
PFRMAT TS
TARGET T0383
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0383 model 3 Mon Jul 17 15:01:51 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  3
PARENT N/A
ATOM      2  N   VAL    76      -2.231   5.262   8.834  1.00  0.00
ATOM      3  CA  VAL    76      -2.449   6.658   8.456  1.00  0.00
ATOM      4  CB  VAL    76      -3.124   7.451   9.590  1.00  0.00
ATOM      5  CG1 VAL    76      -3.186   8.932   9.241  1.00  0.00
ATOM      6  CG2 VAL    76      -4.543   6.952   9.817  1.00  0.00
ATOM      7  O   VAL    76      -0.116   7.137   8.790  1.00  0.00
ATOM      8  C   VAL    76      -1.131   7.352   8.132  1.00  0.00
ATOM      9  N   ASN    77      -1.156   8.174   7.091  1.00  0.00
ATOM     10  CA  ASN    77      -0.005   8.981   6.704  1.00  0.00
ATOM     11  CB  ASN    77       0.869   8.222   5.704  1.00  0.00
ATOM     12  CG  ASN    77       0.160   7.964   4.389  1.00  0.00
ATOM     13  ND2 ASN    77       0.761   7.132   3.545  1.00  0.00
ATOM     14  OD1 ASN    77      -0.916   8.506   4.135  1.00  0.00
ATOM     15  O   ASN    77      -1.796  10.537   6.169  1.00  0.00
ATOM     16  C   ASN    77      -0.591  10.273   6.058  1.00  0.00
ATOM     17  N   HIS    78       0.247  11.097   5.443  1.00  0.00
ATOM     18  CA  HIS    78      -0.227  12.326   4.820  1.00  0.00
ATOM     19  CB  HIS    78      -0.196  13.481   5.823  1.00  0.00
ATOM     20  CG  HIS    78      -1.079  13.271   7.013  1.00  0.00
ATOM     21  CD2 HIS    78      -0.873  12.886   8.403  1.00  0.00
ATOM     22  ND1 HIS    78      -2.445  13.437   6.966  1.00  0.00
ATOM     23  CE1 HIS    78      -2.961  13.179   8.181  1.00  0.00
ATOM     24  NE2 HIS    78      -2.023  12.847   9.048  1.00  0.00
ATOM     25  O   HIS    78       1.836  12.249   3.643  1.00  0.00
ATOM     26  C   HIS    78       0.676  12.643   3.660  1.00  0.00
ATOM     27  N   ILE    79       0.155  13.398   2.716  1.00  0.00
ATOM     28  CA  ILE    79       0.917  13.764   1.535  1.00  0.00
ATOM     29  CB  ILE    79       0.000  14.276   0.408  1.00  0.00
ATOM     30  CG1 ILE    79      -1.004  13.195   0.005  1.00  0.00
ATOM     31  CG2 ILE    79       0.820  14.652  -0.816  1.00  0.00
ATOM     32  CD1 ILE    79      -0.362  11.918  -0.491  1.00  0.00
ATOM     33  O   ILE    79       3.080  14.808   1.285  1.00  0.00
ATOM     34  C   ILE    79       1.948  14.876   1.794  1.00  0.00
ATOM     35  N   ASP    80       1.574  15.856   2.619  1.00  0.00
ATOM     36  CA  ASP    80       2.414  17.013   2.951  1.00  0.00
ATOM     37  CB  ASP    80       1.807  18.298   2.383  1.00  0.00
ATOM     38  CG  ASP    80       2.740  19.486   2.502  1.00  0.00
ATOM     39  OD1 ASP    80       3.891  19.295   2.948  1.00  0.00
ATOM     40  OD2 ASP    80       2.321  20.608   2.148  1.00  0.00
ATOM     41  O   ASP    80       1.522  17.075   5.182  1.00  0.00
ATOM     42  C   ASP    80       2.527  17.153   4.473  1.00  0.00
ATOM     43  N   GLY    81       3.735  17.413   4.962  1.00  0.00
ATOM     44  CA  GLY    81       3.964  17.540   6.399  1.00  0.00
ATOM     45  O   GLY    81       3.110  18.893   8.185  1.00  0.00
ATOM     46  C   GLY    81       3.550  18.874   7.033  1.00  0.00
ATOM     47  N   ARG    82       3.681  19.969   6.285  1.00  0.00
