
PFRMAT TS
TARGET T0360
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0360 model 5 Thu Jul  6 14:22:28 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   THR    17       5.322  14.657  -8.534  1.00  0.00
ATOM      3  CA  THR    17       6.716  14.899  -8.875  1.00  0.00
ATOM      4  CB  THR    17       7.289  16.096  -8.096  1.00  0.00
ATOM      5  CG2 THR    17       8.737  16.349  -8.493  1.00  0.00
ATOM      6  OG1 THR    17       6.519  17.271  -8.383  1.00  0.00
ATOM      7  O   THR    17       7.247  12.990  -7.535  1.00  0.00
ATOM      8  C   THR    17       7.530  13.652  -8.530  1.00  0.00
ATOM      9  N   MET    18       8.550  13.343  -9.337  1.00  0.00
ATOM     10  CA  MET    18       9.386  12.147  -9.224  1.00  0.00
ATOM     11  CB  MET    18      10.658  12.303 -10.059  1.00  0.00
ATOM     12  CG  MET    18      11.514  11.048 -10.127  1.00  0.00
ATOM     13  SD  MET    18      10.688   9.687 -10.972  1.00  0.00
ATOM     14  CE  MET    18      10.812  10.221 -12.677  1.00  0.00
ATOM     15  O   MET    18       9.864  10.701  -7.358  1.00  0.00
ATOM     16  C   MET    18       9.826  11.857  -7.778  1.00  0.00
ATOM     17  N   SER    19      10.170  12.883  -6.998  1.00  0.00
ATOM     18  CA  SER    19      10.514  12.712  -5.588  1.00  0.00
ATOM     19  CB  SER    19      10.983  14.038  -4.986  1.00  0.00
ATOM     20  OG  SER    19      12.208  14.454  -5.561  1.00  0.00
ATOM     21  O   SER    19       9.443  11.309  -3.963  1.00  0.00
ATOM     22  C   SER    19       9.313  12.222  -4.773  1.00  0.00
ATOM     23  N   LYS    20       8.135  12.815  -4.975  1.00  0.00
ATOM     24  CA  LYS    20       6.935  12.422  -4.251  1.00  0.00
ATOM     25  CB  LYS    20       5.798  13.408  -4.522  1.00  0.00
ATOM     26  CG  LYS    20       5.999  14.776  -3.891  1.00  0.00
ATOM     27  CD  LYS    20       4.833  15.703  -4.196  1.00  0.00
ATOM     28  CE  LYS    20       5.051  17.080  -3.594  1.00  0.00
ATOM     29  NZ  LYS    20       3.926  18.007  -3.904  1.00  0.00
ATOM     30  O   LYS    20       6.144  10.197  -3.858  1.00  0.00
ATOM     31  C   LYS    20       6.491  11.025  -4.697  1.00  0.00
ATOM     32  N   LYS    21       6.553  10.749  -6.005  1.00  0.00
ATOM     33  CA  LYS    21       6.369   9.407  -6.554  1.00  0.00
ATOM     34  CB  LYS    21       6.732   9.382  -8.040  1.00  0.00
ATOM     35  CG  LYS    21       6.532   8.029  -8.705  1.00  0.00
ATOM     36  CD  LYS    21       6.850   8.092 -10.190  1.00  0.00
ATOM     37  CE  LYS    21       6.697   6.729 -10.845  1.00  0.00
ATOM     38  NZ  LYS    21       6.985   6.779 -12.305  1.00  0.00
ATOM     39  O   LYS    21       6.795   7.417  -5.300  1.00  0.00
ATOM     40  C   LYS    21       7.269   8.430  -5.804  1.00  0.00
ATOM     41  N   LYS    22       8.570   8.721  -5.740  1.00  0.00
ATOM     42  CA  LYS    22       9.545   7.916  -5.013  1.00  0.00
ATOM     43  CB  LYS    22      10.917   8.593  -5.029  1.00  0.00
ATOM     44  CG  LYS    22      12.010   7.797  -4.335  1.00  0.00
