
PFRMAT TS
TARGET T0360
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0360 model 4 Thu Jul  6 14:22:28 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  4
PARENT N/A
ATOM      2  N   LYS    20       0.259   7.504  -8.869  1.00  0.00
ATOM      3  CA  LYS    20       1.166   8.098  -7.904  1.00  0.00
ATOM      4  CB  LYS    20       1.410   7.138  -6.737  1.00  0.00
ATOM      5  CG  LYS    20       0.185   6.892  -5.871  1.00  0.00
ATOM      6  CD  LYS    20       0.496   5.927  -4.738  1.00  0.00
ATOM      7  CE  LYS    20      -0.710   5.730  -3.835  1.00  0.00
ATOM      8  NZ  LYS    20      -0.424   4.783  -2.723  1.00  0.00
ATOM      9  O   LYS    20       2.822   7.829  -9.612  1.00  0.00
ATOM     10  C   LYS    20       2.495   8.404  -8.571  1.00  0.00
ATOM     11  N   LYS    21       3.248   9.318  -7.989  1.00  0.00
ATOM     12  CA  LYS    21       4.545   9.686  -8.523  1.00  0.00
ATOM     13  CB  LYS    21       4.962  11.068  -8.014  1.00  0.00
ATOM     14  CG  LYS    21       4.106  12.206  -8.543  1.00  0.00
ATOM     15  CD  LYS    21       4.586  13.549  -8.014  1.00  0.00
ATOM     16  CE  LYS    21       3.742  14.691  -8.556  1.00  0.00
ATOM     17  NZ  LYS    21       4.193  16.010  -8.035  1.00  0.00
ATOM     18  O   LYS    21       5.485   8.092  -7.009  1.00  0.00
ATOM     19  C   LYS    21       5.592   8.669  -8.089  1.00  0.00
ATOM     20  N   LYS    22       6.600   8.462  -8.925  1.00  0.00
ATOM     21  CA  LYS    22       7.664   7.503  -8.633  1.00  0.00
ATOM     22  CB  LYS    22       8.754   7.569  -9.705  1.00  0.00
ATOM     23  CG  LYS    22       9.889   6.580  -9.497  1.00  0.00
ATOM     24  CD  LYS    22      10.895   6.645 -10.636  1.00  0.00
ATOM     25  CE  LYS    22      12.046   5.679 -10.411  1.00  0.00
ATOM     26  NZ  LYS    22      13.037   5.729 -11.521  1.00  0.00
ATOM     27  O   LYS    22       8.667   6.876  -6.534  1.00  0.00
ATOM     28  C   LYS    22       8.315   7.792  -7.278  1.00  0.00
ATOM     29  N   GLN    23       8.465   9.072  -6.965  1.00  0.00
ATOM     30  CA  GLN    23       9.051   9.487  -5.700  1.00  0.00
ATOM     31  CB  GLN    23       9.193  11.010  -5.650  1.00  0.00
ATOM     32  CG  GLN    23      10.265  11.563  -6.574  1.00  0.00
ATOM     33  CD  GLN    23      10.288  13.078  -6.597  1.00  0.00
ATOM     34  OE1 GLN    23       9.447  13.732  -5.980  1.00  0.00
ATOM     35  NE2 GLN    23      11.253  13.645  -7.312  1.00  0.00
ATOM     36  O   GLN    23       8.669   8.505  -3.540  1.00  0.00
ATOM     37  C   GLN    23       8.176   9.050  -4.527  1.00  0.00
ATOM     38  N   THR    24       6.871   9.269  -4.658  1.00  0.00
ATOM     39  CA  THR    24       5.919   8.902  -3.615  1.00  0.00
ATOM     40  CB  THR    24       4.524   9.490  -3.892  1.00  0.00
ATOM     41  CG2 THR    24       3.544   9.069  -2.808  1.00  0.00
ATOM     42  OG1 THR    24       4.600  10.920  -3.919  1.00  0.00
ATOM     43  O   THR    24       5.597   6.836  -2.440  1.00  0.00
ATOM     44  C   THR    24       5.781   7.389  -3.527  1.00  0.00
