
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  117 (  117),  selected  109 , name T0350TS393_1
# Molecule2: number of CA atoms  109 ( 1798),  selected  109 , name T0350.pdb
# PARAMETERS: T0350TS393_1.T0350.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    39        69 - 107         4.83    14.26
  LCS_AVERAGE:     31.66

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23        34 - 56          1.98    19.61
  LCS_AVERAGE:     14.97

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    18        35 - 52          0.88    19.74
  LCS_AVERAGE:      8.89

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  109
LCS_GDT     M       1     M       1      3    5   29     3    3    4    4    5    6    8   10   12   17   21   25   29   32   33   35   40   42   48   59 
LCS_GDT     N       2     N       2      3    5   35     3    3    4    4    5    6    8   10   12   15   20   25   29   32   35   40   47   53   58   63 
LCS_GDT     I       3     I       3      4    6   35     3    3    4    4    7   11   17   22   22   25   27   29   33   35   39   42   50   59   62   65 
LCS_GDT     E       4     E       4      4   14   35     3    3    5   12   16   19   21   23   25   26   27   30   33   34   39   42   45   50   58   61 
LCS_GDT     R       5     R       5      4   18   35     3    3    9   14   16   19   21   23   25   26   28   31   33   35   41   44   48   51   55   61 
LCS_GDT     L       6     L       6      4   18   35     3    3    6    9   14   18   21   23   25   26   29   31   34   41   45   48   50   59   62   65 
LCS_GDT     T       7     T       7      5   19   35     3    7   11   14   18   19   21   23   25   28   29   32   38   42   45   50   57   60   62   65 
LCS_GDT     T       8     T       8      5   19   35     5    6   11   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     L       9     L       9      5   19   35     5    6   10   14   16   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     Q      10     Q      10      5   19   35     5    6   10   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     P      11     P      11     13   19   35     5   11   13   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     V      12     V      12     13   19   35     5   11   13   13   18   19   21   23   25   28   29   32   38   42   45   50   57   60   62   65 
LCS_GDT     W      13     W      13     13   19   35     4   11   13   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     D      14     D      14     13   19   35     5   11   13   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     R      15     R      15     13   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     Y      16     Y      16     13   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     D      17     D      17     13   19   35     5   11   13   14   18   19   21   23   25   27   29   33   38   40   45   50   57   60   62   65 
LCS_GDT     T      18     T      18     13   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     Q      19     Q      19     13   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     I      20     I      20     13   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     H      21     H      21     13   19   35     5   11   13   14   18   19   21   23   25   26   29   31   34   38   44   50   57   60   62   65 
LCS_GDT     N      22     N      22     13   19   35     5   11   13   14   18   19   21   23   25   28   29   31   34   38   44   50   57   60   62   65 
LCS_GDT     Q      23     Q      23     13   19   35     3    4    5   10   13   17   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     K      24     K      24      5   19   35     5   11   13   14   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     D      25     D      25      5   19   35     4    4    6   14   16   18   21   23   24   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     N      26     N      26      5   17   35     4    5   10   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     D      27     D      27      4   10   35     4    5   10   13   18   19   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     N      28     N      28      4   10   35     4    4    6    7    8   12   20   23   25   28   29   32   38   42   45   48   53   60   62   65 
