
PFRMAT TS
TARGET T0327
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0327 model 5 Mon Jun 12 12:28:15 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   GLY    27      -9.204  -2.837   6.344  1.00  0.00
ATOM      3  CA  GLY    27     -10.042  -1.668   6.617  1.00  0.00
ATOM      4  O   GLY    27     -11.741  -0.269   5.701  1.00  0.00
ATOM      5  C   GLY    27     -10.903  -1.150   5.472  1.00  0.00
ATOM      6  N   VAL    28     -10.694  -1.652   4.248  1.00  0.00
ATOM      7  CA  VAL    28     -11.501  -1.216   3.101  1.00  0.00
ATOM      8  CB  VAL    28     -10.720  -1.346   1.781  1.00  0.00
ATOM      9  CG1 VAL    28     -11.600  -0.958   0.601  1.00  0.00
ATOM     10  CG2 VAL    28      -9.501  -0.434   1.790  1.00  0.00
ATOM     11  O   VAL    28     -12.726  -3.313   3.073  1.00  0.00
ATOM     12  C   VAL    28     -12.772  -2.066   2.982  1.00  0.00
ATOM     13  N   THR    29     -13.912  -1.405   2.806  1.00  0.00
ATOM     14  CA  THR    29     -15.132  -2.136   2.480  1.00  0.00
ATOM     15  CB  THR    29     -16.387  -1.272   2.704  1.00  0.00
ATOM     16  CG2 THR    29     -16.567  -0.969   4.184  1.00  0.00
ATOM     17  OG1 THR    29     -16.252  -0.037   1.992  1.00  0.00
ATOM     18  O   THR    29     -14.352  -2.060   0.184  1.00  0.00
ATOM     19  C   THR    29     -15.128  -2.585   0.995  1.00  0.00
ATOM     23  N   PHE    33     -13.777  -0.110  -2.243  1.00  0.00
ATOM     24  CA  PHE    33     -12.803  -0.742  -3.130  1.00  0.00
ATOM     25  CB  PHE    33     -12.511  -2.173  -2.672  1.00  0.00
ATOM     26  CG  PHE    33     -11.547  -2.909  -3.559  1.00  0.00
ATOM     27  CD1 PHE    33     -10.184  -2.687  -3.456  1.00  0.00
ATOM     28  CD2 PHE    33     -12.001  -3.821  -4.494  1.00  0.00
ATOM     29  CE1 PHE    33      -9.296  -3.364  -4.272  1.00  0.00
ATOM     30  CE2 PHE    33     -11.115  -4.497  -5.310  1.00  0.00
ATOM     31  CZ  PHE    33      -9.767  -4.272  -5.201  1.00  0.00
ATOM     32  O   PHE    33     -12.698  -0.359  -5.505  1.00  0.00
ATOM     33  C   PHE    33     -13.353  -0.787  -4.576  1.00  0.00
ATOM     34  N   ASP    34     -14.586  -1.227  -4.738  1.00  0.00
ATOM     35  CA  ASP    34     -15.215  -1.236  -6.045  1.00  0.00
ATOM     36  CB  ASP    34     -16.669  -1.698  -5.936  1.00  0.00
ATOM     37  CG  ASP    34     -16.789  -3.185  -5.663  1.00  0.00
ATOM     38  OD1 ASP    34     -15.771  -3.896  -5.791  1.00  0.00
ATOM     39  OD2 ASP    34     -17.901  -3.638  -5.320  1.00  0.00
ATOM     40  O   ASP    34     -14.958   0.352  -7.852  1.00  0.00
ATOM     41  C   ASP    34     -15.189   0.174  -6.644  1.00  0.00
ATOM     42  N   ASP    35     -15.372   1.169  -5.786  1.00  0.00
ATOM     43  CA  ASP    35     -15.473   2.532  -6.240  1.00  0.00
ATOM     44  CB  ASP    35     -15.995   3.432  -5.118  1.00  0.00
ATOM     45  CG  ASP    35     -17.469   3.222  -4.839  1.00  0.00
ATOM     46  OD1 ASP    35     -18.142   2.568  -5.664  1.00  0.00
ATOM     47  OD2 ASP    35     -17.953   3.709  -3.797  1.00  0.00
ATOM     48  O   ASP    35     -14.056   3.711  -7.772  1.00  0.00
ATOM     49  C   ASP    35     -14.115   3.111  -6.699  1.00  0.00
ATOM     50  N   ALA    36     -13.034   2.884  -5.941  1.00  0.00
ATOM     51  CA  ALA    36     -11.665   3.202  -6.412  1.00  0.00
ATOM     52  CB  ALA    36     -10.642   2.854  -5.342  1.00  0.00
ATOM     53  O   ALA    36     -10.737   3.031  -8.609  1.00  0.00
