
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  117 (  117),  selected  109 , name T0350TS599_5
# Molecule2: number of CA atoms  109 ( 1798),  selected  109 , name T0350.pdb
# PARAMETERS: T0350TS599_5.T0350.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    41        69 - 109         4.84    19.41
  LCS_AVERAGE:     32.16

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    25        85 - 109         1.97    20.11
  LCS_AVERAGE:     15.37

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    19        35 - 53          0.91    19.64
  LCS_AVERAGE:     10.18

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  109
LCS_GDT     M       1     M       1      6    7   19     0    4    6    7    7    7   13   22   27   29   31   33   34   36   37   38   41   42   45   46 
LCS_GDT     N       2     N       2      6    7   19     4    5    6    7    7    7    9   10   12   13   18   19   20   27   30   32   38   41   45   46 
LCS_GDT     I       3     I       3      6    7   19     4    5    6    7    7    8    9   13   14   15   17   21   22   24   29   31   33   37   40   46 
LCS_GDT     E       4     E       4      6    7   19     4    5    6    7    7    7    8   10   13   14   15   17   19   20   21   24   28   36   38   41 
LCS_GDT     R       5     R       5      6    7   19     4    5    6    7    7    7   10   12   13   14   14   16   18   18   21   21   25   25   30   32 
LCS_GDT     L       6     L       6      6    7   19     4    5    6    7    8    9   10   12   13   15   15   19   21   24   29   31   33   36   40   45 
LCS_GDT     T       7     T       7      3   10   19     3    3    4    7    7    7   10   12   13   14   15   17   19   23   29   31   32   36   38   41 
LCS_GDT     T       8     T       8      3   10   19     3    3    3    5    9    9   10   12   13   14   15   17   19   20   29   31   33   36   38   41 
LCS_GDT     L       9     L       9      8   10   21     7    8    8    8    9    9   10   13   14   15   18   21   23   24   29   31   33   37   40   45 
LCS_GDT     Q      10     Q      10      8   10   21     7    8    8    8    9    9   10   13   14   15   18   21   23   26   29   31   33   37   40   45 
LCS_GDT     P      11     P      11      8   10   21     7    8    8    8    9    9   10   13   14   15   18   21   23   26   29   31   33   37   40   45 
LCS_GDT     V      12     V      12      8   10   21     7    8    8    8    9    9   10   13   14   15   18   21   23   26   29   31   33   36   40   45 
LCS_GDT     W      13     W      13      8   10   21     7    8    8    8    9    9   10   13   14   16   18   21   23   26   29   31   33   36   39   45 
LCS_GDT     D      14     D      14      8   10   21     7    8    8    8    9    9   10   13   14   16   18   21   23   26   29   31   33   36   40   45 
LCS_GDT     R      15     R      15      8   10   21     7    8    8    8    9    9   10   12   14   16   18   21   23   26   29   31   33   36   40   45 
LCS_GDT     Y      16     Y      16      8   10   21     6    8    8    8    9    9   10   12   13   16   18   20   22   26   27   28   30   31   34   40 
LCS_GDT     D      17     D      17      8   10   21     6    8    8    8    9    9   10   13   14   16   18   21   23   26   29   31   34   39   43   46 
LCS_GDT     T      18     T      18      8    9   21     6    8    8    8    8    9   10   13   14   16   18   21   23   26   33   36   39   42   45   46 
LCS_GDT     Q      19     Q      19      8    9   21     6    8    8    8    9    9   10   13   14   16   18   21   23   26   31   36   39   42   45   46 
LCS_GDT     I      20     I      20      8    9   21     6    8    8    8    8    9   10   11   14   16   18   21   23   26   28   36   39   42   45   46 
LCS_GDT     H      21     H      21      8    9   37     6    8    8    8    8    9   10   12   25   27   29   31   33   37   38   40   42   43   45   46 
LCS_GDT     N      22     N      22      8    9   37     4    8    8    8    8    9   15   18   26   27   29   32   34   37   39   40   42   43   45   46 
LCS_GDT     Q      23     Q      23      8    9   37     4    8    8    8    8   21   21   24   26   27   29   32   34   37   39   40   42   45   50   53 
