
PFRMAT TS
TARGET T0383
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0383 model 4 Mon Jul 17 15:01:51 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  4
PARENT N/A
ATOM      2  N   ILE    55      -3.499   8.460  -0.213  1.00  0.00
ATOM      3  CA  ILE    55      -3.060   8.068  -1.549  1.00  0.00
ATOM      4  CB  ILE    55      -1.577   8.411  -1.780  1.00  0.00
ATOM      5  CG1 ILE    55      -1.360   9.923  -1.696  1.00  0.00
ATOM      6  CG2 ILE    55      -1.127   7.934  -3.151  1.00  0.00
ATOM      7  CD1 ILE    55      -2.076  10.702  -2.776  1.00  0.00
ATOM      8  O   ILE    55      -2.891   5.849  -0.673  1.00  0.00
ATOM      9  C   ILE    55      -3.287   6.550  -1.603  1.00  0.00
ATOM     10  N   VAL    56      -3.917   6.054  -2.671  1.00  0.00
ATOM     11  CA  VAL    56      -4.228   4.627  -2.846  1.00  0.00
ATOM     12  CB  VAL    56      -5.748   4.383  -2.893  1.00  0.00
ATOM     13  CG1 VAL    56      -6.394   4.788  -1.575  1.00  0.00
ATOM     14  CG2 VAL    56      -6.383   5.196  -4.010  1.00  0.00
ATOM     15  O   VAL    56      -3.583   4.780  -5.130  1.00  0.00
ATOM     16  C   VAL    56      -3.649   4.067  -4.132  1.00  0.00
ATOM     17  N   ILE    57      -3.246   2.793  -4.111  1.00  0.00
ATOM     18  CA  ILE    57      -2.725   2.092  -5.284  1.00  0.00
ATOM     19  CB  ILE    57      -1.190   1.993  -5.245  1.00  0.00
ATOM     20  CG1 ILE    57      -0.565   3.391  -5.241  1.00  0.00
ATOM     21  CG2 ILE    57      -0.674   1.239  -6.462  1.00  0.00
ATOM     22  CD1 ILE    57       0.932   3.390  -5.024  1.00  0.00
ATOM     23  O   ILE    57      -3.425  -0.008  -4.344  1.00  0.00
ATOM     24  C   ILE    57      -3.272   0.666  -5.373  1.00  0.00
ATOM     25  N   LEU    58      -3.560   0.201  -6.578  1.00  0.00
ATOM     26  CA  LEU    58      -3.978  -1.191  -6.763  1.00  0.00
ATOM     27  CB  LEU    58      -5.473  -1.265  -7.077  1.00  0.00
ATOM     28  CG  LEU    58      -6.421  -0.757  -5.987  1.00  0.00
ATOM     29  CD1 LEU    58      -7.853  -0.714  -6.498  1.00  0.00
ATOM     30  CD2 LEU    58      -6.378  -1.667  -4.770  1.00  0.00
ATOM     31  O   LEU    58      -2.996  -1.103  -8.947  1.00  0.00
ATOM     32  C   LEU    58      -3.180  -1.764  -7.919  1.00  0.00
ATOM     33  N   SER    59      -2.679  -2.983  -7.747  1.00  0.00
ATOM     34  CA  SER    59      -1.945  -3.627  -8.819  1.00  0.00
ATOM     35  CB  SER    59      -0.546  -4.026  -8.346  1.00  0.00
ATOM     36  OG  SER    59       0.233  -2.884  -8.037  1.00  0.00
ATOM     37  O   SER    59      -3.331  -5.532  -8.352  1.00  0.00
ATOM     38  C   SER    59      -2.751  -4.867  -9.215  1.00  0.00
ATOM     39  N   PHE    60      -2.785  -5.160 -10.514  1.00  0.00
ATOM     40  CA  PHE    60      -3.572  -6.267 -11.047  1.00  0.00
ATOM     41  CB  PHE    60      -5.001  -5.811 -11.350  1.00  0.00
ATOM     42  CG  PHE    60      -5.089  -4.760 -12.419  1.00  0.00
ATOM     43  CD1 PHE    60      -5.283  -5.114 -13.742  1.00  0.00
ATOM     44  CD2 PHE    60      -4.976  -3.418 -12.101  1.00  0.00
ATOM     45  CE1 PHE    60      -5.364  -4.146 -14.726  1.00  0.00
ATOM     46  CE2 PHE    60      -5.057  -2.451 -13.084  1.00  0.00
ATOM     47  CZ  PHE    60      -5.250  -2.810 -14.392  1.00  0.00
ATOM     48  O   PHE    60      -2.181  -6.247 -13.019  1.00  0.00
ATOM     49  C   PHE    60      -3.021  -6.856 -12.340  1.00  0.00
ATOM     50  N   MET    61      -3.496  -8.052 -12.682  1.00  0.00
ATOM     51  CA  MET    61      -3.144  -8.673 -13.952  1.00  0.00
ATOM     52  CB  MET    61      -2.160  -9.824 -13.730  1.00  0.00
