
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms   78 (  312),  selected   78 , name T0352AL243_2
# Molecule2: number of CA atoms  109 ( 1766),  selected   78 , name T0352.pdb
# PARAMETERS: T0352AL243_2.T0352.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    21        12 - 36          4.81    29.71
  LCS_AVERAGE:     16.69

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    11        12 - 22          0.74    28.97
  LONGEST_CONTINUOUS_SEGMENT:    11        55 - 65          1.42    30.96
  LONGEST_CONTINUOUS_SEGMENT:    11        87 - 97          1.65    27.24
  LCS_AVERAGE:      7.17

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    11        12 - 22          0.74    28.97
  LCS_AVERAGE:      5.53

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  109
LCS_GDT     Q      12     Q      12     11   11   21     3    4    7   11   11   11   11   13   14   16   18   19   19   21   23   26   29   32   34   35 
LCS_GDT     A      13     A      13     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   21   26   29   32   34   35 
LCS_GDT     L      14     L      14     11   11   21    10   10   10   11   11   11   11   13   13   16   16   19   19   19   20   22   23   24   26   33 
LCS_GDT     E      15     E      15     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   23   26   29   32   34   35 
LCS_GDT     A      16     A      16     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   21   23   25   29   32   33 
LCS_GDT     L      17     L      17     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   24   26   30 
LCS_GDT     L      18     L      18     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   24   26   28 
LCS_GDT     R      19     R      19     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   25   27   30 
LCS_GDT     E      20     E      20     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   24   26   26 
LCS_GDT     H      21     H      21     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   24   26   26 
LCS_GDT     Q      22     Q      22     11   11   21    10   10   10   11   11   11   11   13   14   16   18   19   19   19   20   22   23   24   26   26 
LCS_GDT     R      25     R      25      0    0   21     0    0    2    3    5    7    9   13   14   16   18   19   19   19   20   22   23   24   26   28 
LCS_GDT     N      26     N      26      0    0   21     0    0    2    2    3    7    9   13   14   16   18   19   19   19   20   22   23   24   26   26 
LCS_GDT     P      29     P      29      4    6   21     3    3    4    5    6    7    8    8    9   10   11   13   17   18   20   22   24   26   27   27 
LCS_GDT     Q      30     Q      30      4    6   21     3    4    4    5    6    7    8   10   11   14   18   19   19   19   21   24   26   26   27   27 
LCS_GDT     P      31     P      31      4    6   21     3    4    4    5    6    7    8    9   11   12   13   16   18   19   21   24   26   26   27   27 
LCS_GDT     H      32     H      32      4    6   21     3    4    4    5    6    7    8    9   10   14   18   19   19   19   21   24   26   26   27   27 
LCS_GDT     Q      33     Q      33      4    6   21     3    4    4    5    6    6    8   11   14   16   18   19   19   19   21   24   26   26   30   33 
LCS_GDT     F      34     F      34      4    6   21     3    4    4    5    6    7    8   10   11   15   18   19   19   19   21   24   26   28   30   33 
LCS_GDT     N      35     N      35      3    5   21     3    3    4    5    5    6    8   11   14   16   18   19   19   22   23   26   29   32   34   35 
LCS_GDT     S      36     S      36      3    5   21     3    3    4    6    7   10   11   12   14   16   18   19   19   22   23   26   29   32   34   35 
LCS_GDT     T      37     T      37      3    5   17     0    2    3    5    6    7    8   10   11   12   15   17   18   19   22   26   29   32   34   35 
LCS_GDT     Q      38     Q      38      0    3   17     0    2    3    4    4    6    8   10   11   12   15   17   18   19   21   26   30   32   34   35 
LCS_GDT     M      42     M      42      0    3   17     0    1    1    2    2    3    8    9    9   11   12   14   17   19   21   24   26   33   34   36 
LCS_GDT     D      43     D      43      0    3   17     0    0    1    2    4    5    8    9    9   10   12   14   16   18   25   28   31   33   34   36 
LCS_GDT     T      44     T      44      4    4   17     0    4    5    5    6    6    8    8   11   12   15   17   18   24   26   28   31   33   34   36 
LCS_GDT     M      45     M      45      4    4   17     0    4    5    5    6    6    8   10   11   12   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     E      46     E      46      4    4   17     3    4    5    5    6    6    8   10   11   12   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     P      47     P      47      4    4   17     3    4    5    5    6    6    8   10   11   12   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     L      48     L      48      3    4   17     3    3    4    4    6    6    8   10   11   12   15   17   18   19   21   28   30   31   33   35 
LCS_GDT     E      49     E      49      3    4   17     3    3    4    4    4    5    8   10   11   12   15   17   18   19   26   28   30   33   34   36 
LCS_GDT     L      55     L      55      6   11   17     3    5    8   10   11   11   11   11   12   13   13   15   16   18   20   24   26   26   27   27 