LCS_GDT     K      24     K      24      3    4   37     3    3    4   14   22   23   23   25   27   30   31   33   34   37   39   42   46   48   51   53 
LCS_GDT     D      25     D      25      3    4   37     3    3    3    5    8   12   25   27   29   31   32   33   34   37   39   42   46   48   51   53 
LCS_GDT     N      26     N      26      3    4   37     3    9   12   17   19   22   26   27   29   31   32   33   34   37   39   43   47   50   52   53 
LCS_GDT     D      27     D      27      3    4   37     3   13   15   18   23   24   26   27   29   31   32   35   36   38   44   46   54   55   56   59 
LCS_GDT     N      28     N      28      3    4   37     3    3    7   12   13   18   18   26   28   31   32   40   41   42   45   50   54   55   56   59 
LCS_GDT     E      29     E      29      3    4   37     3    3    4    8    9   11   12   20   22   27   31   35   36   38   43   46   54   55   56   59 
LCS_GDT     V      30     V      30      3    4   37     3    3    3    4    6    8   10   13   22   25   31   33   34   36   40   43   47   50   52   55 
LCS_GDT     P      31     P      31      3    3   37     3    3    3    4   17   21   26   27   29   31   32   33   34   37   40   43   47   50   52   55 
LCS_GDT     V      32     V      32      3   24   37     3    3    5   13   21   24   26   27   29   31   32   33   34   37   40   43   45   49   52   53 
LCS_GDT     H      33     H      33      3   24   37     3    3    6    7   15   20   24   26   28   30   32   33   34   37   39   40   43   45   48   52 
LCS_GDT     Q      34     Q      34      4   24   37     3    9   14   18   23   24   26   27   29   31   32   33   34   37   39   40   42   44   47   48 
LCS_GDT     V      35     V      35     19   24   37     4   16   18   20   23   24   25   27   29   31   32   33   34   37   39   40   42   43   45   47 
LCS_GDT     S      36     S      36     19   24   37     6   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   46 
LCS_GDT     Y      37     Y      37     19   24   37     5   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   46 
LCS_GDT     T      38     T      38     19   24   37     6   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   46 
LCS_GDT     N      39     N      39     19   24   37     5   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   47 
LCS_GDT     L      40     L      40     19   24   37     5   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   46 
LCS_GDT     A      41     A      41     19   24   37     7   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   42   43   45   46 
LCS_GDT     E      42     E      42     19   24   37     7   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   43   46   49   51 
LCS_GDT     M      43     M      43     19   24   37     6   16   18   20   23   24   26   27   29   31   32   33   34   38   42   43   47   48   50   52 
LCS_GDT     V      44     V      44     19   24   37     7   16   18   20   23   24   26   27   29   31   32   33   34   37   39   40   43   46   49   52 
LCS_GDT     G      45     G      45     19   24   37     7   16   18   20   23   24   26   27   29   31   32   33   34   37   39   42   47   48   49   52 
LCS_GDT     E      46     E      46     19   24   37     7   16   18   20   23   24   26   27   29   31   32   34   38   40   42   44   47   50   51   53 
LCS_GDT     M      47     M      47     19   24   37     7   16   18   20   23   24   26   27   29   31   32   35   38   40   42   44   47   53   56   59 
LCS_GDT     N      48     N      48     19   24   37     7   16   18   20   23   24   26   27   29   31   32   35   38   40   42   44   47   50   53   56 
LCS_GDT     K      49     K      49     19   24   37     7   16   18   20   23   24   26   27   29   31   32   35   38   40   42   44   47   50   52   53 
LCS_GDT     L      50     L      50     19   24   37     7   16   18   20   23   24   26   27   29   31   32   35   38   40   47   50   54   55   56   59 