LCS_GDT     E      29     E      29      3   10   35     3    4    6    7    8   13   19   23   25   28   29   32   38   42   45   50   57   60   62   65 
LCS_GDT     V      30     V      30      3   10   35     3    3    5    7    8   14   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     P      31     P      31      4   10   35     3    4    6   10   13   15   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     V      32     V      32      4   10   35     3    4    4    7   10   15   17   22   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     H      33     H      33      4   21   35     3    4    8   10   13   15   21   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     Q      34     Q      34      4   23   35     3    4    8   16   20   22   22   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     V      35     V      35     18   23   35     3    4   17   20   20   22   22   23   25   28   29   33   38   42   45   50   57   60   62   65 
LCS_GDT     S      36     S      36     18   23   35     7   15   17   20   20   22   22   23   25   27   28   33   38   42   45   49   52   56   60   65 
LCS_GDT     Y      37     Y      37     18   23   35     3   15   17   20   20   22   22   23   25   27   28   32   38   42   45   49   52   56   58   62 
LCS_GDT     T      38     T      38     18   23   35     3   15   17   20   20   22   22   23   25   27   28   30   36   42   45   49   52   56   58   62 
LCS_GDT     N      39     N      39     18   23   35     5    8   17   20   20   22   22   23   25   27   28   32   38   42   45   49   52   56   60   65 
LCS_GDT     L      40     L      40     18   23   35     5   15   17   20   20   22   22   23   25   27   28   33   38   42   45   49   52   58   62   65 
LCS_GDT     A      41     A      41     18   23   29     7   15   17   20   20   22   22   23   25   27   28   32   38   42   45   49   52   56   58   62 
LCS_GDT     E      42     E      42     18   23   29     5   15   17   20   20   22   22   23   26   30   31   33   36   42   45   49   52   56   58   62 
LCS_GDT     M      43     M      43     18   23   29     7   15   17   20   20   22   22   23   26   30   32   34   38   42   45   49   52   56   58   64 
LCS_GDT     V      44     V      44     18   23   29     7   15   17   20   20   22   22   23   25   27   28   33   38   42   45   49   52   56   60   65 
LCS_GDT     G      45     G      45     18   23   29     6   15   17   20   20   22   22   23   25   27   28   29   35   42   45   49   52   56   58   60 
LCS_GDT     E      46     E      46     18   23   29     7   15   17   20   20   22   22   23   25   27   28   29   33   40   43   48   52   56   58   60 
LCS_GDT     M      47     M      47     18   23   29     7   15   17   20   20   22   22   23   25   27   28   30   35   40   45   49   52   56   58   62 
LCS_GDT     N      48     N      48     18   23   29     7   15   17   20   20   22   22   23   25   27   28   29   36   42   45   49   52   56   58   60 
LCS_GDT     K      49     K      49     18   23   29     7   15   17   20   20   22   22   23   25   27   28   29   33   39   43   47   52   56   58   60 
LCS_GDT     L      50     L      50     18   23   29     7   15   17   20   20   22   22   23   25   27   28   29   30   34   40   45   50   54   58   60 
LCS_GDT     L      51     L      51     18   23   29     5   15   17   20   20   22   22   23   25   27   28   29   33   39   43   49   52   56   58   60 
LCS_GDT     E      52     E      52     18   23   29     6   13   17   20   20   22   22   23   25   27   28   29   33   40   43   48   52   56   58   60 
LCS_GDT     P      53     P      53     14   23   29     4    6   11   20   20   22   22   23   25   27   28   29   30   32   40   45   49   53   58   60 
LCS_GDT     S      54     S      54     14   23   29     4    6   11   20   20   22   22   23   24   26   28   29   30   32   40   43   49   53   58   60 