ATOM     45  CD  LYS    22      13.352   8.504  -4.432  1.00  0.00
ATOM     46  CE  LYS    22      14.438   7.723  -3.708  1.00  0.00
ATOM     47  NZ  LYS    22      15.766   8.391  -3.816  1.00  0.00
ATOM     48  O   LYS    22       9.033   6.580  -3.106  1.00  0.00
ATOM     49  C   LYS    22       9.136   7.719  -3.552  1.00  0.00
ATOM     50  N   GLN    23       8.895   8.797  -2.800  1.00  0.00
ATOM     51  CA  GLN    23       8.472   8.688  -1.403  1.00  0.00
ATOM     52  CB  GLN    23       8.083  10.061  -0.852  1.00  0.00
ATOM     53  CG  GLN    23       9.264  10.980  -0.584  1.00  0.00
ATOM     54  CD  GLN    23       8.837  12.375  -0.171  1.00  0.00
ATOM     55  OE1 GLN    23       8.372  12.585   0.950  1.00  0.00
ATOM     56  NE2 GLN    23       8.993  13.332  -1.077  1.00  0.00
ATOM     57  O   GLN    23       7.278   6.799  -0.506  1.00  0.00
ATOM     58  C   GLN    23       7.259   7.753  -1.284  1.00  0.00
ATOM     59  N   THR    24       6.214   8.014  -2.073  1.00  0.00
ATOM     60  CA  THR    24       5.018   7.182  -2.115  1.00  0.00
ATOM     61  CB  THR    24       4.055   7.635  -3.229  1.00  0.00
ATOM     62  CG2 THR    24       2.826   6.738  -3.266  1.00  0.00
ATOM     63  OG1 THR    24       3.638   8.984  -2.986  1.00  0.00
ATOM     64  O   THR    24       4.938   4.823  -1.666  1.00  0.00
ATOM     65  C   THR    24       5.386   5.719  -2.380  1.00  0.00
ATOM     66  N   GLU    25       6.214   5.479  -3.399  1.00  0.00
ATOM     67  CA  GLU    25       6.686   4.149  -3.760  1.00  0.00
ATOM     68  CB  GLU    25       7.700   4.234  -4.903  1.00  0.00
ATOM     69  CG  GLU    25       8.213   2.885  -5.378  1.00  0.00
ATOM     70  CD  GLU    25       9.188   3.005  -6.533  1.00  0.00
ATOM     71  OE1 GLU    25       9.452   4.145  -6.970  1.00  0.00
ATOM     72  OE2 GLU    25       9.689   1.961  -6.999  1.00  0.00
ATOM     73  O   GLU    25       7.022   2.346  -2.237  1.00  0.00
ATOM     74  C   GLU    25       7.361   3.477  -2.568  1.00  0.00
ATOM     75  N   MET    26       8.290   4.161  -1.897  1.00  0.00
ATOM     76  CA  MET    26       8.897   3.643  -0.678  1.00  0.00
ATOM     77  CB  MET    26       9.831   4.685  -0.060  1.00  0.00
ATOM     78  CG  MET    26      10.577   4.198   1.172  1.00  0.00
ATOM     79  SD  MET    26      11.741   2.872   0.802  1.00  0.00
ATOM     80  CE  MET    26      13.096   3.801   0.090  1.00  0.00
ATOM     81  O   MET    26       7.781   2.156   0.826  1.00  0.00
ATOM     82  C   MET    26       7.816   3.289   0.347  1.00  0.00
ATOM     83  N   ILE    27       6.929   4.236   0.673  1.00  0.00
ATOM     84  CA  ILE    27       5.872   4.013   1.660  1.00  0.00
ATOM     85  CB  ILE    27       4.904   5.208   1.732  1.00  0.00
ATOM     86  CG1 ILE    27       5.611   6.436   2.310  1.00  0.00
ATOM     87  CG2 ILE    27       3.712   4.876   2.617  1.00  0.00
ATOM     88  CD1 ILE    27       4.825   7.720   2.164  1.00  0.00
ATOM     89  O   ILE    27       4.759   1.956   2.189  1.00  0.00