LCS_GDT     L      51     L      51     19   24   37     3   16   18   20   23   24   26   27   31   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      52     E      52     19   24   37     7   16   18   20   23   24   26   27   29   31   32   35   42   45   47   50   54   55   56   59 
LCS_GDT     P      53     P      53     19   24   37     3    9   16   20   23   24   26   27   29   31   32   33   34   37   39   43   49   51   52   59 
LCS_GDT     S      54     S      54     15   24   37     4    6   15   20   23   24   26   27   29   31   32   33   34   37   44   47   52   55   56   59 
LCS_GDT     Q      55     Q      55     12   24   37     4    4   12   20   23   24   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     V      56     V      56      9   22   37     4    8    9   12   15   19   25   30   33   36   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     H      57     H      57      9   11   37     5    8    9   10   15   20   25   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     L      58     L      58      9   11   37     3    8    9   12   17   21   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     K      59     K      59      9   11   33     5    8    9   10   17   21   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     F      60     F      60      9   11   33     5    8    9   10   10   12   18   22   25   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      61     E      61      9   11   33     5    8    9   10   10   12   18   22   25   29   32   35   43   47   49   50   54   55   56   59 
LCS_GDT     L      62     L      62      9   11   33     5    8    9   10   10   12   18   22   25   29   32   35   38   45   49   50   54   55   56   59 
LCS_GDT     H      63     H      63      9   11   33     4    8    9   10   10   12   18   22   25   29   31   35   38   40   42   44   48   53   56   59 
LCS_GDT     D      64     D      64      9   11   33     3    5    9   10   10   12   18   22   25   29   31   35   38   40   42   44   47   50   53   58 
LCS_GDT     K      65     K      65      7   11   33     3    5    9   10   10   12   18   21   25   29   31   35   38   40   42   44   47   50   52   54 
LCS_GDT     L      66     L      66      5   14   33     3    3    6    9   13   14   18   22   24   29   31   35   38   40   42   44   47   50   52   53 
LCS_GDT     N      67     N      67      7   14   33     3    5   10   12   13   14   15   22   24   25   31   34   38   40   42   44   47   50   52   53 
LCS_GDT     E      68     E      68      7   14   33     3    7   11   12   13   14   18   22   25   29   31   35   38   40   42   44   47   50   52   56 
LCS_GDT     Y      69     Y      69      9   14   41     3    7   11   12   13   14   18   22   25   29   31   35   38   40   42   44   47   50   56   59 
LCS_GDT     Y      70     Y      70     10   14   41     4    8   11   12   13   14   18   22   25   29   31   35   38   45   49   50   54   55   56   59 
LCS_GDT     V      71     V      71     10   14   41     4    8   11   12   13   14   18   22   25   29   33   42   45   47   49   50   54   55   56   59 
LCS_GDT     K      72     K      72     10   14   41     4    8   11   12   13   14   18   22   28   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     V      73     V      73     10   14   41     4    9   11   12   17   21   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     I      74     I      74     10   14   41     4    9   11   12   17   21   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      75     E      75     10   14   41     4    9   11   12   16   20   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     D      76     D      76     10   14   41     4    9   11   12   15   20   25   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     S      77     S      77     10   14   41     4    9   11   12   15   19   25   29   33   35   40   44   45   47   49   50   54   55   56   59 