ATOM     48  CA  ARG    82       3.352  21.318   6.762  1.00  0.00
ATOM     49  CB  ARG    82       3.582  22.349   5.654  1.00  0.00
ATOM     50  CG  ARG    82       3.405  23.790   6.102  1.00  0.00
ATOM     51  CD  ARG    82       3.684  24.760   4.966  1.00  0.00
ATOM     52  NE  ARG    82       5.070  24.685   4.511  1.00  0.00
ATOM     53  CZ  ARG    82       6.085  25.305   5.103  1.00  0.00
ATOM     54  NH1 ARG    82       7.313  25.179   4.620  1.00  0.00
ATOM     55  NH2 ARG    82       5.870  26.050   6.180  1.00  0.00
ATOM     56  O   ARG    82       0.968  21.343   6.445  1.00  0.00
ATOM     57  C   ARG    82       1.902  21.523   7.226  1.00  0.00
ATOM     58  N   ILE    83       1.700  21.871   8.515  1.00  0.00
ATOM     59  CA  ILE    83       0.356  22.099   9.063  1.00  0.00
ATOM     60  CB  ILE    83       0.373  22.139  10.602  1.00  0.00
ATOM     61  CG1 ILE    83       1.248  23.293  11.096  1.00  0.00
ATOM     62  CG2 ILE    83       0.929  20.838  11.162  1.00  0.00
ATOM     63  CD1 ILE    83       1.161  23.530  12.588  1.00  0.00
ATOM     64  O   ILE    83       0.588  24.374   8.333  1.00  0.00
ATOM     65  C   ILE    83      -0.186  23.430   8.554  1.00  0.00
ATOM     66  N   VAL    84      -1.506  23.502   8.391  1.00  0.00
ATOM     67  CA  VAL    84      -2.204  24.702   7.914  1.00  0.00
ATOM     68  CB  VAL    84      -2.245  24.756   6.375  1.00  0.00
ATOM     69  CG1 VAL    84      -0.839  24.853   5.807  1.00  0.00
ATOM     70  CG2 VAL    84      -2.905  23.503   5.817  1.00  0.00
ATOM     71  O   VAL    84      -4.166  23.583   8.743  1.00  0.00
ATOM     72  C   VAL    84      -3.639  24.665   8.457  1.00  0.00
ATOM     73  N   ASN    85      -4.280  25.829   8.590  1.00  0.00
ATOM     74  CA  ASN    85      -5.670  25.888   9.074  1.00  0.00
ATOM     75  CB  ASN    85      -6.139  27.340   9.181  1.00  0.00
ATOM     76  CG  ASN    85      -5.509  28.072  10.348  1.00  0.00
ATOM     77  ND2 ASN    85      -5.523  29.400  10.290  1.00  0.00
ATOM     78  OD1 ASN    85      -5.017  27.451  11.290  1.00  0.00
ATOM     79  O   ASN    85      -7.525  24.432   8.572  1.00  0.00
ATOM     80  C   ASN    85      -6.628  25.152   8.128  1.00  0.00
ATOM     81  N   GLU    86      -6.427  25.331   6.827  1.00  0.00
ATOM     82  CA  GLU    86      -7.256  24.688   5.810  1.00  0.00
ATOM     83  CB  GLU    86      -8.058  25.735   5.034  1.00  0.00
ATOM     84  CG  GLU    86      -9.064  26.498   5.878  1.00  0.00
ATOM     85  CD  GLU    86      -9.848  27.516   5.072  1.00  0.00
ATOM     86  OE1 GLU    86      -9.567  27.659   3.863  1.00  0.00
ATOM     87  OE2 GLU    86     -10.741  28.169   5.649  1.00  0.00
ATOM     88  O   GLU    86      -5.193  24.367   4.610  1.00  0.00
ATOM     89  C   GLU    86      -6.325  23.930   4.853  1.00  0.00
ATOM     90  N   PRO    87      -6.784  22.810   4.303  1.00  0.00
ATOM     91  CA  PRO    87      -5.954  22.009   3.391  1.00  0.00
ATOM     92  CB  PRO    87      -6.809  20.774   3.101  1.00  0.00
ATOM     93  CG  PRO    87      -7.666  20.619   4.313  1.00  0.00
ATOM     94  CD  PRO    87      -8.033  22.011   4.744  1.00  0.00
ATOM     95  O   PRO    87      -4.515  22.660   1.584  1.00  0.00
ATOM     96  C   PRO    87      -5.627  22.760   2.108  1.00  0.00