ATOM     53  CG  MET    61      -0.831  -9.398 -13.129  1.00  0.00
ATOM     54  SD  MET    61       0.328 -10.768 -12.959  1.00  0.00
ATOM     55  CE  MET    61       0.831 -11.000 -14.663  1.00  0.00
ATOM     56  O   MET    61      -5.483  -9.222 -13.976  1.00  0.00
ATOM     57  C   MET    61      -4.418  -9.209 -14.594  1.00  0.00
ATOM     58  N   ILE    62      -4.308  -9.633 -15.844  1.00  0.00
ATOM     59  CA  ILE    62      -5.437 -10.232 -16.527  1.00  0.00
ATOM     60  CB  ILE    62      -5.828  -9.429 -17.781  1.00  0.00
ATOM     61  CG1 ILE    62      -6.234  -8.005 -17.397  1.00  0.00
ATOM     62  CG2 ILE    62      -7.000 -10.089 -18.492  1.00  0.00
ATOM     63  CD1 ILE    62      -6.415  -7.081 -18.584  1.00  0.00
ATOM     64  O   ILE    62      -3.930 -11.837 -17.481  1.00  0.00
ATOM     65  C   ILE    62      -5.013 -11.638 -16.924  1.00  0.00
ATOM     66  N   VAL    63      -5.874 -12.608 -16.613  1.00  0.00
ATOM     67  CA  VAL    63      -5.644 -14.007 -16.915  1.00  0.00
ATOM     68  CB  VAL    63      -5.300 -14.809 -15.647  1.00  0.00
ATOM     69  CG1 VAL    63      -5.092 -16.277 -15.985  1.00  0.00
ATOM     70  CG2 VAL    63      -4.026 -14.278 -15.008  1.00  0.00
ATOM     71  O   VAL    63      -7.999 -14.427 -16.920  1.00  0.00
ATOM     72  C   VAL    63      -6.934 -14.540 -17.533  1.00  0.00
ATOM     73  N   PHE    64      -6.829 -15.103 -18.740  1.00  0.00
ATOM     74  CA  PHE    64      -7.974 -15.638 -19.505  1.00  0.00
ATOM     75  CB  PHE    64      -8.604 -16.822 -18.769  1.00  0.00
ATOM     76  CG  PHE    64      -7.655 -17.962 -18.531  1.00  0.00
ATOM     77  CD1 PHE    64      -7.065 -18.144 -17.292  1.00  0.00
ATOM     78  CD2 PHE    64      -7.354 -18.854 -19.545  1.00  0.00
ATOM     79  CE1 PHE    64      -6.193 -19.193 -17.074  1.00  0.00
ATOM     80  CE2 PHE    64      -6.481 -19.903 -19.327  1.00  0.00
ATOM     81  CZ  PHE    64      -5.901 -20.075 -18.096  1.00  0.00
ATOM     82  O   PHE    64     -10.271 -14.925 -19.880  1.00  0.00
ATOM     83  C   PHE    64      -9.092 -14.584 -19.726  1.00  0.00
ATOM     84  N   ASP    65      -8.694 -13.310 -19.742  1.00  0.00
ATOM     85  CA  ASP    65      -9.603 -12.191 -19.932  1.00  0.00
ATOM     86  CB  ASP    65     -10.828 -12.626 -20.737  1.00  0.00
ATOM     87  CG  ASP    65     -10.501 -12.908 -22.190  1.00  0.00
ATOM     88  OD1 ASP    65      -9.410 -12.501 -22.643  1.00  0.00
ATOM     89  OD2 ASP    65     -11.335 -13.538 -22.875  1.00  0.00
ATOM     90  O   ASP    65     -10.721 -10.509 -18.612  1.00  0.00
ATOM     91  C   ASP    65     -10.119 -11.597 -18.631  1.00  0.00
ATOM     92  N   LYS    66      -9.876 -12.325 -17.544  1.00  0.00
ATOM     93  CA  LYS    66     -10.328 -11.946 -16.210  1.00  0.00
ATOM     94  CB  LYS    66     -10.625 -13.191 -15.372  1.00  0.00
ATOM     95  CG  LYS    66     -11.810 -14.005 -15.867  1.00  0.00
ATOM     96  CD  LYS    66     -12.025 -15.244 -15.011  1.00  0.00
ATOM     97  CE  LYS    66     -13.183 -16.080 -15.532  1.00  0.00
ATOM     98  NZ  LYS    66     -13.402 -17.299 -14.707  1.00  0.00
ATOM     99  O   LYS    66      -8.127 -11.399 -15.378  1.00  0.00
ATOM    100  C   LYS    66      -9.320 -11.116 -15.404  1.00  0.00
ATOM    101  N   PHE    67      -9.820 -10.057 -14.759  1.00  0.00
ATOM    102  CA  PHE    67      -8.989  -9.201 -13.922  1.00  0.00
ATOM    103  CB  PHE    67      -9.700  -7.876 -13.639  1.00  0.00
ATOM    104  CG  PHE    67      -9.761  -6.956 -14.825  1.00  0.00
ATOM    105  CD1 PHE    67     -10.910  -6.867 -15.591  1.00  0.00
ATOM    106  CD2 PHE    67      -8.671  -6.177 -15.172  1.00  0.00