LCS_GDT     I      56     I      56      7   11   17     3    5    8   10   11   11   11   11   12   13   14   15   16   18   20   24   26   26   27   27 
LCS_GDT     P      57     P      57      9   11   17     3    6    9   10   11   11   11   11   12   13   15   17   18   19   21   25   29   32   34   35 
LCS_GDT     R      58     R      58      9   11   17     3    6    9   10   11   11   11   11   12   13   15   17   18   21   23   26   29   32   34   35 
LCS_GDT     M      59     M      59      9   11   17     4    6    9   10   11   11   11   11   12   13   14   15   18   22   23   26   29   32   34   35 
LCS_GDT     H      60     H      60      9   11   17     4    6    9   10   11   11   11   11   12   13   15   17   18   22   23   26   29   32   34   35 
LCS_GDT     D      61     D      61      9   11   17     4    6    9   10   11   11   11   11   12   13   15   17   18   22   23   26   29   32   34   35 
LCS_GDT     L      62     L      62      9   11   17     4    6    9   10   11   11   11   11   12   13   14   16   18   22   23   25   27   30   32   34 
LCS_GDT     L      63     L      63      9   11   17     4    6    9   10   11   11   11   11   12   13   15   17   18   22   22   24   26   28   30   34 
LCS_GDT     D      64     D      64      9   11   17     4    6    9   10   11   11   11   11   12   13   15   17   18   19   21   24   26   27   29   31 
LCS_GDT     N      65     N      65      9   11   17     4    6    9   10   11   11   11   11   12   13   14   15   17   18   19   20   23   25   26   28 
LCS_GDT     K      66     K      66      3    6   17     3    3    3    4    5    7    9   11   12   13   14   15   16   18   18   19   20   23   26   27 
LCS_GDT     Q      67     Q      67      3    6   17     3    3    4    5    7    9   10   11   12   13   14   15   16   18   18   19   20   23   26   27 
LCS_GDT     P      68     P      68      0    6   17     0    2    4    5    5    6    9   10   11   12   14   15   16   18   18   19   20   23   26   27 
LCS_GDT     A      76     A      76      3    6   15     0    3    3    5    7    8    8   11   12   13   14   15   18   22   26   28   31   33   34   36 
LCS_GDT     P      77     P      77      4    6   15     4    4    4    5    6    8    8   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     Y      78     Y      78      4    6   15     4    4    4    5    6    6    8    9   12   14   16   18   18   21   23   27   31   33   34   36 
LCS_GDT     Y      79     Y      79      4    6   15     4    4    5    5    6    6    8    8   10   12   13   15   15   17   21   25   28   32   34   35 
LCS_GDT     E      80     E      80      4    6   18     4    4    4    5    6    8    8   11   12   13   14   15   22   24   26   28   31   33   34   36 
LCS_GDT     M      81     M      81      3    6   19     3    3    4    5    7    8   11   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     A      82     A      82      3    4   19     3    4    5    6    8    9    9   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     L      83     L      83      3    4   19     3    4    5    6    8    9   11   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     A      84     A      84      3    4   19     3    4    5    6    8    9    9   11   12   14   16   18   20   23   25   27   31   33   34   36 
LCS_GDT     T      85     T      85      3    3   19     0    3    4    5    6    7    8   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     D      86     D      86      3    3   19     2    4    5    6    8    9    9   11   12   13   15   18   18   22   23   27   31   33   34   36 
LCS_GDT     H      87     H      87      3   11   19     0    3    5    6    7   10   11   11   12   14   15   16   18   22   23   26   29   32   34   35 
LCS_GDT     P      88     P      88      9   11   19     4    8    9   10   10   10   11   11   12   14   15   16   18   22   23   26   29   32   34   35 
LCS_GDT     Q      89     Q      89      9   11   19     4    8    9   10   10   10   11   11   12   14   15   17   18   22   23   26   29   32   34   36 
LCS_GDT     R      90     R      90      9   11   19     5    8    9   10   10   10   11   11   11   14   15   17   18   22   23   26   29   32   34   36 
LCS_GDT     A      91     A      91      9   11   19     4    8    9   10   10   10   11   11   12   14   15   17   18   22   25   27   31   33   34   36 
LCS_GDT     L      92     L      92      9   11   19     5    8    9   10   10   10   11   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     I      93     I      93      9   11   19     5    8    9   10   10   10   11   11   12   14   15   18   22   24   26   28   31   33   34   36 
LCS_GDT     L      94     L      94      9   11   19     5    8    9   10   10   10   11   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     A      95     A      95      9   11   19     5    8    9   10   10   10   11   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     E      96     E      96      9   11   19     4    7    9   10   10   10   11   11   12   14   15   16   18   20   26   28   31   33   34   36 
LCS_GDT     L      97     L      97      9   11   19     3    7    9   10   10   10   11   11   12   14   15   16   17   18   20   23   24   26   30   33 
LCS_GDT     E      98     E      98      7    9   19     3    5    7    8    8    9    9    9    9   11   12   14   17   19   20   23   24   28   30   36 