LCS_GDT     T      78     T      78     10   14   41     4    9   10   12   14   19   25   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     N      79     N      79     10   14   41     4    9   10   12   12   16   23   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      80     E      80      9   14   41     4    9   10   12   12   16   23   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     V      81     V      81      9   14   41     3    9   10   12   12   21   25   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     I      82     I      82      4   13   41     3    7   11   12   13   14   18   22   25   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     R      83     R      83      4   10   41     3    3    4    6    6   11   15   17   26   33   40   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      84     E      84      8   20   41     7    7   10   12   16   21   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     I      85     I      85      8   25   41     7    7   10   12   18   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     P      86     P      86      8   25   41     7    7   10   17   20   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     P      87     P      87      8   25   41     7    7   12   17   20   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     K      88     K      88     15   25   41     7    7   10   15   19   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     R      89     R      89     16   25   41     7   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     W      90     W      90     17   25   41    11   14   17   20   21   23   26   30   34   36   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     L      91     L      91     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     D      92     D      92     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     F      93     F      93     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     Y      94     Y      94     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     A      95     A      95     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     A      96     A      96     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     M      97     M      97     17   25   41    11   14   16   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     T      98     T      98     17   25   41    11   14   17   20   23   24   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E      99     E      99     17   25   41    11   14   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     F     100     F     100     17   25   41    11   14   17   20   21   23   26   29   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     L     101     L     101     17   25   41     5   14   17   20   21   23   26   29   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     G     102     G     102     17   25   41     5   14   17   20   21   23   26   29   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     L     103     L     103     17   25   41     4   13   17   20   21   23   26   28   30   34   39   44   45   47   49   50   54   55   56   59 
LCS_GDT     F     104     F     104     17   25   41     4   10   17   20   21   23   26   27   29   32   35   39   45   47   49   50   54   55   56   59 
LCS_GDT     V     105     V     105     17   25   41     4    9   17   20   21   23   26   28   30   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     D     106     D     106     17   25   41     3   10   17   20   21   23   26   29   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     E     107     E     107     15   25   41     3    9   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     K     108     K     108      9   25   41     3    9   17   20   21   23   26   30   34   39   41   44   45   47   49   50   54   55   56   59 
LCS_GDT     K     109     K     109      8   25   41     3    4   13   19   21   23   26   28   31   39   41   44   45   47   49   50   54   55   56   59 
LCS_AVERAGE  LCS_A:  19.24  (  10.18   15.37   32.16 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     11     16     18     20     23     24     26     30     34     39     41     44     45     47     49     50     54     55     56     59 
GDT PERCENT_CA  10.09  14.68  16.51  18.35  21.10  22.02  23.85  27.52  31.19  35.78  37.61  40.37  41.28  43.12  44.95  45.87  49.54  50.46  51.38  54.13