ATOM     45  N   GLU    25       5.872   6.726  -4.678  1.00  0.00
ATOM     46  CA  GLU    25       5.776   5.270  -4.749  1.00  0.00
ATOM     47  CB  GLU    25       6.055   4.784  -6.172  1.00  0.00
ATOM     48  CG  GLU    25       5.918   3.282  -6.353  1.00  0.00
ATOM     49  CD  GLU    25       6.140   2.844  -7.787  1.00  0.00
ATOM     50  OE1 GLU    25       6.377   3.719  -8.645  1.00  0.00
ATOM     51  OE2 GLU    25       6.077   1.625  -8.053  1.00  0.00
ATOM     52  O   GLU    25       6.473   3.695  -3.074  1.00  0.00
ATOM     53  C   GLU    25       6.790   4.630  -3.811  1.00  0.00
ATOM     54  N   MET    26       8.002   5.169  -3.824  1.00  0.00
ATOM     55  CA  MET    26       9.078   4.668  -2.983  1.00  0.00
ATOM     56  CB  MET    26      10.411   5.307  -3.380  1.00  0.00
ATOM     57  CG  MET    26      10.932   4.861  -4.737  1.00  0.00
ATOM     58  SD  MET    26      11.236   3.084  -4.814  1.00  0.00
ATOM     59  CE  MET    26      12.634   2.929  -3.706  1.00  0.00
ATOM     60  O   MET    26       9.053   4.153  -0.644  1.00  0.00
ATOM     61  C   MET    26       8.817   4.988  -1.514  1.00  0.00
ATOM     62  N   ILE    27       8.324   6.197  -1.250  1.00  0.00
ATOM     63  CA  ILE    27       8.019   6.625   0.115  1.00  0.00
ATOM     64  CB  ILE    27       7.433   8.049   0.142  1.00  0.00
ATOM     65  CG1 ILE    27       8.490   9.070  -0.281  1.00  0.00
ATOM     66  CG2 ILE    27       6.954   8.402   1.542  1.00  0.00
ATOM     67  CD1 ILE    27       7.935  10.452  -0.543  1.00  0.00
ATOM     68  O   ILE    27       7.206   5.193   1.868  1.00  0.00
ATOM     69  C   ILE    27       7.000   5.686   0.758  1.00  0.00
ATOM     70  N   ALA    28       5.917   5.425   0.038  1.00  0.00
ATOM     71  CA  ALA    28       4.866   4.542   0.523  1.00  0.00
ATOM     72  CB  ALA    28       3.708   4.503  -0.463  1.00  0.00
ATOM     73  O   ALA    28       5.091   2.454   1.691  1.00  0.00
ATOM     74  C   ALA    28       5.395   3.124   0.702  1.00  0.00
ATOM     75  N   ASP    29       6.198   2.682  -0.256  1.00  0.00
ATOM     76  CA  ASP    29       6.770   1.342  -0.218  1.00  0.00
ATOM     77  CB  ASP    29       7.588   1.073  -1.482  1.00  0.00
ATOM     78  CG  ASP    29       6.720   0.870  -2.707  1.00  0.00
ATOM     79  OD1 ASP    29       5.492   0.702  -2.544  1.00  0.00
ATOM     80  OD2 ASP    29       7.266   0.878  -3.830  1.00  0.00
ATOM     81  O   ASP    29       7.649   0.136   1.647  1.00  0.00
ATOM     82  C   ASP    29       7.685   1.167   0.984  1.00  0.00
ATOM     83  N   HIS    30       8.487   2.184   1.273  1.00  0.00
ATOM     84  CA  HIS    30       9.414   2.142   2.399  1.00  0.00
ATOM     85  CB  HIS    30      10.213   3.445   2.485  1.00  0.00
ATOM     86  CG  HIS    30      11.191   3.480   3.617  1.00  0.00
ATOM     87  CD2 HIS    30      11.277   4.174   4.894  1.00  0.00
ATOM     88  ND1 HIS    30      12.352   2.738   3.622  1.00  0.00
ATOM     89  CE1 HIS    30      13.022   2.978   4.764  1.00  0.00
ATOM     90  NE2 HIS    30      12.382   3.839   5.532  1.00  0.00
ATOM     91  O   HIS    30       9.156   1.279   4.623  1.00  0.00