LCS_GDT     K      99     K      99      7    9   19     3    5    7    8    8    9    9   11   12   14   16   18   21   24   26   28   31   33   34   36 
LCS_GDT     L     100     L     100      7    9   15     3    5    7    8    8    9    9   11   11   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     D     101     D     101      7    9   15     3    5    7    8    8    9    9    9   11   13   14   17   22   24   26   28   31   33   34   36 
LCS_GDT     A     102     A     102      7    9   15     3    5    7    8    8    9    9   11   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     L     103     L     103      7    9   15     3    5    7    8    8    9    9    9   12   14   16   18   22   24   26   28   31   33   34   36 
LCS_GDT     F     104     F     104      7    9   15     3    5    7    8    8    9    9    9    9   11   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     A     105     A     105      6    9   15     3    5    7    8    8    9    9    9   10   12   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     D     106     D     106      3    9   15     3    3    5    7    7    9    9    9   10   12   15   17   22   24   26   28   31   33   34   36 
LCS_GDT     D     107     D     107      3    5   15     0    2    5    5    5    6    7    9   10   12   13   14   22   24   26   27   31   33   34   36 
LCS_GDT     A     108     A     108      3    5   11     1    2    5    5    5    6    7    9   10   12   15   17   22   24   26   28   31   33   34   36 
LCS_AVERAGE  LCS_A:   9.80  (   5.53    7.17   16.69 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     10     10     10     11     11     11     11     13     14     16     18     19     22     24     26     28     31     33     34     36 
GDT PERCENT_CA   9.17   9.17   9.17  10.09  10.09  10.09  10.09  11.93  12.84  14.68  16.51  17.43  20.18  22.02  23.85  25.69  28.44  30.28  31.19  33.03
GDT RMS_LOCAL    0.23   0.23   0.23   0.74   0.74   0.74   0.74   2.72   3.05   3.33   4.10   4.17   4.96   5.17   5.37   5.85   6.00   6.27   6.40   6.68
GDT RMS_ALL_CA  28.93  28.93  28.93  28.97  28.97  28.97  28.97  28.61  28.64  28.79  29.33  29.32  17.32  17.39  17.29  17.15  17.38  17.37  17.39  17.49

#      Molecule1      Molecule2       DISTANCE
LGA    Q      12      Q      12          2.535
LGA    A      13      A      13          1.309
LGA    L      14      L      14          2.982
LGA    E      15      E      15          3.183
LGA    A      16      A      16          1.462
LGA    L      17      L      17          2.025
LGA    L      18      L      18          3.598
LGA    R      19      R      19          2.731
LGA    E      20      E      20          0.455
LGA    H      21      H      21          2.899
LGA    Q      22      Q      22          3.693
LGA    R      25      R      25          3.717
LGA    N      26      N      26          3.820
LGA    P      29      P      29          8.619
LGA    Q      30      Q      30          9.291
LGA    P      31      P      31         13.360
LGA    H      32      H      32         12.368
LGA    Q      33      Q      33          7.529
LGA    F      34      F      34          8.268
LGA    N      35      N      35          7.897
LGA    S      36      S      36          6.081
LGA    T      37      T      37          9.774
LGA    Q      38      Q      38         13.748
LGA    M      42      M      42         19.612
LGA    D      43      D      43         21.639
LGA    T      44      T      44         18.997
LGA    M      45      M      45         16.743
LGA    E      46      E      46         19.938
LGA    P      47      P      47         20.396
LGA    L      48      L      48         14.454
LGA    E      49      E      49         14.541
LGA    L      55      L      55         11.177
LGA    I      56      I      56         11.515
LGA    P      57      P      57         11.768
LGA    R      58      R      58         13.882
LGA    M      59      M      59         17.398
LGA    H      60      H      60         19.986
LGA    D      61      D      61         20.070
LGA    L      62      L      62         22.807
LGA    L      63      L      63         25.923
LGA    D      64      D      64         27.416
LGA    N      65      N      65         29.809
LGA    K      66      K      66         32.707
LGA    Q      67      Q      67         37.795
LGA    P      68      P      68         38.368
LGA    A      76      A      76         34.216
LGA    P      77      P      77         39.071
LGA    Y      78      Y      78         40.963
LGA    Y      79      Y      79         41.633
LGA    E      80      E      80         44.447
LGA    M      81      M      81         49.848
LGA    A      82      A      82         47.524
LGA    L      83      L      83         46.604
LGA    A      84      A      84         50.237
LGA    T      85      T      85         53.641
LGA    D      86      D      86         50.189
LGA    H      87      H      87         40.461
LGA    P      88      P      88         41.077
LGA    Q      89      Q      89         38.940
LGA    R      90      R      90         37.268
LGA    A      91      A      91         36.040
LGA    L      92      L      92         34.365
LGA    I      93      I      93         33.530
LGA    L      94      L      94         33.125
LGA    A      95      A      95         31.644
LGA    E      96      E      96         31.123