LCS_GDT     Q      55     Q      55      5   23   29     3    5    7   11   16   22   22   23   24   25   28   29   30   32   35   39   45   50   56   59 
LCS_GDT     V      56     V      56      4   23   29     3    3    4    6    9   11   13   23   24   25   28   29   30   32   35   39   46   50   57   60 
LCS_GDT     H      57     H      57      3    7   29     3    4    6    7    8    9   11   16   22   24   26   29   32   35   38   45   49   55   60   65 
LCS_GDT     L      58     L      58      3    7   29     3    6    6   15   16   19   24   26   30   31   31   33   35   38   42   47   55   60   62   65 
LCS_GDT     K      59     K      59      3    7   29     3    4   13   17   23   27   28   30   30   31   33   35   36   39   44   50   57   60   62   65 
LCS_GDT     F      60     F      60      4    7   29     3    4   17   19   23   24   28   30   30   31   33   35   36   39   44   50   57   60   62   65 
LCS_GDT     E      61     E      61      4    7   28     3    4    6    7    8    9   11   15   23   29   33   35   36   39   44   50   57   60   62   65 
LCS_GDT     L      62     L      62      4    7   28     3    4    5    6    8    9   15   16   18   23   28   30   34   39   42   47   57   60   62   65 
LCS_GDT     H      63     H      63      4    7   26     3    4    6    8   11   12   18   23   25   26   27   30   32   34   39   42   48   56   61   63 
LCS_GDT     D      64     D      64      4    7   24     3    3    4    8   11   12   17   22   24   25   27   30   32   34   39   42   48   57   61   63 
LCS_GDT     K      65     K      65      4    7   24     3    3    5    6    8   12   15   21   25   26   27   28   30   34   39   42   45   48   51   58 
LCS_GDT     L      66     L      66      5    9   21     3    3    6    8    8    8    9    9   11   15   18   22   26   28   30   34   38   41   44   46 
LCS_GDT     N      67     N      67      5    9   24     3    4    6    8    8    8    9   10   13   15   18   23   26   30   33   35   36   38   43   60 
LCS_GDT     E      68     E      68      5    9   38     3    4    6    8    8    8    9    9   13   16   21   25   29   32   33   37   43   56   61   63 
LCS_GDT     Y      69     Y      69      5    9   39     3    4    6    8    8   10   12   14   18   19   23   33   36   39   42   50   57   60   62   65 
LCS_GDT     Y      70     Y      70      5    9   39     3    4    6    8    8   10   12   15   28   30   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     V      71     V      71      4    9   39     3    3   12   21   26   27   28   30   30   31   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     K      72     K      72      4    9   39     3    6   16   21   26   27   28   30   30   31   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     V      73     V      73      5    9   39     3    6   12   18   26   27   28   30   30   31   33   35   36   39   42   47   57   60   62   65 
LCS_GDT     I      74     I      74      5    9   39     3    9   12   18   26   27   28   30   30   31   32   35   36   39   42   47   57   60   62   65 
LCS_GDT     E      75     E      75      5    6   39     3    6    6   11   26   27   28   30   30   31   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     D      76     D      76      5    6   39     3    6    6   21   26   27   28   30   30   31   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     S      77     S      77      5    6   39     3    6    6    6   11   19   28   30   30   31   33   35   36   39   42   47   49   56   59   64 
LCS_GDT     T      78     T      78      4    6   39     3    4    5    7   12   19   24   25   28   30   31   35   36   39   41   47   48   50   56   62 
LCS_GDT     N      79     N      79      5    7   39     3    4    5    9   19   24   25   27   28   31   33   35   36   39   42   47   49   53   56   63 
LCS_GDT     E      80     E      80      5    7   39     3    4    5    7   10   16   20   25   27   30   31   35   36   39   42   47   49   50   54   63 
