
PFRMAT TS
TARGET T0300
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0300 model 2 Wed May 24 13:29:33 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  2
PARENT N/A
ATOM      2  N   ASP     7      -4.332  -1.582  28.950  1.00  0.00
ATOM      3  CA  ASP     7      -3.483  -0.996  27.911  1.00  0.00
ATOM      4  CB  ASP     7      -3.739   0.508  27.797  1.00  0.00
ATOM      5  CG  ASP     7      -5.072   0.824  27.147  1.00  0.00
ATOM      6  OD1 ASP     7      -5.712  -0.108  26.618  1.00  0.00
ATOM      7  OD2 ASP     7      -5.475   2.007  27.166  1.00  0.00
ATOM      8  O   ASP     7      -1.532  -1.133  29.298  1.00  0.00
ATOM      9  C   ASP     7      -1.991  -1.163  28.157  1.00  0.00
ATOM     10  N   LYS     8      -1.242  -1.322  27.067  1.00  0.00
ATOM     11  CA  LYS     8       0.207  -1.486  27.110  1.00  0.00
ATOM     12  CB  LYS     8       0.783  -1.544  25.694  1.00  0.00
ATOM     13  CG  LYS     8       0.362  -2.771  24.903  1.00  0.00
ATOM     14  CD  LYS     8       0.988  -2.777  23.518  1.00  0.00
ATOM     15  CE  LYS     8       0.550  -3.993  22.718  1.00  0.00
ATOM     16  NZ  LYS     8       1.169  -4.020  21.364  1.00  0.00
ATOM     17  O   LYS     8       0.346   0.776  27.843  1.00  0.00
ATOM     18  C   LYS     8       0.865  -0.331  27.840  1.00  0.00
ATOM     19  N   THR     9       2.006  -0.585  28.463  1.00  0.00
ATOM     20  CA  THR     9       2.726   0.470  29.154  1.00  0.00
ATOM     21  CB  THR     9       3.795  -0.104  30.102  1.00  0.00
ATOM     22  CG2 THR     9       3.162  -1.056  31.106  1.00  0.00
ATOM     23  OG1 THR     9       4.779  -0.817  29.343  1.00  0.00
ATOM     24  O   THR     9       3.304   1.006  26.879  1.00  0.00
ATOM     25  C   THR     9       3.386   1.318  28.069  1.00  0.00
ATOM     26  N   TYR    10       4.057   2.382  28.479  1.00  0.00
ATOM     27  CA  TYR    10       4.743   3.243  27.535  1.00  0.00
ATOM     28  CB  TYR    10       5.317   4.469  28.247  1.00  0.00
ATOM     29  CG  TYR    10       6.053   5.423  27.330  1.00  0.00
ATOM     30  CD1 TYR    10       5.354   6.292  26.502  1.00  0.00
ATOM     31  CD2 TYR    10       7.441   5.448  27.297  1.00  0.00
ATOM     32  CE1 TYR    10       6.017   7.165  25.662  1.00  0.00
ATOM     33  CE2 TYR    10       8.120   6.315  26.463  1.00  0.00
ATOM     34  CZ  TYR    10       7.396   7.178  25.641  1.00  0.00
ATOM     35  OH  TYR    10       8.057   8.047  24.805  1.00  0.00
ATOM     36  O   TYR    10       6.187   2.639  25.704  1.00  0.00
ATOM     37  C   TYR    10       5.888   2.454  26.884  1.00  0.00
ATOM     38  N   GLU    11       6.521   1.576  27.657  1.00  0.00
ATOM     39  CA  GLU    11       7.631   0.782  27.145  1.00  0.00
ATOM     40  CB  GLU    11       8.397   0.128  28.297  1.00  0.00
ATOM     41  CG  GLU    11       9.191   1.106  29.148  1.00  0.00
ATOM     42  CD  GLU    11       9.862   0.436  30.331  1.00  0.00
ATOM     43  OE1 GLU    11       9.656  -0.781  30.521  1.00  0.00
ATOM     44  OE2 GLU    11      10.594   1.129  31.069  1.00  0.00
ATOM     45  O   GLU    11       7.910  -0.695  25.282  1.00  0.00
ATOM     46  C   GLU    11       7.196  -0.342  26.210  1.00  0.00
ATOM     47  N   GLU    12       6.030  -0.909  26.458  1.00  0.00
ATOM     48  CA  GLU    12       5.540  -1.967  25.600  1.00  0.00
ATOM     49  CB  GLU    12       4.292  -2.613  26.204  1.00  0.00