ATOM     97  N   SER    88      -6.594  23.546   1.637  1.00  0.00
ATOM     98  CA  SER    88      -6.459  24.346   0.419  1.00  0.00
ATOM     99  CB  SER    88      -7.730  25.160   0.168  1.00  0.00
ATOM    100  OG  SER    88      -7.917  26.136   1.178  1.00  0.00
ATOM    101  O   SER    88      -5.023  26.010  -0.535  1.00  0.00
ATOM    102  C   SER    88      -5.302  25.342   0.457  1.00  0.00
ATOM    103  N   GLU    89      -4.649  25.461   1.608  1.00  0.00
ATOM    104  CA  GLU    89      -3.518  26.371   1.761  1.00  0.00
ATOM    105  CB  GLU    89      -3.362  26.792   3.224  1.00  0.00
ATOM    106  CG  GLU    89      -4.516  27.628   3.755  1.00  0.00
ATOM    107  CD  GLU    89      -4.339  28.008   5.212  1.00  0.00
ATOM    108  OE1 GLU    89      -3.358  27.545   5.832  1.00  0.00
ATOM    109  OE2 GLU    89      -5.181  28.768   5.735  1.00  0.00
ATOM    110  O   GLU    89      -1.162  26.319   1.266  1.00  0.00
ATOM    111  C   GLU    89      -2.222  25.693   1.313  1.00  0.00
ATOM    112  N   LEU    90      -2.321  24.402   0.999  1.00  0.00
ATOM    113  CA  LEU    90      -1.181  23.616   0.539  1.00  0.00
ATOM    114  CB  LEU    90      -1.382  22.136   0.870  1.00  0.00
ATOM    115  CG  LEU    90      -1.509  21.785   2.355  1.00  0.00
ATOM    116  CD1 LEU    90      -1.796  20.303   2.534  1.00  0.00
ATOM    117  CD2 LEU    90      -0.223  22.114   3.097  1.00  0.00
ATOM    118  O   LEU    90      -2.073  23.695  -1.693  1.00  0.00
ATOM    119  C   LEU    90      -1.073  23.800  -0.975  1.00  0.00
ATOM    120  N   ASN    91       0.131  24.083  -1.458  1.00  0.00
ATOM    121  CA  ASN    91       0.322  24.297  -2.882  1.00  0.00
ATOM    122  CB  ASN    91       1.614  25.075  -3.139  1.00  0.00
ATOM    123  CG  ASN    91       1.522  26.519  -2.691  1.00  0.00
ATOM    124  ND2 ASN    91       2.673  27.132  -2.433  1.00  0.00
ATOM    125  OD1 ASN    91       0.431  27.078  -2.578  1.00  0.00
ATOM    126  O   ASN    91       0.842  21.957  -3.170  1.00  0.00
ATOM    127  C   ASN    91       0.416  23.004  -3.682  1.00  0.00
ATOM    128  N   GLN    92       0.071  23.108  -4.963  1.00  0.00
ATOM    129  CA  GLN    92       0.103  21.988  -5.890  1.00  0.00
ATOM    130  CB  GLN    92      -0.382  22.423  -7.274  1.00  0.00
ATOM    131  CG  GLN    92      -1.870  22.720  -7.346  1.00  0.00
ATOM    132  CD  GLN    92      -2.299  23.222  -8.711  1.00  0.00
ATOM    133  OE1 GLN    92      -1.475  23.391  -9.608  1.00  0.00
ATOM    134  NE2 GLN    92      -3.595  23.463  -8.870  1.00  0.00
ATOM    135  O   GLN    92       1.696  20.231  -6.289  1.00  0.00
ATOM    136  C   GLN    92       1.517  21.429  -6.040  1.00  0.00
ATOM    137  N   GLU    93       2.516  22.282  -5.828  1.00  0.00
ATOM    138  CA  GLU    93       3.916  21.871  -5.933  1.00  0.00
ATOM    139  CB  GLU    93       4.831  23.096  -5.992  1.00  0.00
ATOM    140  CG  GLU    93       4.727  23.884  -7.288  1.00  0.00
ATOM    141  CD  GLU    93       5.579  25.139  -7.275  1.00  0.00
ATOM    142  OE1 GLU    93       6.199  25.426  -6.230  1.00  0.00
ATOM    143  OE2 GLU    93       5.624  25.836  -8.310  1.00  0.00
ATOM    144  O   GLU    93       5.170  20.155  -4.814  1.00  0.00
ATOM    145  C   GLU    93       4.301  21.034  -4.726  1.00  0.00