LCS_GDT     V      81     V      81      5    7   39     3    4    5    7    7   11   15   20   23   28   31   33   36   39   42   47   49   50   56   63 
LCS_GDT     I      82     I      82      5    7   39     3    4    5    7    8   11   15   20   26   30   31   34   36   39   42   47   49   57   61   64 
LCS_GDT     R      83     R      83      5   22   39     3    4    5    7    8   11   17   21   28   30   33   35   36   39   42   47   55   60   62   65 
LCS_GDT     E      84     E      84      4   22   39     3    4    5    8   21   24   27   30   30   31   33   35   36   39   42   47   49   56   61   65 
LCS_GDT     I      85     I      85      6   22   39     7   11   18   21   26   27   28   30   30   31   33   35   36   39   42   47   49   53   56   64 
LCS_GDT     P      86     P      86      6   22   39     7   11   18   21   26   27   28   30   30   31   33   35   36   39   42   47   49   53   56   64 
LCS_GDT     P      87     P      87     14   22   39     4    8   16   21   26   27   28   30   30   31   33   35   36   39   42   47   49   53   56   64 
LCS_GDT     K      88     K      88     14   22   39     4    5   10   20   26   27   28   30   30   31   33   35   36   39   42   47   49   53   56   64 
LCS_GDT     R      89     R      89     16   22   39     7   13   18   21   26   27   28   30   30   31   33   35   36   39   42   47   49   50   55   63 
LCS_GDT     W      90     W      90     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   42   47   49   50   56   65 
LCS_GDT     L      91     L      91     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   42   47   49   50   62   65 
LCS_GDT     D      92     D      92     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   42   47   53   60   62   65 
LCS_GDT     F      93     F      93     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   42   47   57   60   62   65 
LCS_GDT     Y      94     Y      94     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   42   50   57   60   62   65 
LCS_GDT     A      95     A      95     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   43   50   57   60   62   65 
LCS_GDT     A      96     A      96     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   36   39   43   50   57   60   62   65 
LCS_GDT     M      97     M      97     16   22   39     7   13   18   21   26   27   28   30   30   31   33   35   36   39   44   50   57   60   62   65 
LCS_GDT     T      98     T      98     16   22   39     8   13   18   21   26   27   28   30   30   31   33   35   38   40   45   50   57   60   62   65 
LCS_GDT     E      99     E      99     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   38   42   45   50   57   60   62   65 
LCS_GDT     F     100     F     100     16   22   39     9   13   18   21   26   27   28   30   30   31   33   35   38   39   44   50   57   60   62   65 
LCS_GDT     L     101     L     101     16   22   39     4   13   18   21   26   27   28   30   30   31   33   35   38   39   44   50   57   60   62   65 
LCS_GDT     G     102     G     102     16   22   39     4   13   18   21   26   27   28   30   30   31   33   35   38   42   45   50   57   60   62   65 
LCS_GDT     L     103     L     103     16   22   39     4   13   18   21   26   27   28   30   30   31   33   35   38   42   45   50   57   60   62   65 
LCS_GDT     F     104     F     104     16   22   39     4   10   18   21   26   27   28   30   30   31   33   35   38   39   43   49   57   60   62   65 
LCS_GDT     V     105     V     105      4   22   39     3    4    6   11   16   21   26   28   30   31   33   35   38   42   45   50   57   60   62   65 
LCS_GDT     D     106     D     106      4    6   39     3    4    4    7    8    8   15   17   21   26   28   33   38   42   45   50   57   60   62   65 
LCS_GDT     E     107     E     107      4    6   39     3    4    4    7    8   12   14   17   20   26   28   31   36   39   44   50   57   60   62   65 
LCS_GDT     K     108     K     108      4    6   27     3    4    6    7    9    9   11   15   18   23   28   30   34   38   44   50   57   60   62   65 