ATOM     54  C   ALA    36     -11.273   2.446  -7.665  1.00  0.00
ATOM     55  N   VAL    37     -11.551   1.146  -7.693  1.00  0.00
ATOM     56  CA  VAL    37     -11.146   0.323  -8.828  1.00  0.00
ATOM     57  CB  VAL    37     -11.564  -1.147  -8.639  1.00  0.00
ATOM     58  CG1 VAL    37     -11.312  -1.942  -9.911  1.00  0.00
ATOM     59  CG2 VAL    37     -10.770  -1.784  -7.508  1.00  0.00
ATOM     60  O   VAL    37     -11.163   0.897 -11.137  1.00  0.00
ATOM     61  C   VAL    37     -11.793   0.844 -10.077  1.00  0.00
ATOM     62  N   ASN    38     -13.059   1.217  -9.958  1.00  0.00
ATOM     63  CA  ASN    38     -13.781   1.810 -11.068  1.00  0.00
ATOM     64  CB  ASN    38     -15.247   2.036 -10.695  1.00  0.00
ATOM     65  CG  ASN    38     -16.038   0.744 -10.631  1.00  0.00
ATOM     66  ND2 ASN    38     -17.175   0.783  -9.947  1.00  0.00
ATOM     67  OD1 ASN    38     -15.630  -0.273 -11.191  1.00  0.00
ATOM     68  O   ASN    38     -13.160   3.410 -12.770  1.00  0.00
ATOM     69  C   ASN    38     -13.259   3.192 -11.563  1.00  0.00
ATOM     70  N   PHE    39     -12.975   4.109 -10.639  1.00  0.00
ATOM     71  CA  PHE    39     -12.395   5.410 -10.997  1.00  0.00
ATOM     72  CB  PHE    39     -12.207   6.274  -9.750  1.00  0.00
ATOM     73  CG  PHE    39     -11.609   7.624 -10.032  1.00  0.00
ATOM     74  CD1 PHE    39     -12.390   8.651 -10.532  1.00  0.00
ATOM     75  CD2 PHE    39     -10.267   7.866  -9.796  1.00  0.00
ATOM     76  CE1 PHE    39     -11.840   9.892 -10.791  1.00  0.00
ATOM     77  CE2 PHE    39      -9.718   9.107 -10.055  1.00  0.00
ATOM     78  CZ  PHE    39     -10.498  10.118 -10.550  1.00  0.00
ATOM     79  O   PHE    39     -10.716   5.934 -12.633  1.00  0.00
ATOM     80  C   PHE    39     -11.023   5.244 -11.672  1.00  0.00
ATOM     81  N   LEU    40     -10.224   4.298 -11.196  1.00  0.00
ATOM     82  CA  LEU    40      -8.914   4.038 -11.780  1.00  0.00
ATOM     83  CB  LEU    40      -8.099   3.110 -10.875  1.00  0.00
ATOM     84  CG  LEU    40      -7.657   3.694  -9.531  1.00  0.00
ATOM     85  CD1 LEU    40      -6.995   2.625  -8.674  1.00  0.00
ATOM     86  CD2 LEU    40      -6.661   4.824  -9.735  1.00  0.00
ATOM     87  O   LEU    40      -8.133   3.645 -13.995  1.00  0.00
ATOM     88  C   LEU    40      -8.985   3.376 -13.141  1.00  0.00
ATOM     89  N   LYS    41      -9.988   2.527 -13.359  1.00  0.00
ATOM     90  CA  LYS    41     -10.166   1.881 -14.665  1.00  0.00
ATOM     91  CB  LYS    41     -11.220   0.775 -14.576  1.00  0.00
ATOM     92  CG  LYS    41     -11.424   0.008 -15.872  1.00  0.00
ATOM     93  CD  LYS    41     -12.413  -1.133 -15.689  1.00  0.00
ATOM     94  CE  LYS    41     -12.637  -1.884 -16.990  1.00  0.00
ATOM     95  NZ  LYS    41     -13.619  -2.991 -16.831  1.00  0.00
ATOM     96  O   LYS    41     -10.088   2.867 -16.865  1.00  0.00
ATOM     97  C   LYS    41     -10.624   2.867 -15.735  1.00  0.00
ATOM     98  N   ARG    42     -11.588   3.723 -15.392  1.00  0.00
ATOM     99  CA  ARG    42     -12.064   4.683 -16.382  1.00  0.00
ATOM    100  CB  ARG    42     -13.360   5.345 -15.907  1.00  0.00
ATOM    101  CG  ARG    42     -14.564   4.416 -15.900  1.00  0.00
ATOM    102  CD  ARG    42     -15.802   5.121 -15.374  1.00  0.00
ATOM    103  NE  ARG    42     -16.954   4.226 -15.302  1.00  0.00
ATOM    104  CZ  ARG    42     -18.092   4.521 -14.682  1.00  0.00