ATOM    107  CE1 PHE    67     -10.966  -6.020 -16.681  1.00  0.00
ATOM    108  CE2 PHE    67      -8.728  -5.331 -16.263  1.00  0.00
ATOM    109  CZ  PHE    67      -9.869  -5.250 -17.016  1.00  0.00
ATOM    110  O   PHE    67      -9.567 -10.707 -12.140  1.00  0.00
ATOM    111  C   PHE    67      -8.725  -9.935 -12.609  1.00  0.00
ATOM    112  N   VAL    68      -7.553  -9.702 -12.028  1.00  0.00
ATOM    113  CA  VAL    68      -7.162 -10.325 -10.731  1.00  0.00
ATOM    114  CB  VAL    68      -6.525 -11.711 -10.940  1.00  0.00
ATOM    115  CG1 VAL    68      -6.134 -12.323  -9.603  1.00  0.00
ATOM    116  CG2 VAL    68      -7.502 -12.648 -11.631  1.00  0.00
ATOM    117  O   VAL    68      -5.085  -9.108 -10.510  1.00  0.00
ATOM    118  C   VAL    68      -6.144  -9.458  -9.982  1.00  0.00
ATOM    119  N   ILE    69      -6.495  -9.126  -8.745  1.00  0.00
ATOM    120  CA  ILE    69      -5.716  -8.204  -7.922  1.00  0.00
ATOM    121  CB  ILE    69      -6.563  -7.618  -6.777  1.00  0.00
ATOM    122  CG1 ILE    69      -7.726  -6.799  -7.337  1.00  0.00
ATOM    123  CG2 ILE    69      -5.715  -6.712  -5.898  1.00  0.00
ATOM    124  CD1 ILE    69      -8.738  -6.381  -6.293  1.00  0.00
ATOM    125  O   ILE    69      -4.627  -9.956  -6.677  1.00  0.00
ATOM    126  C   ILE    69      -4.507  -8.885  -7.284  1.00  0.00
ATOM    127  N   SER    70      -3.354  -8.238  -7.439  1.00  0.00
ATOM    128  CA  SER    70      -2.053  -8.715  -6.973  1.00  0.00
ATOM    129  CB  SER    70      -0.958  -8.357  -7.981  1.00  0.00
ATOM    130  OG  SER    70      -1.229  -8.925  -9.251  1.00  0.00
ATOM    131  O   SER    70      -1.094  -8.781  -4.731  1.00  0.00
ATOM    132  C   SER    70      -1.665  -8.098  -5.625  1.00  0.00
ATOM    133  N   GLY    71      -1.957  -6.810  -5.484  1.00  0.00
ATOM    134  CA  GLY    71      -1.655  -6.065  -4.279  1.00  0.00
ATOM    135  O   GLY    71      -2.827  -4.168  -5.189  1.00  0.00
ATOM    136  C   GLY    71      -2.387  -4.749  -4.173  1.00  0.00
ATOM    137  N   THR    72      -2.530  -4.260  -2.945  1.00  0.00
ATOM    138  CA  THR    72      -3.158  -2.953  -2.734  1.00  0.00
ATOM    139  CB  THR    72      -4.584  -3.095  -2.171  1.00  0.00
ATOM    140  CG2 THR    72      -5.218  -1.727  -1.972  1.00  0.00
ATOM    141  OG1 THR    72      -5.388  -3.851  -3.086  1.00  0.00
ATOM    142  O   THR    72      -1.747  -2.781  -0.833  1.00  0.00
ATOM    143  C   THR    72      -2.298  -2.192  -1.748  1.00  0.00
ATOM    144  N   ILE    73      -2.185  -0.883  -1.949  1.00  0.00
ATOM    145  CA  ILE    73      -1.392  -0.023  -1.083  1.00  0.00
ATOM    146  CB  ILE    73      -0.073   0.396  -1.759  1.00  0.00
ATOM    147  CG1 ILE    73       0.781  -0.836  -2.071  1.00  0.00
ATOM    148  CG2 ILE    73       0.724   1.316  -0.847  1.00  0.00
ATOM    149  CD1 ILE    73       1.986  -0.539  -2.935  1.00  0.00
ATOM    150  O   ILE    73      -2.915   1.815  -1.541  1.00  0.00
ATOM    151  C   ILE    73      -2.159   1.258  -0.728  1.00  0.00
ATOM    152  N   SER    74      -1.946   1.712   0.505  1.00  0.00
ATOM    153  CA  SER    74      -2.642   2.872   1.022  1.00  0.00
ATOM    154  CB  SER    74      -3.945   2.453   1.706  1.00  0.00
ATOM    155  OG  SER    74      -4.619   3.575   2.248  1.00  0.00
ATOM    156  O   SER    74      -1.176   2.922   2.900  1.00  0.00
ATOM    157  C   SER    74      -1.753   3.564   2.022  1.00  0.00
ATOM    158  N   GLN    75      -1.637   4.880   1.885  1.00  0.00
ATOM    159  CA  GLN    75      -0.834   5.665   2.810  1.00  0.00