ATOM     50  CG  GLU    12       4.563  -3.437  27.453  1.00  0.00
ATOM     51  CD  GLU    12       3.292  -3.959  28.094  1.00  0.00
ATOM     52  OE1 GLU    12       2.196  -3.616  27.604  1.00  0.00
ATOM     53  OE2 GLU    12       3.393  -4.710  29.087  1.00  0.00
ATOM     54  O   GLU    12       5.441  -1.980  23.202  1.00  0.00
ATOM     55  C   GLU    12       5.191  -1.375  24.241  1.00  0.00
ATOM     56  N   MET    13       4.652  -0.165  24.246  1.00  0.00
ATOM     57  CA  MET    13       4.305   0.494  22.995  1.00  0.00
ATOM     58  CB  MET    13       3.569   1.808  23.267  1.00  0.00
ATOM     59  CG  MET    13       2.175   1.630  23.846  1.00  0.00
ATOM     60  SD  MET    13       1.079   0.713  22.747  1.00  0.00
ATOM     61  CE  MET    13       0.880   1.886  21.409  1.00  0.00
ATOM     62  O   MET    13       5.644   0.582  21.009  1.00  0.00
ATOM     63  C   MET    13       5.572   0.784  22.224  1.00  0.00
ATOM     64  N   VAL    14       6.576   1.269  22.939  1.00  0.00
ATOM     65  CA  VAL    14       7.821   1.596  22.290  1.00  0.00
ATOM     66  CB  VAL    14       8.883   2.053  23.307  1.00  0.00
ATOM     67  CG1 VAL    14      10.238   2.202  22.631  1.00  0.00
ATOM     68  CG2 VAL    14       8.499   3.396  23.910  1.00  0.00
ATOM     69  O   VAL    14       8.859   0.474  20.463  1.00  0.00
ATOM     70  C   VAL    14       8.338   0.369  21.567  1.00  0.00
ATOM     71  N   LYS    15       8.200  -0.794  22.183  1.00  0.00
ATOM     72  CA  LYS    15       8.655  -2.009  21.533  1.00  0.00
ATOM     73  CB  LYS    15       8.548  -3.200  22.487  1.00  0.00
ATOM     74  CG  LYS    15       9.549  -3.171  23.631  1.00  0.00
ATOM     75  CD  LYS    15       9.390  -4.382  24.534  1.00  0.00
ATOM     76  CE  LYS    15      10.367  -4.336  25.697  1.00  0.00
ATOM     77  NZ  LYS    15      10.207  -5.506  26.604  1.00  0.00
ATOM     78  O   LYS    15       8.351  -2.818  19.287  1.00  0.00
ATOM     79  C   LYS    15       7.823  -2.329  20.287  1.00  0.00
ATOM     80  N   GLU    16       6.523  -2.067  20.351  1.00  0.00
ATOM     81  CA  GLU    16       5.664  -2.334  19.207  1.00  0.00
ATOM     82  CB  GLU    16       4.204  -2.034  19.551  1.00  0.00
ATOM     83  CG  GLU    16       3.228  -2.331  18.425  1.00  0.00
ATOM     84  CD  GLU    16       1.789  -2.053  18.813  1.00  0.00
ATOM     85  OE1 GLU    16       1.554  -1.642  19.969  1.00  0.00
ATOM     86  OE2 GLU    16       0.896  -2.247  17.961  1.00  0.00
ATOM     87  O   GLU    16       6.228  -1.912  16.913  1.00  0.00
ATOM     88  C   GLU    16       6.099  -1.450  18.050  1.00  0.00
ATOM     89  N   VAL    17       6.339  -0.178  18.351  1.00  0.00
ATOM     90  CA  VAL    17       6.737   0.780  17.334  1.00  0.00
ATOM     91  CB  VAL    17       6.952   2.183  17.933  1.00  0.00
ATOM     92  CG1 VAL    17       7.558   3.118  16.897  1.00  0.00
ATOM     93  CG2 VAL    17       5.629   2.772  18.398  1.00  0.00
ATOM     94  O   VAL    17       8.162   0.413  15.452  1.00  0.00
ATOM     95  C   VAL    17       8.035   0.354  16.675  1.00  0.00
ATOM     96  N   GLU    18       8.994  -0.094  17.474  1.00  0.00
ATOM     97  CA  GLU    18      10.267  -0.542  16.928  1.00  0.00
ATOM     98  CB  GLU    18      11.191  -1.022  18.048  1.00  0.00
ATOM     99  CG  GLU    18      11.719   0.091  18.939  1.00  0.00