GDT RMS_LOCAL    0.31   0.65   0.72   1.01   1.38   1.50   2.05   2.87   3.14   3.69   3.75   3.93   4.04   4.27   4.65   4.80   5.42   5.48   5.65   6.15
GDT RMS_ALL_CA  20.72  19.93  19.75  20.06  19.97  20.02  20.08  20.17  20.03  19.73  19.81  19.82  19.81  19.68  19.47  19.41  18.94  18.93  18.90  18.63

#      Molecule1      Molecule2       DISTANCE
LGA    M       1      M       1         24.837
LGA    N       2      N       2         26.395
LGA    I       3      I       3         27.716
LGA    E       4      E       4         29.965
LGA    R       5      R       5         29.853
LGA    L       6      L       6         30.142
LGA    T       7      T       7         33.485
LGA    T       8      T       8         31.002
LGA    L       9      L       9         28.998
LGA    Q      10      Q      10         34.134
LGA    P      11      P      11         32.072
LGA    V      12      V      12         29.242
LGA    W      13      W      13         34.093
LGA    D      14      D      14         36.854
LGA    R      15      R      15         32.996
LGA    Y      16      Y      16         34.645
LGA    D      17      D      17         36.162
LGA    T      18      T      18         36.132
LGA    Q      19      Q      19         31.731
LGA    I      20      I      20         29.941
LGA    H      21      H      21         33.045
LGA    N      22      N      22         32.340
LGA    Q      23      Q      23         26.913
LGA    K      24      K      24         22.447
LGA    D      25      D      25         23.551
LGA    N      26      N      26         19.305
LGA    D      27      D      27         12.441
LGA    N      28      N      28          9.743
LGA    E      29      E      29         12.572
LGA    V      30      V      30         16.692
LGA    P      31      P      31         16.704
LGA    V      32      V      32         20.549
LGA    H      33      H      33         27.040
LGA    Q      34      Q      34         31.476
LGA    V      35      V      35         30.638
LGA    S      36      S      36         36.807
LGA    Y      37      Y      37         39.487
LGA    T      38      T      38         38.144
LGA    N      39      N      39         30.890
LGA    L      40      L      40         29.640
LGA    A      41      A      41         31.772
LGA    E      42      E      42         28.460
LGA    M      43      M      43         21.424
LGA    V      44      V      44         22.543
LGA    G      45      G      45         24.550
LGA    E      46      E      46         19.365
LGA    M      47      M      47         13.825
LGA    N      48      N      48         16.327
LGA    K      49      K      49         17.465
LGA    L      50      L      50         11.101
LGA    L      51      L      51          7.106
LGA    E      52      E      52         11.455
LGA    P      53      P      53         13.132
LGA    S      54      S      54          7.915
LGA    Q      55      Q      55          3.818
LGA    V      56      V      56          3.957
LGA    H      57      H      57          2.360
LGA    L      58      L      58          2.673
LGA    K      59      K      59          4.003
LGA    F      60      F      60          7.372
LGA    E      61      E      61          9.988
LGA    L      62      L      62         13.417
LGA    H      63      H      63         17.124
LGA    D      64      D      64         21.352
LGA    K      65      K      65         24.537
LGA    L      66      L      66         25.576
LGA    N      67      N      67         25.585
LGA    E      68      E      68         20.202
LGA    Y      69      Y      69         17.317
LGA    Y      70      Y      70         12.190
LGA    V      71      V      71          9.317
LGA    K      72      K      72          7.120
LGA    V      73      V      73          3.885
LGA    I      74      I      74          2.145
LGA    E      75      E      75          0.397
LGA    D      76      D      76          1.777
LGA    S      77      S      77          4.279
LGA    T      78      T      78          3.679
LGA    N      79      N      79          3.970
LGA    E      80      E      80          3.697