ATOM    160  CB  GLN    75       0.511   6.025   2.177  1.00  0.00
ATOM    161  CG  GLN    75       1.446   6.788   3.100  1.00  0.00
ATOM    162  CD  GLN    75       2.818   7.005   2.490  1.00  0.00
ATOM    163  OE1 GLN    75       3.031   6.738   1.307  1.00  0.00
ATOM    164  NE2 GLN    75       3.753   7.493   3.297  1.00  0.00
ATOM    165  O   GLN    75      -1.947   7.722   2.272  1.00  0.00
ATOM    166  C   GLN    75      -1.589   6.940   3.150  1.00  0.00
ATOM    167  N   VAL    76      -1.828   7.129   4.441  1.00  0.00
ATOM    168  CA  VAL    76      -2.539   8.290   4.963  1.00  0.00
ATOM    169  CB  VAL    76      -2.890   8.114   6.451  1.00  0.00
ATOM    170  CG1 VAL    76      -3.649   9.328   6.968  1.00  0.00
ATOM    171  CG2 VAL    76      -3.760   6.883   6.652  1.00  0.00
ATOM    172  O   VAL    76      -0.957   9.927   5.751  1.00  0.00
ATOM    173  C   VAL    76      -1.680   9.554   4.828  1.00  0.00
ATOM    174  N   ASN    77      -1.765  10.209   3.671  1.00  0.00
ATOM    175  CA  ASN    77      -0.951  11.410   3.379  1.00  0.00
ATOM    176  CB  ASN    77      -0.814  11.611   1.868  1.00  0.00
ATOM    177  CG  ASN    77       0.066  10.560   1.218  1.00  0.00
ATOM    178  ND2 ASN    77      -0.103  10.371  -0.085  1.00  0.00
ATOM    179  OD1 ASN    77       0.888   9.927   1.882  1.00  0.00
ATOM    180  O   ASN    77      -0.662  13.610   4.290  1.00  0.00
ATOM    181  C   ASN    77      -1.471  12.759   3.910  1.00  0.00
ATOM    182  N   HIS    78      -2.795  12.947   3.940  1.00  0.00
ATOM    183  CA  HIS    78      -3.415  14.202   4.395  1.00  0.00
ATOM    184  CB  HIS    78      -2.977  14.532   5.824  1.00  0.00
ATOM    185  CG  HIS    78      -3.287  13.453   6.814  1.00  0.00
ATOM    186  CD2 HIS    78      -2.505  12.587   7.685  1.00  0.00
ATOM    187  ND1 HIS    78      -4.575  13.050   7.096  1.00  0.00
ATOM    188  CE1 HIS    78      -4.533  12.072   8.020  1.00  0.00
ATOM    189  NE2 HIS    78      -3.295  11.789   8.377  1.00  0.00
ATOM    190  O   HIS    78      -2.547  16.397   3.974  1.00  0.00
ATOM    191  C   HIS    78      -3.024  15.376   3.503  1.00  0.00
ATOM    192  N   ILE    79      -3.220  15.230   2.198  1.00  0.00
ATOM    193  CA  ILE    79      -2.885  16.308   1.267  1.00  0.00
ATOM    194  CB  ILE    79      -3.092  15.874  -0.196  1.00  0.00
ATOM    195  CG1 ILE    79      -2.076  14.796  -0.581  1.00  0.00
ATOM    196  CG2 ILE    79      -2.916  17.059  -1.133  1.00  0.00
ATOM    197  CD1 ILE    79      -2.373  14.121  -1.902  1.00  0.00
ATOM    198  O   ILE    79      -3.231  18.651   1.592  1.00  0.00
ATOM    199  C   ILE    79      -3.749  17.541   1.500  1.00  0.00
ATOM    200  N   ASP    80      -5.062  17.331   1.609  1.00  0.00
ATOM    201  CA  ASP    80      -6.032  18.412   1.873  1.00  0.00
ATOM    202  CB  ASP    80      -7.454  17.851   1.934  1.00  0.00
ATOM    203  CG  ASP    80      -7.980  17.446   0.571  1.00  0.00
ATOM    204  OD1 ASP    80      -7.344  17.805  -0.442  1.00  0.00
ATOM    205  OD2 ASP    80      -9.029  16.771   0.516  1.00  0.00
ATOM    206  O   ASP    80      -6.285  20.318   3.318  1.00  0.00
ATOM    207  C   ASP    80      -5.824  19.180   3.193  1.00  0.00
ATOM    208  N   GLY    81      -5.149  18.566   4.161  1.00  0.00
ATOM    209  CA  GLY    81      -4.863  19.218   5.453  1.00  0.00
ATOM    210  O   GLY    81      -3.989  21.409   5.980  1.00  0.00
ATOM    211  C   GLY    81      -3.918  20.400   5.267  1.00  0.00
ATOM    212  N   ILE    83      -3.026  20.255   4.294  1.00  0.00
ATOM    213  CA  ILE    83      -2.080  21.292   3.924  1.00  0.00