ATOM    146  N   GLU    94       3.672  21.340  -3.591  1.00  0.00
ATOM    147  CA  GLU    94       3.921  20.614  -2.347  1.00  0.00
ATOM    148  CB  GLU    94       3.289  21.347  -1.163  1.00  0.00
ATOM    149  CG  GLU    94       3.974  22.655  -0.805  1.00  0.00
ATOM    150  CD  GLU    94       3.249  23.413   0.289  1.00  0.00
ATOM    151  OE1 GLU    94       2.170  22.950   0.718  1.00  0.00
ATOM    152  OE2 GLU    94       3.758  24.469   0.719  1.00  0.00
ATOM    153  O   GLU    94       3.897  18.224  -2.076  1.00  0.00
ATOM    154  C   GLU    94       3.306  19.228  -2.482  1.00  0.00
ATOM    155  N   VAL    95       2.107  19.195  -3.057  1.00  0.00
ATOM    156  CA  VAL    95       1.383  17.955  -3.265  1.00  0.00
ATOM    157  CB  VAL    95       0.049  18.197  -3.997  1.00  0.00
ATOM    158  CG1 VAL    95      -0.595  16.873  -4.380  1.00  0.00
ATOM    159  CG2 VAL    95      -0.916  18.962  -3.105  1.00  0.00
ATOM    160  O   VAL    95       2.383  15.829  -3.775  1.00  0.00
ATOM    161  C   VAL    95       2.229  17.009  -4.104  1.00  0.00
ATOM    162  N   GLU    96       2.872  17.553  -5.128  1.00  0.00
ATOM    163  CA  GLU    96       3.697  16.746  -6.001  1.00  0.00
ATOM    164  CB  GLU    96       4.179  17.570  -7.197  1.00  0.00
ATOM    165  CG  GLU    96       3.083  17.931  -8.186  1.00  0.00
ATOM    166  CD  GLU    96       3.572  18.849  -9.288  1.00  0.00
ATOM    167  OE1 GLU    96       4.750  19.260  -9.239  1.00  0.00
ATOM    168  OE2 GLU    96       2.777  19.156 -10.201  1.00  0.00
ATOM    169  O   GLU    96       5.320  15.001  -5.631  1.00  0.00
ATOM    170  C   GLU    96       4.963  16.156  -5.369  1.00  0.00
ATOM    171  N   THR    97       5.672  16.933  -4.562  1.00  0.00
ATOM    172  CA  THR    97       6.887  16.404  -3.945  1.00  0.00
ATOM    173  CB  THR    97       7.667  17.504  -3.200  1.00  0.00
ATOM    174  CG2 THR    97       8.078  18.610  -4.161  1.00  0.00
ATOM    175  OG1 THR    97       6.843  18.067  -2.172  1.00  0.00
ATOM    176  O   THR    97       7.247  14.357  -2.719  1.00  0.00
ATOM    177  C   THR    97       6.498  15.315  -2.945  1.00  0.00
ATOM    178  N   LEU    98       5.285  15.432  -2.407  1.00  0.00
ATOM    179  CA  LEU    98       4.802  14.459  -1.452  1.00  0.00
ATOM    180  CB  LEU    98       3.506  14.947  -0.801  1.00  0.00
ATOM    181  CG  LEU    98       3.626  16.160   0.123  1.00  0.00
ATOM    182  CD1 LEU    98       2.252  16.630   0.576  1.00  0.00
ATOM    183  CD2 LEU    98       4.441  15.816   1.359  1.00  0.00
ATOM    184  O   LEU    98       4.652  12.072  -1.461  1.00  0.00
ATOM    185  C   LEU    98       4.515  13.123  -2.103  1.00  0.00
ATOM    186  N   ALA    99       4.116  13.164  -3.374  1.00  0.00
ATOM    187  CA  ALA    99       3.794  11.951  -4.107  1.00  0.00
ATOM    188  CB  ALA    99       3.432  12.283  -5.547  1.00  0.00
ATOM    189  O   ALA    99       4.644   9.736  -4.038  1.00  0.00
ATOM    190  C   ALA    99       4.907  10.928  -4.184  1.00  0.00
ATOM    191  N   ARG   100       6.134  11.380  -4.432  1.00  0.00
ATOM    192  CA  ARG   100       7.289  10.480  -4.507  1.00  0.00
ATOM    193  CB  ARG   100       8.554  11.259  -4.870  1.00  0.00