ATOM     92  C   HIS    30       8.670   1.957   3.720  1.00  0.00
ATOM     93  N   ILE    31       7.485   2.551   3.820  1.00  0.00
ATOM     94  CA  ILE    31       6.680   2.458   5.030  1.00  0.00
ATOM     95  CB  ILE    31       5.542   3.494   5.033  1.00  0.00
ATOM     96  CG1 ILE    31       6.109   4.911   5.138  1.00  0.00
ATOM     97  CG2 ILE    31       4.610   3.260   6.212  1.00  0.00
ATOM     98  CD1 ILE    31       5.088   5.998   4.884  1.00  0.00
ATOM     99  O   ILE    31       6.066   0.479   6.249  1.00  0.00
ATOM    100  C   ILE    31       6.041   1.077   5.175  1.00  0.00
ATOM    101  N   TYR    32       5.485   0.562   4.084  1.00  0.00
ATOM    102  CA  TYR    32       4.814  -0.734   4.116  1.00  0.00
ATOM    103  CB  TYR    32       3.871  -0.879   2.920  1.00  0.00
ATOM    104  CG  TYR    32       2.638  -0.007   3.003  1.00  0.00
ATOM    105  CD1 TYR    32       2.550   1.170   2.272  1.00  0.00
ATOM    106  CD2 TYR    32       1.567  -0.364   3.812  1.00  0.00
ATOM    107  CE1 TYR    32       1.428   1.974   2.341  1.00  0.00
ATOM    108  CE2 TYR    32       0.437   0.428   3.895  1.00  0.00
ATOM    109  CZ  TYR    32       0.376   1.604   3.149  1.00  0.00
ATOM    110  OH  TYR    32      -0.745   2.401   3.220  1.00  0.00
ATOM    111  O   TYR    32       5.443  -3.039   4.359  1.00  0.00
ATOM    112  C   TYR    32       5.804  -1.901   4.065  1.00  0.00
ATOM    113  N   GLY    33       7.041  -1.626   3.678  1.00  0.00
ATOM    114  CA  GLY    33       8.059  -2.666   3.607  1.00  0.00
ATOM    115  O   GLY    33      10.180  -3.031   4.686  1.00  0.00
ATOM    116  C   GLY    33       9.062  -2.510   4.741  1.00  0.00
ATOM    117  N   LYS    34       8.656  -1.785   5.772  1.00  0.00
ATOM    118  CA  LYS    34       9.506  -1.559   6.927  1.00  0.00
ATOM    119  CB  LYS    34       9.132  -0.246   7.619  1.00  0.00
ATOM    120  CG  LYS    34       9.912   0.029   8.894  1.00  0.00
ATOM    121  CD  LYS    34      11.326   0.493   8.585  1.00  0.00
ATOM    122  CE  LYS    34      12.028   0.995   9.837  1.00  0.00
ATOM    123  NZ  LYS    34      13.378   1.546   9.533  1.00  0.00
ATOM    124  O   LYS    34       8.218  -3.103   8.229  1.00  0.00
ATOM    125  C   LYS    34       9.339  -2.703   7.921  1.00  0.00
ATOM    126  N   TYR    35      10.452  -3.252   8.430  1.00  0.00
ATOM    127  CA  TYR    35      10.422  -4.359   9.382  1.00  0.00
ATOM    128  CB  TYR    35      11.739  -5.136   9.341  1.00  0.00
ATOM    129  CG  TYR    35      11.964  -5.893   8.052  1.00  0.00
ATOM    130  CD1 TYR    35      12.858  -5.424   7.099  1.00  0.00
ATOM    131  CD2 TYR    35      11.280  -7.074   7.791  1.00  0.00
ATOM    132  CE1 TYR    35      13.071  -6.108   5.917  1.00  0.00
ATOM    133  CE2 TYR    35      11.479  -7.772   6.616  1.00  0.00
ATOM    134  CZ  TYR    35      12.383  -7.279   5.676  1.00  0.00
ATOM    135  OH  TYR    35      12.592  -7.962   4.501  1.00  0.00
ATOM    136  O   TYR    35      10.492  -4.622  11.771  1.00  0.00
ATOM    137  C   TYR    35      10.217  -3.889  10.820  1.00  0.00
