####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 69 ( 276), selected 69 , name R0974s1TS433_1 # Molecule2: number of CA atoms 69 ( 556), selected 69 , name R0974s1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 69 2 - 70 2.16 2.16 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 2 - 68 1.71 2.21 LCS_AVERAGE: 95.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 52 7 - 58 0.98 2.22 LCS_AVERAGE: 62.82 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 69 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 2 S 2 8 67 69 3 11 36 56 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Y 3 Y 3 32 67 69 3 33 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT D 4 D 4 32 67 69 10 33 48 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Y 5 Y 5 32 67 69 3 31 46 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT S 6 S 6 32 67 69 10 16 38 51 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT S 7 S 7 52 67 69 10 27 45 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 8 L 8 52 67 69 10 27 48 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 9 L 9 52 67 69 10 33 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT G 10 G 10 52 67 69 11 33 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 11 K 11 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT I 12 I 12 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT T 13 T 13 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT E 14 E 14 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 15 K 15 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT C 16 C 16 52 67 69 14 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT G 17 G 17 52 67 69 11 39 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT T 18 T 18 52 67 69 7 40 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Q 19 Q 19 52 67 69 11 40 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Y 20 Y 20 52 67 69 13 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT N 21 N 21 52 67 69 13 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT F 22 F 22 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT A 23 A 23 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT I 24 I 24 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT A 25 A 25 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT M 26 M 26 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT G 27 G 27 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 28 L 28 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT S 29 S 29 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT E 30 E 30 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT R 31 R 31 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT T 32 T 32 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT V 33 V 33 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT S 34 S 34 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 35 L 35 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 36 K 36 52 67 69 16 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 37 L 37 52 67 