ATOM    105  NH1 ARG    42     -19.087   3.644 -14.669  1.00  0.00
ATOM    106  NH2 ARG    42     -18.235   5.692 -14.078  1.00  0.00
ATOM    107  O   ARG    42     -11.166   6.424 -17.726  1.00  0.00
ATOM    108  C   ARG    42     -11.074   5.801 -16.663  1.00  0.00
ATOM    109  N   GLU    43     -10.114   6.010 -15.749  1.00  0.00
ATOM    110  CA  GLU    43      -8.979   6.901 -15.988  1.00  0.00
ATOM    111  CB  GLU    43      -8.253   7.207 -14.677  1.00  0.00
ATOM    112  CG  GLU    43      -9.069   8.027 -13.692  1.00  0.00
ATOM    113  CD  GLU    43      -9.471   9.378 -14.251  1.00  0.00
ATOM    114  OE1 GLU    43      -8.574  10.136 -14.675  1.00  0.00
ATOM    115  OE2 GLU    43     -10.684   9.676 -14.266  1.00  0.00
ATOM    116  O   GLU    43      -7.247   6.948 -17.631  1.00  0.00
ATOM    117  C   GLU    43      -7.974   6.261 -16.954  1.00  0.00
ATOM    118  N   GLY    44      -7.955   4.934 -17.038  1.00  0.00
ATOM    119  CA  GLY    44      -7.103   4.259 -18.013  1.00  0.00
ATOM    120  O   GLY    44      -4.919   3.261 -18.107  1.00  0.00
ATOM    121  C   GLY    44      -5.890   3.595 -17.390  1.00  0.00
ATOM    122  N   TYR    45      -5.944   3.389 -16.068  1.00  0.00
ATOM    123  CA  TYR    45      -4.801   2.888 -15.336  1.00  0.00
ATOM    124  CB  TYR    45      -4.708   3.559 -13.963  1.00  0.00
ATOM    125  CG  TYR    45      -4.450   5.047 -14.025  1.00  0.00
ATOM    126  CD1 TYR    45      -3.964   5.637 -15.185  1.00  0.00
ATOM    127  CD2 TYR    45      -4.691   5.858 -12.925  1.00  0.00
ATOM    128  CE1 TYR    45      -3.725   6.996 -15.252  1.00  0.00
ATOM    129  CE2 TYR    45      -4.458   7.219 -12.973  1.00  0.00
ATOM    130  CZ  TYR    45      -3.971   7.786 -14.149  1.00  0.00
ATOM    131  OH  TYR    45      -3.733   9.139 -14.212  1.00  0.00
ATOM    132  O   TYR    45      -3.862   0.743 -14.772  1.00  0.00
ATOM    133  C   TYR    45      -4.880   1.375 -15.105  1.00  0.00
ATOM    137  N   GLY    48      -9.309  -4.566 -16.393  1.00  0.00
ATOM    138  CA  GLY    48     -10.207  -5.413 -15.639  1.00  0.00
ATOM    139  O   GLY    48     -11.451  -6.411 -17.467  1.00  0.00
ATOM    140  C   GLY    48     -10.741  -6.594 -16.464  1.00  0.00
ATOM    141  N   VAL    49     -10.398  -7.805 -16.040  1.00  0.00
ATOM    142  CA  VAL    49     -10.839  -9.018 -16.751  1.00  0.00
ATOM    143  CB  VAL    49      -9.644  -9.903 -17.153  1.00  0.00
ATOM    144  CG1 VAL    49     -10.083 -10.978 -18.135  1.00  0.00
ATOM    145  CG2 VAL    49      -8.559  -9.064 -17.811  1.00  0.00
ATOM    146  O   VAL    49     -11.395 -10.278 -14.788  1.00  0.00
ATOM    147  C   VAL    49     -11.765  -9.872 -15.888  1.00  0.00
ATOM    151  N   SER    52     -16.363 -15.277 -15.340  1.00  0.00
ATOM    152  CA  SER    52     -17.701 -15.766 -14.953  1.00  0.00
ATOM    153  CB  SER    52     -18.674 -15.652 -16.129  1.00  0.00
ATOM    154  OG  SER    52     -18.303 -16.522 -17.184  1.00  0.00
ATOM    155  O   SER    52     -18.756 -17.697 -13.927  1.00  0.00
ATOM    156  C   SER    52     -17.750 -17.252 -14.496  1.00  0.00
ATOM    157  N   ASP    53     -16.674 -17.990 -14.750  1.00  0.00
ATOM    158  CA  ASP    53     -16.534 -19.400 -14.387  1.00  0.00
ATOM    159  CB  ASP    53     -15.226 -19.967 -14.943  1.00  0.00
ATOM    160  CG  ASP    53     -15.266 -20.157 -16.446  1.00  0.00
ATOM    161  OD1 ASP    53     -16.365 -20.051 -17.030  1.00  0.00