ATOM    100  CD  GLU    18      12.529  -0.433  20.108  1.00  0.00
ATOM    101  OE1 GLU    18      12.616  -1.670  20.264  1.00  0.00
ATOM    102  OE2 GLU    18      13.077   0.392  20.868  1.00  0.00
ATOM    103  O   GLU    18      10.699  -1.712  14.875  1.00  0.00
ATOM    104  C   GLU    18      10.092  -1.699  15.940  1.00  0.00
ATOM    105  N   ARG    19       9.267  -2.672  16.296  1.00  0.00
ATOM    106  CA  ARG    19       9.048  -3.821  15.424  1.00  0.00
ATOM    107  CB  ARG    19       8.319  -4.934  16.177  1.00  0.00
ATOM    108  CG  ARG    19       9.167  -5.631  17.230  1.00  0.00
ATOM    109  CD  ARG    19       8.359  -6.670  17.991  1.00  0.00
ATOM    110  NE  ARG    19       9.159  -7.346  19.009  1.00  0.00
ATOM    111  CZ  ARG    19       8.676  -8.239  19.865  1.00  0.00
ATOM    112  NH1 ARG    19       9.478  -8.804  20.757  1.00  0.00
ATOM    113  NH2 ARG    19       7.392  -8.568  19.829  1.00  0.00
ATOM    114  O   ARG    19       8.415  -3.909  13.101  1.00  0.00
ATOM    115  C   ARG    19       8.204  -3.419  14.215  1.00  0.00
ATOM    116  N   LEU    20       7.254  -2.516  14.427  1.00  0.00
ATOM    117  CA  LEU    20       6.395  -2.063  13.332  1.00  0.00
ATOM    118  CB  LEU    20       5.301  -1.132  13.860  1.00  0.00
ATOM    119  CG  LEU    20       4.227  -1.779  14.737  1.00  0.00
ATOM    120  CD1 LEU    20       3.313  -0.720  15.335  1.00  0.00
ATOM    121  CD2 LEU    20       3.373  -2.738  13.921  1.00  0.00
ATOM    122  O   LEU    20       7.010  -1.503  11.081  1.00  0.00
ATOM    123  C   LEU    20       7.198  -1.299  12.277  1.00  0.00
ATOM    124  N   LYS    21       8.095  -0.429  12.736  1.00  0.00
ATOM    125  CA  LYS    21       8.957   0.345  11.848  1.00  0.00
ATOM    126  CB  LYS    21       9.834   1.304  12.654  1.00  0.00
ATOM    127  CG  LYS    21      10.735   2.186  11.805  1.00  0.00
ATOM    128  CD  LYS    21      11.518   3.166  12.663  1.00  0.00
ATOM    129  CE  LYS    21      12.440   4.027  11.815  1.00  0.00
ATOM    130  NZ  LYS    21      13.226   4.983  12.644  1.00  0.00
ATOM    131  O   LYS    21      10.161  -0.321   9.859  1.00  0.00
ATOM    132  C   LYS    21       9.874  -0.573  11.038  1.00  0.00
ATOM    133  N   LEU    22      10.380  -1.623  11.663  1.00  0.00
ATOM    134  CA  LEU    22      11.292  -2.486  10.922  1.00  0.00
ATOM    135  CB  LEU    22      11.983  -3.470  11.866  1.00  0.00
ATOM    136  CG  LEU    22      12.990  -2.875  12.851  1.00  0.00
ATOM    137  CD1 LEU    22      13.463  -3.927  13.840  1.00  0.00
ATOM    138  CD2 LEU    22      14.205  -2.332  12.115  1.00  0.00
ATOM    139  O   LEU    22      10.880  -3.372   8.726  1.00  0.00
ATOM    140  C   LEU    22      10.482  -3.256   9.883  1.00  0.00
ATOM    141  N   GLU    23       9.325  -3.740  10.292  1.00  0.00
ATOM    142  CA  GLU    23       8.451  -4.450   9.393  1.00  0.00
ATOM    143  CB  GLU    23       7.164  -4.863  10.110  1.00  0.00
ATOM    144  CG  GLU    23       6.201  -5.659   9.246  1.00  0.00
ATOM    145  CD  GLU    23       4.954  -6.079  10.000  1.00  0.00
ATOM    146  OE1 GLU    23       4.849  -5.757  11.202  1.00  0.00
ATOM    147  OE2 GLU    23       4.081  -6.730   9.388  1.00  0.00
ATOM    148  O   GLU    23       8.238  -3.924   7.068  1.00  0.00
ATOM    149  C   GLU    23       8.115  -3.521   8.226  1.00  0.00