ATOM     90  C   ILE    27       5.047   2.767   1.313  1.00  0.00
ATOM     91  N   ALA    28       4.636   2.627   0.050  1.00  0.00
ATOM     92  CA  ALA    28       3.766   1.536  -0.369  1.00  0.00
ATOM     93  CB  ALA    28       3.190   1.817  -1.749  1.00  0.00
ATOM     94  O   ALA    28       3.973  -0.835  -0.088  1.00  0.00
ATOM     95  C   ALA    28       4.522   0.207  -0.439  1.00  0.00
ATOM     96  N   ASP    29       5.765   0.228  -0.929  1.00  0.00
ATOM     97  CA  ASP    29       6.518  -0.974  -1.252  1.00  0.00
ATOM     98  CB  ASP    29       7.565  -0.678  -2.328  1.00  0.00
ATOM     99  CG  ASP    29       6.944  -0.412  -3.686  1.00  0.00
ATOM    100  OD1 ASP    29       5.750  -0.731  -3.867  1.00  0.00
ATOM    101  OD2 ASP    29       7.652   0.117  -4.569  1.00  0.00
ATOM    102  O   ASP    29       7.445  -2.762   0.023  1.00  0.00
ATOM    103  C   ASP    29       7.258  -1.550  -0.047  1.00  0.00
ATOM    104  N   HIS    30       7.750  -0.699   0.862  1.00  0.00
ATOM    105  CA  HIS    30       8.646  -1.140   1.927  1.00  0.00
ATOM    106  CB  HIS    30       8.961   0.017   2.875  1.00  0.00
ATOM    107  CG  HIS    30       9.959  -0.325   3.937  1.00  0.00
ATOM    108  CD2 HIS    30      10.788  -1.482   4.248  1.00  0.00
ATOM    109  ND1 HIS    30      10.303   0.547   4.946  1.00  0.00
ATOM    110  CE1 HIS    30      11.217  -0.038   5.739  1.00  0.00
ATOM    111  NE2 HIS    30      11.513  -1.256   5.327  1.00  0.00
ATOM    112  O   HIS    30       6.976  -2.065   3.373  1.00  0.00
ATOM    113  C   HIS    30       8.024  -2.276   2.759  1.00  0.00
ATOM    114  N   ILE    31       8.617  -3.483   2.784  1.00  0.00
ATOM    115  CA  ILE    31       8.002  -4.653   3.394  1.00  0.00
ATOM    116  CB  ILE    31       8.646  -5.957   2.890  1.00  0.00
ATOM    117  CG1 ILE    31       8.648  -5.994   1.360  1.00  0.00
ATOM    118  CG2 ILE    31       7.874  -7.165   3.401  1.00  0.00
ATOM    119  CD1 ILE    31       9.408  -7.167   0.779  1.00  0.00
ATOM    120  O   ILE    31       8.848  -5.447   5.505  1.00  0.00
ATOM    121  C   ILE    31       8.151  -4.620   4.920  1.00  0.00
ATOM    122  N   TYR    32       7.477  -3.669   5.568  1.00  0.00
ATOM    123  CA  TYR    32       7.387  -3.546   7.016  1.00  0.00
ATOM    124  CB  TYR    32       8.063  -2.258   7.488  1.00  0.00
ATOM    125  CG  TYR    32       9.557  -2.228   7.255  1.00  0.00
ATOM    126  CD1 TYR    32      10.083  -1.707   6.079  1.00  0.00
ATOM    127  CD2 TYR    32      10.436  -2.722   8.210  1.00  0.00
ATOM    128  CE1 TYR    32      11.446  -1.676   5.857  1.00  0.00
ATOM    129  CE2 TYR    32      11.803  -2.700   8.005  1.00  0.00
ATOM    130  CZ  TYR    32      12.304  -2.171   6.816  1.00  0.00
ATOM    131  OH  TYR    32      13.662  -2.141   6.598  1.00  0.00
ATOM    132  O   TYR    32       5.161  -2.738   6.791  1.00  0.00
ATOM    133  C   TYR    32       5.901  -3.522   7.385  1.00  0.00
ATOM    134  N   GLY    33       5.438  -4.332   8.354  1.00  0.00