LCS_GDT     K     109     K     109      3    5   27     3    3    3    7    8    8   11   12   25   28   29   31   34   38   44   50   57   60   62   65 
LCS_AVERAGE  LCS_A:  18.51  (   8.89   14.97   31.66 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      9     15     18     21     26     27     28     30     30     31     33     35     38     42     45     50     57     60     62     65 
GDT PERCENT_CA   8.26  13.76  16.51  19.27  23.85  24.77  25.69  27.52  27.52  28.44  30.28  32.11  34.86  38.53  41.28  45.87  52.29  55.05  56.88  59.63
GDT RMS_LOCAL    0.27   0.68   0.97   1.22   1.59   1.68   1.82   2.03   2.03   2.22   2.97   3.47   4.79   5.12   5.30   6.40   6.87   6.98   7.17   7.34
GDT RMS_ALL_CA  15.31  20.14  14.93  14.78  14.40  14.41  14.41  14.43  14.43  14.42  14.37  14.70  13.66  14.18  14.15  11.72  11.70  11.70  11.58  11.64

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1         26.766
LGA    N       2      N       2         25.721
LGA    I       3      I       3         22.825
LGA    E       4      E       4         28.599
LGA    R       5      R       5         28.471
LGA    L       6      L       6         22.103
LGA    T       7      T       7         19.518
LGA    T       8      T       8         18.751
LGA    L       9      L       9         16.569
LGA    Q      10      Q      10         18.778
LGA    P      11      P      11         16.214
LGA    V      12      V      12         15.736
LGA    W      13      W      13         14.672
LGA    D      14      D      14         16.083
LGA    R      15      R      15         14.957
LGA    Y      16      Y      16         15.427
LGA    D      17      D      17         17.514
LGA    T      18      T      18         17.793
LGA    Q      19      Q      19         16.650
LGA    I      20      I      20         19.347
LGA    H      21      H      21         22.090
LGA    N      22      N      22         21.503
LGA    Q      23      Q      23         21.790
LGA    K      24      K      24         18.517
LGA    D      25      D      25         17.050
LGA    N      26      N      26         15.319
LGA    D      27      D      27         14.763
LGA    N      28      N      28         15.923
LGA    E      29      E      29         14.955
LGA    V      30      V      30         16.530
LGA    P      31      P      31         14.766
LGA    V      32      V      32         13.460
LGA    H      33      H      33         15.227
LGA    Q      34      Q      34         17.089
LGA    V      35      V      35         15.866
LGA    S      36      S      36         16.154
LGA    Y      37      Y      37         16.300
LGA    T      38      T      38         12.780
LGA    N      39      N      39          9.940
LGA    L      40      L      40         11.772
LGA    A      41      A      41         12.665
LGA    E      42      E      42          9.503
LGA    M      43      M      43          8.062
LGA    V      44      V      44          9.762
LGA    G      45      G      45         12.699
LGA    E      46      E      46         12.222
LGA    M      47      M      47          9.864
LGA    N      48      N      48         13.430
LGA    K      49      K      49         17.047
LGA    L      50      L      50         15.715
LGA    L      51      L      51         14.989
LGA    E      52      E      52         19.106
LGA    P      53      P      53         22.178
LGA    S      54      S      54         19.569
LGA    Q      55      Q      55         19.571
LGA    V      56      V      56         17.639
LGA    H      57      H      57         12.606
LGA    L      58      L      58          5.738
LGA    K      59      K      59          2.916
LGA    F      60      F      60          3.412
LGA    E      61      E      61          9.841
LGA    L      62      L      62         12.772
LGA    H      63      H      63         19.455
LGA    D      64      D      64         22.520
LGA    K      65      K      65         28.286
LGA    L      66      L      66         28.612
LGA    N      67      N      67         23.297
LGA    E      68      E      68         16.907
LGA    Y      69      Y      69         10.970
LGA    Y      70      Y      70          7.543