ATOM    162  OD2 ASP    53     -14.197 -20.409 -17.042  1.00  0.00
ATOM    163  O   ASP    53     -16.202 -18.596 -12.168  1.00  0.00
ATOM    164  C   ASP    53     -16.526 -19.548 -12.860  1.00  0.00
ATOM    165  N   ASP    54     -16.872 -20.728 -12.342  1.00  0.00
ATOM    166  CA  ASP    54     -17.066 -20.958 -10.895  1.00  0.00
ATOM    167  CB  ASP    54     -18.117 -22.046 -10.662  1.00  0.00
ATOM    168  CG  ASP    54     -19.524 -21.572 -10.972  1.00  0.00
ATOM    169  OD1 ASP    54     -19.727 -20.344 -11.077  1.00  0.00
ATOM    170  OD2 ASP    54     -20.422 -22.429 -11.111  1.00  0.00
ATOM    171  O   ASP    54     -15.178 -22.377 -10.456  1.00  0.00
ATOM    172  C   ASP    54     -15.813 -21.419 -10.099  1.00  0.00
ATOM    173  N   ARG    55     -15.457 -20.730  -9.005  1.00  0.00
ATOM    174  CA  ARG    55     -16.024 -19.465  -8.491  1.00  0.00
ATOM    175  CB  ARG    55     -15.539 -19.200  -7.065  1.00  0.00
ATOM    176  CG  ARG    55     -16.070 -20.183  -6.036  1.00  0.00
ATOM    177  CD  ARG    55     -15.533 -19.875  -4.648  1.00  0.00
ATOM    178  NE  ARG    55     -14.099 -20.131  -4.546  1.00  0.00
ATOM    179  CZ  ARG    55     -13.350 -19.788  -3.502  1.00  0.00
ATOM    180  NH1 ARG    55     -12.053 -20.062  -3.499  1.00  0.00
ATOM    181  NH2 ARG    55     -13.902 -19.169  -2.467  1.00  0.00
ATOM    182  O   ARG    55     -14.465 -18.253  -9.849  1.00  0.00
ATOM    183  C   ARG    55     -15.600 -18.274  -9.372  1.00  0.00
ATOM    184  N   PRO    56     -16.526 -17.303  -9.583  1.00  0.00
ATOM    185  CA  PRO    56     -16.218 -16.145 -10.436  1.00  0.00
ATOM    186  CB  PRO    56     -17.567 -15.442 -10.607  1.00  0.00
ATOM    187  CG  PRO    56     -18.351 -15.840  -9.402  1.00  0.00
ATOM    188  CD  PRO    56     -17.911 -17.236  -9.061  1.00  0.00
ATOM    189  O   PRO    56     -15.195 -15.107  -8.538  1.00  0.00
ATOM    190  C   PRO    56     -15.207 -15.257  -9.761  1.00  0.00
ATOM    191  N   HIS    57     -14.339 -14.681 -10.564  1.00  0.00
ATOM    192  CA  HIS    57     -13.446 -13.663 -10.060  1.00  0.00
ATOM    193  CB  HIS    57     -12.057 -14.249  -9.801  1.00  0.00
ATOM    194  CG  HIS    57     -12.044 -15.339  -8.776  1.00  0.00
ATOM    195  CD2 HIS    57     -11.967 -16.794  -8.807  1.00  0.00
ATOM    196  ND1 HIS    57     -12.113 -15.091  -7.422  1.00  0.00
ATOM    197  CE1 HIS    57     -12.080 -16.260  -6.759  1.00  0.00
ATOM    198  NE2 HIS    57     -11.992 -17.286  -7.585  1.00  0.00
ATOM    199  O   HIS    57     -13.704 -12.704 -12.250  1.00  0.00
ATOM    200  C   HIS    57     -13.335 -12.552 -11.085  1.00  0.00
ATOM    201  N   LEU    58     -12.859 -11.413 -10.617  1.00  0.00
ATOM    202  CA  LEU    58     -12.462 -10.353 -11.506  1.00  0.00
ATOM    203  CB  LEU    58     -13.348  -9.122 -11.300  1.00  0.00
ATOM    204  CG  LEU    58     -14.843  -9.311 -11.562  1.00  0.00
ATOM    205  CD1 LEU    58     -15.617  -8.055 -11.196  1.00  0.00
ATOM    206  CD2 LEU    58     -15.098  -9.615 -13.031  1.00  0.00
ATOM    207  O   LEU    58     -10.683  -9.955  -9.970  1.00  0.00
ATOM    208  C   LEU    58     -11.021 -10.056 -11.145  1.00  0.00
ATOM    209  N   TYR    59     -10.180  -9.957 -12.164  1.00  0.00
ATOM    210  CA  TYR    59      -8.770  -9.636 -12.002  1.00  0.00
ATOM    211  CB  TYR    59      -7.899 -10.666 -12.724  1.00  0.00
ATOM    212  CG  TYR    59      -7.994 -12.060 -12.143  1.00  0.00