ATOM    150  N   ASN    24       7.720  -2.280   8.524  1.00  0.00
ATOM    151  CA  ASN    24       7.400  -1.319   7.469  1.00  0.00
ATOM    152  CB  ASN    24       7.039   0.039   8.074  1.00  0.00
ATOM    153  CG  ASN    24       5.675   0.038   8.736  1.00  0.00
ATOM    154  ND2 ASN    24       5.448   1.004   9.620  1.00  0.00
ATOM    155  OD1 ASN    24       4.840  -0.821   8.456  1.00  0.00
ATOM    156  O   ASN    24       8.392  -1.019   5.353  1.00  0.00
ATOM    157  C   ASN    24       8.577  -1.130   6.548  1.00  0.00
ATOM    158  N   LYS    25       9.786  -1.075   7.092  1.00  0.00
ATOM    159  CA  LYS    25      10.959  -0.911   6.238  1.00  0.00
ATOM    160  CB  LYS    25      12.216  -0.717   7.087  1.00  0.00
ATOM    161  CG  LYS    25      12.277   0.619   7.810  1.00  0.00
ATOM    162  CD  LYS    25      13.553   0.747   8.628  1.00  0.00
ATOM    163  CE  LYS    25      13.598   2.069   9.376  1.00  0.00
ATOM    164  NZ  LYS    25      14.831   2.197  10.202  1.00  0.00
ATOM    165  O   LYS    25      11.546  -2.030   4.181  1.00  0.00
ATOM    166  C   LYS    25      11.159  -2.145   5.355  1.00  0.00
ATOM    167  N   THR    26      10.878  -3.325   5.904  1.00  0.00
ATOM    168  CA  THR    26      11.058  -4.544   5.134  1.00  0.00
ATOM    169  CB  THR    26      10.951  -5.796   6.024  1.00  0.00
ATOM    170  CG2 THR    26      11.104  -7.059   5.191  1.00  0.00
ATOM    171  OG1 THR    26      11.984  -5.768   7.018  1.00  0.00
ATOM    172  O   THR    26      10.334  -5.074   2.912  1.00  0.00
ATOM    173  C   THR    26      10.005  -4.678   4.035  1.00  0.00
ATOM    174  N   LEU    27       8.753  -4.338   4.351  1.00  0.00
ATOM    175  CA  LEU    27       7.690  -4.392   3.360  1.00  0.00
ATOM    176  CB  LEU    27       6.365  -3.934   3.971  1.00  0.00
ATOM    177  CG  LEU    27       5.738  -4.867   5.009  1.00  0.00
ATOM    178  CD1 LEU    27       4.531  -4.212   5.662  1.00  0.00
ATOM    179  CD2 LEU    27       5.281  -6.166   4.359  1.00  0.00
ATOM    180  O   LEU    27       7.899  -3.867   1.031  1.00  0.00
ATOM    181  C   LEU    27       8.039  -3.470   2.178  1.00  0.00
ATOM    182  N   LYS    28       8.523  -2.260   2.457  1.00  0.00
ATOM    183  CA  LYS    28       8.912  -1.332   1.391  1.00  0.00
ATOM    184  CB  LYS    28       9.419  -0.017   1.986  1.00  0.00
ATOM    185  CG  LYS    28       8.335   0.831   2.632  1.00  0.00
ATOM    186  CD  LYS    28       8.906   2.121   3.196  1.00  0.00
ATOM    187  CE  LYS    28       7.826   2.957   3.864  1.00  0.00
ATOM    188  NZ  LYS    28       8.377   4.209   4.453  1.00  0.00
ATOM    189  O   LYS    28      10.029  -1.764  -0.683  1.00  0.00
ATOM    190  C   LYS    28      10.021  -1.920   0.531  1.00  0.00
ATOM    191  N   GLN    29      10.984  -2.576   1.173  1.00  0.00
ATOM    192  CA  GLN    29      12.087  -3.202   0.453  1.00  0.00
ATOM    193  CB  GLN    29      13.051  -3.875   1.431  1.00  0.00
ATOM    194  CG  GLN    29      13.866  -2.901   2.268  1.00  0.00
ATOM    195  CD  GLN    29      14.726  -3.601   3.302  1.00  0.00
ATOM    196  OE1 GLN    29      14.654  -4.820   3.464  1.00  0.00
ATOM    197  NE2 GLN    29      15.545  -2.829   4.009  1.00  0.00
ATOM    198  O   GLN    29      11.926  -4.373  -1.679  1.00  0.00
ATOM    199  C   GLN    29      11.521  -4.265  -0.510  1.00  0.00