ATOM    194  CG  ARG   100       8.583  11.764  -6.304  1.00  0.00
ATOM    195  CD  ARG   100       9.843  12.568  -6.581  1.00  0.00
ATOM    196  NE  ARG   100       9.862  13.101  -7.941  1.00  0.00
ATOM    197  CZ  ARG   100      10.823  13.884  -8.422  1.00  0.00
ATOM    198  NH1 ARG   100      10.757  14.323  -9.671  1.00  0.00
ATOM    199  NH2 ARG   100      11.847  14.227  -7.653  1.00  0.00
ATOM    200  O   ARG   100       7.778   8.551  -3.160  1.00  0.00
ATOM    201  C   ARG   100       7.556   9.762  -3.180  1.00  0.00
ATOM    202  N   PRO   101       7.576  10.510  -2.078  1.00  0.00
ATOM    203  CA  PRO   101       7.809   9.883  -0.774  1.00  0.00
ATOM    204  CB  PRO   101       7.847  11.061   0.202  1.00  0.00
ATOM    205  CG  PRO   101       8.318  12.212  -0.621  1.00  0.00
ATOM    206  CD  PRO   101       7.675  12.052  -1.970  1.00  0.00
ATOM    207  O   PRO   101       6.893   7.838   0.093  1.00  0.00
ATOM    208  C   PRO   101       6.659   8.909  -0.465  1.00  0.00
ATOM    209  N   CYS   102       5.423   9.274  -0.822  1.00  0.00
ATOM    210  CA  CYS   102       4.283   8.399  -0.546  1.00  0.00
ATOM    211  CB  CYS   102       2.980   9.049  -1.019  1.00  0.00
ATOM    212  SG  CYS   102       2.474  10.492  -0.054  1.00  0.00
ATOM    213  O   CYS   102       4.300   6.001  -0.686  1.00  0.00
ATOM    214  C   CYS   102       4.462   7.070  -1.278  1.00  0.00
ATOM    215  N   LEU   103       4.820   7.135  -2.554  1.00  0.00
ATOM    216  CA  LEU   103       5.037   5.919  -3.322  1.00  0.00
ATOM    217  CB  LEU   103       5.529   6.256  -4.731  1.00  0.00
ATOM    218  CG  LEU   103       5.816   5.068  -5.651  1.00  0.00
ATOM    219  CD1 LEU   103       4.553   4.255  -5.889  1.00  0.00
ATOM    220  CD2 LEU   103       6.335   5.545  -6.999  1.00  0.00
ATOM    221  O   LEU   103       5.888   3.827  -2.470  1.00  0.00
ATOM    222  C   LEU   103       6.092   5.030  -2.635  1.00  0.00
ATOM    223  N   ASN   104       7.194   5.619  -2.194  1.00  0.00
ATOM    224  CA  ASN   104       8.221   4.839  -1.502  1.00  0.00
ATOM    225  CB  ASN   104       9.384   5.739  -1.079  1.00  0.00
ATOM    226  CG  ASN   104      10.243   6.169  -2.252  1.00  0.00
ATOM    227  ND2 ASN   104      11.001   7.244  -2.066  1.00  0.00
ATOM    228  OD1 ASN   104      10.223   5.542  -3.312  1.00  0.00
ATOM    229  O   ASN   104       7.998   3.011   0.043  1.00  0.00
ATOM    230  C   ASN   104       7.667   4.161  -0.233  1.00  0.00
ATOM    231  N   MET   105       6.848   4.881   0.540  1.00  0.00
ATOM    232  CA  MET   105       6.252   4.338   1.774  1.00  0.00
ATOM    233  CB  MET   105       5.403   5.402   2.470  1.00  0.00
ATOM    234  CG  MET   105       6.206   6.544   3.071  1.00  0.00
ATOM    235  SD  MET   105       5.163   7.841   3.765  1.00  0.00
ATOM    236  CE  MET   105       4.451   6.987   5.168  1.00  0.00
ATOM    237  O   MET   105       5.465   2.115   2.152  1.00  0.00
ATOM    238  C   MET   105       5.357   3.144   1.487  1.00  0.00
ATOM    239  N   LEU   106       4.487   3.274   0.489  1.00  0.00
ATOM    240  CA  LEU   106       3.565   2.202   0.123  1.00  0.00
ATOM    241  CB  LEU   106       2.598   2.674  -0.963  1.00  0.00
ATOM    242  CG  LEU   106       1.566   3.724  -0.543  1.00  0.00