ATOM    213  CD1 TYR    59      -8.878 -12.992 -12.672  1.00  0.00
ATOM    214  CD2 TYR    59      -7.198 -12.438 -11.070  1.00  0.00
ATOM    215  CE1 TYR    59      -8.971 -14.268 -12.148  1.00  0.00
ATOM    216  CE2 TYR    59      -7.277 -13.710 -10.533  1.00  0.00
ATOM    217  CZ  TYR    59      -8.173 -14.627 -11.083  1.00  0.00
ATOM    218  OH  TYR    59      -8.264 -15.895 -10.560  1.00  0.00
ATOM    219  O   TYR    59      -8.944  -7.849 -13.595  1.00  0.00
ATOM    220  C   TYR    59      -8.401  -8.273 -12.562  1.00  0.00
ATOM    221  N   PRO    63      -7.443  -7.637 -11.873  1.00  0.00
ATOM    222  CA  PRO    63      -6.943  -6.273 -12.135  1.00  0.00
ATOM    223  CB  PRO    63      -7.329  -5.489 -10.879  1.00  0.00
ATOM    224  CG  PRO    63      -7.355  -6.513  -9.794  1.00  0.00
ATOM    225  CD  PRO    63      -7.820  -7.790 -10.437  1.00  0.00
ATOM    226  O   PRO    63      -4.709  -6.870 -11.586  1.00  0.00
ATOM    227  C   PRO    63      -5.450  -6.272 -12.346  1.00  0.00
ATOM    228  N   GLU    64      -5.005  -5.560 -13.371  1.00  0.00
ATOM    229  CA  GLU    64      -3.600  -5.226 -13.516  1.00  0.00
ATOM    230  CB  GLU    64      -2.917  -6.192 -14.487  1.00  0.00
ATOM    231  CG  GLU    64      -2.919  -7.640 -14.025  1.00  0.00
ATOM    232  CD  GLU    64      -2.246  -8.569 -15.017  1.00  0.00
ATOM    233  OE1 GLU    64      -1.715  -8.070 -16.031  1.00  0.00
ATOM    234  OE2 GLU    64      -2.249  -9.795 -14.779  1.00  0.00
ATOM    235  O   GLU    64      -4.477  -3.193 -14.495  1.00  0.00
ATOM    236  C   GLU    64      -3.477  -3.795 -14.060  1.00  0.00
ATOM    237  N   LEU    65      -2.243  -3.289 -14.063  1.00  0.00
ATOM    238  CA  LEU    65      -1.920  -1.975 -14.594  1.00  0.00
ATOM    239  CB  LEU    65      -0.619  -1.453 -13.980  1.00  0.00
ATOM    240  CG  LEU    65      -0.628  -1.225 -12.467  1.00  0.00
ATOM    241  CD1 LEU    65       0.749  -0.800 -11.978  1.00  0.00
ATOM    242  CD2 LEU    65      -1.623  -0.136 -12.093  1.00  0.00
ATOM    243  O   LEU    65      -1.101  -2.870 -16.672  1.00  0.00
ATOM    244  C   LEU    65      -1.733  -1.977 -16.108  1.00  0.00
ATOM    245  N   THR    66      -2.281  -0.953 -16.739  1.00  0.00
ATOM    246  CA  THR    66      -1.979  -0.636 -18.107  1.00  0.00
ATOM    247  CB  THR    66      -3.009   0.343 -18.701  1.00  0.00
ATOM    248  CG2 THR    66      -4.412  -0.231 -18.596  1.00  0.00
ATOM    249  OG1 THR    66      -2.959   1.583 -17.983  1.00  0.00
ATOM    250  O   THR    66      -0.024   0.350 -17.076  1.00  0.00
ATOM    251  C   THR    66      -0.579   0.010 -18.143  1.00  0.00
ATOM    252  N   GLU    67       0.025   0.149 -19.345  1.00  0.00
ATOM    253  CA  GLU    67       1.250   0.991 -19.443  1.00  0.00
ATOM    254  CB  GLU    67       1.658   1.174 -20.907  1.00  0.00
ATOM    255  CG  GLU    67       2.935   1.976 -21.099  1.00  0.00
ATOM    256  CD  GLU    67       3.340   2.083 -22.557  1.00  0.00
ATOM    257  OE1 GLU    67       2.635   1.509 -23.414  1.00  0.00
ATOM    258  OE2 GLU    67       4.365   2.738 -22.841  1.00  0.00
ATOM    259  O   GLU    67       1.996   2.863 -18.159  1.00  0.00
ATOM    260  C   GLU    67       1.102   2.394 -18.862  1.00  0.00
ATOM    261  N   LYS    68      -0.013   3.068 -19.143  1.00  0.00
ATOM    262  CA  LYS    68      -0.304   4.363 -18.506  1.00  0.00
ATOM    263  CB  LYS    68      -1.647   4.910 -18.992  1.00  0.00
ATOM    264  CG  LYS    68      -1.643   5.371 -20.439  1.00  0.00