69 16 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT N 38 N 38 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT D 39 D 39 52 67 69 6 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 40 K 40 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT V 41 V 41 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT T 42 T 42 52 67 69 5 38 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT W 43 W 43 52 67 69 10 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 44 K 44 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT D 45 D 45 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT D 46 D 46 52 67 69 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT E 47 E 47 52 67 69 16 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT I 48 I 48 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 49 L 49 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 50 K 50 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT A 51 A 51 52 67 69 14 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT V 52 V 52 52 67 69 8 36 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT H 53 H 53 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT V 54 V 54 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 55 L 55 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT E 56 E 56 52 67 69 15 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT L 57 L 57 52 67 69 11 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT N 58 N 58 52 67 69 5 12 44 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT P 59 P 59 49 67 69 5 8 18 46 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Q 60 Q 60 13 67 69 5 8 17 34 56 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT D 61 D 61 13 67 69 4 11 37 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT I 62 I 62 13 67 69 4 26 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT P 63 P 63 13 67 69 4 14 43 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT K 64 K 64 10 67 69 4 7 11 52 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT Y 65 Y 65 10 67 69 4 7 11 13 40 62 64 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT F 66 F 66 10 67 69 3 6 11 13 40 55 62 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT F 67 F 67 7 67 69 3 5 10 13 40 55 63 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT N 68 N 68 7 67 69 3 5 11 13 16 46 62 66 67 67 68 69 69 69 69 69 69 69 69 69 LCS_GDT A 69 A 69 3 63 69 3 3 4 4 4 8 9 12 19 25 28 69 69 69 69 69 69 69 69 69 LCS_GDT K 70 K 70 3 3 69 0 3 3 3 3 13 20 53 59 67 68 69 69 69 69 69 69 69 69 69 LCS_AVERAGE LCS_A: 86.17 ( 62.82 95.67 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 20 42 49 58 61 63 64 66 67 67 68 69 69 69 69 69 69 69 69 69 GDT PERCENT_AT 28.99 60.87 71.01 84.06 88.41 91.30 92.75 95.65 97.10 97.10 98.55 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.70 0.82 1.15 1.29 1.40 1.45 1.61 1.71 1.71 1.91 2.16 2.16 2.16 2.16 2.16 2.16 2.16 2.16 2.16 GDT RMS_ALL_AT 2.38 2.25 2.24 2.25 2.27 2.26 2.25 2.23 2.21 2.21 2.18 2.16 2.16 2.16 2.16 2.16 2.16 