ATOM    135  CA  GLY    33       4.086  -4.217   8.884  1.00  0.00
ATOM    136  O   GLY    33       2.740  -2.226   8.941  1.00  0.00
ATOM    137  C   GLY    33       3.782  -2.773   9.298  1.00  0.00
ATOM    138  N   LYS    34       4.729  -2.140  10.002  1.00  0.00
ATOM    139  CA  LYS    34       4.643  -0.759  10.463  1.00  0.00
ATOM    140  CB  LYS    34       5.727  -0.474  11.503  1.00  0.00
ATOM    141  CG  LYS    34       5.544  -1.223  12.813  1.00  0.00
ATOM    142  CD  LYS    34       6.641  -0.875  13.806  1.00  0.00
ATOM    143  CE  LYS    34       6.471  -1.642  15.108  1.00  0.00
ATOM    144  NZ  LYS    34       7.553  -1.330  16.082  1.00  0.00
ATOM    145  O   LYS    34       5.496   1.269   9.495  1.00  0.00
ATOM    146  C   LYS    34       4.823   0.252   9.320  1.00  0.00
ATOM    147  N   TYR    35       4.195   0.017   8.166  1.00  0.00
ATOM    148  CA  TYR    35       4.186   0.966   7.064  1.00  0.00
ATOM    149  CB  TYR    35       3.320   2.180   7.409  1.00  0.00
ATOM    150  CG  TYR    35       1.868   1.843   7.663  1.00  0.00
ATOM    151  CD1 TYR    35       1.358   1.825   8.955  1.00  0.00
ATOM    152  CD2 TYR    35       1.011   1.545   6.611  1.00  0.00
ATOM    153  CE1 TYR    35       0.032   1.518   9.198  1.00  0.00
ATOM    154  CE2 TYR    35      -0.317   1.237   6.834  1.00  0.00
ATOM    155  CZ  TYR    35      -0.803   1.226   8.141  1.00  0.00
ATOM    156  OH  TYR    35      -2.123   0.920   8.380  1.00  0.00
ATOM    157  O   TYR    35       6.516   0.685   6.563  1.00  0.00
ATOM    158  C   TYR    35       5.586   1.469   6.744  1.00  0.00
ATOM    159  N   ASP    36       5.743   2.791   6.729  1.00  0.00
ATOM    160  CA  ASP    36       7.052   3.409   6.674  1.00  0.00
ATOM    161  CB  ASP    36       7.411   3.779   5.235  1.00  0.00
ATOM    162  CG  ASP    36       8.859   4.200   5.085  1.00  0.00
ATOM    163  OD1 ASP    36       9.651   3.950   6.019  1.00  0.00
ATOM    164  OD2 ASP    36       9.204   4.782   4.035  1.00  0.00
ATOM    165  O   ASP    36       6.532   5.712   7.090  1.00  0.00
ATOM    166  C   ASP    36       6.982   4.658   7.539  1.00  0.00
ATOM    170  N   ASP    49       7.766   8.036   9.429  1.00  0.00
ATOM    171  CA  ASP    49       8.519   9.230   9.048  1.00  0.00
ATOM    172  CB  ASP    49       8.029  10.448   9.832  1.00  0.00
ATOM    173  CG  ASP    49       6.666  10.926   9.375  1.00  0.00
ATOM    174  OD1 ASP    49       6.207  10.476   8.304  1.00  0.00
ATOM    175  OD2 ASP    49       6.056  11.752  10.085  1.00  0.00
ATOM    176  O   ASP    49      10.860   9.342   8.487  1.00  0.00
ATOM    177  C   ASP    49      10.018   9.048   9.332  1.00  0.00
ATOM    178  N   GLN    50      10.376   8.540  10.514  1.00  0.00
ATOM    179  CA  GLN    50      11.781   8.371  10.857  1.00  0.00
ATOM    180  CB  GLN    50      11.927   7.913  12.309  1.00  0.00
ATOM    181  CG  GLN    50      11.565   8.976  13.335  1.00  0.00