ATOM    265  CD  LYS    68      -3.005   5.903 -20.853  1.00  0.00
ATOM    266  CE  LYS    68      -3.009   6.342 -22.309  1.00  0.00
ATOM    267  NZ  LYS    68      -4.347   6.835 -22.738  1.00  0.00
ATOM    268  O   LYS    68       0.110   5.131 -16.227  1.00  0.00
ATOM    269  C   LYS    68      -0.374   4.252 -16.973  1.00  0.00
ATOM    270  N   GLY    69      -0.979   3.180 -16.496  1.00  0.00
ATOM    271  CA  GLY    69      -1.097   2.931 -15.067  1.00  0.00
ATOM    272  O   GLY    69       0.359   2.910 -13.197  1.00  0.00
ATOM    273  C   GLY    69       0.206   2.607 -14.372  1.00  0.00
ATOM    274  N   GLU    70       1.124   1.956 -15.082  1.00  0.00
ATOM    275  CA  GLU    70       2.511   1.725 -14.620  1.00  0.00
ATOM    276  CB  GLU    70       3.303   0.942 -15.669  1.00  0.00
ATOM    277  CG  GLU    70       2.880  -0.511 -15.808  1.00  0.00
ATOM    278  CD  GLU    70       3.598  -1.222 -16.938  1.00  0.00
ATOM    279  OE1 GLU    70       4.371  -0.558 -17.660  1.00  0.00
ATOM    280  OE2 GLU    70       3.386  -2.441 -17.103  1.00  0.00
ATOM    281  O   GLU    70       4.012   3.158 -13.378  1.00  0.00
ATOM    282  C   GLU    70       3.265   3.044 -14.360  1.00  0.00
ATOM    283  N   ASN    71       3.075   4.030 -15.236  1.00  0.00
ATOM    284  CA  ASN    71       3.726   5.335 -15.086  1.00  0.00
ATOM    285  CB  ASN    71       3.386   6.243 -16.270  1.00  0.00
ATOM    286  CG  ASN    71       4.074   5.812 -17.551  1.00  0.00
ATOM    287  ND2 ASN    71       3.584   6.307 -18.680  1.00  0.00
ATOM    288  OD1 ASN    71       5.034   5.041 -17.521  1.00  0.00
ATOM    289  O   ASN    71       4.136   6.419 -12.987  1.00  0.00
ATOM    290  C   ASN    71       3.300   6.070 -13.820  1.00  0.00
ATOM    291  N   TYR    72       1.996   6.272 -13.647  1.00  0.00
ATOM    292  CA  TYR    72       1.486   6.978 -12.470  1.00  0.00
ATOM    293  CB  TYR    72      -0.034   7.127 -12.551  1.00  0.00
ATOM    294  CG  TYR    72      -0.647   7.822 -11.357  1.00  0.00
ATOM    295  CD1 TYR    72      -0.584   9.203 -11.228  1.00  0.00
ATOM    296  CD2 TYR    72      -1.288   7.094 -10.362  1.00  0.00
ATOM    297  CE1 TYR    72      -1.141   9.846 -10.139  1.00  0.00
ATOM    298  CE2 TYR    72      -1.849   7.721  -9.266  1.00  0.00
ATOM    299  CZ  TYR    72      -1.772   9.108  -9.162  1.00  0.00
ATOM    300  OH  TYR    72      -2.327   9.746  -8.077  1.00  0.00
ATOM    301  O   TYR    72       2.073   6.857 -10.154  1.00  0.00
ATOM    302  C   TYR    72       1.808   6.237 -11.182  1.00  0.00
ATOM    303  N   LEU    73       1.773   4.910 -11.250  1.00  0.00
ATOM    304  CA  LEU    73       2.062   4.061 -10.114  1.00  0.00
ATOM    305  CB  LEU    73       1.857   2.588 -10.480  1.00  0.00
ATOM    306  CG  LEU    73       2.103   1.572  -9.365  1.00  0.00
ATOM    307  CD1 LEU    73       1.116   1.774  -8.224  1.00  0.00
ATOM    308  CD2 LEU    73       1.945   0.151  -9.886  1.00  0.00
ATOM    309  O   LEU    73       3.791   4.272  -8.437  1.00  0.00
ATOM    310  C   LEU    73       3.526   4.237  -9.642  1.00  0.00
ATOM    314  N   GLY    77       4.221   5.438  -5.910  1.00  0.00
ATOM    315  CA  GLY    77       5.145   4.619  -5.110  1.00  0.00
ATOM    316  O   GLY    77       6.889   5.035  -3.531  1.00  0.00
ATOM    317  C   GLY    77       6.437   5.281  -4.640  1.00  0.00
ATOM    318  N   THR    78       7.071   6.070  -5.487  1.00  0.00