ATOM    243  CD1 LEU   106       0.793   4.232  -1.751  1.00  0.00
ATOM    244  CD2 LEU   106       0.571   3.133   0.445  1.00  0.00
ATOM    245  O   LEU   106       3.952  -0.153  -0.133  1.00  0.00
ATOM    246  C   LEU   106       4.331   0.990  -0.410  1.00  0.00
ATOM    247  N   ASN   107       5.409   1.234  -1.158  1.00  0.00
ATOM    248  CA  ASN   107       6.247   0.160  -1.680  1.00  0.00
ATOM    249  CB  ASN   107       7.309   0.722  -2.626  1.00  0.00
ATOM    250  CG  ASN   107       6.729   1.172  -3.953  1.00  0.00
ATOM    251  ND2 ASN   107       7.453   2.040  -4.651  1.00  0.00
ATOM    252  OD1 ASN   107       5.644   0.742  -4.344  1.00  0.00
ATOM    253  O   ASN   107       7.248  -1.741  -0.610  1.00  0.00
ATOM    254  C   ASN   107       6.939  -0.552  -0.522  1.00  0.00
ATOM    255  N   ARG   108       7.172   0.166   0.567  1.00  0.00
ATOM    256  CA  ARG   108       7.793  -0.410   1.761  1.00  0.00
ATOM    257  CB  ARG   108       8.329   0.696   2.673  1.00  0.00
ATOM    258  CG  ARG   108       9.030   0.186   3.922  1.00  0.00
ATOM    259  CD  ARG   108       9.606   1.331   4.738  1.00  0.00
ATOM    260  NE  ARG   108      10.255   0.860   5.960  1.00  0.00
ATOM    261  CZ  ARG   108      10.815   1.657   6.862  1.00  0.00
ATOM    262  NH1 ARG   108      11.382   1.139   7.945  1.00  0.00
ATOM    263  NH2 ARG   108      10.807   2.971   6.683  1.00  0.00
ATOM    264  O   ARG   108       6.960  -2.458   2.759  1.00  0.00
ATOM    265  C   ARG   108       6.788  -1.252   2.582  1.00  0.00
ATOM    266  N   LEU   109       5.710  -0.622   3.023  1.00  0.00
ATOM    267  CA  LEU   109       4.703  -1.282   3.850  1.00  0.00
ATOM    268  CB  LEU   109       3.802  -0.246   4.527  1.00  0.00
ATOM    269  CG  LEU   109       4.476   0.674   5.546  1.00  0.00
ATOM    270  CD1 LEU   109       3.494   1.714   6.062  1.00  0.00
ATOM    271  CD2 LEU   109       4.990  -0.125   6.735  1.00  0.00
ATOM    272  O   LEU   109       3.210  -3.163   3.761  1.00  0.00
ATOM    273  C   LEU   109       3.747  -2.236   3.139  1.00  0.00
ATOM    274  N   THR   110       3.541  -2.026   1.839  1.00  0.00
ATOM    275  CA  THR   110       2.687  -2.899   1.044  1.00  0.00
ATOM    276  CB  THR   110       3.333  -4.281   0.834  1.00  0.00
ATOM    277  CG2 THR   110       4.689  -4.138   0.160  1.00  0.00
ATOM    278  OG1 THR   110       3.512  -4.927   2.101  1.00  0.00
ATOM    279  O   THR   110       0.943  -4.414   1.747  1.00  0.00
ATOM    280  C   THR   110       1.281  -3.237   1.573  1.00  0.00
ATOM    281  N   TYR   111      -9.766  14.361  -4.129  1.00  0.00
ATOM    282  CA  TYR   111      -9.453  14.221  -5.547  1.00  0.00
ATOM    283  CB  TYR   111     -10.639  14.670  -6.403  1.00  0.00
ATOM    284  CG  TYR   111     -11.790  13.689  -6.420  1.00  0.00
ATOM    285  CD1 TYR   111     -12.930  13.918  -5.661  1.00  0.00
ATOM    286  CD2 TYR   111     -11.732  12.538  -7.196  1.00  0.00
ATOM    287  CE1 TYR   111     -13.986  13.028  -5.669  1.00  0.00
ATOM    288  CE2 TYR   111     -12.779  11.638  -7.217  1.00  0.00
ATOM    289  CZ  TYR   111     -13.912  11.891  -6.445  1.00  0.00
ATOM    290  OH  TYR   111     -14.962  11.003  -6.455  1.00  0.00
ATOM    291  O   TYR   111      -7.344  14.569  -6.631  1.00  0.00