2.16 2.16 2.16 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 2 S 2 2.466 2 0.106 0.106 2.976 49.091 32.727 - LGA Y 3 Y 3 1.231 8 0.063 0.063 1.961 58.182 19.394 - LGA D 4 D 4 1.572 4 0.059 0.059 1.626 58.182 29.091 - LGA Y 5 Y 5 2.150 8 0.036 0.036 2.525 38.636 12.879 - LGA S 6 S 6 2.780 2 0.140 0.140 2.780 32.727 21.818 - LGA S 7 S 7 2.110 2 0.124 0.124 2.434 44.545 29.697 - LGA L 8 L 8 1.673 4 0.065 0.065 1.976 58.182 29.091 - LGA L 9 L 9 1.465 4 0.014 0.014 1.619 65.909 32.955 - LGA G 10 G 10 1.304 0 0.028 0.028 1.347 69.545 69.545 - LGA K 11 K 11 0.711 5 0.042 0.042 0.837 81.818 36.364 - LGA I 12 I 12 0.780 4 0.019 0.019 0.897 81.818 40.909 - LGA T 13 T 13 0.748 3 0.018 0.018 0.959 81.818 46.753 - LGA E 14 E 14 0.840 5 0.058 0.058 0.925 81.818 36.364 - LGA K 15 K 15 1.021 5 0.175 0.175 1.021 77.727 34.545 - LGA C 16 C 16 1.032 2 0.076 0.076 1.138 65.455 43.636 - LGA G 17 G 17 1.038 0 0.401 0.401 2.135 58.636 58.636 - LGA T 18 T 18 0.763 3 0.052 0.052 0.764 81.818 46.753 - LGA Q 19 Q 19 0.957 5 0.030 0.030 0.957 81.818 36.364 - LGA Y 20 Y 20 0.644 8 0.013 0.013 0.733 81.818 27.273 - LGA N 21 N 21 0.710 4 0.026 0.026 0.732 81.818 40.909 - LGA F 22 F 22 0.680 7 0.072 0.072 0.809 81.818 29.752 - LGA A 23 A 23 0.767 1 0.034 0.034 0.767 81.818 65.455 - LGA I 24 I 24 0.510 4 0.021 0.021 0.588 81.818 40.909 - LGA A 25 A 25 0.730 1 0.021 0.021 0.852 81.818 65.455 - LGA M 26 M 26 0.940 4 0.083 0.083 0.940 81.818 40.909 - LGA G 27 G 27 0.526 0 0.022 0.022 0.663 90.909 90.909 - LGA L 28 L 28 0.504 4 0.025 0.025 0.531 86.364 43.182 - LGA S 29 S 29 0.667 2 0.011 0.011 0.744 81.818 54.545 - LGA E 30 E 30 0.884 5 0.034 0.034 1.088 77.727 34.545 - LGA R 31 R 31 1.036 7 0.041 0.041 1.086 69.545 25.289 - LGA T 32 T 32 0.999 3 0.039 0.039 1.138 77.727 44.416 - LGA V 33 V 33 0.911 3 0.048 0.048 0.965 81.818 46.753 - LGA S 34 S 34 1.163 2 0.028 0.028 1.237 69.545 46.364 - LGA L 35 L 35 1.175 4 0.047 0.047 1.421 65.455 32.727 - LGA K 36 K 36 0.896 5 0.081 0.081 1.378 73.636 32.727 - LGA L 37 L 37 1.065 4 0.076 0.076 1.316 69.545 34.773 - LGA N 38 N 38 1.496 4 0.028 0.028 1.804 58.182 29.091 - LGA D 39 D 39 1.636 4 0.020 0.020 1.669 50.909 25.455 - LGA K 40 K 40 1.550 5 0.036 0.036 1.695 50.909 22.626 - LGA V 41 V 41 1.527 3 0.129 0.129 1.708 54.545 31.169 - LGA T 42 T 42 1.799 3 0.052 0.052 1.799 58.182 33.247 - LGA W 43 W 43 1.171 10 0.042 0.042 1.427 65.455 18.701 - LGA K 44 K 44 1.072 5 0.039 0.039 1.072 69.545 30.909 - LGA D 45 D 45 1.213 4 0.137 0.137 1.213 65.455 32.727 - LGA D 46 D 46 0.901 4 0.053 0.053 0.908 81.818 40.909 - LGA E 47 E 47 0.503 5 0.013 0.013 0.537 90.909 40.404 - LGA I 48 I 48 0.494 4 0.087 0.087 0.568 90.909 45.455 - LGA L 49 L 49 0.746 4 0.042 0.042 0.901 81.818 40.909 - LGA K 50 K 50 0.342 5 0.026 0.026 0.400 100.000 44.444 - LGA A 51 A 51 0.630 1 0.054 0.054 1.097 82.273 65.818 - LGA V 52 V 52 1.313 3 0.041 0.041 1.313 69.545 39.740 - LGA H 53 H 53 0.676 6 0.076 0.076 0.911 81.818 32.727 - LGA V 54 V 54 0.610 3 0.038 0.038 0.708 81.818 46.753 - LGA L 55 