LGA    V      81      V      81          3.885
LGA    I      82      I      82          5.978
LGA    R      83      R      83          5.713
LGA    E      84      E      84          2.586
LGA    I      85      I      85          2.698
LGA    P      86      P      86          2.194
LGA    P      87      P      87          2.963
LGA    K      88      K      88          3.219
LGA    R      89      R      89          3.145
LGA    W      90      W      90          3.842
LGA    L      91      L      91          3.592
LGA    D      92      D      92          1.463
LGA    F      93      F      93          1.569
LGA    Y      94      Y      94          2.143
LGA    A      95      A      95          1.046
LGA    A      96      A      96          2.086
LGA    M      97      M      97          2.630
LGA    T      98      T      98          1.775
LGA    E      99      E      99          3.572
LGA    F     100      F     100          5.227
LGA    L     101      L     101          5.395
LGA    G     102      G     102          4.726
LGA    L     103      L     103          7.412
LGA    F     104      F     104          9.628
LGA    V     105      V     105          8.316
LGA    D     106      D     106          6.292
LGA    E     107      E     107          1.790
LGA    K     108      K     108          3.721
LGA    K     109      K     109          7.423

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  117  109    4.0     30    2.87    26.606    24.557     1.009

LGA_LOCAL      RMSD =  2.872  Number of atoms =   30  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 20.188  Number of atoms =  109 
Std_ALL_ATOMS  RMSD = 14.501  (standard rmsd on all 109 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.854143 * X  +   0.515064 * Y  +  -0.071753 * Z  +  -1.914334
  Y_new =  -0.511560 * X  +  -0.856995 * Y  +  -0.062175 * Z  +   2.771721
  Z_new =  -0.093516 * X  +  -0.016400 * Y  +   0.995483 * Z  + -15.686207 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -0.016473    3.125119  [ DEG:    -0.9438    179.0562 ]
  Theta =   0.093653    3.047940  [ DEG:     5.3659    174.6341 ]
  Phi   =  -2.601971    0.539622  [ DEG:  -149.0819     30.9181 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0350TS599_5                                  
REMARK     2: T0350.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0350TS599_5.T0350.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  117  109   4.0   30   2.87  24.557    14.50
REMARK  ---------------------------------------------------------- 
MOLECULE T0350TS599_5
PFRMAT TS                                                                       
TARGET T0350                                                                    
MODEL  5                                                                        
PARENT N/A                                                                      
ATOM      1  CA  MET     1       0.037   7.367 -24.568  1.00  0.00              
ATOM      2  CA  ASN     2      -2.279   4.533 -25.905  1.00  0.00              
ATOM      3  CA  ILE     3      -4.892   3.658 -29.085  1.00  0.00              
ATOM      4  CA  GLU     4      -7.513   1.503 -26.636  1.00  0.00              
ATOM      5  CA  ARG     5      -7.980   4.658 -24.582  1.00  0.00              
ATOM      6  CA  LEU     6      -8.990   6.968 -27.468  1.00  0.00              
ATOM      7  CA  THR     7     -11.618   4.523 -28.793  1.00  0.00              
ATOM      8  CA  THR     8     -13.229   4.046 -25.361  1.00  0.00              
ATOM      9  CA  LEU     9     -13.617   7.785 -24.763  1.00  0.00              
ATOM     10  CA  GLN    10     -15.275   8.230 -28.155  1.00  0.00              
ATOM     11  CA  PRO    11     -17.862   5.507 -27.473  1.00  0.00              
ATOM     12  CA  VAL    12     -18.629   7.177 -24.128  1.00  0.00              
ATOM     13  CA  TRP    13     -18.964  10.558 -25.925  1.00  0.00              
ATOM     14  CA  ASP    14     -21.502   9.032 -28.267  1.00  0.00              
ATOM     15  CA  ARG    15     -23.593   7.516 -25.451  1.00  0.00              
ATOM     16  CA  TYR    16     -24.545  10.593 -23.526  1.00  0.00              