LGA    V      71      V      71          1.991
LGA    K      72      K      72          1.417
LGA    V      73      V      73          2.920
LGA    I      74      I      74          3.563
LGA    E      75      E      75          2.767
LGA    D      76      D      76          2.726
LGA    S      77      S      77          3.739
LGA    T      78      T      78          9.084
LGA    N      79      N      79          7.324
LGA    E      80      E      80          9.977
LGA    V      81      V      81         10.536
LGA    I      82      I      82          8.674
LGA    R      83      R      83          6.634
LGA    E      84      E      84          3.501
LGA    I      85      I      85          1.076
LGA    P      86      P      86          0.780
LGA    P      87      P      87          1.228
LGA    K      88      K      88          2.061
LGA    R      89      R      89          1.410
LGA    W      90      W      90          1.971
LGA    L      91      L      91          2.047
LGA    D      92      D      92          1.062
LGA    F      93      F      93          0.943
LGA    Y      94      Y      94          1.654
LGA    A      95      A      95          1.442
LGA    A      96      A      96          0.977
LGA    M      97      M      97          1.122
LGA    T      98      T      98          1.021
LGA    E      99      E      99          0.913
LGA    F     100      F     100          0.550
LGA    L     101      L     101          0.967
LGA    G     102      G     102          1.165
LGA    L     103      L     103          1.317
LGA    F     104      F     104          1.705
LGA    V     105      V     105          6.514
LGA    D     106      D     106         12.604
LGA    E     107      E     107         13.874
LGA    K     108      K     108         19.249
LGA    K     109      K     109         18.278

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  117  109    4.0     30    2.03    26.606    23.528     1.411

LGA_LOCAL      RMSD =  2.027  Number of atoms =   30  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 14.465  Number of atoms =  109 
Std_ALL_ATOMS  RMSD = 11.323  (standard rmsd on all 109 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.505958 * X  +  -0.156362 * Y  +   0.848267 * Z  +  -0.071978
  Y_new =  -0.177916 * X  +  -0.943366 * Y  +  -0.280012 * Z  +  -0.119708
  Z_new =   0.844010 * X  +  -0.292594 * Y  +   0.449484 * Z  + -18.574173 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.577046    2.564546  [ DEG:   -33.0623    146.9377 ]
  Theta =  -1.004716   -2.136877  [ DEG:   -57.5660   -122.4340 ]
  Phi   =  -2.803457    0.338136  [ DEG:  -160.6262     19.3738 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0350TS393_1                                  
REMARK     2: T0350.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0350TS393_1.T0350.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  117  109   4.0   30   2.03  23.528    11.32
REMARK  ---------------------------------------------------------- 
MOLECULE T0350TS393_1
PFRMAT TS
TARGET T0350
MODEL 1
PARENT N/A
ATOM      1  CA  MET     1      16.655 -15.941 -11.215  1.00 25.00           C
ATOM      2  CA  ASN     2      13.746 -15.189 -13.471  1.00 25.00           C
ATOM      3  CA  ILE     3      10.325 -15.591 -11.943  1.00 25.00           C
ATOM      4  CA  GLU     4       9.419 -18.624 -14.071  1.00 25.00           C
ATOM      5  CA  ARG     5       7.913 -19.004 -17.536  1.00 25.00           C
ATOM      6  CA  LEU     6       8.006 -15.194 -17.876  1.00 25.00           C
ATOM      7  CA  THR     7       5.078 -12.945 -17.271  1.00 25.00           C
ATOM      8  CA  THR     8       2.787 -13.132 -20.238  1.00 25.00           C
ATOM      9  CA  LEU     9      -0.472 -11.434 -21.157  1.00 25.00           C
ATOM     10  CA  GLN    10      -2.612 -14.397 -22.200  1.00 25.00           C
ATOM     11  CA  PRO    11      -5.203 -14.044 -19.422  1.00 25.00           C
ATOM     12  CA  VAL    12      -7.865 -12.001 -17.665  1.00 25.00           C
ATOM     13  CA  TRP    13      -6.061  -9.063 -19.273  1.00 25.00           C