L 55 0.557 4 0.058 0.058 0.650 81.818 40.909 - LGA E 56 E 56 0.928 5 0.027 0.027 0.928 81.818 36.364 - LGA L 57 L 57 0.393 4 0.047 0.047 1.243 82.273 41.136 - LGA N 58 N 58 1.942 4 0.106 0.106 2.186 48.182 24.091 - LGA P 59 P 59 3.064 3 0.048 0.048 3.561 18.636 10.649 - LGA Q 60 Q 60 3.983 5 0.080 0.080 3.983 14.545 6.465 - LGA D 61 D 61 2.256 4 0.029 0.029 2.781 49.091 24.545 - LGA I 62 I 62 1.561 4 0.057 0.057 1.561 58.182 29.091 - LGA P 63 P 63 2.275 3 0.049 0.049 2.275 55.909 31.948 - LGA K 64 K 64 2.830 5 0.172 0.172 3.793 29.091 12.929 - LGA Y 65 Y 65 3.302 8 0.048 0.048 5.104 16.818 5.606 - LGA F 66 F 66 4.181 7 0.175 0.175 5.769 6.364 2.314 - LGA F 67 F 67 4.008 7 0.241 0.241 4.008 9.545 3.471 - LGA N 68 N 68 5.166 4 0.581 0.581 8.225 1.364 0.682 - LGA A 69 A 69 9.416 1 0.616 0.616 9.416 0.000 0.000 - LGA K 70 K 70 7.629 5 0.527 0.527 9.645 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 69 276 276 100.00 556 276 49.64 69 0 SUMMARY(RMSD_GDC): 2.165 2.187 2.187 63.366 33.996 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 69 69 4.0 66 1.61 85.145 90.286 3.862 LGA_LOCAL RMSD: 1.609 Number of atoms: 66 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.234 Number of assigned atoms: 69 Std_ASGN_ATOMS RMSD: 2.165 Standard rmsd on all 69 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.957037 * X + 0.289537 * Y + -0.015749 * Z + -2.372190 Y_new = 0.199165 * X + -0.616905 * Y + 0.761421 * Z + 31.862486 Z_new = 0.210744 * X + -0.731845 * Y + -0.648067 * Z + -1.293423 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.205177 -0.212336 -2.295556 [DEG: 11.7558 -12.1659 -131.5257 ] ZXZ: -3.120912 2.275840 2.861216 [DEG: -178.8151 130.3960 163.9356 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0974s1TS433_1 REMARK 2: R0974s1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0974s1TS433_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 69 69 4.0 66 1.61 90.286 2.16 REMARK ---------------------------------------------------------- MOLECULE R0974s1TS433_1 PFRMAT TS TARGET R0974s1 MODEL 1 PARENT N/A ATOM 20 N SER 2 -2.372 31.862 -1.293 1.00 0.00 ATOM 21 CA SER 2 -3.678 32.055 -0.673 1.00 0.00 ATOM 22 C SER 2 -3.593 31.608 0.773 1.00 0.00 ATOM 23 O SER 2 -2.845 30.681 1.088 1.00 0.00 ATOM 31 N TYR 3 -4.366 32.243 1.639 1.00 0.00 ATOM 32 CA TYR 3 -4.391 31.894 3.052 1.00 0.00 ATOM 33 C TYR 3 -5.318 30.734 3.343 1.00 0.00 ATOM 34 O TYR 3 -6.325 30.559 2.662 1.00 0.00 ATOM 52 N ASP 4 -4.947 29.939 4.343 1.00 0.00 ATOM 53 CA ASP 4 -5.757 28.847 4.873 1.00 0.00 ATOM 54 C ASP 4 -5.516 28.748 6.364 1.00 0.00 ATOM 55 O ASP 4 -4.529 28.157 6.798 1.00 0.00 ATOM 64 N TYR 5 -6.458 29.245 7.140 1.00 0.00 ATOM 65 CA TYR 5 -6.323 29.340 8.586 1.00 0.00 ATOM 66 C TYR 5 -7.006 28.194 9.335 1.00 0.00 ATOM 67 O TYR 5 -7.171 28.235 10.570 1.00 0.00 ATOM 85 N SER 6 -7.379 27.160 8.590 1.00 0.00 ATOM 86 CA SER 6 -8.088 26.020 9.135 1.00 0.00 ATOM 87 C SER 6 -7.297 25.241 10.185 1.00 0.00 ATOM 88 O SER 6 -7.910 24.597 11.035 1.00 0.00 ATOM 96 N SER 7 -5.954 25.292 10.170 