMSD =  3.738  (standard rmsd on all 104 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.944281 * X  +   0.070191 * Y  +   0.321569 * Z  +  28.850597
  Y_new =  -0.049393 * X  +  -0.935714 * Y  +   0.349285 * Z  +  31.573187
  Z_new =   0.325413 * X  +  -0.345707 * Y  +  -0.880110 * Z  +  84.951706 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.767309    0.374284  [ DEG:  -158.5551     21.4449 ]
  Theta =  -0.331449   -2.810144  [ DEG:   -18.9906   -161.0094 ]
  Phi   =  -0.052260    3.089333  [ DEG:    -2.9943    177.0057 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0341TS168_5-D2                               
REMARK     2: T0341_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0341TS168_5-D2.T0341_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  104  104   4.0   73   2.86  48.701     3.74
REMARK  ---------------------------------------------------------- 
MOLECULE T0341TS168_5-D2
PFRMAT TS
TARGET T0341
MODEL 5
PARENT N/A
ATOM     75  CA  SER    75      21.584  29.020  87.228  1.00 25.00           C
ATOM     76  CA  LEU    76      18.823  27.514  85.042  1.00 25.00           C
ATOM     77  CA  THR    77      16.302  27.932  87.894  1.00 25.00           C
ATOM     78  CA  ALA    78      17.371  31.583  88.336  1.00 25.00           C
ATOM     79  CA  ALA    79      16.955  32.187  84.578  1.00 25.00           C
ATOM     80  CA  ARG    80      13.464  30.616  84.687  1.00 25.00           C
ATOM     81  CA  ASN    81      12.526  32.848  87.655  1.00 25.00           C
ATOM     82  CA  LEU    82      13.777  35.934  85.761  1.00 25.00           C
ATOM     83  CA  ILE    83      11.714  34.920  82.698  1.00 25.00           C
ATOM     84  CA  GLU    84       8.614  34.476  84.902  1.00 25.00           C
ATOM     85  CA  GLN    85       9.187  37.934  86.446  1.00 25.00           C
ATOM     86  CA  LYS    86       8.541  39.091  82.844  1.00 25.00           C
ATOM     87  CA  GLN    87       6.337  39.000  79.745  1.00 25.00           C
ATOM     88  CA  VAL    88       5.657  35.338  78.843  1.00 25.00           C
ATOM     89  CA  ARG    89       7.618  32.190  79.715  1.00 25.00           C
ATOM     90  CA  PRO    90      10.472  29.722  79.860  1.00 25.00           C
ATOM     91  CA  MET    91      13.770  27.796  79.342  1.00 25.00           C
ATOM     92  CA  LEU    92      16.643  25.674  78.051  1.00 25.00           C
ATOM     93  CA  LEU    93      19.097  24.685  75.314  1.00 25.00           C
ATOM     94  CA  LEU    94      21.981  24.185  77.822  1.00 25.00           C
ATOM     95  CA  ASP    95      22.637  20.924  79.683  1.00 25.00           C
ATOM     96  CA  ASP    96      22.403  17.221  80.439  1.00 25.00           C
ATOM     97  CA  ARG    97      19.658  16.951  83.040  1.00 25.00           C
ATOM     98  CA  ALA    98      19.000  19.932  85.351  1.00 25.00           C
ATOM     99  CA  LEU    99      17.860  22.032  82.358  1.00 25.00           C
ATOM    100  CA  PRO   100      15.513  19.218  81.245  1.00 25.00           C
ATOM    101  CA  GLU   101      14.067  18.992  84.784  1.00 25.00           C
ATOM    102  CA  PHE   102      13.514  22.782  84.827  1.00 25.00           C
ATOM    103  CA  THR   103       9.732  22.691  84.592  1.00 25.00           C
ATOM    104  CA  GLY   104       8.050  20.104  82.405  1.00 25.00           C
ATOM    105  CA  VAL   105       9.293  22.109  79.409  1.00 25.00           C
ATOM    106  CA  GLN   106       6.219  22.964  77.388  1.00 25.00           C
ATOM    107  CA  THR   107       5.947  24.606  73.915  1.00 25.00           C
ATOM    108  CA  GLN   108       8.219  25.276  70.955  1.00 25.00           C
ATOM    109  CA  ASP   109       8.891  28.940  71.894  1.00 25.00           C
ATOM    110  CA  PRO   110      11.240  28.700  74.928  1.00 25.00           C
ATOM    111  CA  ASN   111      12.480  32.114  75.942  1.00 25.00           C
ATOM    112  CA  ALA   112      15.079  33.765  78.222  1.00 25.00           C
ATOM    113  CA  VAL   113      17.655  31.153  79.093  1.00 25.00           C
ATOM    114  CA  VAL   114      20.556  29.141  77.721  1.00 25.00           C
ATOM    115  CA  ILE   115      24.024  29.964  76.347  1.00 25.00           C
ATOM    116  CA  GLY   116      26.272  26.863  76.139  1.00 25.00           C
ATOM    117  CA  LEU   117      26.768  24.631  79.211  1.00 25.00           C
ATOM    118  CA  ALA   118      27.467  21.975  76.574  1.00 25.00           C
ATOM    119  CA  PRO   119      28.534  19.615  79.381  1.00 25.00           C
ATOM    120  CA  GLU   120      28.936  16.182  77.660  1.00 25.00           C