ATOM    292  C   TYR   111      -8.248  15.056  -5.954  1.00  0.00
ATOM    293  N   GLU   112      -8.218  16.301  -5.498  1.00  0.00
ATOM    294  CA  GLU   112      -7.129  17.218  -5.801  1.00  0.00
ATOM    295  CB  GLU   112      -7.362  18.569  -5.121  1.00  0.00
ATOM    296  CG  GLU   112      -6.294  19.607  -5.421  1.00  0.00
ATOM    297  CD  GLU   112      -6.575  20.941  -4.759  1.00  0.00
ATOM    298  OE1 GLU   112      -7.614  21.059  -4.077  1.00  0.00
ATOM    299  OE2 GLU   112      -5.757  21.871  -4.923  1.00  0.00
ATOM    300  O   GLU   112      -4.804  16.625  -6.024  1.00  0.00
ATOM    301  C   GLU   112      -5.803  16.639  -5.300  1.00  0.00
ATOM    302  N   VAL   113      -5.806  16.149  -4.067  1.00  0.00
ATOM    303  CA  VAL   113      -4.619  15.554  -3.474  1.00  0.00
ATOM    304  CB  VAL   113      -4.926  14.934  -2.097  1.00  0.00
ATOM    305  CG1 VAL   113      -3.731  14.138  -1.594  1.00  0.00
ATOM    306  CG2 VAL   113      -5.241  16.021  -1.082  1.00  0.00
ATOM    307  O   VAL   113      -2.899  14.444  -4.702  1.00  0.00
ATOM    308  C   VAL   113      -4.088  14.461  -4.382  1.00  0.00
ATOM    309  N   THR   114      -4.973  13.569  -4.827  1.00  0.00
ATOM    310  CA  THR   114      -4.581  12.468  -5.720  1.00  0.00
ATOM    311  CB  THR   114      -5.786  11.582  -6.088  1.00  0.00
ATOM    312  CG2 THR   114      -5.362  10.478  -7.045  1.00  0.00
ATOM    313  OG1 THR   114      -6.325  10.988  -4.901  1.00  0.00
ATOM    314  O   THR   114      -2.916  12.488  -7.467  1.00  0.00
ATOM    315  C   THR   114      -3.980  12.962  -7.036  1.00  0.00
ATOM    316  N   GLU   115      -4.716  13.863  -7.686  1.00  0.00
ATOM    317  CA  GLU   115      -4.325  14.450  -8.959  1.00  0.00
ATOM    318  CB  GLU   115      -5.329  15.524  -9.383  1.00  0.00
ATOM    319  CG  GLU   115      -6.682  14.978  -9.807  1.00  0.00
ATOM    320  CD  GLU   115      -7.692  16.074 -10.089  1.00  0.00
ATOM    321  OE1 GLU   115      -7.358  17.258  -9.872  1.00  0.00
ATOM    322  OE2 GLU   115      -8.815  15.748 -10.523  1.00  0.00
ATOM    323  O   GLU   115      -2.115  14.852  -9.791  1.00  0.00
ATOM    324  C   GLU   115      -2.964  15.110  -8.930  1.00  0.00
ATOM    325  N   ILE   116      -2.741  15.949  -7.932  1.00  0.00
ATOM    326  CA  ILE   116      -1.455  16.617  -7.836  1.00  0.00
ATOM    327  CB  ILE   116      -1.492  17.766  -6.811  1.00  0.00
ATOM    328  CG1 ILE   116      -2.405  18.891  -7.301  1.00  0.00
ATOM    329  CG2 ILE   116      -0.098  18.334  -6.598  1.00  0.00
ATOM    330  CD1 ILE   116      -2.710  19.934  -6.250  1.00  0.00
ATOM    331  O   ILE   116       0.719  15.669  -8.020  1.00  0.00
ATOM    332  C   ILE   116      -0.336  15.688  -7.404  1.00  0.00
ATOM    333  N   ALA   117      -0.571  14.895  -6.365  1.00  0.00
ATOM    334  CA  ALA   117       0.454  13.980  -5.901  1.00  0.00
ATOM    335  CB  ALA   117      -0.024  13.228  -4.668  1.00  0.00
ATOM    336  O   ALA   117       2.040  12.514  -6.953  1.00  0.00
ATOM    337  C   ALA   117       0.875  12.916  -6.903  1.00  0.00
ATOM    338  N   LEU   118      -0.061  12.446  -7.709  1.00  0.00
ATOM    339  CA  LEU   118       0.267  11.418  -8.672  1.00  0.00