LGA    L      97      L      97         32.305
LGA    E      98      E      98         28.573
LGA    K      99      K      99         25.126
LGA    L     100      L     100         27.780
LGA    D     101      D     101         32.754
LGA    A     102      A     102         31.564
LGA    L     103      L     103         30.927
LGA    F     104      F     104         35.451
LGA    A     105      A     105         38.964
LGA    D     106      D     106         40.647
LGA    D     107      D     107         41.557
LGA    A     108      A     108         45.625

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)   78  109    4.0     13    2.72    14.220    11.873     0.460

LGA_LOCAL      RMSD =  2.724  Number of atoms =   13  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 28.346  Number of atoms =   78 
Std_ALL_ATOMS  RMSD = 13.707  (standard rmsd on all 78 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.771529 * X  +  -0.074557 * Y  +   0.631810 * Z  +   7.439710
  Y_new =   0.082029 * X  +   0.996478 * Y  +   0.017421 * Z  + -15.282242
  Z_new =  -0.630883 * X  +   0.038386 * Y  +   0.774927 * Z  + -52.978508 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   0.049494   -3.092098  [ DEG:     2.8358   -177.1642 ]
  Theta =   0.682691    2.458901  [ DEG:    39.1153    140.8847 ]
  Phi   =   0.105922   -3.035671  [ DEG:     6.0689   -173.9311 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0352AL243_2                                  
REMARK     2: T0352.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0352AL243_2.T0352.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:   78  109   4.0   13   2.72  11.873    13.71
REMARK  ---------------------------------------------------------- 
MOLECULE T0352AL243_2
REMARK Aligment from pdb entry: 1br1B
ATOM      1  N   GLN    12      -9.366   3.647  -7.335  1.00  0.00              
ATOM      2  CA  GLN    12      -9.541   3.727  -8.778  1.00  0.00              
ATOM      3  C   GLN    12     -10.781   4.540  -9.141  1.00  0.00              
ATOM      4  O   GLN    12     -10.688   5.588  -9.782  1.00  0.00              
ATOM      5  N   ALA    13     -11.940   4.047  -8.714  1.00  0.00              
ATOM      6  CA  ALA    13     -13.230   4.677  -8.991  1.00  0.00              
ATOM      7  C   ALA    13     -13.315   6.184  -8.794  1.00  0.00              
ATOM      8  O   ALA    13     -14.103   6.847  -9.468  1.00  0.00              
ATOM      9  N   LEU    14     -12.527   6.725  -7.869  1.00  0.00              
ATOM     10  CA  LEU    14     -12.555   8.160  -7.608  1.00  0.00              
ATOM     11  C   LEU    14     -12.807   8.932  -8.900  1.00  0.00              
ATOM     12  O   LEU    14     -13.741   9.725  -8.984  1.00  0.00              
ATOM     13  N   GLU    15     -11.982   8.667  -9.909  1.00  0.00              
ATOM     14  CA  GLU    15     -12.118   9.343 -11.187  1.00  0.00              
ATOM     15  C   GLU    15     -13.523   9.385 -11.763  1.00  0.00              
ATOM     16  O   GLU    15     -14.077  10.463 -11.974  1.00  0.00              
ATOM     17  N   ALA    16     -14.100   8.214 -12.020  1.00  0.00              
ATOM     18  CA  ALA    16     -15.441   8.128 -12.591  1.00  0.00              
ATOM     19  C   ALA    16     -16.508   8.782 -11.719  1.00  0.00              
ATOM     20  O   ALA    16     -17.443   9.397 -12.231  1.00  0.00              
ATOM     21  N   LEU    17     -16.372   8.645 -10.403  1.00  0.00              
ATOM     22  CA  LEU    17     -17.333   9.231  -9.477  1.00  0.00              
ATOM     23  C   LEU    17     -17.280  10.753  -9.557  1.00  0.00              
ATOM     24  O   LEU    17     -18.301  11.428  -9.425  1.00  0.00              
ATOM     25  N   LEU    18     -16.083  11.289  -9.767  1.00  0.00              
ATOM     26  CA  LEU    18     -15.916  12.731  -9.890  1.00  0.00              
ATOM     27  C   LEU    18     -16.575  13.122 -11.203  1.00  0.00              
ATOM     28  O   LEU    18     -17.313  14.103 -11.278  1.00  0.00              
ATOM     29  N   ARG    19     -16.306  12.327 -12.234  1.00  0.00              
ATOM     30  CA  ARG    19     -16.866  12.555 -13.558  1.00  0.00              
ATOM     31  C   ARG    19     -18.385  12.511 -13.499  1.00  0.00              
ATOM     32  O   ARG    19     -19.057  13.457 -13.905  1.00  0.00              
ATOM     33  N   GLU    20     -18.917  11.403 -12.991  1.00  0.00              
ATOM     34  CA  GLU    20     -20.358  11.221 -12.870  1.00  0.00              
ATOM     35  C   GLU    20     -20.996  12.442 -12.219  1.00  0.00              
ATOM     36  O   GLU    20     -22.131  12.800 -12.528  1.00  0.00              
ATOM     37  N   HIS    21     -20.256  13.075 -11.313  1.00  0.00              
ATOM     38  CA  HIS    21     -20.741  14.266 -10.626  1.00  0.00              
ATOM     39  C   HIS    21     -20.527  15.479 -11.521  1.00  0.00              
ATOM     40  O   HIS    21     -20.522  16.619 -11.055  1.00  0.00              
ATOM     41  N   GLN    22     -20.345  15.218 -12.811  1.00  0.00              
ATOM     42  CA  GLN    22     -20.134  16.287 -13.767  1.00  0.00              
ATOM     43  C   GLN    22     -18.739  16.880 -13.735  1.00  0.00              
ATOM     44  O   GLN    22     -18.559  18.055 -14.049  1.00  0.00              
ATOM     45  N   ARG    25     -17.746  16.081 -13.359  1.00  0.00              