ATOM    121  CA  HIS   121      25.831  14.272  76.519  1.00 25.00           C
ATOM    122  CA  PHE   122      26.762  15.715  73.104  1.00 25.00           C
ATOM    123  CA  HIS   123      28.277  16.362  69.675  1.00 25.00           C
ATOM    124  CA  TYR   124      25.006  14.932  68.362  1.00 25.00           C
ATOM    125  CA  GLN   125      21.268  15.010  69.190  1.00 25.00           C
ATOM    126  CA  LEU   126      21.905  17.602  71.936  1.00 25.00           C
ATOM    127  CA  LEU   127      23.926  19.740  69.485  1.00 25.00           C
ATOM    128  CA  ASN   128      21.090  19.521  66.918  1.00 25.00           C
ATOM    129  CA  GLN   129      18.558  20.576  69.591  1.00 25.00           C
ATOM    130  CA  ALA   130      20.777  23.544  70.557  1.00 25.00           C
ATOM    131  CA  PHE   131      21.042  24.574  66.878  1.00 25.00           C
ATOM    132  CA  ARG   132      17.235  24.364  66.520  1.00 25.00           C
ATOM    133  CA  LEU   133      16.796  26.522  69.653  1.00 25.00           C
ATOM    134  CA  LEU   134      19.259  29.099  68.252  1.00 25.00           C
ATOM    135  CA  LEU   135      17.347  29.161  64.935  1.00 25.00           C
ATOM    136  CA  ASP   136      13.648  29.299  64.204  1.00 25.00           C
ATOM    137  CA  GLY   137      13.446  31.878  66.933  1.00 25.00           C
ATOM    138  CA  ALA   138      14.265  30.797  70.538  1.00 25.00           C
ATOM    139  CA  PRO   139      15.603  33.786  72.391  1.00 25.00           C
ATOM    140  CA  LEU   140      18.960  32.822  73.890  1.00 25.00           C
ATOM    141  CA  ILE   141      21.002  34.290  76.763  1.00 25.00           C
ATOM    142  CA  ALA   142      22.851  33.447  79.899  1.00 25.00           C
ATOM    143  CA  ILE   143      23.865  30.143  81.425  1.00 25.00           C
ATOM    144  CA  HIS   144      27.434  29.122  80.709  1.00 25.00           C
ATOM    145  CA  LYS   145      30.797  27.749  79.478  1.00 25.00           C
ATOM    146  CA  ALA   146      33.933  28.747  77.591  1.00 25.00           C
ATOM    147  CA  ARG   147      34.458  25.043  76.902  1.00 25.00           C
ATOM    148  CA  TYR   148      32.898  22.255  78.864  1.00 25.00           C
ATOM    149  CA  TYR   149      33.965  20.255  81.858  1.00 25.00           C
ATOM    150  CA  LYS   150      37.584  19.791  82.928  1.00 25.00           C
ATOM    151  CA  ARG   151      38.325  16.118  83.563  1.00 25.00           C
ATOM    152  CA  LYS   152      40.342  13.004  84.449  1.00 25.00           C
ATOM    153  CA  ASP   153      42.145  12.999  81.163  1.00 25.00           C
ATOM    154  CA  GLY   154      42.327  16.664  80.199  1.00 25.00           C
ATOM    155  CA  LEU   155      40.090  17.936  77.348  1.00 25.00           C
ATOM    156  CA  ALA   156      36.415  16.823  77.109  1.00 25.00           C
ATOM    157  CA  LEU   157      35.506  19.751  74.860  1.00 25.00           C
ATOM    158  CA  GLY   158      32.599  21.805  73.527  1.00 25.00           C
ATOM    159  CA  PRO   159      30.135  24.640  73.150  1.00 25.00           C
ATOM    160  CA  GLY   160      30.349  28.336  74.127  1.00 25.00           C
ATOM    161  CA  PRO   161      32.090  29.137  70.811  1.00 25.00           C
ATOM    162  CA  PHE   162      29.362  27.254  68.894  1.00 25.00           C
ATOM    163  CA  VAL   163      26.657  29.198  70.784  1.00 25.00           C
ATOM    164  CA  THR   164      28.415  32.498  69.953  1.00 25.00           C
ATOM    165  CA  ALA   165      28.599  31.498  66.261  1.00 25.00           C
ATOM    166  CA  LEU   166      24.868  30.636  66.282  1.00 25.00           C
ATOM    167  CA  GLU   167      24.068  34.027  67.875  1.00 25.00           C
ATOM    168  CA  TYR   168      26.168  35.802  65.209  1.00 25.00           C
ATOM    169  CA  ALA   169      24.326  33.886  62.450  1.00 25.00           C
ATOM    170  CA  THR   170      20.957  34.868  63.983  1.00 25.00           C
ATOM    171  CA  ASP   171      19.568  37.962  65.685  1.00 25.00           C
ATOM    172  CA  THR   172      18.475  35.441  68.314  1.00 25.00           C
ATOM    173  CA  LYS   173      21.079  37.061  70.542  1.00 25.00           C
ATOM    174  CA  ALA   174      23.591  36.921  73.381  1.00 25.00           C
ATOM    175  CA  MET   175      24.726  33.244  73.325  1.00 25.00           C
ATOM    176  CA  VAL   176      26.482  34.411  76.490  1.00 25.00           C
ATOM    177  CA  VAL   177      29.184  32.642  78.520  1.00 25.00           C
ATOM    178  CA  GLY   178      28.272  33.608  82.063  1.00 25.00           C
TER
END