ATOM    182  CD  GLN    50      11.615   8.455  14.757  1.00  0.00
ATOM    183  OE1 GLN    50      11.824   7.262  14.985  1.00  0.00
ATOM    184  NE2 GLN    50      11.421   9.347  15.721  1.00  0.00
ATOM    185  O   GLN    50      13.606   7.517   9.547  1.00  0.00
ATOM    186  C   GLN    50      12.466   7.321   9.964  1.00  0.00
ATOM    187  N   ASP    51      11.787   6.214   9.646  1.00  0.00
ATOM    188  CA  ASP    51      12.333   5.196   8.751  1.00  0.00
ATOM    189  CB  ASP    51      11.394   3.991   8.674  1.00  0.00
ATOM    190  CG  ASP    51      11.401   3.164   9.946  1.00  0.00
ATOM    191  OD1 ASP    51      12.302   3.374  10.785  1.00  0.00
ATOM    192  OD2 ASP    51      10.506   2.307  10.103  1.00  0.00
ATOM    193  O   ASP    51      13.548   5.720   6.746  1.00  0.00
ATOM    194  C   ASP    51      12.490   5.807   7.362  1.00  0.00
ATOM    195  N   LEU    52      11.419   6.450   6.898  1.00  0.00
ATOM    196  CA  LEU    52      11.340   7.186   5.651  1.00  0.00
ATOM    197  CB  LEU    52      10.079   8.052   5.619  1.00  0.00
ATOM    198  CG  LEU    52       9.883   8.919   4.374  1.00  0.00
ATOM    199  CD1 LEU    52       9.730   8.052   3.133  1.00  0.00
ATOM    200  CD2 LEU    52       8.636   9.780   4.509  1.00  0.00
ATOM    201  O   LEU    52      13.324   7.950   4.546  1.00  0.00
ATOM    202  C   LEU    52      12.566   8.095   5.504  1.00  0.00
ATOM    203  N   ILE    53      12.787   9.008   6.456  1.00  0.00
ATOM    204  CA  ILE    53      13.905   9.937   6.376  1.00  0.00
ATOM    205  CB  ILE    53      13.862  10.971   7.516  1.00  0.00
ATOM    206  CG1 ILE    53      12.661  11.902   7.348  1.00  0.00
ATOM    207  CG2 ILE    53      15.129  11.814   7.520  1.00  0.00
ATOM    208  CD1 ILE    53      12.391  12.774   8.554  1.00  0.00
ATOM    209  O   ILE    53      16.181   9.539   5.751  1.00  0.00
ATOM    210  C   ILE    53      15.245   9.199   6.469  1.00  0.00
ATOM    211  N   ALA    54      15.351   8.178   7.331  1.00  0.00
ATOM    212  CA  ALA    54      16.573   7.379   7.413  1.00  0.00
ATOM    213  CB  ALA    54      16.409   6.263   8.433  1.00  0.00
ATOM    214  O   ALA    54      18.078   6.707   5.692  1.00  0.00
ATOM    215  C   ALA    54      16.910   6.745   6.066  1.00  0.00
ATOM    216  N   ALA    55      15.912   6.246   5.332  1.00  0.00
ATOM    217  CA  ALA    55      16.146   5.753   3.983  1.00  0.00
ATOM    218  CB  ALA    55      14.890   5.093   3.433  1.00  0.00
ATOM    219  O   ALA    55      17.642   7.000   2.557  1.00  0.00
ATOM    220  C   ALA    55      16.532   6.931   3.084  1.00  0.00
ATOM    221  N   LEU    56      15.613   7.879   2.909  1.00  0.00
ATOM    222  CA  LEU    56      15.776   8.969   1.963  1.00  0.00
ATOM    223  CB  LEU    56      14.415   9.444   1.451  1.00  0.00
ATOM    224  CG  LEU    56      13.544   8.392   0.764  1.00  0.00
ATOM    225  CD1 LEU    56      12.210   8.988   0.343  1.00  0.00
ATOM    226  CD2 LEU    56      14.236   7.852  -0.480  1.00  0.00