ATOM     46  CA  ARG    25     -16.379  16.578 -13.311  1.00  0.00              
ATOM     47  C   ARG    25     -15.526  16.011 -14.436  1.00  0.00              
ATOM     48  O   ARG    25     -15.670  14.849 -14.813  1.00  0.00              
ATOM     49  N   ASN    26     -14.635  16.840 -14.961  1.00  0.00              
ATOM     50  CA  ASN    26     -13.754  16.425 -16.041  1.00  0.00              
ATOM     51  C   ASN    26     -12.288  16.517 -15.618  1.00  0.00              
ATOM     52  O   ASN    26     -11.456  17.060 -16.349  1.00  0.00              
ATOM     53  N   PRO    29     -11.954  15.982 -14.440  1.00  0.00              
ATOM     54  CA  PRO    29     -10.555  16.049 -13.999  1.00  0.00              
ATOM     55  C   PRO    29      -9.661  15.218 -14.908  1.00  0.00              
ATOM     56  O   PRO    29     -10.000  14.085 -15.251  1.00  0.00              
ATOM     57  N   GLN    30      -8.527  15.781 -15.311  1.00  0.00              
ATOM     58  CA  GLN    30      -7.597  15.051 -16.162  1.00  0.00              
ATOM     59  C   GLN    30      -7.064  13.901 -15.322  1.00  0.00              
ATOM     60  O   GLN    30      -7.309  13.849 -14.119  1.00  0.00              
ATOM     61  N   PRO    31      -6.335  12.983 -15.943  1.00  0.00              
ATOM     62  CA  PRO    31      -5.798  11.834 -15.221  1.00  0.00              
ATOM     63  C   PRO    31      -4.823  12.209 -14.106  1.00  0.00              
ATOM     64  O   PRO    31      -4.718  11.501 -13.104  1.00  0.00              
ATOM     65  N   HIS    32      -4.115  13.320 -14.282  1.00  0.00              
ATOM     66  CA  HIS    32      -3.151  13.775 -13.286  1.00  0.00              
ATOM     67  C   HIS    32      -3.847  14.447 -12.108  1.00  0.00              
ATOM     68  O   HIS    32      -3.526  14.180 -10.948  1.00  0.00              
ATOM     69  N   GLN    33      -4.798  15.322 -12.417  1.00  0.00              
ATOM     70  CA  GLN    33      -5.548  16.042 -11.394  1.00  0.00              
ATOM     71  C   GLN    33      -6.181  15.082 -10.393  1.00  0.00              
ATOM     72  O   GLN    33      -6.523  15.477  -9.280  1.00  0.00              
ATOM     73  N   PHE    34      -6.332  13.824 -10.794  1.00  0.00              
ATOM     74  CA  PHE    34      -6.932  12.809  -9.937  1.00  0.00              
ATOM     75  C   PHE    34      -5.900  12.115  -9.055  1.00  0.00              
ATOM     76  O   PHE    34      -6.156  11.846  -7.881  1.00  0.00              
ATOM     77  N   ASN    35      -4.736  11.820  -9.626  1.00  0.00              
ATOM     78  CA  ASN    35      -3.671  11.159  -8.882  1.00  0.00              
ATOM     79  C   ASN    35      -3.075  12.116  -7.859  1.00  0.00              
ATOM     80  O   ASN    35      -2.781  11.728  -6.728  1.00  0.00              
ATOM     81  N   SER    36      -2.900  13.369  -8.267  1.00  0.00              
ATOM     82  CA  SER    36      -2.346  14.398  -7.397  1.00  0.00              
ATOM     83  C   SER    36      -3.089  14.428  -6.064  1.00  0.00              
ATOM     84  O   SER    36      -2.478  14.593  -5.007  1.00  0.00              
ATOM     85  N   THR    37      -2.384  11.135  -3.707  1.00  0.00              
ATOM     86  CA  THR    37      -1.059  10.884  -3.178  1.00  0.00              
ATOM     87  C   THR    37      -0.232  10.042  -4.126  1.00  0.00              
ATOM     88  O   THR    37       0.713   9.374  -3.710  1.00  0.00              
ATOM     89  N   GLN    38      -0.593  10.071  -5.406  1.00  0.00              
ATOM     90  CA  GLN    38       0.117   9.311  -6.427  1.00  0.00              
ATOM     91  C   GLN    38       0.410   7.883  -5.972  1.00  0.00              
ATOM     92  O   GLN    38       1.563   7.522  -5.732  1.00  0.00              
ATOM     93  N   MET    42      -0.637   7.054  -5.837  1.00  0.00              
ATOM     94  CA  MET    42      -0.456   5.663  -5.408  1.00  0.00              
ATOM     95  C   MET    42       0.189   4.835  -6.517  1.00  0.00              
ATOM     96  O   MET    42       0.843   5.379  -7.404  1.00  0.00              
ATOM     97  N   ASP    43       0.006   3.520  -6.462  1.00  0.00              
ATOM     98  CA  ASP    43       0.569   2.637  -7.475  1.00  0.00              
ATOM     99  C   ASP    43      -0.436   1.568  -7.878  1.00  0.00              
ATOM    100  O   ASP    43      -1.034   0.914  -7.025  1.00  0.00              
ATOM    101  N   THR    44      -9.211   2.083  -0.427  1.00  0.00              
ATOM    102  CA  THR    44     -10.619   2.457  -0.518  1.00  0.00              
ATOM    103  C   THR    44     -10.904   3.893  -0.087  1.00  0.00              
ATOM    104  O   THR    44     -10.017   4.594   0.404  1.00  0.00              
ATOM    105  N   MET    45     -12.152   4.318  -0.263  1.00  0.00              
ATOM    106  CA  MET    45     -12.555   5.673   0.089  1.00  0.00              
ATOM    107  C   MET    45     -13.941   5.766   0.720  1.00  0.00              
ATOM    108  O   MET    45     -14.835   4.979   0.414  1.00  0.00              
ATOM    109  N   GLU    46     -14.104   6.745   1.603  1.00  0.00              
ATOM    110  CA  GLU    46     -15.371   6.993   2.281  1.00  0.00              
ATOM    111  C   GLU    46     -15.759   8.427   1.933  1.00  0.00              