ATOM    319  CA  THR    78       8.192   6.894  -5.040  1.00  0.00
ATOM    320  CB  THR    78       8.679   7.837  -6.156  1.00  0.00
ATOM    321  CG2 THR    78       9.831   8.698  -5.661  1.00  0.00
ATOM    322  OG1 THR    78       9.127   7.065  -7.277  1.00  0.00
ATOM    323  O   THR    78       8.483   7.806  -2.838  1.00  0.00
ATOM    324  C   THR    78       7.774   7.753  -3.840  1.00  0.00
ATOM    325  N   TRP    79       6.610   8.387  -3.931  1.00  0.00
ATOM    326  CA  TRP    79       6.090   9.234  -2.835  1.00  0.00
ATOM    327  CB  TRP    79       4.816   9.956  -3.274  1.00  0.00
ATOM    328  CG  TRP    79       4.230  10.840  -2.216  1.00  0.00
ATOM    329  CD1 TRP    79       4.577  12.132  -1.943  1.00  0.00
ATOM    330  CD2 TRP    79       3.196  10.497  -1.285  1.00  0.00
ATOM    331  CE2 TRP    79       2.966  11.629  -0.480  1.00  0.00
ATOM    332  CE3 TRP    79       2.441   9.343  -1.055  1.00  0.00
ATOM    333  NE1 TRP    79       3.823  12.615  -0.900  1.00  0.00
ATOM    334  CZ2 TRP    79       2.014  11.641   0.539  1.00  0.00
ATOM    335  CZ3 TRP    79       1.499   9.359  -0.044  1.00  0.00
ATOM    336  CH2 TRP    79       1.291  10.499   0.741  1.00  0.00
ATOM    337  O   TRP    79       6.126   8.853  -0.460  1.00  0.00
ATOM    338  C   TRP    79       5.740   8.449  -1.563  1.00  0.00
ATOM    339  N   SER    80       4.994   7.357  -1.722  1.00  0.00
ATOM    340  CA  SER    80       4.658   6.448  -0.619  1.00  0.00
ATOM    341  CB  SER    80       3.852   5.255  -1.135  1.00  0.00
ATOM    342  OG  SER    80       2.580   5.661  -1.606  1.00  0.00
ATOM    343  O   SER    80       6.024   5.921   1.321  1.00  0.00
ATOM    344  C   SER    80       5.921   5.893   0.085  1.00  0.00
ATOM    345  N   LYS    81       6.861   5.377  -0.714  1.00  0.00
ATOM    346  CA  LYS    81       8.164   4.987  -0.201  1.00  0.00
ATOM    347  CB  LYS    81       9.079   4.544  -1.344  1.00  0.00
ATOM    348  CG  LYS    81       8.685   3.218  -1.975  1.00  0.00
ATOM    349  CD  LYS    81       9.636   2.838  -3.098  1.00  0.00
ATOM    350  CE  LYS    81       9.228   1.525  -3.745  1.00  0.00
ATOM    351  NZ  LYS    81      10.131   1.156  -4.870  1.00  0.00
ATOM    352  O   LYS    81       9.481   5.825   1.580  1.00  0.00
ATOM    353  C   LYS    81       8.903   6.083   0.533  1.00  0.00
ATOM    354  N   ALA    82       8.916   7.292  -0.011  1.00  0.00
ATOM    355  CA  ALA    82       9.638   8.389   0.652  1.00  0.00
ATOM    356  CB  ALA    82       9.520   9.669  -0.162  1.00  0.00
ATOM    357  O   ALA    82       9.782   8.933   3.004  1.00  0.00
ATOM    358  C   ALA    82       9.058   8.637   2.035  1.00  0.00
ATOM    359  N   TYR    83       7.740   8.539   2.102  1.00  0.00
ATOM    360  CA  TYR    83       7.018   8.818   3.333  1.00  0.00
ATOM    361  CB  TYR    83       5.514   8.908   3.064  1.00  0.00
ATOM    362  CG  TYR    83       4.685   9.173   4.300  1.00  0.00
ATOM    363  CD1 TYR    83       4.594  10.450   4.836  1.00  0.00
ATOM    364  CD2 TYR    83       3.997   8.142   4.928  1.00  0.00
ATOM    365  CE1 TYR    83       3.839  10.701   5.966  1.00  0.00
ATOM    366  CE2 TYR    83       3.236   8.374   6.058  1.00  0.00
ATOM    367  CZ  TYR    83       3.162   9.668   6.575  1.00  0.00
ATOM    368  OH  TYR    83       2.410   9.915   7.700  1.00  0.00
ATOM    369  O   TYR    83       7.587   7.997   5.496  1.00  0.00