ATOM    340  CB  LEU   118      -0.770  10.293  -8.630  1.00  0.00
ATOM    341  CG  LEU   118      -0.904   9.543  -7.304  1.00  0.00
ATOM    342  CD1 LEU   118      -2.044   8.538  -7.366  1.00  0.00
ATOM    343  CD2 LEU   118       0.377   8.789  -6.979  1.00  0.00
ATOM    344  O   LEU   118       0.457  11.041 -11.035  1.00  0.00
ATOM    345  C   LEU   118       0.327  11.872 -10.129  1.00  0.00
ATOM    346  N   ASP   119       0.252  13.180 -10.359  1.00  0.00
ATOM    347  CA  ASP   119       0.305  13.727 -11.721  1.00  0.00
ATOM    348  CB  ASP   119       1.675  13.463 -12.352  1.00  0.00
ATOM    349  CG  ASP   119       2.799  14.174 -11.626  1.00  0.00
ATOM    350  OD1 ASP   119       2.665  15.391 -11.372  1.00  0.00
ATOM    351  OD2 ASP   119       3.811  13.517 -11.308  1.00  0.00
ATOM    352  O   ASP   119      -0.449  12.623 -13.739  1.00  0.00
ATOM    353  C   ASP   119      -0.753  13.107 -12.640  1.00  0.00
ATOM    354  N   LEU   120      -1.981  13.084 -12.141  1.00  0.00
ATOM    355  CA  LEU   120      -3.133  12.559 -12.860  1.00  0.00
ATOM    356  CB  LEU   120      -3.820  11.461 -12.043  1.00  0.00
ATOM    357  CG  LEU   120      -2.960  10.248 -11.682  1.00  0.00
ATOM    358  CD1 LEU   120      -3.724   9.301 -10.769  1.00  0.00
ATOM    359  CD2 LEU   120      -2.561   9.481 -12.934  1.00  0.00
ATOM    360  O   LEU   120      -3.974  14.779 -12.422  1.00  0.00
ATOM    361  C   LEU   120      -4.088  13.738 -13.078  1.00  0.00
ATOM    362  N   PRO   121      -5.017  13.582 -14.012  1.00  0.00
ATOM    363  CA  PRO   121      -5.995  14.629 -14.306  1.00  0.00
ATOM    364  CB  PRO   121      -5.401  15.362 -15.511  1.00  0.00
ATOM    365  CG  PRO   121      -4.562  14.336 -16.196  1.00  0.00
ATOM    366  CD  PRO   121      -3.987  13.474 -15.108  1.00  0.00
ATOM    367  O   PRO   121      -7.363  12.853 -15.138  1.00  0.00
ATOM    368  C   PRO   121      -7.329  13.978 -14.625  1.00  0.00
ATOM    369  N   GLY   122      -8.415  14.667 -14.270  1.00  0.00
ATOM    370  CA  GLY   122      -9.762  14.179 -14.530  1.00  0.00
ATOM    371  O   GLY   122     -10.578  11.924 -14.580  1.00  0.00
ATOM    372  C   GLY   122     -10.039  12.824 -13.915  1.00  0.00
ATOM    373  N   ILE   123      -9.665  12.674 -12.647  1.00  0.00
ATOM    374  CA  ILE   123      -9.848  11.424 -11.931  1.00  0.00
ATOM    375  CB  ILE   123      -8.956  11.355 -10.679  1.00  0.00
ATOM    376  CG1 ILE   123      -9.326  12.467  -9.696  1.00  0.00
ATOM    377  CG2 ILE   123      -7.492  11.517 -11.058  1.00  0.00
ATOM    378  CD1 ILE   123      -8.648  12.346  -8.351  1.00  0.00
ATOM    379  O   ILE   123     -11.989  12.267 -11.322  1.00  0.00
ATOM    380  C   ILE   123     -11.289  11.276 -11.486  1.00  0.00
ATOM    381  N   ASN   124     -11.742  10.031 -11.386  1.00  0.00
ATOM    382  CA  ASN   124     -13.092   9.714 -10.923  1.00  0.00
ATOM    383  CB  ASN   124     -13.707   8.608 -11.782  1.00  0.00
ATOM    384  CG  ASN   124     -15.187   8.416 -11.515  1.00  0.00
ATOM    385  ND2 ASN   124     -15.705   7.246 -11.872  1.00  0.00
ATOM    386  OD1 ASN   124     -15.853   9.311 -10.995  1.00  0.00
ATOM    387  O   ASN   124     -11.856   8.835  -9.072  1.00  0.00
ATOM    388  C   ASN   124     -12.938   9.251  -9.469  1.00  0.00
TER
END