ATOM    227  O   LEU    56      15.934  11.226   2.764  1.00  0.00
ATOM    228  C   LEU    56      16.484  10.135   2.654  1.00  0.00
ATOM    229  N   PRO    57      17.732   9.905   3.079  1.00  0.00
ATOM    230  CA  PRO    57      18.531  10.869   3.837  1.00  0.00
ATOM    231  CB  PRO    57      19.926  10.242   3.878  1.00  0.00
ATOM    232  CG  PRO    57      19.678   8.773   3.791  1.00  0.00
ATOM    233  CD  PRO    57      18.532   8.599   2.834  1.00  0.00
ATOM    234  O   PRO    57      18.621  13.271   3.869  1.00  0.00
ATOM    235  C   PRO    57      18.582  12.255   3.182  1.00  0.00
ATOM    236  N   GLN    58      18.589  12.292   1.849  1.00  0.00
ATOM    237  CA  GLN    58      18.659  13.527   1.081  1.00  0.00
ATOM    238  CB  GLN    58      18.857  13.225  -0.405  1.00  0.00
ATOM    239  CG  GLN    58      20.227  12.659  -0.745  1.00  0.00
ATOM    240  CD  GLN    58      20.365  12.313  -2.215  1.00  0.00
ATOM    241  OE1 GLN    58      19.419  12.456  -2.988  1.00  0.00
ATOM    242  NE2 GLN    58      21.550  11.855  -2.604  1.00  0.00
ATOM    243  O   GLN    58      17.405  15.573   1.020  1.00  0.00
ATOM    244  C   GLN    58      17.379  14.362   1.220  1.00  0.00
ATOM    245  N   TYR    59      16.249  13.717   1.517  1.00  0.00
ATOM    246  CA  TYR    59      14.938  14.333   1.471  1.00  0.00
ATOM    247  CB  TYR    59      13.865  13.290   1.157  1.00  0.00
ATOM    248  CG  TYR    59      13.916  12.767  -0.260  1.00  0.00
ATOM    249  CD1 TYR    59      14.699  13.393  -1.222  1.00  0.00
ATOM    250  CD2 TYR    59      13.179  11.649  -0.634  1.00  0.00
ATOM    251  CE1 TYR    59      14.751  12.921  -2.520  1.00  0.00
ATOM    252  CE2 TYR    59      13.219  11.165  -1.927  1.00  0.00
ATOM    253  CZ  TYR    59      14.015  11.811  -2.872  1.00  0.00
ATOM    254  OH  TYR    59      14.064  11.341  -4.164  1.00  0.00
ATOM    255  O   TYR    59      14.228  14.294   3.778  1.00  0.00
ATOM    256  C   TYR    59      14.667  14.960   2.843  1.00  0.00
ATOM    257  N   ASP    60      14.990  16.249   2.970  1.00  0.00
ATOM    258  CA  ASP    60      14.921  16.997   4.214  1.00  0.00
ATOM    259  CB  ASP    60      15.183  18.482   3.961  1.00  0.00
ATOM    260  CG  ASP    60      16.629  18.768   3.607  1.00  0.00
ATOM    261  OD1 ASP    60      17.467  17.850   3.743  1.00  0.00
ATOM    262  OD2 ASP    60      16.926  19.907   3.192  1.00  0.00
ATOM    263  O   ASP    60      12.524  16.784   4.230  1.00  0.00
ATOM    264  C   ASP    60      13.553  16.886   4.899  1.00  0.00
ATOM    265  N   ALA    61      13.539  16.933   6.236  1.00  0.00
ATOM    266  CA  ALA    61      12.345  16.706   7.047  1.00  0.00
ATOM    267  CB  ALA    61      12.619  17.054   8.503  1.00  0.00
ATOM    268  O   ALA    61      10.091  17.058   6.317  1.00  0.00
ATOM    269  C   ALA    61      11.180  17.573   6.558  1.00  0.00
ATOM    270  N   ALA    62      11.403  18.880   6.396  1.00  0.00
ATOM    271  CA  ALA    62      10.406  19.813   5.892  1.00  0.00