ATOM    214  CB  ILE    83      -0.909  20.721   3.102  1.00  0.00
ATOM    215  CG1 ILE    83      -1.414  20.159   1.773  1.00  0.00
ATOM    216  CG2 ILE    83      -0.216  19.604   3.867  1.00  0.00
ATOM    217  CD1 ILE    83      -0.309  19.743   0.826  1.00  0.00
ATOM    218  O   ILE    83      -2.041  23.402   2.827  1.00  0.00
ATOM    219  C   ILE    83      -2.697  22.400   3.079  1.00  0.00
ATOM    220  N   VAL    84      -3.943  22.231   2.638  1.00  0.00
ATOM    221  CA  VAL    84      -4.619  23.281   1.871  1.00  0.00
ATOM    222  CB  VAL    84      -5.814  22.720   1.078  1.00  0.00
ATOM    223  CG1 VAL    84      -6.553  23.841   0.364  1.00  0.00
ATOM    224  CG2 VAL    84      -5.341  21.717   0.039  1.00  0.00
ATOM    225  O   VAL    84      -5.807  24.041   3.817  1.00  0.00
ATOM    226  C   VAL    84      -5.131  24.355   2.829  1.00  0.00
ATOM    227  N   ASN    85      -4.807  25.619   2.548  1.00  0.00
ATOM    228  CA  ASN    85      -5.187  26.716   3.428  1.00  0.00
ATOM    229  CB  ASN    85      -3.949  27.484   3.893  1.00  0.00
ATOM    230  CG  ASN    85      -3.093  26.684   4.855  1.00  0.00
ATOM    231  ND2 ASN    85      -1.916  26.272   4.396  1.00  0.00
ATOM    232  OD1 ASN    85      -3.486  26.440   5.996  1.00  0.00
ATOM    233  O   ASN    85      -6.730  27.463   1.766  1.00  0.00
ATOM    234  C   ASN    85      -6.111  27.741   2.798  1.00  0.00
ATOM    235  N   GLU    86      -6.203  28.918   3.418  1.00  0.00
ATOM    236  CA  GLU    86      -7.051  30.013   2.928  1.00  0.00
ATOM    237  CB  GLU    86      -6.806  31.285   3.741  1.00  0.00
ATOM    238  CG  GLU    86      -7.664  32.468   3.318  1.00  0.00
ATOM    239  CD  GLU    86      -7.424  33.696   4.173  1.00  0.00
ATOM    240  OE1 GLU    86      -6.612  33.614   5.117  1.00  0.00
ATOM    241  OE2 GLU    86      -8.048  34.742   3.896  1.00  0.00
ATOM    242  O   GLU    86      -7.691  30.329   0.644  1.00  0.00
ATOM    243  C   GLU    86      -6.766  30.333   1.465  1.00  0.00
ATOM    244  N   PRO    87      -5.492  30.597   1.160  1.00  0.00
ATOM    245  CA  PRO    87      -5.021  30.948  -0.189  1.00  0.00
ATOM    246  CB  PRO    87      -3.608  31.488   0.039  1.00  0.00
ATOM    247  CG  PRO    87      -3.134  30.784   1.265  1.00  0.00
ATOM    248  CD  PRO    87      -4.342  30.613   2.143  1.00  0.00
ATOM    249  O   PRO    87      -4.500  29.948  -2.308  1.00  0.00
ATOM    250  C   PRO    87      -4.976  29.781  -1.179  1.00  0.00
ATOM    251  N   SER    88      -5.468  28.615  -0.756  1.00  0.00
ATOM    252  CA  SER    88      -5.498  27.387  -1.567  1.00  0.00
ATOM    253  CB  SER    88      -6.279  27.618  -2.862  1.00  0.00
ATOM    254  OG  SER    88      -7.616  27.997  -2.591  1.00  0.00
ATOM    255  O   SER    88      -3.991  26.240  -3.041  1.00  0.00
ATOM    256  C   SER    88      -4.125  26.860  -1.987  1.00  0.00
ATOM    257  N   GLU    89      -3.123  27.104  -1.148  1.00  0.00
ATOM    258  CA  GLU    89      -1.761  26.667  -1.401  1.00  0.00
ATOM    259  CB  GLU    89      -0.770  27.783  -1.065  1.00  0.00
ATOM    260  CG  GLU    89      -0.870  28.998  -1.973  1.00  0.00
ATOM    261  CD  GLU    89       0.092  30.102  -1.579  1.00  0.00
ATOM    262  OE1 GLU    89       0.819  29.927  -0.578  1.00  0.00
ATOM    263  OE2 GLU    89       0.118  31.141  -2.270  1.00  0.00
ATOM    264  O   GLU    89      -1.623  25.498   0.662  1.00  0.00
ATOM    265  C   GLU    89      -1.434  25.457  -0.550  1.00  0.00
ATOM    266  N   LEU    90      -0.956  24.381  -1.177  1.00  0.00