ATOM    138  N   ASP    36       9.736  -2.664  10.975  1.00  0.00
ATOM    139  CA  ASP    36       9.502  -2.098  12.293  1.00  0.00
ATOM    140  CB  ASP    36       9.960  -0.638  12.339  1.00  0.00
ATOM    141  CG  ASP    36       9.836  -0.032  13.723  1.00  0.00
ATOM    142  OD1 ASP    36       9.368  -0.737  14.641  1.00  0.00
ATOM    143  OD2 ASP    36      10.205   1.150  13.888  1.00  0.00
ATOM    144  O   ASP    36       7.173  -1.796  11.825  1.00  0.00
ATOM    145  C   ASP    36       8.022  -2.145  12.645  1.00  0.00
ATOM    146  N   VAL    37       7.694  -2.571  13.877  1.00  0.00
ATOM    147  CA  VAL    37       6.308  -2.663  14.342  1.00  0.00
ATOM    148  CB  VAL    37       6.222  -3.324  15.730  1.00  0.00
ATOM    149  CG1 VAL    37       6.808  -4.728  15.688  1.00  0.00
ATOM    150  CG2 VAL    37       6.995  -2.510  16.757  1.00  0.00
ATOM    151  O   VAL    37       4.434  -1.158  14.414  1.00  0.00
ATOM    152  C   VAL    37       5.658  -1.288  14.457  1.00  0.00
ATOM    153  N   PHE    38       6.493  -0.265  14.595  1.00  0.00
ATOM    154  CA  PHE    38       6.021   1.110  14.705  1.00  0.00
ATOM    155  CB  PHE    38       7.073   1.984  15.391  1.00  0.00
ATOM    156  CG  PHE    38       7.246   1.689  16.854  1.00  0.00
ATOM    157  CD1 PHE    38       8.292   0.897  17.295  1.00  0.00
ATOM    158  CD2 PHE    38       6.363   2.203  17.787  1.00  0.00
ATOM    159  CE1 PHE    38       8.451   0.626  18.642  1.00  0.00
ATOM    160  CE2 PHE    38       6.523   1.932  19.134  1.00  0.00
ATOM    161  CZ  PHE    38       7.562   1.146  19.561  1.00  0.00
ATOM    162  O   PHE    38       5.185   2.765  13.179  1.00  0.00
ATOM    163  C   PHE    38       5.744   1.676  13.319  1.00  0.00
ATOM    164  N   GLY    47       6.125   0.918  12.303  1.00  0.00
ATOM    165  CA  GLY    47       5.944   1.354  10.938  1.00  0.00
ATOM    166  O   GLY    47       8.243   1.679  10.389  1.00  0.00
ATOM    167  C   GLY    47       7.121   2.181  10.480  1.00  0.00
ATOM    168  N   ILE    48       6.878   3.451  10.215  1.00  0.00
ATOM    169  CA  ILE    48       7.926   4.355   9.783  1.00  0.00
ATOM    170  CB  ILE    48       8.114   4.313   8.255  1.00  0.00
ATOM    171  CG1 ILE    48       8.548   2.915   7.810  1.00  0.00
ATOM    172  CG2 ILE    48       9.178   5.309   7.822  1.00  0.00
ATOM    173  CD1 ILE    48       8.553   2.728   6.308  1.00  0.00
ATOM    174  O   ILE    48       6.651   6.378   9.628  1.00  0.00
ATOM    175  C   ILE    48       7.568   5.776  10.185  1.00  0.00
ATOM    176  N   ASP    49       8.030   9.907  10.824  1.00  0.00
ATOM    177  CA  ASP    49       8.398  11.004   9.936  1.00  0.00
ATOM    178  CB  ASP    49       7.689  12.294  10.356  1.00  0.00
ATOM    179  CG  ASP    49       6.208  12.277  10.032  1.00  0.00
ATOM    180  OD1 ASP    49       5.776  11.382   9.274  1.00  0.00
ATOM    181  OD2 ASP    49       5.480  13.161  10.532  1.00  0.00
ATOM    182  O   ASP    49      10.559  11.461   8.989  1.00  0.00
ATOM    183  C   ASP    49       9.901  11.219  10.002  1.00  0.00