ATOM    272  CB  ALA    62      11.023  21.189   5.691  1.00  0.00
ATOM    273  O   ALA    62       8.630  19.236   4.373  1.00  0.00
ATOM    274  C   ALA    62       9.841  19.340   4.549  1.00  0.00
ATOM    275  N   LEU    63      10.728  19.022   3.611  1.00  0.00
ATOM    276  CA  LEU    63      10.369  18.532   2.295  1.00  0.00
ATOM    277  CB  LEU    63      11.625  18.209   1.483  1.00  0.00
ATOM    278  CG  LEU    63      12.475  19.401   1.044  1.00  0.00
ATOM    279  CD1 LEU    63      13.776  18.932   0.409  1.00  0.00
ATOM    280  CD2 LEU    63      11.729  20.247   0.024  1.00  0.00
ATOM    281  O   LEU    63       8.505  17.136   1.722  1.00  0.00
ATOM    282  C   LEU    63       9.523  17.258   2.401  1.00  0.00
ATOM    283  N   ILE    64       9.904  16.328   3.280  1.00  0.00
ATOM    284  CA  ILE    64       9.075  15.161   3.554  1.00  0.00
ATOM    285  CB  ILE    64       9.766  14.197   4.535  1.00  0.00
ATOM    286  CG1 ILE    64      10.994  13.559   3.880  1.00  0.00
ATOM    287  CG2 ILE    64       8.813  13.088   4.952  1.00  0.00
ATOM    288  CD1 ILE    64      11.881  12.807   4.846  1.00  0.00
ATOM    289  O   ILE    64       6.726  15.000   3.800  1.00  0.00
ATOM    290  C   ILE    64       7.740  15.570   4.172  1.00  0.00
ATOM    291  N   ALA    65       7.690  16.536   5.091  1.00  0.00
ATOM    292  CA  ALA    65       6.423  16.964   5.679  1.00  0.00
ATOM    293  CB  ALA    65       6.658  18.068   6.698  1.00  0.00
ATOM    294  O   ALA    65       4.305  17.159   4.530  1.00  0.00
ATOM    295  C   ALA    65       5.487  17.494   4.584  1.00  0.00
ATOM    296  N   ARG    66       6.035  18.318   3.692  1.00  0.00
ATOM    297  CA  ARG    66       5.336  18.827   2.520  1.00  0.00
ATOM    298  CB  ARG    66       6.267  19.702   1.678  1.00  0.00
ATOM    299  CG  ARG    66       6.610  21.037   2.319  1.00  0.00
ATOM    300  CD  ARG    66       7.572  21.834   1.453  1.00  0.00
ATOM    301  NE  ARG    66       7.951  23.099   2.077  1.00  0.00
ATOM    302  CZ  ARG    66       8.822  23.958   1.556  1.00  0.00
ATOM    303  NH1 ARG    66       9.105  25.085   2.196  1.00  0.00
ATOM    304  NH2 ARG    66       9.407  23.687   0.398  1.00  0.00
ATOM    305  O   ARG    66       3.669  17.592   1.300  1.00  0.00
ATOM    306  C   ARG    66       4.846  17.655   1.658  1.00  0.00
ATOM    307  N   VAL    67       5.739  16.710   1.343  1.00  0.00
ATOM    308  CA  VAL    67       5.387  15.528   0.566  1.00  0.00
ATOM    309  CB  VAL    67       6.585  14.572   0.418  1.00  0.00
ATOM    310  CG1 VAL    67       6.146  13.262  -0.219  1.00  0.00
ATOM    311  CG2 VAL    67       7.659  15.196  -0.458  1.00  0.00
ATOM    312  O   VAL    67       3.288  14.374   0.574  1.00  0.00
ATOM    313  C   VAL    67       4.253  14.746   1.231  1.00  0.00
ATOM    314  N   LEU    68       4.362  14.512   2.539  1.00  0.00
ATOM    315  CA  LEU    68       3.368  13.840   3.355  1.00  0.00
ATOM    316  CB  LEU    68       3.788  13.849   4.826  1.00  0.00