ATOM     17  CA  ASP    17     -21.695  11.904 -21.470  1.00  0.00              
ATOM     18  CA  THR    18     -23.394  11.463 -18.061  1.00  0.00              
ATOM     19  CA  GLN    19     -24.460   7.922 -18.924  1.00  0.00              
ATOM     20  CA  ILE    20     -20.981   6.767 -20.107  1.00  0.00              
ATOM     21  CA  HIS    21     -19.241   8.249 -17.105  1.00  0.00              
ATOM     22  CA  ASN    22     -21.685   6.487 -14.788  1.00  0.00              
ATOM     23  CA  GLN    23     -21.145   3.239 -16.729  1.00  0.00              
ATOM     24  CA  LYS    24     -17.396   3.471 -16.494  1.00  0.00              
ATOM     25  CA  ASP    25     -17.657   4.106 -12.753  1.00  0.00              
ATOM     26  CA  ASN    26     -19.920   1.198 -12.037  1.00  0.00              
ATOM     27  CA  ASP    27     -18.243  -1.010 -14.620  1.00  0.00              
ATOM     28  CA  ASN    28     -15.229  -0.598 -12.406  1.00  0.00              
ATOM     29  CA  GLU    29     -15.532  -0.187  -8.693  1.00  0.00              
ATOM     30  CA  VAL    30     -17.590  -3.036  -7.796  1.00  0.00              
ATOM     31  CA  PRO    31     -14.471  -4.488  -9.276  1.00  0.00              
ATOM     32  CA  VAL    32     -12.162  -2.412  -7.052  1.00  0.00              
ATOM     33  CA  HIS    33     -14.248  -2.846  -3.943  1.00  0.00              
ATOM     34  CA  GLN    34     -14.576  -6.567  -4.342  1.00  0.00              
ATOM     35  CA  VAL    35     -10.827  -7.260  -4.762  1.00  0.00              
ATOM     36  CA  SER    36     -10.220 -10.553  -2.875  1.00  0.00              
ATOM     37  CA  TYR    37      -7.199 -10.679  -0.513  1.00  0.00              
ATOM     38  CA  THR    38      -5.136 -13.025  -2.596  1.00  0.00              
ATOM     39  CA  ASN    39      -5.636 -10.985  -5.722  1.00  0.00              
ATOM     40  CA  LEU    40      -4.703  -7.825  -3.877  1.00  0.00              
ATOM     41  CA  ALA    41      -1.528  -9.211  -2.456  1.00  0.00              
ATOM     42  CA  GLU    42      -0.494 -10.439  -5.944  1.00  0.00              
ATOM     43  CA  MET    43      -1.277  -7.081  -7.411  1.00  0.00              
ATOM     44  CA  VAL    44       0.742  -5.197  -4.747  1.00  0.00              
ATOM     45  CA  GLY    45       3.724  -7.416  -5.516  1.00  0.00              
ATOM     46  CA  GLU    46       3.321  -6.595  -9.228  1.00  0.00              
ATOM     47  CA  MET    47       3.108  -2.868  -8.432  1.00  0.00              
ATOM     48  CA  ASN    48       6.223  -3.025  -6.300  1.00  0.00              
ATOM     49  CA  LYS    49       8.131  -4.609  -9.149  1.00  0.00              
ATOM     50  CA  LEU    50       6.860  -1.884 -11.519  1.00  0.00              
ATOM     51  CA  LEU    51       7.898   0.851  -9.076  1.00  0.00              
ATOM     52  CA  GLU    52      11.414  -0.425  -8.673  1.00  0.00              
ATOM     53  CA  PRO    53      11.986  -0.630 -12.394  1.00  0.00              
ATOM     54  CA  SER    54      10.559   2.932 -12.922  1.00  0.00              
ATOM     55  CA  GLN    55      12.762   4.321 -10.148  1.00  0.00              
ATOM     56  CA  VAL    56      15.935   3.307 -12.050  1.00  0.00              
ATOM     57  CA  HIS    57      15.555   6.498 -14.155  1.00  0.00              
ATOM     58  CA  LEU    58      11.937   7.359 -14.712  1.00  0.00              
ATOM     59  CA  LYS    59      10.822   9.554 -17.539  1.00  0.00              
ATOM     60  CA  PHE    60       7.223  10.885 -17.473  1.00  0.00              
ATOM     61  CA  GLU    61       5.484  11.953 -20.637  1.00  0.00              
ATOM     62  CA  LEU    62       2.136  13.606 -20.466  1.00  0.00              
ATOM     63  CA  HIS    63      -0.031  13.758 -23.441  1.00  0.00              
ATOM     64  CA  ASP    64      -2.333  16.738 -23.301  1.00  0.00              
ATOM     65  CA  LYS    65      -4.632  15.735 -26.053  1.00  0.00              
ATOM     66  CA  LEU    66      -5.378  12.310 -25.036  1.00  0.00              
ATOM     67  CA  ASN    67      -5.119  12.818 -21.226  1.00  0.00              