1.00 0.00 ATOM 97 CA SER 7 -5.180 24.566 11.170 1.00 0.00 ATOM 98 C SER 7 -5.298 25.213 12.531 1.00 0.00 ATOM 99 O SER 7 -5.062 24.564 13.565 1.00 0.00 ATOM 107 N LEU 8 -5.681 26.492 12.572 1.00 0.00 ATOM 108 CA LEU 8 -5.773 27.108 13.860 1.00 0.00 ATOM 109 C LEU 8 -7.090 26.606 14.427 1.00 0.00 ATOM 110 O LEU 8 -7.164 26.234 15.596 1.00 0.00 ATOM 126 N LEU 9 -8.108 26.500 13.550 1.00 0.00 ATOM 127 CA LEU 9 -9.430 26.016 13.959 1.00 0.00 ATOM 128 C LEU 9 -9.360 24.583 14.446 1.00 0.00 ATOM 129 O LEU 9 -10.080 24.181 15.368 1.00 0.00 ATOM 145 N GLY 10 -8.519 23.798 13.799 1.00 0.00 ATOM 146 CA GLY 10 -8.358 22.404 14.150 1.00 0.00 ATOM 147 C GLY 10 -7.940 22.263 15.614 1.00 0.00 ATOM 148 O GLY 10 -8.577 21.543 16.397 1.00 0.00 ATOM 152 N LYS 11 -6.919 23.021 16.016 1.00 0.00 ATOM 153 CA LYS 11 -6.468 22.929 17.402 1.00 0.00 ATOM 154 C LYS 11 -7.506 23.547 18.360 1.00 0.00 ATOM 155 O LYS 11 -7.642 23.092 19.500 1.00 0.00 ATOM 174 N ILE 12 -8.225 24.580 17.913 1.00 0.00 ATOM 175 CA ILE 12 -9.270 25.219 18.720 1.00 0.00 ATOM 176 C ILE 12 -10.330 24.202 19.062 1.00 0.00 ATOM 177 O ILE 12 -10.756 24.102 20.215 1.00 0.00 ATOM 193 N THR 13 -10.732 23.400 18.083 1.00 0.00 ATOM 194 CA THR 13 -11.730 22.386 18.359 1.00 0.00 ATOM 195 C THR 13 -11.244 21.470 19.491 1.00 0.00 ATOM 196 O THR 13 -12.015 21.179 20.409 1.00 0.00 ATOM 207 N GLU 14 -9.977 21.032 19.450 1.00 0.00 ATOM 208 CA GLU 14 -9.458 20.152 20.504 1.00 0.00 ATOM 209 C GLU 14 -9.250 20.811 21.893 1.00 0.00 ATOM 210 O GLU 14 -9.489 20.173 22.923 1.00 0.00 ATOM 222 N LYS 15 -8.798 22.073 21.928 1.00 0.00 ATOM 223 CA LYS 15 -8.474 22.763 23.190 1.00 0.00 ATOM 224 C LYS 15 -9.523 23.702 23.783 1.00 0.00 ATOM 225 O LYS 15 -9.488 23.987 24.981 1.00 0.00 ATOM 244 N CYS 16 -10.402 24.237 22.961 1.00 0.00 ATOM 245 CA CYS 16 -11.389 25.209 23.417 1.00 0.00 ATOM 246 C CYS 16 -12.813 24.695 23.173 1.00 0.00 ATOM 247 O CYS 16 -13.730 24.903 23.981 1.00 0.00 ATOM 255 N GLY 17 -12.996 24.063 22.011 1.00 0.00 ATOM 256 CA GLY 17 -14.262 23.504 21.548 1.00 0.00 ATOM 257 C GLY 17 -15.050 24.471 20.679 1.00 0.00 ATOM 258 O GLY 17 -16.019 24.093 20.015 1.00 0.00 ATOM 262 N THR 18 -14.638 25.725 20.708 1.00 0.00 ATOM 263 CA THR 18 -15.274 26.788 19.968 1.00 0.00 ATOM 264 C THR 18 -14.404 28.018 19.859 1.00 0.00 ATOM 265 O THR 18 -13.639 28.347 20.787 1.00 0.00 ATOM 276 N GLN 19 -14.625 28.758 18.773 1.00 0.00 ATOM 277 CA GLN 19 -13.944 30.011 18.509 1.00 0.00 ATOM 278 C GLN 19 -14.205 30.976 19.631 1.00 0.00 ATOM 279 O GLN 19 -13.340 31.764 19.988 1.00 0.00 ATOM 293 N TYR 20 -15.363 30.841 20.256 1.00 0.00 ATOM 294 CA TYR 20 -15.750 31.681 21.364 1.00 0.00 ATOM 295 C TYR 20 -14.765 31.659 22.528 1.00 0.00 ATOM 296 O TYR 20 -14.471 32.718 23.088 1.00 0.00 ATOM 314 N ASN 21 -14.335 30.469 22.947 1.00 0.00 ATOM 315 CA ASN 21 -13.486 30.335 24.125 1.00 0.00 ATOM 316 C ASN 21 -12.078 30.747 23.785 1.00 0.00 ATOM 317 O ASN 21 -11.368 31.385 24.574 1.00 0.00 ATOM 328 N PHE 22 -11.704 30.445 22.558 1.00 0.00 ATOM 329 CA PHE 22 -10.407 30.812 22.053 