ATOM    317  CG  LEU    68       2.823  13.186   5.811  1.00  0.00
ATOM    318  CD1 LEU    68       2.654  11.710   5.486  1.00  0.00
ATOM    319  CD2 LEU    68       3.343  13.303   7.235  1.00  0.00
ATOM    320  O   LEU    68       1.026  13.943   2.886  1.00  0.00
ATOM    321  C   LEU    68       2.035  14.568   3.207  1.00  0.00
ATOM    322  N   ALA    69       2.027  15.886   3.435  1.00  0.00
ATOM    323  CA  ALA    69       0.825  16.690   3.276  1.00  0.00
ATOM    324  CB  ALA    69       1.148  18.166   3.445  1.00  0.00
ATOM    325  O   ALA    69      -0.948  16.125   1.773  1.00  0.00
ATOM    326  C   ALA    69       0.227  16.475   1.887  1.00  0.00
ATOM    327  N   ASN    70       1.027  16.672   0.838  1.00  0.00
ATOM    328  CA  ASN    70       0.564  16.509  -0.533  1.00  0.00
ATOM    329  CB  ASN    70       1.725  16.677  -1.514  1.00  0.00
ATOM    330  CG  ASN    70       1.290  16.548  -2.960  1.00  0.00
ATOM    331  ND2 ASN    70       1.764  15.503  -3.628  1.00  0.00
ATOM    332  OD1 ASN    70       0.537  17.380  -3.469  1.00  0.00
ATOM    333  O   ASN    70      -1.221  14.999  -1.065  1.00  0.00
ATOM    334  C   ASN    70      -0.043  15.119  -0.745  1.00  0.00
ATOM    335  N   HIS    71       0.743  14.064  -0.541  1.00  0.00
ATOM    336  CA  HIS    71       0.314  12.686  -0.736  1.00  0.00
ATOM    337  CB  HIS    71       1.425  11.716  -0.331  1.00  0.00
ATOM    338  CG  HIS    71       1.063  10.274  -0.504  1.00  0.00
ATOM    339  CD2 HIS    71       0.745   9.168   0.389  1.00  0.00
ATOM    340  ND1 HIS    71       0.957   9.676  -1.742  1.00  0.00
ATOM    341  CE1 HIS    71       0.620   8.384  -1.576  1.00  0.00
ATOM    342  NE2 HIS    71       0.491   8.073  -0.301  1.00  0.00
ATOM    343  O   HIS    71      -1.788  11.604  -0.346  1.00  0.00
ATOM    344  C   HIS    71      -0.924  12.357   0.105  1.00  0.00
ATOM    345  N   CYS    72      -1.028  12.916   1.312  1.00  0.00
ATOM    346  CA  CYS    72      -2.231  12.792   2.123  1.00  0.00
ATOM    347  CB  CYS    72      -2.032  13.461   3.484  1.00  0.00
ATOM    348  SG  CYS    72      -3.441  13.306   4.606  1.00  0.00
ATOM    349  O   CYS    72      -4.462  12.852   1.248  1.00  0.00
ATOM    350  C   CYS    72      -3.407  13.465   1.406  1.00  0.00
ATOM    351  N   ARG    73      -3.244  14.711   0.951  1.00  0.00
ATOM    352  CA  ARG    73      -4.297  15.449   0.249  1.00  0.00
ATOM    353  CB  ARG    73      -3.802  16.841  -0.148  1.00  0.00
ATOM    354  CG  ARG    73      -3.548  17.768   1.031  1.00  0.00
ATOM    355  CD  ARG    73      -3.034  19.121   0.568  1.00  0.00
ATOM    356  NE  ARG    73      -2.759  20.015   1.690  1.00  0.00
ATOM    357  CZ  ARG    73      -2.242  21.234   1.566  1.00  0.00
ATOM    358  NH1 ARG    73      -2.025  21.975   2.643  1.00  0.00
ATOM    359  NH2 ARG    73      -1.942  21.707   0.364  1.00  0.00
ATOM    360  O   ARG    73      -5.916  14.702  -1.352  1.00  0.00
ATOM    361  C   ARG    73      -4.730  14.721  -1.026  1.00  0.00
TER
END