ATOM    200  N   LYS    30      10.563  -5.036  -0.016  1.00  0.00
ATOM    201  CA  LYS    30       9.954  -6.084  -0.814  1.00  0.00
ATOM    202  CB  LYS    30       8.947  -6.877   0.020  1.00  0.00
ATOM    203  CG  LYS    30       8.287  -8.025  -0.728  1.00  0.00
ATOM    204  CD  LYS    30       7.355  -8.811   0.179  1.00  0.00
ATOM    205  CE  LYS    30       6.659  -9.928  -0.581  1.00  0.00
ATOM    206  NZ  LYS    30       5.722 -10.693   0.290  1.00  0.00
ATOM    207  O   LYS    30       9.368  -6.042  -3.118  1.00  0.00
ATOM    208  C   LYS    30       9.214  -5.541  -2.018  1.00  0.00
ATOM    209  N   VAL    31       8.392  -4.524  -1.795  1.00  0.00
ATOM    210  CA  VAL    31       7.608  -3.922  -2.863  1.00  0.00
ATOM    211  CB  VAL    31       6.711  -2.788  -2.334  1.00  0.00
ATOM    212  CG1 VAL    31       6.054  -2.045  -3.488  1.00  0.00
ATOM    213  CG2 VAL    31       5.615  -3.350  -1.439  1.00  0.00
ATOM    214  O   VAL    31       8.344  -3.476  -5.111  1.00  0.00
ATOM    215  C   VAL    31       8.556  -3.345  -3.914  1.00  0.00
ATOM    216  N   LYS    32       9.627  -2.738  -3.435  1.00  0.00
ATOM    217  CA  LYS    32      10.642  -2.131  -4.269  1.00  0.00
ATOM    218  CB  LYS    32      11.711  -1.456  -3.408  1.00  0.00
ATOM    219  CG  LYS    32      12.800  -0.756  -4.204  1.00  0.00
ATOM    220  CD  LYS    32      13.785  -0.048  -3.289  1.00  0.00
ATOM    221  CE  LYS    32      14.902   0.611  -4.083  1.00  0.00
ATOM    222  NZ  LYS    32      15.889   1.288  -3.197  1.00  0.00
ATOM    223  O   LYS    32      11.494  -3.046  -6.326  1.00  0.00
ATOM    224  C   LYS    32      11.298  -3.217  -5.125  1.00  0.00
ATOM    225  N   SER    33      11.622  -4.339  -4.490  1.00  0.00
ATOM    226  CA  SER    33      12.253  -5.488  -5.144  1.00  0.00
ATOM    227  CB  SER    33      12.505  -6.608  -4.133  1.00  0.00
ATOM    228  OG  SER    33      13.472  -6.220  -3.172  1.00  0.00
ATOM    229  O   SER    33      11.683  -6.093  -7.422  1.00  0.00
ATOM    230  C   SER    33      11.322  -5.996  -6.243  1.00  0.00
ATOM    234  N   SER    56      10.104  -6.301  -5.831  1.00  0.00
ATOM    235  CA  SER    56       9.105  -6.840  -6.719  1.00  0.00
ATOM    236  CB  SER    56       7.841  -7.209  -5.941  1.00  0.00
ATOM    237  OG  SER    56       7.215  -6.056  -5.405  1.00  0.00
ATOM    238  O   SER    56       8.376  -6.314  -8.922  1.00  0.00
ATOM    239  C   SER    56       8.681  -5.890  -7.804  1.00  0.00
ATOM    240  N   SER    57       8.672  -4.603  -7.493  1.00  0.00
ATOM    241  CA  SER    57       8.291  -3.637  -8.499  1.00  0.00
ATOM    242  CB  SER    57       8.181  -2.239  -7.885  1.00  0.00
ATOM    243  OG  SER    57       7.117  -2.174  -6.950  1.00  0.00
ATOM    244  O   SER    57       9.080  -3.741 -10.753  1.00  0.00
ATOM    245  C   SER    57       9.386  -3.669  -9.563  1.00  0.00
ATOM    246  N   ARG    58      10.651  -3.678  -9.152  1.00  0.00
ATOM    247  CA  ARG    58      11.763  -3.732 -10.107  1.00  0.00
ATOM    248  CB  ARG    58      13.104  -3.666  -9.373  1.00  0.00
ATOM    249  CG  ARG    58      13.420  -2.302  -8.783  1.00  0.00
ATOM    250  CD  ARG    58      14.870  -2.218  -8.333  1.00  0.00
ATOM    251  NE  ARG    58      15.158  -3.140  -7.235  1.00  0.00
ATOM    252  CZ  ARG    58      14.978  -2.852  -5.950  1.00  0.00