ATOM    184  N   GLN    50      10.437  11.095  11.210  1.00  0.00
ATOM    185  CA  GLN    50      11.865  11.254  11.445  1.00  0.00
ATOM    186  CB  GLN    50      12.167  11.236  12.945  1.00  0.00
ATOM    187  CG  GLN    50      11.647  12.452  13.695  1.00  0.00
ATOM    188  CD  GLN    50      11.941  12.387  15.183  1.00  0.00
ATOM    189  OE1 GLN    50      12.567  11.441  15.660  1.00  0.00
ATOM    190  NE2 GLN    50      11.487  13.396  15.917  1.00  0.00
ATOM    191  O   GLN    50      13.850  10.246  10.537  1.00  0.00
ATOM    192  C   GLN    50      12.651  10.122  10.785  1.00  0.00
ATOM    193  N   ASP    51      11.964   9.022  10.501  1.00  0.00
ATOM    194  CA  ASP    51      12.589   7.865   9.874  1.00  0.00
ATOM    195  CB  ASP    51      11.856   6.581  10.267  1.00  0.00
ATOM    196  CG  ASP    51      11.958   6.283  11.750  1.00  0.00
ATOM    197  OD1 ASP    51      13.093   6.221  12.267  1.00  0.00
ATOM    198  OD2 ASP    51      10.903   6.112  12.395  1.00  0.00
ATOM    199  O   ASP    51      13.459   7.546   7.666  1.00  0.00
ATOM    200  C   ASP    51      12.550   7.997   8.361  1.00  0.00
ATOM    201  N   LEU    52      11.490   8.619   7.861  1.00  0.00
ATOM    202  CA  LEU    52      11.323   8.829   6.427  1.00  0.00
ATOM    203  CB  LEU    52      10.037   9.609   6.147  1.00  0.00
ATOM    204  CG  LEU    52       8.723   8.863   6.394  1.00  0.00
ATOM    205  CD1 LEU    52       7.537   9.805   6.260  1.00  0.00
ATOM    206  CD2 LEU    52       8.550   7.734   5.390  1.00  0.00
ATOM    207  O   LEU    52      13.098   9.217   4.861  1.00  0.00
ATOM    208  C   LEU    52      12.495   9.618   5.857  1.00  0.00
ATOM    209  N   ILE    53      12.821  10.727   6.509  1.00  0.00
ATOM    210  CA  ILE    53      13.930  11.575   6.075  1.00  0.00
ATOM    211  CB  ILE    53      13.910  12.940   6.788  1.00  0.00
ATOM    212  CG1 ILE    53      14.788  13.945   6.042  1.00  0.00
ATOM    213  CG2 ILE    53      14.432  12.806   8.211  1.00  0.00
ATOM    214  CD1 ILE    53      14.601  15.376   6.497  1.00  0.00
ATOM    215  O   ILE    53      16.287  11.226   5.771  1.00  0.00
ATOM    216  C   ILE    53      15.268  10.908   6.380  1.00  0.00
ATOM    217  N   ALA    54      15.253   9.976   7.328  1.00  0.00
ATOM    218  CA  ALA    54      16.459   9.255   7.710  1.00  0.00
ATOM    219  CB  ALA    54      16.232   8.493   9.007  1.00  0.00
ATOM    220  O   ALA    54      18.007   8.147   6.245  1.00  0.00
ATOM    221  C   ALA    54      16.837   8.264   6.618  1.00  0.00
ATOM    222  N   ALA    55      15.837   7.555   6.108  1.00  0.00
ATOM    223  CA  ALA    55      16.049   6.582   5.047  1.00  0.00
ATOM    224  CB  ALA    55      14.846   5.659   4.926  1.00  0.00
ATOM    225  O   ALA    55      17.218   7.035   2.997  1.00  0.00
ATOM    226  C   ALA    55      16.253   7.295   3.717  1.00  0.00
ATOM    227  N   LEU    56      15.348   8.211   3.413  1.00  0.00
ATOM    228  CA  LEU    56      15.410   8.975   2.182  1.00  0.00
ATOM    229  CB  LEU    56      14.018   9.095   1.554  1.00  0.00