ATOM     14  CA  ASP    14      -6.743  -9.381 -23.028  1.00 25.00           C
ATOM     15  CA  ARG    15     -10.034 -11.200 -22.301  1.00 25.00           C
ATOM     16  CA  TYR    16     -11.044  -8.442 -19.842  1.00 25.00           C
ATOM     17  CA  ASP    17     -10.237  -5.773 -22.468  1.00 25.00           C
ATOM     18  CA  THR    18     -12.342  -7.649 -25.059  1.00 25.00           C
ATOM     19  CA  GLN    19     -15.253  -7.859 -22.578  1.00 25.00           C
ATOM     20  CA  ILE    20     -14.972  -4.101 -21.893  1.00 25.00           C
ATOM     21  CA  HIS    21     -14.993  -3.389 -25.656  1.00 25.00           C
ATOM     22  CA  ASN    22     -18.102  -5.585 -26.079  1.00 25.00           C
ATOM     23  CA  GLN    23     -21.851  -5.712 -26.440  1.00 25.00           C
ATOM     24  CA  LYS    24     -22.598  -7.352 -23.110  1.00 25.00           C
ATOM     25  CA  ASP    25     -24.443  -9.974 -21.117  1.00 25.00           C
ATOM     26  CA  ASN    26     -24.442  -7.212 -18.450  1.00 25.00           C
ATOM     27  CA  ASP    27     -23.801  -7.301 -14.645  1.00 25.00           C
ATOM     28  CA  ASN    28     -25.904  -4.504 -13.053  1.00 25.00           C
ATOM     29  CA  GLU    29     -24.085  -1.229 -12.243  1.00 25.00           C
ATOM     30  CA  VAL    30     -20.650  -0.163 -11.070  1.00 25.00           C
ATOM     31  CA  PRO    31     -17.982   0.919 -13.566  1.00 25.00           C
ATOM     32  CA  VAL    32     -15.504   1.587 -16.405  1.00 25.00           C
ATOM     33  CA  HIS    33     -16.135   5.037 -17.865  1.00 25.00           C
ATOM     34  CA  GLN    34     -16.257   7.453 -20.848  1.00 25.00           C
ATOM     35  CA  VAL    35     -14.754   7.339 -24.357  1.00 25.00           C
ATOM     36  CA  SER    36     -15.264   6.999 -28.107  1.00 25.00           C
ATOM     37  CA  TYR    37     -12.438   5.627 -30.169  1.00 25.00           C
ATOM     38  CA  THR    38     -10.794   7.880 -32.794  1.00 25.00           C
ATOM     39  CA  ASN    39      -9.819  10.386 -30.068  1.00 25.00           C
ATOM     40  CA  LEU    40      -8.319   7.557 -27.968  1.00 25.00           C
ATOM     41  CA  ALA    41      -6.332   6.326 -31.002  1.00 25.00           C
ATOM     42  CA  GLU    42      -5.039   9.876 -31.627  1.00 25.00           C
ATOM     43  CA  MET    43      -3.992  10.167 -27.954  1.00 25.00           C
ATOM     44  CA  VAL    44      -2.165   6.810 -28.184  1.00 25.00           C
ATOM     45  CA  GLY    45      -0.363   7.978 -31.354  1.00 25.00           C
ATOM     46  CA  GLU    46       0.667  11.224 -29.602  1.00 25.00           C
ATOM     47  CA  MET    47       1.991   9.221 -26.618  1.00 25.00           C
ATOM     48  CA  ASN    48       3.984   6.965 -28.986  1.00 25.00           C
ATOM     49  CA  LYS    49       5.451  10.044 -30.726  1.00 25.00           C
ATOM     50  CA  LEU    50       6.432  11.524 -27.333  1.00 25.00           C
ATOM     51  CA  LEU    51       8.107   8.224 -26.349  1.00 25.00           C
ATOM     52  CA  GLU    52      10.028   8.183 -29.662  1.00 25.00           C
ATOM     53  CA  PRO    53      11.169  11.791 -29.073  1.00 25.00           C
ATOM     54  CA  SER    54      12.401  11.358 -25.540  1.00 25.00           C
ATOM     55  CA  GLN    55      16.157  10.751 -25.508  1.00 25.00           C
ATOM     56  CA  VAL    56      15.237   7.458 -27.178  1.00 25.00           C
ATOM     57  CA  HIS    57      17.181   5.811 -24.418  1.00 25.00           C
ATOM     58  CA  LEU    58      16.219   5.794 -20.694  1.00 25.00           C
ATOM     59  CA  LYS    59      13.725   8.645 -21.262  1.00 25.00           C
ATOM     60  CA  PHE    60      10.328   9.171 -19.533  1.00 25.00           C
ATOM     61  CA  GLU    61       7.549  11.005 -17.753  1.00 25.00           C
ATOM     62  CA  LEU    62       5.519   7.881 -16.744  1.00 25.00           C
ATOM     63  CA  HIS    63       2.413   9.602 -15.297  1.00 25.00           C
ATOM     64  CA  ASP    64       0.835  12.830 -16.363  1.00 25.00           C
ATOM     65  CA  LYS    65      -2.672  11.728 -15.229  1.00 25.00           C