ATOM    253  NH1 ARG    58      15.267  -3.753  -5.022  1.00  0.00
ATOM    254  NH2 ARG    58      14.512  -1.662  -5.597  1.00  0.00
ATOM    255  O   ARG    58      12.039  -5.077 -12.135  1.00  0.00
ATOM    256  C   ARG    58      11.722  -5.038 -10.919  1.00  0.00
ATOM    257  N   ALA    59      11.336  -6.116 -10.248  1.00  0.00
ATOM    258  CA  ALA    59      11.232  -7.410 -10.902  1.00  0.00
ATOM    259  CB  ALA    59      10.860  -8.485  -9.892  1.00  0.00
ATOM    260  O   ALA    59      10.352  -7.992 -13.068  1.00  0.00
ATOM    261  C   ALA    59      10.156  -7.402 -12.004  1.00  0.00
ATOM    262  N   LEU    60       9.033  -6.727 -11.769  1.00  0.00
ATOM    263  CA  LEU    60       7.967  -6.659 -12.777  1.00  0.00
ATOM    264  CB  LEU    60       6.763  -5.888 -12.231  1.00  0.00
ATOM    265  CG  LEU    60       5.577  -5.724 -13.184  1.00  0.00
ATOM    266  CD1 LEU    60       5.002  -7.078 -13.567  1.00  0.00
ATOM    267  CD2 LEU    60       4.473  -4.906 -12.530  1.00  0.00
ATOM    268  O   LEU    60       8.405  -6.403 -15.126  1.00  0.00
ATOM    269  C   LEU    60       8.534  -5.944 -13.991  1.00  0.00
ATOM    270  N   GLY    61       9.180  -4.814 -13.738  1.00  0.00
ATOM    271  CA  GLY    61       9.778  -4.027 -14.799  1.00  0.00
ATOM    272  O   GLY    61      10.822  -4.686 -16.843  1.00  0.00
ATOM    273  C   GLY    61      10.795  -4.801 -15.616  1.00  0.00
ATOM    274  N   ALA    62      11.647  -5.575 -14.948  1.00  0.00
ATOM    275  CA  ALA    62      12.642  -6.354 -15.671  1.00  0.00
ATOM    276  CB  ALA    62      13.636  -6.973 -14.700  1.00  0.00
ATOM    277  O   ALA    62      12.440  -7.879 -17.510  1.00  0.00
ATOM    278  C   ALA    62      11.964  -7.477 -16.458  1.00  0.00
ATOM    279  N   VAL    63      10.838  -7.974 -15.968  1.00  0.00
ATOM    280  CA  VAL    63      10.141  -9.029 -16.697  1.00  0.00
ATOM    281  CB  VAL    63       9.004  -9.639 -15.858  1.00  0.00
ATOM    282  CG1 VAL    63       8.176 -10.597 -16.700  1.00  0.00
ATOM    283  CG2 VAL    63       9.569 -10.407 -14.673  1.00  0.00
ATOM    284  O   VAL    63       9.555  -9.122 -19.046  1.00  0.00
ATOM    285  C   VAL    63       9.529  -8.479 -17.988  1.00  0.00
ATOM    286  N   ALA    64       8.973  -7.283 -17.894  1.00  0.00
ATOM    287  CA  ALA    64       8.357  -6.666 -19.054  1.00  0.00
ATOM    288  CB  ALA    64       7.651  -5.378 -18.660  1.00  0.00
ATOM    289  O   ALA    64       9.210  -6.555 -21.289  1.00  0.00
ATOM    290  C   ALA    64       9.419  -6.346 -20.094  1.00  0.00
ATOM    291  N   MET    65      10.558  -5.840 -19.638  1.00  0.00
ATOM    292  CA  MET    65      11.645  -5.518 -20.546  1.00  0.00
ATOM    293  CB  MET    65      12.846  -4.974 -19.771  1.00  0.00
ATOM    294  CG  MET    65      12.624  -3.599 -19.164  1.00  0.00
ATOM    295  SD  MET    65      14.011  -3.053 -18.153  1.00  0.00
ATOM    296  CE  MET    65      15.269  -2.810 -19.404  1.00  0.00
ATOM    297  O   MET    65      12.197  -6.800 -22.499  1.00  0.00
ATOM    298  C   MET    65      12.041  -6.797 -21.280  1.00  0.00
ATOM    299  N   ARG    66      12.202  -7.892 -20.546  1.00  0.00
ATOM    300  CA  ARG    66      12.578  -9.150 -21.188  1.00  0.00
ATOM    301  CB  ARG    66      12.723 -10.260 -20.145  1.00  0.00
ATOM    302  CG  ARG    66      13.939 -10.113 -19.245  1.00  0.00
ATOM    303  CD  ARG    66      13.981 -11.205 -18.190  1.00  0.00