ATOM    230  CG  LEU    56      13.320   7.781   1.199  1.00  0.00
ATOM    231  CD1 LEU    56      11.929   8.045   0.644  1.00  0.00
ATOM    232  CD2 LEU    56      14.113   7.017   0.149  1.00  0.00
ATOM    233  O   LEU    56      15.179  11.332   2.553  1.00  0.00
ATOM    234  C   LEU    56      15.940  10.372   2.475  1.00  0.00
ATOM    235  N   PRO    57      17.253  10.473   2.634  1.00  0.00
ATOM    236  CA  PRO    57      17.899  11.744   2.950  1.00  0.00
ATOM    237  CB  PRO    57      19.376  11.378   3.111  1.00  0.00
ATOM    238  CG  PRO    57      19.527  10.097   2.361  1.00  0.00
ATOM    239  CD  PRO    57      18.228   9.361   2.527  1.00  0.00
ATOM    240  O   PRO    57      17.729  13.978   2.083  1.00  0.00
ATOM    241  C   PRO    57      17.707  12.772   1.837  1.00  0.00
ATOM    242  N   GLN    58      17.513  12.295   0.614  1.00  0.00
ATOM    243  CA  GLN    58      17.306  13.182  -0.527  1.00  0.00
ATOM    244  CB  GLN    58      17.569  12.438  -1.838  1.00  0.00
ATOM    245  CG  GLN    58      19.011  11.997  -2.022  1.00  0.00
ATOM    246  CD  GLN    58      19.219  11.201  -3.295  1.00  0.00
ATOM    247  OE1 GLN    58      18.296  11.035  -4.093  1.00  0.00
ATOM    248  NE2 GLN    58      20.437  10.708  -3.492  1.00  0.00
ATOM    249  O   GLN    58      15.487  14.445  -1.454  1.00  0.00
ATOM    250  C   GLN    58      15.872  13.707  -0.553  1.00  0.00
ATOM    251  N   TYR    59      15.085  13.310   0.433  1.00  0.00
ATOM    252  CA  TYR    59      13.702  13.743   0.529  1.00  0.00
ATOM    253  CB  TYR    59      12.806  12.582   0.966  1.00  0.00
ATOM    254  CG  TYR    59      12.678  11.486  -0.068  1.00  0.00
ATOM    255  CD1 TYR    59      13.537  10.394  -0.057  1.00  0.00
ATOM    256  CD2 TYR    59      11.697  11.546  -1.049  1.00  0.00
ATOM    257  CE1 TYR    59      13.426   9.387  -0.997  1.00  0.00
ATOM    258  CE2 TYR    59      11.573  10.548  -1.999  1.00  0.00
ATOM    259  CZ  TYR    59      12.448   9.464  -1.966  1.00  0.00
ATOM    260  OH  TYR    59      12.336   8.462  -2.902  1.00  0.00
ATOM    261  O   TYR    59      13.819  14.667   2.738  1.00  0.00
ATOM    262  C   TYR    59      13.578  14.863   1.547  1.00  0.00
ATOM    263  N   ASP    60      13.228  16.040   1.069  1.00  0.00
ATOM    264  CA  ASP    60      13.067  17.197   1.926  1.00  0.00
ATOM    265  CB  ASP    60      12.957  18.473   1.090  1.00  0.00
ATOM    266  CG  ASP    60      14.279  18.879   0.470  1.00  0.00
ATOM    267  OD1 ASP    60      15.317  18.297   0.849  1.00  0.00
ATOM    268  OD2 ASP    60      14.278  19.781  -0.395  1.00  0.00
ATOM    269  O   ASP    60      10.835  16.417   2.371  1.00  0.00
ATOM    270  C   ASP    60      11.801  17.069   2.776  1.00  0.00
ATOM    271  N   ALA    61      11.819  17.684   3.953  1.00  0.00
ATOM    272  CA  ALA    61      10.677  17.648   4.863  1.00  0.00
ATOM    273  CB  ALA    61      10.939  18.530   6.075  1.00  0.00
ATOM    274  O   ALA    61       8.337  17.551   4.307  1.00  0.00
ATOM    275  C   ALA    61       9.408  18.149   4.173  1.00  0.00