ATOM    112  O   GLU    46     -14.908   9.313   1.922  1.00  0.00              
ATOM    113  N   PRO    47     -17.036   8.658   1.641  1.00  0.00              
ATOM    114  CA  PRO    47     -17.490   9.993   1.262  1.00  0.00              
ATOM    115  C   PRO    47     -16.816  11.136   2.014  1.00  0.00              
ATOM    116  O   PRO    47     -16.307  12.069   1.395  1.00  0.00              
ATOM    117  N   LEU    48     -16.818  11.072   3.342  1.00  0.00              
ATOM    118  CA  LEU    48     -16.216  12.133   4.139  1.00  0.00              
ATOM    119  C   LEU    48     -14.784  12.458   3.731  1.00  0.00              
ATOM    120  O   LEU    48     -14.375  13.616   3.772  1.00  0.00              
ATOM    121  N   GLU    49     -14.019  11.441   3.346  1.00  0.00              
ATOM    122  CA  GLU    49     -12.641  11.666   2.923  1.00  0.00              
ATOM    123  C   GLU    49     -12.604  11.943   1.425  1.00  0.00              
ATOM    124  O   GLU    49     -11.619  12.469   0.904  1.00  0.00              
ATOM    125  N   LEU    55     -13.685  11.588   0.737  1.00  0.00              
ATOM    126  CA  LEU    55     -13.783  11.801  -0.702  1.00  0.00              
ATOM    127  C   LEU    55     -14.227  13.227  -1.002  1.00  0.00              
ATOM    128  O   LEU    55     -13.639  13.904  -1.844  1.00  0.00              
ATOM    129  N   ILE    56     -15.271  13.674  -0.311  1.00  0.00              
ATOM    130  CA  ILE    56     -15.800  15.019  -0.506  1.00  0.00              
ATOM    131  C   ILE    56     -14.702  16.077  -0.558  1.00  0.00              
ATOM    132  O   ILE    56     -14.686  16.912  -1.461  1.00  0.00              
ATOM    133  N   PRO    57     -13.767  16.056   0.410  1.00  0.00              
ATOM    134  CA  PRO    57     -12.679  17.038   0.433  1.00  0.00              
ATOM    135  C   PRO    57     -11.907  17.114  -0.879  1.00  0.00              
ATOM    136  O   PRO    57     -11.260  18.119  -1.173  1.00  0.00              
ATOM    137  N   ARG    58     -11.978  16.045  -1.664  1.00  0.00              
ATOM    138  CA  ARG    58     -11.291  15.994  -2.948  1.00  0.00              
ATOM    139  C   ARG    58     -12.203  16.512  -4.050  1.00  0.00              
ATOM    140  O   ARG    58     -11.778  17.286  -4.909  1.00  0.00              
ATOM    141  N   MET    59     -13.458  16.076  -4.019  1.00  0.00              
ATOM    142  CA  MET    59     -14.444  16.496  -5.007  1.00  0.00              
ATOM    143  C   MET    59     -14.318  17.994  -5.250  1.00  0.00              
ATOM    144  O   MET    59     -14.274  18.448  -6.393  1.00  0.00              
ATOM    145  N   HIS    60     -14.251  18.754  -4.162  1.00  0.00              
ATOM    146  CA  HIS    60     -14.128  20.203  -4.240  1.00  0.00              
ATOM    147  C   HIS    60     -12.756  20.620  -4.750  1.00  0.00              
ATOM    148  O   HIS    60     -12.655  21.273  -5.788  1.00  0.00              
ATOM    149  N   ASP    61     -11.706  20.248  -4.019  1.00  0.00              
ATOM    150  CA  ASP    61     -10.340  20.595  -4.406  1.00  0.00              
ATOM    151  C   ASP    61     -10.223  20.578  -5.922  1.00  0.00              
ATOM    152  O   ASP    61      -9.618  21.469  -6.518  1.00  0.00              
ATOM    153  N   LEU    62     -10.808  19.559  -6.543  1.00  0.00              
ATOM    154  CA  LEU    62     -10.796  19.464  -7.993  1.00  0.00              
ATOM    155  C   LEU    62     -11.742  20.552  -8.483  1.00  0.00              
ATOM    156  O   LEU    62     -11.311  21.525  -9.090  1.00  0.00              
ATOM    157  N   LEU    63     -13.027  20.383  -8.186  1.00  0.00              
ATOM    158  CA  LEU    63     -14.074  21.329  -8.571  1.00  0.00              
ATOM    159  C   LEU    63     -13.562  22.737  -8.874  1.00  0.00              
ATOM    160  O   LEU    63     -13.956  23.344  -9.870  1.00  0.00              
ATOM    161  N   ASP    64     -12.690  23.256  -8.014  1.00  0.00              
ATOM    162  CA  ASP    64     -12.126  24.591  -8.205  1.00  0.00              
ATOM    163  C   ASP    64     -10.763  24.493  -8.892  1.00  0.00              
ATOM    164  O   ASP    64      -9.772  24.130  -8.256  1.00  0.00              
ATOM    165  N   ASN    65     -10.711  24.824 -10.182  1.00  0.00              
ATOM    166  CA  ASN    65      -9.454  24.742 -10.918  1.00  0.00              
ATOM    167  C   ASN    65      -9.081  26.001 -11.698  1.00  0.00              
ATOM    168  O   ASN    65      -9.858  26.958 -11.777  1.00  0.00              
ATOM    169  N   LYS    66      -7.882  25.977 -12.281  1.00  0.00              
ATOM    170  CA  LYS    66      -7.349  27.106 -13.038  1.00  0.00              
ATOM    171  C   LYS    66      -7.851  27.232 -14.472  1.00  0.00              
ATOM    172  O   LYS    66      -8.106  28.344 -14.939  1.00  0.00              
ATOM    173  N   GLN    67      -7.989  26.106 -15.171  1.00  0.00              
ATOM    174  CA  GLN    67      -8.429  26.151 -16.565  1.00  0.00              
ATOM    175  C   GLN    67      -9.549  25.204 -16.981  1.00  0.00              
ATOM    176  O   GLN    67     -10.372  24.773 -16.172  1.00  0.00              
ATOM    177  N   PRO    68      -9.552  24.916 -18.280  1.00  0.00              
ATOM    178  CA  PRO    68     -10.511  24.037 -18.938  1.00  0.00              