ATOM    267  CA  LEU    90      -0.514  23.209  -0.449  1.00  0.00
ATOM    268  CB  LEU    90      -0.193  22.066  -1.414  1.00  0.00
ATOM    269  CG  LEU    90      -1.375  21.485  -2.192  1.00  0.00
ATOM    270  CD1 LEU    90      -0.898  20.452  -3.201  1.00  0.00
ATOM    271  CD2 LEU    90      -2.360  20.811  -1.250  1.00  0.00
ATOM    272  O   LEU    90       1.645  24.236  -0.222  1.00  0.00
ATOM    273  C   LEU    90       0.740  23.605   0.329  1.00  0.00
ATOM    274  N   ASN    91       0.775  23.228   1.603  1.00  0.00
ATOM    275  CA  ASN    91       1.883  23.554   2.493  1.00  0.00
ATOM    276  CB  ASN    91       1.497  23.281   3.949  1.00  0.00
ATOM    277  CG  ASN    91       0.487  24.279   4.480  1.00  0.00
ATOM    278  ND2 ASN    91      -0.179  23.920   5.571  1.00  0.00
ATOM    279  OD1 ASN    91       0.310  25.358   3.915  1.00  0.00
ATOM    280  O   ASN    91       3.014  21.668   1.556  1.00  0.00
ATOM    281  C   ASN    91       3.114  22.723   2.171  1.00  0.00
ATOM    282  N   GLN    92       4.278  23.207   2.596  1.00  0.00
ATOM    283  CA  GLN    92       5.544  22.516   2.354  1.00  0.00
ATOM    284  CB  GLN    92       6.720  23.358   2.856  1.00  0.00
ATOM    285  CG  GLN    92       6.990  24.601   2.025  1.00  0.00
ATOM    286  CD  GLN    92       8.109  25.451   2.595  1.00  0.00
ATOM    287  OE1 GLN    92       8.669  25.134   3.644  1.00  0.00
ATOM    288  NE2 GLN    92       8.440  26.534   1.901  1.00  0.00
ATOM    289  O   GLN    92       6.358  20.207   2.571  1.00  0.00
ATOM    290  C   GLN    92       5.644  21.149   3.060  1.00  0.00
ATOM    291  N   GLU    93       4.920  21.049   4.197  1.00  0.00
ATOM    292  CA  GLU    93       4.912  19.814   4.975  1.00  0.00
ATOM    293  CB  GLU    93       4.300  20.054   6.357  1.00  0.00
ATOM    294  CG  GLU    93       5.163  20.900   7.279  1.00  0.00
ATOM    295  CD  GLU    93       4.473  21.220   8.591  1.00  0.00
ATOM    296  OE1 GLU    93       3.293  20.841   8.750  1.00  0.00
ATOM    297  OE2 GLU    93       5.112  21.849   9.460  1.00  0.00
ATOM    298  O   GLU    93       4.547  17.558   4.258  1.00  0.00
ATOM    299  C   GLU    93       4.098  18.706   4.297  1.00  0.00
ATOM    300  N   GLU    94       2.918  19.064   3.774  1.00  0.00
ATOM    301  CA  GLU    94       2.020  18.121   3.096  1.00  0.00
ATOM    302  CB  GLU    94       0.678  18.788   2.784  1.00  0.00
ATOM    303  CG  GLU    94      -0.143  19.136   4.017  1.00  0.00
ATOM    304  CD  GLU    94      -0.674  17.908   4.728  1.00  0.00
ATOM    305  OE1 GLU    94      -0.565  16.799   4.161  1.00  0.00
ATOM    306  OE2 GLU    94      -1.199  18.053   5.851  1.00  0.00
ATOM    307  O   GLU    94       2.465  16.468   1.421  1.00  0.00
ATOM    308  C   GLU    94       2.622  17.642   1.794  1.00  0.00
ATOM    309  N   VAL    95       3.310  18.556   1.107  1.00  0.00
ATOM    310  CA  VAL    95       3.957  18.214  -0.157  1.00  0.00
ATOM    311  CB  VAL    95       4.527  19.463  -0.855  1.00  0.00
ATOM    312  CG1 VAL    95       5.356  19.064  -2.068  1.00  0.00
ATOM    313  CG2 VAL    95       3.403  20.375  -1.320  1.00  0.00
ATOM    314  O   VAL    95       5.300  16.265  -0.648  1.00  0.00
ATOM    315  C   VAL    95       5.125  17.220   0.109  1.00  0.00
ATOM    316  N   GLU    96       5.907  17.462   1.190  1.00  0.00
ATOM    317  CA  GLU    96       7.018  16.560   1.629  1.00  0.00
ATOM    318  CB  GLU    96       7.688  17.109   2.890  1.00  0.00
ATOM    319  CG  GLU    96       8.862  16.279   3.382  1.00  0.00
ATOM    320  CD  GLU    96       9.521  16.871   4.611  1.00  0.00