ATOM    304  NE  ARG    66      15.131 -11.062 -17.298  1.00  0.00
ATOM    305  CZ  ARG    66      15.363 -11.840 -16.247  1.00  0.00
ATOM    306  NH1 ARG    66      16.433 -11.636 -15.493  1.00  0.00
ATOM    307  NH2 ARG    66      14.522 -12.824 -15.953  1.00  0.00
ATOM    308  O   ARG    66      11.870 -10.084 -23.287  1.00  0.00
ATOM    309  C   ARG    66      11.535  -9.602 -22.207  1.00  0.00
ATOM    310  N   LYS    67      10.263  -9.467 -21.858  1.00  0.00
ATOM    311  CA  LYS    67       9.202  -9.890 -22.771  1.00  0.00
ATOM    312  CB  LYS    67       7.830  -9.720 -22.114  1.00  0.00
ATOM    313  CG  LYS    67       7.556 -10.704 -20.986  1.00  0.00
ATOM    314  CD  LYS    67       6.180 -10.481 -20.382  1.00  0.00
ATOM    315  CE  LYS    67       5.916 -11.447 -19.238  1.00  0.00
ATOM    316  NZ  LYS    67       4.585 -11.219 -18.615  1.00  0.00
ATOM    317  O   LYS    67       9.173  -9.571 -25.133  1.00  0.00
ATOM    318  C   LYS    67       9.246  -9.048 -24.035  1.00  0.00
ATOM    319  N   ILE    68       9.427  -7.747 -23.874  1.00  0.00
ATOM    320  CA  ILE    68       9.486  -6.839 -25.013  1.00  0.00
ATOM    321  CB  ILE    68       9.532  -5.368 -24.560  1.00  0.00
ATOM    322  CG1 ILE    68       8.209  -4.969 -23.904  1.00  0.00
ATOM    323  CG2 ILE    68       9.776  -4.452 -25.750  1.00  0.00
ATOM    324  CD1 ILE    68       8.256  -3.633 -23.197  1.00  0.00
ATOM    325  O   ILE    68      10.585  -6.872 -27.146  1.00  0.00
ATOM    326  C   ILE    68      10.696  -7.023 -25.922  1.00  0.00
ATOM    327  N   GLU    69      11.855  -7.286 -25.327  1.00  0.00
ATOM    328  CA  GLU    69      13.047  -7.483 -26.130  1.00  0.00
ATOM    329  CB  GLU    69      14.264  -7.721 -25.234  1.00  0.00
ATOM    330  CG  GLU    69      14.722  -6.490 -24.471  1.00  0.00
ATOM    331  CD  GLU    69      15.850  -6.791 -23.502  1.00  0.00
ATOM    332  OE1 GLU    69      16.223  -7.978 -23.376  1.00  0.00
ATOM    333  OE2 GLU    69      16.360  -5.843 -22.870  1.00  0.00
ATOM    334  O   GLU    69      13.203  -8.748 -28.151  1.00  0.00
ATOM    335  C   GLU    69      12.776  -8.692 -26.993  1.00  0.00
ATOM    336  N   ALA    70      12.056  -9.660 -26.435  1.00  0.00
ATOM    337  CA  ALA    70      11.722 -10.855 -27.187  1.00  0.00
ATOM    338  CB  ALA    70      11.000 -11.857 -26.298  1.00  0.00
ATOM    339  O   ALA    70      11.057 -10.859 -29.493  1.00  0.00
ATOM    340  C   ALA    70      10.814 -10.469 -28.352  1.00  0.00
ATOM    341  N   LYS    71       9.767  -9.705 -28.060  1.00  0.00
ATOM    342  CA  LYS    71       8.823  -9.283 -29.090  1.00  0.00
ATOM    343  CB  LYS    71       7.768  -8.344 -28.498  1.00  0.00
ATOM    344  CG  LYS    71       6.783  -9.028 -27.565  1.00  0.00
ATOM    345  CD  LYS    71       5.765  -8.042 -27.018  1.00  0.00
ATOM    346  CE  LYS    71       4.794  -8.720 -26.064  1.00  0.00
ATOM    347  NZ  LYS    71       3.812  -7.758 -25.494  1.00  0.00
ATOM    348  O   LYS    71       9.354  -8.774 -31.386  1.00  0.00
ATOM    349  C   LYS    71       9.579  -8.546 -30.199  1.00  0.00
ATOM    350  N   VAL    72      10.502  -7.681 -29.804  1.00  0.00
ATOM    351  CA  VAL    72      11.279  -6.906 -30.750  1.00  0.00
ATOM    352  CB  VAL    72      12.162  -5.865 -30.037  1.00  0.00
ATOM    353  CG1 VAL    72      13.104  -5.198 -31.027  1.00  0.00