ATOM    276  N   ALA    62       9.541  19.236   3.418  1.00  0.00
ATOM    277  CA  ALA    62       8.413  19.817   2.696  1.00  0.00
ATOM    278  CB  ALA    62       8.859  21.045   1.916  1.00  0.00
ATOM    279  O   ALA    62       6.600  18.700   1.573  1.00  0.00
ATOM    280  C   ALA    62       7.821  18.811   1.709  1.00  0.00
ATOM    281  N   LEU    63       8.695  18.072   1.036  1.00  0.00
ATOM    282  CA  LEU    63       8.278  17.076   0.061  1.00  0.00
ATOM    283  CB  LEU    63       9.483  16.566  -0.733  1.00  0.00
ATOM    284  CG  LEU    63      10.134  17.564  -1.693  1.00  0.00
ATOM    285  CD1 LEU    63      11.415  16.989  -2.277  1.00  0.00
ATOM    286  CD2 LEU    63       9.193  17.894  -2.843  1.00  0.00
ATOM    287  O   LEU    63       6.570  15.401   0.307  1.00  0.00
ATOM    288  C   LEU    63       7.618  15.878   0.746  1.00  0.00
ATOM    289  N   ILE    64       8.231  15.408   1.830  1.00  0.00
ATOM    290  CA  ILE    64       7.711  14.266   2.575  1.00  0.00
ATOM    291  CB  ILE    64       8.627  13.897   3.755  1.00  0.00
ATOM    292  CG1 ILE    64       9.962  13.352   3.244  1.00  0.00
ATOM    293  CG2 ILE    64       7.975  12.833   4.625  1.00  0.00
ATOM    294  CD1 ILE    64      11.018  13.213   4.321  1.00  0.00
ATOM    295  O   ILE    64       5.424  13.726   3.062  1.00  0.00
ATOM    296  C   ILE    64       6.324  14.563   3.142  1.00  0.00
ATOM    297  N   ALA    65       6.148  15.758   3.698  1.00  0.00
ATOM    298  CA  ALA    65       4.862  16.147   4.270  1.00  0.00
ATOM    299  CB  ALA    65       4.932  17.565   4.817  1.00  0.00
ATOM    300  O   ALA    65       2.662  15.609   3.477  1.00  0.00
ATOM    301  C   ALA    65       3.765  16.092   3.210  1.00  0.00
ATOM    302  N   ARG    66       4.080  16.569   2.008  1.00  0.00
ATOM    303  CA  ARG    66       3.121  16.562   0.906  1.00  0.00
ATOM    304  CB  ARG    66       3.707  17.268  -0.318  1.00  0.00
ATOM    305  CG  ARG    66       3.836  18.774  -0.163  1.00  0.00
ATOM    306  CD  ARG    66       4.491  19.401  -1.384  1.00  0.00
ATOM    307  NE  ARG    66       4.647  20.846  -1.240  1.00  0.00
ATOM    308  CZ  ARG    66       5.255  21.624  -2.130  1.00  0.00
ATOM    309  NH1 ARG    66       5.350  22.928  -1.914  1.00  0.00
ATOM    310  NH2 ARG    66       5.767  21.096  -3.233  1.00  0.00
ATOM    311  O   ARG    66       1.599  14.807   0.297  1.00  0.00
ATOM    312  C   ARG    66       2.769  15.134   0.516  1.00  0.00
ATOM    313  N   VAL    67       3.795  14.293   0.430  1.00  0.00
ATOM    314  CA  VAL    67       3.619  12.892   0.074  1.00  0.00
ATOM    315  CB  VAL    67       4.968  12.153   0.004  1.00  0.00
ATOM    316  CG1 VAL    67       4.749  10.658  -0.170  1.00  0.00
ATOM    317  CG2 VAL    67       5.791  12.658  -1.171  1.00  0.00
ATOM    318  O   VAL    67       1.834  11.451   0.760  1.00  0.00
ATOM    319  C   VAL    67       2.753  12.188   1.106  1.00  0.00
ATOM    320  N   LEU    68       3.041  12.441   2.377  1.00  0.00
ATOM    321  CA  LEU    68       2.284  11.850   3.472  1.00  0.00