ATOM    321  OE1 GLU    96       9.069  17.941   5.070  1.00  0.00
ATOM    322  OE2 GLU    96      10.491  16.267   5.116  1.00  0.00
ATOM    323  O   GLU    96       7.042  14.132   1.452  1.00  0.00
ATOM    324  C   GLU    96       6.492  15.145   1.944  1.00  0.00
ATOM    325  N   THR    97       5.428  15.089   2.753  1.00  0.00
ATOM    326  CA  THR    97       4.679  13.839   3.013  1.00  0.00
ATOM    327  CB  THR    97       3.399  14.106   3.827  1.00  0.00
ATOM    328  CG2 THR    97       2.637  12.812   4.061  1.00  0.00
ATOM    329  OG1 THR    97       3.747  14.677   5.095  1.00  0.00
ATOM    330  O   THR    97       4.386  11.869   1.684  1.00  0.00
ATOM    331  C   THR    97       4.223  13.100   1.748  1.00  0.00
ATOM    332  N   LEU    98       3.654  13.830   0.764  1.00  0.00
ATOM    333  CA  LEU    98       3.146  13.220  -0.475  1.00  0.00
ATOM    334  CB  LEU    98       2.354  14.243  -1.292  1.00  0.00
ATOM    335  CG  LEU    98       1.741  13.739  -2.598  1.00  0.00
ATOM    336  CD1 LEU    98       0.755  12.612  -2.330  1.00  0.00
ATOM    337  CD2 LEU    98       0.999  14.859  -3.312  1.00  0.00
ATOM    338  O   LEU    98       4.169  11.656  -2.000  1.00  0.00
ATOM    339  C   LEU    98       4.286  12.701  -1.350  1.00  0.00
ATOM    340  N   ALA    99       5.399  13.438  -1.371  1.00  0.00
ATOM    341  CA  ALA    99       6.579  13.034  -2.146  1.00  0.00
ATOM    342  CB  ALA    99       7.633  14.133  -2.117  1.00  0.00
ATOM    343  O   ALA    99       7.708  10.902  -2.280  1.00  0.00
ATOM    344  C   ALA    99       7.189  11.759  -1.556  1.00  0.00
ATOM    345  N   ARG   100       7.111  11.636  -0.230  1.00  0.00
ATOM    346  CA  ARG   100       7.669  10.464   0.449  1.00  0.00
ATOM    347  CB  ARG   100       7.628  10.652   1.966  1.00  0.00
ATOM    348  CG  ARG   100       8.611  11.689   2.489  1.00  0.00
ATOM    349  CD  ARG   100       8.461  11.885   3.988  1.00  0.00
ATOM    350  NE  ARG   100       9.391  12.885   4.506  1.00  0.00
ATOM    351  CZ  ARG   100       9.381  13.340   5.755  1.00  0.00
ATOM    352  NH1 ARG   100      10.266  14.250   6.136  1.00  0.00
ATOM    353  NH2 ARG   100       8.485  12.884   6.619  1.00  0.00
ATOM    354  O   ARG   100       7.498   8.092   0.030  1.00  0.00
ATOM    355  C   ARG   100       6.879   9.194   0.108  1.00  0.00
ATOM    356  N   PRO   101       5.536   9.377  -0.112  1.00  0.00
ATOM    357  CA  PRO   101       4.648   8.267  -0.447  1.00  0.00
ATOM    358  CB  PRO   101       3.246   8.820  -0.180  1.00  0.00
ATOM    359  CG  PRO   101       3.471   9.991   0.717  1.00  0.00
ATOM    360  CD  PRO   101       4.817  10.548   0.347  1.00  0.00
ATOM    361  O   PRO   101       4.841   6.656  -2.241  1.00  0.00
ATOM    362  C   PRO   101       4.826   7.859  -1.915  1.00  0.00
ATOM    363  N   CYS   102       4.963   8.842  -2.808  1.00  0.00
ATOM    364  CA  CYS   102       5.166   8.510  -4.213  1.00  0.00
ATOM    365  CB  CYS   102       5.169   9.780  -5.067  1.00  0.00
ATOM    366  SG  CYS   102       3.564  10.604  -5.186  1.00  0.00
ATOM    367  O   CYS   102       6.603   6.982  -5.372  1.00  0.00
ATOM    368  C   CYS   102       6.493   7.793  -4.453  1.00  0.00
ATOM    369  N   LEU   103       7.501   8.080  -3.627  1.00  0.00
ATOM    370  CA  LEU   103       8.749   7.352  -3.742  1.00  0.00
ATOM    371  CB  LEU   103       9.821   7.985  -2.853  1.00  0.00
ATOM    372  CG  LEU   103      10.308   9.376  -3.263  1.00  0.00
ATOM    373  CD1 LEU   103      11.252   9.946  -2.215  1.00  0.00
ATOM    374  CD2 LEU   103      11.051   9.316  -4.588  1.00  0.00