ATOM    179  C   PRO    68     -10.399  24.239 -20.458  1.00  0.00              
ATOM    180  O   PRO    68      -9.991  25.306 -20.924  1.00  0.00              
ATOM    181  N   ALA    76     -10.748  23.208 -21.226  1.00  0.00              
ATOM    182  CA  ALA    76     -10.693  23.320 -22.672  1.00  0.00              
ATOM    183  C   ALA    76     -11.913  24.073 -23.160  1.00  0.00              
ATOM    184  O   ALA    76     -12.715  24.540 -22.347  1.00  0.00              
ATOM    185  N   PRO    77     -12.067  24.180 -24.478  1.00  0.00              
ATOM    186  CA  PRO    77     -13.198  24.898 -25.069  1.00  0.00              
ATOM    187  C   PRO    77     -13.133  24.846 -26.589  1.00  0.00              
ATOM    188  O   PRO    77     -12.052  24.964 -27.169  1.00  0.00              
ATOM    189  N   TYR    78     -14.292  24.679 -27.221  1.00  0.00              
ATOM    190  CA  TYR    78     -14.409  24.614 -28.675  1.00  0.00              
ATOM    191  C   TYR    78     -13.226  25.386 -29.249  1.00  0.00              
ATOM    192  O   TYR    78     -12.260  24.852 -29.786  1.00  0.00              
ATOM    193  N   TYR    79     -13.277  26.663 -28.976  1.00  0.00              
ATOM    194  CA  TYR    79     -12.282  27.607 -29.416  1.00  0.00              
ATOM    195  C   TYR    79     -10.912  27.000 -29.735  1.00  0.00              
ATOM    196  O   TYR    79     -10.412  27.147 -30.855  1.00  0.00              
ATOM    197  N   GLU    80     -10.323  26.312 -28.759  1.00  0.00              
ATOM    198  CA  GLU    80      -9.017  25.697 -28.939  1.00  0.00              
ATOM    199  C   GLU    80      -9.174  24.211 -29.203  1.00  0.00              
ATOM    200  O   GLU    80      -8.511  23.651 -30.075  1.00  0.00              
ATOM    201  N   MET    81      -9.619  23.523 -32.630  1.00  0.00              
ATOM    202  CA  MET    81      -8.464  24.097 -33.307  1.00  0.00              
ATOM    203  C   MET    81      -7.344  23.069 -33.449  1.00  0.00              
ATOM    204  O   MET    81      -6.524  23.144 -34.360  1.00  0.00              
ATOM    205  N   ALA    82      -7.314  22.119 -32.529  1.00  0.00              
ATOM    206  CA  ALA    82      -6.296  21.095 -32.559  1.00  0.00              
ATOM    207  C   ALA    82      -6.651  19.955 -33.492  1.00  0.00              
ATOM    208  O   ALA    82      -5.792  19.446 -34.214  1.00  0.00              
ATOM    209  N   LEU    83      -7.915  19.548 -33.488  1.00  0.00              
ATOM    210  CA  LEU    83      -8.338  18.453 -34.346  1.00  0.00              
ATOM    211  C   LEU    83      -8.309  18.875 -35.814  1.00  0.00              
ATOM    212  O   LEU    83      -7.924  18.093 -36.693  1.00  0.00              
ATOM    213  N   ALA    84      -8.682  20.126 -36.067  1.00  0.00              
ATOM    214  CA  ALA    84      -8.700  20.686 -37.420  1.00  0.00              
ATOM    215  C   ALA    84      -7.353  20.577 -38.122  1.00  0.00              
ATOM    216  O   ALA    84      -7.221  20.872 -39.302  1.00  0.00              
ATOM    217  N   THR    85      -6.356  20.138 -37.373  1.00  0.00              
ATOM    218  CA  THR    85      -4.993  19.949 -37.864  1.00  0.00              
ATOM    219  C   THR    85      -4.844  18.567 -38.510  1.00  0.00              
ATOM    220  O   THR    85      -3.795  18.229 -39.071  1.00  0.00              
ATOM    221  N   ASP    86      -7.380  17.498 -40.448  1.00  0.00              
ATOM    222  CA  ASP    86      -8.353  17.615 -41.533  1.00  0.00              
ATOM    223  C   ASP    86      -7.660  17.561 -42.897  1.00  0.00              
ATOM    224  O   ASP    86      -7.477  18.595 -43.539  1.00  0.00              
ATOM    225  N   HIS    87     -12.488   8.914 -39.333  1.00  0.00              
ATOM    226  CA  HIS    87     -12.677   8.259 -38.052  1.00  0.00              
ATOM    227  C   HIS    87     -11.589   7.265 -37.693  1.00  0.00              
ATOM    228  O   HIS    87     -11.671   6.558 -36.682  1.00  0.00              
ATOM    229  N   PRO    88     -10.559   7.203 -38.521  1.00  0.00              
ATOM    230  CA  PRO    88      -9.475   6.280 -38.266  1.00  0.00              
ATOM    231  C   PRO    88      -8.289   7.086 -37.790  1.00  0.00              
ATOM    232  O   PRO    88      -7.520   6.645 -36.939  1.00  0.00              
ATOM    233  N   GLN    89      -8.143   8.274 -38.361  1.00  0.00              
ATOM    234  CA  GLN    89      -7.062   9.151 -37.968  1.00  0.00              
ATOM    235  C   GLN    89      -7.442   9.708 -36.604  1.00  0.00              
ATOM    236  O   GLN    89      -6.604   9.794 -35.709  1.00  0.00              
ATOM    237  N   ARG    90      -8.710  10.075 -36.433  1.00  0.00              
ATOM    238  CA  ARG    90      -9.138  10.597 -35.148  1.00  0.00              
ATOM    239  C   ARG    90      -8.947   9.474 -34.161  1.00  0.00              
ATOM    240  O   ARG    90      -8.442   9.689 -33.070  1.00  0.00              
ATOM    241  N   ALA    91      -9.333   8.265 -34.556  1.00  0.00              
ATOM    242  CA  ALA    91      -9.210   7.109 -33.673  1.00  0.00              
ATOM    243  C   ALA    91      -7.757   6.840 -33.285  1.00  0.00              
ATOM    244  O   ALA    91      -7.473   6.254 -32.243  1.00  0.00              
ATOM    245  N   LEU    92      -6.830   7.277 -34.122  1.00  0.00              