ATOM    322  CB  LEU    68       2.809  12.349   4.820  1.00  0.00
ATOM    323  CG  LEU    68       2.093  11.821   6.064  1.00  0.00
ATOM    324  CD1 LEU    68       2.223  10.308   6.158  1.00  0.00
ATOM    325  CD2 LEU    68       2.688  12.428   7.324  1.00  0.00
ATOM    326  O   LEU    68      -0.068  11.364   3.485  1.00  0.00
ATOM    327  C   LEU    68       0.810  12.220   3.364  1.00  0.00
ATOM    328  N   ALA    69       0.549  13.496   3.112  1.00  0.00
ATOM    329  CA  ALA    69      -0.819  13.987   2.978  1.00  0.00
ATOM    330  CB  ALA    69      -0.822  15.485   2.715  1.00  0.00
ATOM    331  O   ALA    69      -2.684  12.883   1.934  1.00  0.00
ATOM    332  C   ALA    69      -1.525  13.291   1.818  1.00  0.00
ATOM    333  N   ASN    70      -0.811  13.135   0.710  1.00  0.00
ATOM    334  CA  ASN    70      -1.358  12.483  -0.470  1.00  0.00
ATOM    335  CB  ASN    70      -0.379  12.583  -1.642  1.00  0.00
ATOM    336  CG  ASN    70      -0.305  13.983  -2.220  1.00  0.00
ATOM    337  ND2 ASN    70       0.787  14.275  -2.918  1.00  0.00
ATOM    338  OD1 ASN    70      -1.217  14.788  -2.040  1.00  0.00
ATOM    339  O   ASN    70      -2.680  10.478  -0.519  1.00  0.00
ATOM    340  C   ASN    70      -1.622  11.008  -0.181  1.00  0.00
ATOM    341  N   HIS    71      -0.662  10.357   0.468  1.00  0.00
ATOM    342  CA  HIS    71      -0.787   8.945   0.815  1.00  0.00
ATOM    343  CB  HIS    71       0.505   8.434   1.454  1.00  0.00
ATOM    344  CG  HIS    71       0.519   6.956   1.690  1.00  0.00
ATOM    345  CD2 HIS    71       0.521   6.089   2.860  1.00  0.00
ATOM    346  ND1 HIS    71       0.536   6.039   0.660  1.00  0.00
ATOM    347  CE1 HIS    71       0.547   4.798   1.181  1.00  0.00
ATOM    348  NE2 HIS    71       0.538   4.822   2.499  1.00  0.00
ATOM    349  O   HIS    71      -2.525   7.651   1.863  1.00  0.00
ATOM    350  C   HIS    71      -1.930   8.731   1.806  1.00  0.00
ATOM    351  N   CYS    72      -2.221   9.760   2.594  1.00  0.00
ATOM    352  CA  CYS    72      -3.310   9.701   3.557  1.00  0.00
ATOM    353  CB  CYS    72      -3.200  10.850   4.561  1.00  0.00
ATOM    354  SG  CYS    72      -1.811  10.709   5.711  1.00  0.00
ATOM    355  O   CYS    72      -5.607   9.123   3.161  1.00  0.00
ATOM    356  C   CYS    72      -4.643   9.809   2.826  1.00  0.00
ATOM    357  N   ARG    73      -4.680  10.666   1.808  1.00  0.00
ATOM    358  CA  ARG    73      -5.882  10.851   0.999  1.00  0.00
ATOM    359  CB  ARG    73      -5.730  12.067   0.084  1.00  0.00
ATOM    360  CG  ARG    73      -5.542  13.383   0.824  1.00  0.00
ATOM    361  CD  ARG    73      -5.309  14.532  -0.142  1.00  0.00
ATOM    362  NE  ARG    73      -6.488  14.806  -0.961  1.00  0.00
ATOM    363  CZ  ARG    73      -7.479  15.614  -0.598  1.00  0.00
ATOM    364  NH1 ARG    73      -8.512  15.803  -1.407  1.00  0.00
ATOM    365  NH2 ARG    73      -7.433  16.233   0.575  1.00  0.00
ATOM    366  O   ARG    73      -7.235   9.273  -0.221  1.00  0.00
ATOM    367  C   ARG    73      -6.107   9.612   0.145  1.00  0.00
TER
END