ATOM    370  C   TYR    83       7.261   7.702   4.362  1.00  0.00
ATOM    371  N   LYS    84       7.151   6.438   3.953  1.00  0.00
ATOM    372  CA  LYS    84       7.413   5.309   4.846  1.00  0.00
ATOM    373  CB  LYS    84       7.268   3.986   4.091  1.00  0.00
ATOM    374  CG  LYS    84       5.838   3.640   3.712  1.00  0.00
ATOM    375  CD  LYS    84       5.767   2.316   2.970  1.00  0.00
ATOM    376  CE  LYS    84       4.340   1.982   2.569  1.00  0.00
ATOM    377  NZ  LYS    84       4.260   0.702   1.812  1.00  0.00
ATOM    378  O   LYS    84       9.071   5.170   6.599  1.00  0.00
ATOM    379  C   LYS    84       8.846   5.383   5.423  1.00  0.00
ATOM    380  N   THR    85       9.794   5.771   4.582  1.00  0.00
ATOM    381  CA  THR    85      11.206   5.914   4.925  1.00  0.00
ATOM    382  CB  THR    85      12.079   6.074   3.668  1.00  0.00
ATOM    383  CG2 THR    85      13.541   6.251   4.052  1.00  0.00
ATOM    384  OG1 THR    85      11.955   4.908   2.844  1.00  0.00
ATOM    385  O   THR    85      12.460   7.037   6.634  1.00  0.00
ATOM    386  C   THR    85      11.551   7.121   5.811  1.00  0.00
ATOM    387  N   ILE    86      10.856   8.252   5.641  1.00  0.00
ATOM    388  CA  ILE    86      11.195   9.468   6.396  1.00  0.00
ATOM    389  CB  ILE    86      11.217  10.710   5.487  1.00  0.00
ATOM    390  CG1 ILE    86       9.835  10.944   4.872  1.00  0.00
ATOM    391  CG2 ILE    86      12.221  10.528   4.359  1.00  0.00
ATOM    392  CD1 ILE    86       9.702  12.272   4.158  1.00  0.00
ATOM    393  O   ILE    86      10.250  10.857   8.122  1.00  0.00
ATOM    394  C   ILE    86      10.214   9.774   7.519  1.00  0.00
ATOM    395  N   LYS    87       9.336   8.816   7.780  1.00  0.00
ATOM    396  CA  LYS    87       8.335   8.927   8.837  1.00  0.00
ATOM    397  CB  LYS    87       7.591   7.602   9.012  1.00  0.00
ATOM    398  CG  LYS    87       6.499   7.637  10.069  1.00  0.00
ATOM    399  CD  LYS    87       5.761   6.311  10.146  1.00  0.00
ATOM    400  CE  LYS    87       4.701   6.331  11.234  1.00  0.00
ATOM    401  NZ  LYS    87       3.956   5.043  11.308  1.00  0.00
ATOM    402  O   LYS    87       8.424  10.224  10.864  1.00  0.00
ATOM    403  C   LYS    87       8.915   9.292  10.223  1.00  0.00
ATOM    404  N   GLU    88       9.958   8.567  10.692  1.00  0.00
ATOM    405  CA  GLU    88      10.499   8.898  12.023  1.00  0.00
ATOM    406  CB  GLU    88      11.745   8.062  12.319  1.00  0.00
ATOM    407  CG  GLU    88      12.337   8.298  13.699  1.00  0.00
ATOM    408  CD  GLU    88      13.532   7.406  13.979  1.00  0.00
ATOM    409  OE1 GLU    88      13.882   6.589  13.103  1.00  0.00
ATOM    410  OE2 GLU    88      14.117   7.526  15.076  1.00  0.00
ATOM    411  O   GLU    88      10.703  10.909  13.301  1.00  0.00
ATOM    412  C   GLU    88      10.925  10.364  12.224  1.00  0.00
ATOM    413  N   ILE    89      11.531  10.984  11.215  1.00  0.00
ATOM    414  CA  ILE    89      11.873  12.398  11.288  1.00  0.00
ATOM    415  CB  ILE    89      12.722  12.837  10.082  1.00  0.00
ATOM    416  CG1 ILE    89      13.994  11.992   9.988  1.00  0.00
ATOM    417  CG2 ILE    89      13.125  14.299  10.217  1.00  0.00
ATOM    418  CD1 ILE    89      14.809  12.249   8.740  1.00  0.00
ATOM    419  O   ILE    89      10.592  14.304  12.002  1.00  0.00
ATOM    420  C   ILE    89      10.616  13.283  11.310  1.00  0.00
TER
END



