13th Community Wide Experiment on the
Critical Assessment of Techniques for Protein Structure Prediction
Refined vs starting models comparison. Model: R0977-D2TS086_1
Green line: distance between the aligned CA atoms in the starting model and the experimental structure in the LGA sequence-independent superposition under the 4A distance cutoff (see LGA description).
Blue line: distance between the corresponding CA atoms in a refined model and the experimental structure in the LGA sequence-independent superposition under the 4A distance cutoff.
Red line = (blue line) - (green thick line): difference between the corresponding Refined Model-Target and Starting Model-Target CA-CA distances (see above). Negative values show regions where the reifned model has better fit to the target than the starting model, i.e. areas of potential improvement.
The plot above is generated applying the moving average method with window of 3 positions.
Protein Structure Prediction Center
Sponsored by the US National Institute of General Medical Sciences (NIH/NIGMS)
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