ATOM    375  O   LEU   103       9.152   4.991  -3.831  1.00  0.00
ATOM    376  C   LEU   103       8.525   5.912  -3.308  1.00  0.00
ATOM    377  N   ASN   104       7.642   5.719  -2.332  1.00  0.00
ATOM    378  CA  ASN   104       7.383   4.385  -1.813  1.00  0.00
ATOM    379  CB  ASN   104       6.624   4.464  -0.486  1.00  0.00
ATOM    380  CG  ASN   104       7.500   4.941   0.656  1.00  0.00
ATOM    381  ND2 ASN   104       6.870   5.447   1.711  1.00  0.00
ATOM    382  OD1 ASN   104       8.726   4.855   0.590  1.00  0.00
ATOM    383  O   ASN   104       6.734   2.466  -3.067  1.00  0.00
ATOM    384  C   ASN   104       6.547   3.655  -2.848  1.00  0.00
ATOM    385  N   MET   105       5.629   4.392  -3.473  1.00  0.00
ATOM    386  CA  MET   105       4.790   3.864  -4.535  1.00  0.00
ATOM    387  CB  MET   105       3.744   4.897  -4.956  1.00  0.00
ATOM    388  CG  MET   105       2.665   5.149  -3.915  1.00  0.00
ATOM    389  SD  MET   105       1.320   6.174  -4.537  1.00  0.00
ATOM    390  CE  MET   105       2.098   7.788  -4.540  1.00  0.00
ATOM    391  O   MET   105       5.494   2.483  -6.365  1.00  0.00
ATOM    392  C   MET   105       5.681   3.520  -5.739  1.00  0.00
ATOM    393  N   LEU   106       6.655   4.387  -6.059  1.00  0.00
ATOM    394  CA  LEU   106       7.558   4.100  -7.180  1.00  0.00
ATOM    395  CB  LEU   106       8.487   5.287  -7.438  1.00  0.00
ATOM    396  CG  LEU   106       7.827   6.561  -7.972  1.00  0.00
ATOM    397  CD1 LEU   106       8.831   7.701  -8.034  1.00  0.00
ATOM    398  CD2 LEU   106       7.277   6.333  -9.373  1.00  0.00
ATOM    399  O   LEU   106       8.781   2.108  -7.782  1.00  0.00
ATOM    400  C   LEU   106       8.424   2.863  -6.873  1.00  0.00
ATOM    401  N   ASN   107       8.756   2.659  -5.597  1.00  0.00
ATOM    402  CA  ASN   107       9.526   1.484  -5.177  1.00  0.00
ATOM    403  CB  ASN   107       9.756   1.507  -3.663  1.00  0.00
ATOM    404  CG  ASN   107      10.772   2.552  -3.245  1.00  0.00
ATOM    405  ND2 ASN   107      10.747   2.921  -1.970  1.00  0.00
ATOM    406  OD1 ASN   107      11.567   3.021  -4.061  1.00  0.00
ATOM    407  O   ASN   107       9.389  -0.754  -6.092  1.00  0.00
ATOM    408  C   ASN   107       8.790   0.181  -5.525  1.00  0.00
ATOM    409  N   ARG   108       7.486   0.155  -5.189  1.00  0.00
ATOM    410  CA  ARG   108       6.595  -0.981  -5.464  1.00  0.00
ATOM    411  CB  ARG   108       5.211  -0.735  -4.857  1.00  0.00
ATOM    412  CG  ARG   108       5.182  -0.777  -3.338  1.00  0.00
ATOM    413  CD  ARG   108       3.778  -0.548  -2.806  1.00  0.00
ATOM    414  NE  ARG   108       3.742  -0.529  -1.346  1.00  0.00
ATOM    415  CZ  ARG   108       3.677  -1.619  -0.587  1.00  0.00
ATOM    416  NH1 ARG   108       3.648  -1.506   0.734  1.00  0.00
ATOM    417  NH2 ARG   108       3.642  -2.819  -1.150  1.00  0.00
ATOM    418  O   ARG   108       6.268  -2.339  -7.434  1.00  0.00
ATOM    419  C   ARG   108       6.417  -1.201  -6.969  1.00  0.00
ATOM    420  N   LEU   109       6.436  -0.100  -7.709  1.00  0.00
ATOM    421  CA  LEU   109       6.219  -0.093  -9.162  1.00  0.00
ATOM    422  CB  LEU   109       5.456   1.164  -9.583  1.00  0.00
ATOM    423  CG  LEU   109       4.080   1.367  -8.947  1.00  0.00
ATOM    424  CD1 LEU   109       3.464   2.681  -9.404  1.00  0.00
ATOM    425  CD2 LEU   109       3.136   0.239  -9.336  1.00  0.00
ATOM    426  O   LEU   109       7.486   0.168 -11.184  1.00  0.00
ATOM    427  C   LEU   109       7.519  -0.116  -9.991  1.00  0.00
TER
END