ATOM     66  CA  LEU    66      -2.258   8.180 -16.535  1.00 25.00           C
ATOM     67  CA  ASN    67      -0.305   9.213 -19.633  1.00 25.00           C
ATOM     68  CA  GLU    68       2.659   7.599 -21.259  1.00 25.00           C
ATOM     69  CA  TYR    69       2.501   5.515 -24.415  1.00 25.00           C
ATOM     70  CA  TYR    70       5.899   4.112 -23.337  1.00 25.00           C
ATOM     71  CA  VAL    71       9.524   3.577 -24.422  1.00 25.00           C
ATOM     72  CA  LYS    72      12.781   2.490 -26.187  1.00 25.00           C
ATOM     73  CA  VAL    73      15.102   1.355 -23.383  1.00 25.00           C
ATOM     74  CA  ILE    74      18.455   0.993 -21.621  1.00 25.00           C
ATOM     75  CA  GLU    75      16.795   1.410 -18.247  1.00 25.00           C
ATOM     76  CA  ASP    76      18.745   3.953 -16.173  1.00 25.00           C
ATOM     77  CA  SER    77      18.007   3.936 -12.457  1.00 25.00           C
ATOM     78  CA  THR    78      17.122   7.335 -10.953  1.00 25.00           C
ATOM     79  CA  ASN    79      18.603   9.080 -14.050  1.00 25.00           C
ATOM     80  CA  GLU    80      15.388   7.934 -15.806  1.00 25.00           C
ATOM     81  CA  VAL    81      12.077   6.042 -15.872  1.00 25.00           C
ATOM     82  CA  ILE    82      11.063   3.837 -18.851  1.00 25.00           C
ATOM     83  CA  ARG    83       8.734   1.089 -20.070  1.00 25.00           C
ATOM     84  CA  GLU    84      10.792  -1.222 -22.295  1.00 25.00           C
ATOM     85  CA  ILE    85       9.855  -1.422 -25.946  1.00 25.00           C
ATOM     86  CA  PRO    86       7.655  -0.757 -28.926  1.00 25.00           C
ATOM     87  CA  PRO    87       4.034  -0.190 -29.892  1.00 25.00           C
ATOM     88  CA  LYS    88       1.266  -2.416 -28.459  1.00 25.00           C
ATOM     89  CA  ARG    89       3.782  -4.056 -26.081  1.00 25.00           C
ATOM     90  CA  TRP    90       4.997  -0.605 -24.948  1.00 25.00           C
ATOM     91  CA  LEU    91       1.380   0.492 -24.327  1.00 25.00           C
ATOM     92  CA  ASP    92       0.742  -2.683 -22.283  1.00 25.00           C
ATOM     93  CA  PHE    93       3.901  -2.021 -20.222  1.00 25.00           C
ATOM     94  CA  TYR    94       2.764   1.580 -19.589  1.00 25.00           C
ATOM     95  CA  ALA    95      -0.679   0.323 -18.479  1.00 25.00           C
ATOM     96  CA  ALA    96       0.975  -2.186 -16.105  1.00 25.00           C
ATOM     97  CA  MET    97       3.165   0.598 -14.648  1.00 25.00           C
ATOM     98  CA  THR    98       0.071   2.796 -14.136  1.00 25.00           C
ATOM     99  CA  GLU    99      -1.722  -0.095 -12.378  1.00 25.00           C
ATOM    100  CA  PHE   100       1.316  -0.634 -10.109  1.00 25.00           C
ATOM    101  CA  LEU   101       1.376   3.101  -9.262  1.00 25.00           C
ATOM    102  CA  GLY   102      -2.362   2.999  -8.433  1.00 25.00           C
ATOM    103  CA  LEU   103      -1.803  -0.045  -6.175  1.00 25.00           C
ATOM    104  CA  PHE   104       1.062   1.771  -4.397  1.00 25.00           C
ATOM    105  CA  VAL   105       4.647   2.341  -5.419  1.00 25.00           C
ATOM    106  CA  ASP   106       5.204  -0.883  -3.399  1.00 25.00           C
ATOM    107  CA  GLU   107       2.344  -2.811  -1.716  1.00 25.00           C
ATOM    108  CA  LYS   108       3.959  -2.288   1.717  1.00 25.00           C
ATOM    109  CA  LYS   109       0.624  -1.036   3.124  1.00 25.00           C
ATOM    110  CA  LEU   110      -1.269  -4.287   2.556  1.00 25.00           C
ATOM    111  CA  GLU   111      -4.906  -4.362   1.350  1.00 25.00           C
ATOM    112  CA  HIS   112      -7.433  -7.055   0.414  1.00 25.00           C
ATOM    113  CA  HIS   113      -6.881 -10.446   1.981  1.00 25.00           C
ATOM    114  CA  HIS   114      -3.962 -12.961   2.090  1.00 25.00           C
ATOM    115  CA  HIS   115      -2.466 -16.451   2.053  1.00 25.00           C
ATOM    116  CA  HIS   116      -3.942 -17.511  -1.293  1.00 25.00           C
ATOM    117  CA  HIS   117      -6.707 -16.720  -3.731  1.00 25.00           C
TER
END