ATOM     68  CA  GLU    68      -2.878   9.806 -21.275  1.00  0.00              
ATOM     69  CA  TYR    69       0.222   9.381 -19.178  1.00  0.00              
ATOM     70  CA  TYR    70       3.220   7.709 -20.677  1.00  0.00              
ATOM     71  CA  VAL    71       5.960   6.427 -18.466  1.00  0.00              
ATOM     72  CA  LYS    72       9.311   5.607 -19.959  1.00  0.00              
ATOM     73  CA  VAL    73      11.776   3.630 -17.905  1.00  0.00              
ATOM     74  CA  ILE    74      15.431   4.204 -18.525  1.00  0.00              
ATOM     75  CA  GLU    75      18.260   2.999 -16.265  1.00  0.00              
ATOM     76  CA  ASP    76      20.571   6.021 -16.308  1.00  0.00              
ATOM     77  CA  SER    77      23.904   4.299 -16.243  1.00  0.00              
ATOM     78  CA  THR    78      23.409   1.836 -19.028  1.00  0.00              
ATOM     79  CA  ASN    79      20.292   3.054 -20.894  1.00  0.00              
ATOM     80  CA  GLU    80      18.985  -0.444 -21.011  1.00  0.00              
ATOM     81  CA  VAL    81      15.282  -0.450 -20.374  1.00  0.00              
ATOM     82  CA  ILE    82      14.463   2.206 -22.906  1.00  0.00              
ATOM     83  CA  ARG    83      16.509   0.555 -25.702  1.00  0.00              
ATOM     84  CA  GLU    84      14.998  -2.851 -25.257  1.00  0.00              
ATOM     85  CA  ILE    85      11.499  -1.886 -25.248  1.00  0.00              
ATOM     86  CA  PRO    86       9.296  -1.930 -28.305  1.00  0.00              
ATOM     87  CA  PRO    87       6.723   0.884 -27.850  1.00  0.00              
ATOM     88  CA  LYS    88       3.805  -1.484 -27.654  1.00  0.00              
ATOM     89  CA  ARG    89       5.251  -3.534 -24.852  1.00  0.00              
ATOM     90  CA  TRP    90       6.114  -0.532 -22.728  1.00  0.00              
ATOM     91  CA  LEU    91       2.672   0.945 -23.107  1.00  0.00              
ATOM     92  CA  ASP    92       1.012  -2.357 -22.165  1.00  0.00              
ATOM     93  CA  PHE    93       3.150  -2.711 -19.068  1.00  0.00              
ATOM     94  CA  TYR    94       2.332   0.872 -17.983  1.00  0.00              
ATOM     95  CA  ALA    95      -1.349   0.173 -18.597  1.00  0.00              
ATOM     96  CA  ALA    96      -1.358  -3.016 -16.550  1.00  0.00              
ATOM     97  CA  MET    97       0.370  -1.244 -13.673  1.00  0.00              
ATOM     98  CA  THR    98      -2.051   1.629 -13.768  1.00  0.00              
ATOM     99  CA  GLU    99      -5.098  -0.665 -13.756  1.00  0.00              
ATOM    100  CA  PHE   100      -3.732  -2.627 -10.768  1.00  0.00              
ATOM    101  CA  LEU   101      -2.570   0.093  -8.371  1.00  0.00              
ATOM    102  CA  GLY   102      -5.923   1.845  -9.064  1.00  0.00              
ATOM    103  CA  LEU   103      -8.088  -1.166  -8.434  1.00  0.00              
ATOM    104  CA  PHE   104      -6.622  -2.123  -5.125  1.00  0.00              
ATOM    105  CA  VAL   105      -5.796   1.248  -3.728  1.00  0.00              
ATOM    106  CA  ASP   106      -7.681   4.369  -3.362  1.00  0.00              
ATOM    107  CA  GLU   107      -7.457   6.902  -6.149  1.00  0.00              
ATOM    108  CA  LYS   108      -5.710   9.313  -3.805  1.00  0.00              
ATOM    109  CA  LYS   109      -2.705   7.026  -3.384  1.00  0.00              
ATOM    110  CA  LEU   110      -2.310   6.523  -7.119  1.00  0.00              
ATOM    111  CA  GLU   111      -2.617  10.210  -7.814  1.00  0.00              
ATOM    112  CA  HIS   112      -0.041  11.052  -5.224  1.00  0.00              
ATOM    113  CA  HIS   113       2.565   8.545  -6.475  1.00  0.00              
ATOM    114  CA  HIS   114       2.888  10.368  -9.763  1.00  0.00              
ATOM    115  CA  HIS   115       1.622   8.386 -12.433  1.00  0.00              
ATOM    116  CA  HIS   116       3.143  10.403 -15.816  1.00  0.00              
ATOM    117  CA  HIS   117       3.740  14.561 -16.151  1.00  0.00              
TER                                                                             
END