ATOM    246  CA  LEU    92      -5.418   7.074 -33.847  1.00  0.00              
ATOM    247  C   LEU    92      -4.974   8.042 -32.769  1.00  0.00              
ATOM    248  O   LEU    92      -4.804   7.679 -31.612  1.00  0.00              
ATOM    249  N   ILE    93      -4.791   9.285 -33.186  1.00  0.00              
ATOM    250  CA  ILE    93      -4.367  10.362 -32.311  1.00  0.00              
ATOM    251  C   ILE    93      -4.851  10.160 -30.894  1.00  0.00              
ATOM    252  O   ILE    93      -4.071  10.165 -29.946  1.00  0.00              
ATOM    253  N   LEU    94      -6.152   9.981 -30.756  1.00  0.00              
ATOM    254  CA  LEU    94      -6.751   9.816 -29.446  1.00  0.00              
ATOM    255  C   LEU    94      -6.152   8.666 -28.663  1.00  0.00              
ATOM    256  O   LEU    94      -6.237   8.633 -27.436  1.00  0.00              
ATOM    257  N   ALA    95      -5.538   7.719 -29.356  1.00  0.00              
ATOM    258  CA  ALA    95      -4.956   6.609 -28.643  1.00  0.00              
ATOM    259  C   ALA    95      -3.477   6.476 -28.912  1.00  0.00              
ATOM    260  O   ALA    95      -2.982   5.361 -29.040  1.00  0.00              
ATOM    261  N   GLU    96      -2.774   7.605 -28.994  1.00  0.00              
ATOM    262  CA  GLU    96      -1.328   7.600 -29.258  1.00  0.00              
ATOM    263  C   GLU    96      -0.664   8.878 -28.813  1.00  0.00              
ATOM    264  O   GLU    96       0.520   9.062 -29.041  1.00  0.00              
ATOM    265  N   LEU    97      -1.438   9.774 -28.215  1.00  0.00              
ATOM    266  CA  LEU    97      -0.911  11.051 -27.751  1.00  0.00              
ATOM    267  C   LEU    97      -1.435  11.346 -26.357  1.00  0.00              
ATOM    268  O   LEU    97      -2.535  10.919 -26.000  1.00  0.00              
ATOM    269  N   GLU    98     -11.185   0.556 -27.311  1.00  0.00              
ATOM    270  CA  GLU    98     -12.617   0.499 -27.052  1.00  0.00              
ATOM    271  C   GLU    98     -13.129   1.885 -26.714  1.00  0.00              
ATOM    272  O   GLU    98     -14.144   2.333 -27.254  1.00  0.00              
ATOM    273  N   LYS    99     -12.422   2.569 -25.822  1.00  0.00              
ATOM    274  CA  LYS    99     -12.818   3.906 -25.425  1.00  0.00              
ATOM    275  C   LYS    99     -13.190   4.731 -26.663  1.00  0.00              
ATOM    276  O   LYS    99     -14.334   5.162 -26.795  1.00  0.00              
ATOM    277  N   LEU   100     -12.232   4.930 -27.574  1.00  0.00              
ATOM    278  CA  LEU   100     -12.470   5.715 -28.782  1.00  0.00              
ATOM    279  C   LEU   100     -13.587   5.127 -29.593  1.00  0.00              
ATOM    280  O   LEU   100     -14.417   5.860 -30.126  1.00  0.00              
ATOM    281  N   ASP   101     -13.618   3.802 -29.702  1.00  0.00              
ATOM    282  CA  ASP   101     -14.690   3.162 -30.457  1.00  0.00              
ATOM    283  C   ASP   101     -16.043   3.698 -29.982  1.00  0.00              
ATOM    284  O   ASP   101     -16.773   4.322 -30.750  1.00  0.00              
ATOM    285  N   ALA   102     -16.339   3.477 -28.699  1.00  0.00              
ATOM    286  CA  ALA   102     -17.582   3.929 -28.067  1.00  0.00              
ATOM    287  C   ALA   102     -17.860   5.416 -28.267  1.00  0.00              
ATOM    288  O   ALA   102     -19.006   5.841 -28.266  1.00  0.00              
ATOM    289  N   LEU   103     -16.808   6.207 -28.429  1.00  0.00              
ATOM    290  CA  LEU   103     -16.959   7.648 -28.594  1.00  0.00              
ATOM    291  C   LEU   103     -17.399   8.081 -29.980  1.00  0.00              
ATOM    292  O   LEU   103     -18.525   8.530 -30.154  1.00  0.00              
ATOM    293  N   PHE   104     -16.502   7.957 -30.953  1.00  0.00              
ATOM    294  CA  PHE   104     -16.770   8.353 -32.337  1.00  0.00              
ATOM    295  C   PHE   104     -17.875   7.536 -32.958  1.00  0.00              
ATOM    296  O   PHE   104     -18.671   8.048 -33.745  1.00  0.00              
ATOM    297  N   ALA   105     -17.892   6.255 -32.608  1.00  0.00              
ATOM    298  CA  ALA   105     -18.886   5.320 -33.119  1.00  0.00              
ATOM    299  C   ALA   105     -20.241   5.975 -33.371  1.00  0.00              
ATOM    300  O   ALA   105     -20.908   6.439 -32.437  1.00  0.00              
ATOM    301  N   ASP   106     -20.635   6.015 -34.640  1.00  0.00              
ATOM    302  CA  ASP   106     -21.915   6.592 -34.998  1.00  0.00              
ATOM    303  C   ASP   106     -21.838   8.023 -35.473  1.00  0.00              
ATOM    304  O   ASP   106     -22.868   8.685 -35.601  1.00  0.00              
ATOM    305  N   ASP   107     -19.278   8.656 -37.884  1.00  0.00              
ATOM    306  CA  ASP   107     -18.548   8.464 -39.125  1.00  0.00              
ATOM    307  C   ASP   107     -19.633   8.340 -40.173  1.00  0.00              
ATOM    308  O   ASP   107     -20.651   7.699 -39.918  1.00  0.00              
ATOM    309  N   ALA   108     -19.452   8.955 -41.334  1.00  0.00              
ATOM    310  CA  ALA   108     -20.474   8.870 -42.374  1.00  0.00              
ATOM    311  C   ALA   108     -20.247   7.659 -43.272  1.00  0.00              
ATOM    312  O   ALA   108     -19.612   6.686 -42.874  1.00  0.00              
END