ATOM    354  CG2 VAL    72      11.303  -4.792 -29.390  1.00  0.00
ATOM    355  O   VAL    72      12.328  -7.488 -32.823  1.00  0.00
ATOM    356  C   VAL    72      12.230  -7.728 -31.621  1.00  0.00
ATOM    357  N   ARG    73      12.928  -8.703 -31.047  1.00  0.00
ATOM    358  CA  ARG    73      13.856  -9.481 -31.862  1.00  0.00
ATOM    359  CB  ARG    73      14.798 -10.294 -30.972  1.00  0.00
ATOM    360  CG  ARG    73      15.815  -9.454 -30.216  1.00  0.00
ATOM    361  CD  ARG    73      16.684 -10.318 -29.316  1.00  0.00
ATOM    362  NE  ARG    73      17.627  -9.519 -28.536  1.00  0.00
ATOM    363  CZ  ARG    73      18.348  -9.993 -27.523  1.00  0.00
ATOM    364  NH1 ARG    73      19.179  -9.192 -26.871  1.00  0.00
ATOM    365  NH2 ARG    73      18.232 -11.264 -27.165  1.00  0.00
ATOM    366  O   ARG    73      13.547 -10.858 -33.790  1.00  0.00
ATOM    367  C   ARG    73      13.071 -10.429 -32.746  1.00  0.00
ATOM    368  N   SER    74      11.860 -10.751 -32.314  1.00  0.00
ATOM    369  CA  SER    74      11.002 -11.623 -33.092  1.00  0.00
ATOM    370  CB  SER    74       9.736 -11.971 -32.304  1.00  0.00
ATOM    371  OG  SER    74      10.045 -12.750 -31.162  1.00  0.00
ATOM    372  O   SER    74      10.638 -11.507 -35.461  1.00  0.00
ATOM    373  C   SER    74      10.609 -10.909 -34.385  1.00  0.00
ATOM    374  N   ARG    75      10.278  -9.622 -34.286  1.00  0.00
ATOM    375  CA  ARG    75       9.901  -8.852 -35.469  1.00  0.00
ATOM    376  CB  ARG    75       9.612  -7.398 -35.091  1.00  0.00
ATOM    377  CG  ARG    75       9.145  -6.537 -36.252  1.00  0.00
ATOM    378  CD  ARG    75       9.002  -5.080 -35.838  1.00  0.00
ATOM    379  NE  ARG    75      10.294  -4.469 -35.533  1.00  0.00
ATOM    380  CZ  ARG    75      11.154  -4.043 -36.452  1.00  0.00
ATOM    381  NH1 ARG    75      12.305  -3.500 -36.080  1.00  0.00
ATOM    382  NH2 ARG    75      10.861  -4.160 -37.740  1.00  0.00
ATOM    383  O   ARG    75      10.844  -9.374 -37.618  1.00  0.00
ATOM    384  C   ARG    75      11.014  -8.858 -36.504  1.00  0.00
ATOM    385  N   ALA    76      12.165  -8.317 -36.126  1.00  0.00
ATOM    386  CA  ALA    76      13.287  -8.247 -37.045  1.00  0.00
ATOM    387  CB  ALA    76      14.500  -7.644 -36.354  1.00  0.00
ATOM    388  O   ALA    76      14.511  -9.606 -38.595  1.00  0.00
ATOM    389  C   ALA    76      13.759  -9.585 -37.620  1.00  0.00
ATOM    390  N   ALA    77      13.319 -10.694 -37.036  1.00  0.00
ATOM    391  CA  ALA    77      13.707 -12.005 -37.544  1.00  0.00
ATOM    392  CB  ALA    77      13.745 -13.021 -36.414  1.00  0.00
ATOM    393  O   ALA    77      13.054 -13.020 -39.596  1.00  0.00
ATOM    394  C   ALA    77      12.698 -12.435 -38.574  1.00  0.00
ATOM    395  N   LYS    78      11.428 -12.148 -38.293  1.00  0.00
ATOM    396  CA  LYS    78      10.359 -12.501 -39.214  1.00  0.00
ATOM    397  CB  LYS    78       8.994 -12.205 -38.589  1.00  0.00
ATOM    398  CG  LYS    78       8.657 -13.081 -37.392  1.00  0.00
ATOM    399  CD  LYS    78       7.261 -12.784 -36.869  1.00  0.00
ATOM    400  CE  LYS    78       6.932 -13.643 -35.658  1.00  0.00
ATOM    401  NZ  LYS    78       5.578 -13.344 -35.116  1.00  0.00
ATOM    402  O   LYS    78      10.149 -12.032 -41.551  1.00  0.00
ATOM    403  C   LYS    78      10.577 -11.648 -40.462  1.00  0.00
TER
END