1.00 0.00 ATOM 330 C PHE 22 -10.332 32.329 22.049 1.00 0.00 ATOM 331 O PHE 22 -9.450 32.939 22.661 1.00 0.00 ATOM 348 N ALA 23 -11.359 32.948 21.477 1.00 0.00 ATOM 349 CA ALA 23 -11.421 34.380 21.379 1.00 0.00 ATOM 350 C ALA 23 -11.339 35.019 22.753 1.00 0.00 ATOM 351 O ALA 23 -10.474 35.868 22.981 1.00 0.00 ATOM 358 N ILE 24 -12.048 34.470 23.744 1.00 0.00 ATOM 359 CA ILE 24 -11.974 35.056 25.072 1.00 0.00 ATOM 360 C ILE 24 -10.564 34.999 25.603 1.00 0.00 ATOM 361 O ILE 24 -10.050 35.993 26.114 1.00 0.00 ATOM 377 N ALA 25 -9.914 33.852 25.454 1.00 0.00 ATOM 378 CA ALA 25 -8.563 33.687 25.958 1.00 0.00 ATOM 379 C ALA 25 -7.590 34.695 25.328 1.00 0.00 ATOM 380 O ALA 25 -6.646 35.149 25.981 1.00 0.00 ATOM 387 N MET 26 -7.818 35.045 24.060 1.00 0.00 ATOM 388 CA MET 26 -6.972 35.989 23.340 1.00 0.00 ATOM 389 C MET 26 -7.375 37.455 23.491 1.00 0.00 ATOM 390 O MET 26 -6.747 38.335 22.891 1.00 0.00 ATOM 404 N GLY 27 -8.477 37.733 24.181 1.00 0.00 ATOM 405 CA GLY 27 -8.960 39.103 24.272 1.00 0.00 ATOM 406 C GLY 27 -9.674 39.580 22.992 1.00 0.00 ATOM 407 O GLY 27 -9.724 40.782 22.717 1.00 0.00 ATOM 411 N LEU 28 -10.181 38.644 22.184 1.00 0.00 ATOM 412 CA LEU 28 -10.851 38.959 20.926 1.00 0.00 ATOM 413 C LEU 28 -12.335 38.623 21.000 1.00 0.00 ATOM 414 O LEU 28 -12.747 37.768 21.773 1.00 0.00 ATOM 430 N SER 29 -13.154 39.247 20.165 1.00 0.00 ATOM 431 CA SER 29 -14.548 38.795 20.099 1.00 0.00 ATOM 432 C SER 29 -14.614 37.517 19.254 1.00 0.00 ATOM 433 O SER 29 -13.720 37.292 18.429 1.00 0.00 ATOM 441 N GLU 30 -15.692 36.723 19.387 1.00 0.00 ATOM 442 CA GLU 30 -15.805 35.467 18.634 1.00 0.00 ATOM 443 C GLU 30 -15.906 35.673 17.128 1.00 0.00 ATOM 444 O GLU 30 -15.493 34.807 16.352 1.00 0.00 ATOM 456 N ARG 31 -16.397 36.845 16.724 1.00 0.00 ATOM 457 CA ARG 31 -16.523 37.209 15.327 1.00 0.00 ATOM 458 C ARG 31 -15.153 37.476 14.744 1.00 0.00 ATOM 459 O ARG 31 -14.918 37.226 13.558 1.00 0.00 ATOM 480 N THR 32 -14.276 38.044 15.570 1.00 0.00 ATOM 481 CA THR 32 -12.954 38.446 15.155 1.00 0.00 ATOM 482 C THR 32 -12.201 37.198 14.803 1.00 0.00 ATOM 483 O THR 32 -11.542 37.129 13.761 1.00 0.00 ATOM 494 N VAL 33 -12.334 36.188 15.661 1.00 0.00 ATOM 495 CA VAL 33 -11.650 34.944 15.406 1.00 0.00 ATOM 496 C VAL 33 -12.220 34.245 14.207 1.00 0.00 ATOM 497 O VAL 33 -11.475 33.898 13.293 1.00 0.00 ATOM 510 N SER 34 -13.536 34.147 14.119 1.00 0.00 ATOM 511 CA SER 34 -14.100 33.412 13.012 1.00 0.00 ATOM 512 C SER 34 -13.620 33.969 11.685 1.00 0.00 ATOM 513 O SER 34 -13.143 33.218 10.834 1.00 0.00 ATOM 521 N LEU 35 -13.623 35.282 11.512 1.00 0.00 ATOM 522 CA LEU 35 -13.191 35.814 10.233 1.00 0.00 ATOM 523 C LEU 35 -11.701 35.538 9.987 1.00 0.00 ATOM 524 O LEU 35 -11.297 35.221 8.849 1.00 0.00 ATOM 540 N LYS 36 -10.885 35.611 11.052 1.00 0.00 ATOM 541 CA LYS 36 -9.449 35.369 10.955 1.00 0.00 ATOM 542 C LYS 36 -9.118 33.899 10.690 1.00 0.00 ATOM 543 O LYS 36 -8.079 33.607 10.107 1.00 0.00 ATOM 562 N LEU 37 -9.972 32.957 11.118 1.00 0.00 ATOM 563 CA LEU 37 -9.686 31.555 10.812 1.00 0.00 ATOM 564 C LEU 37 -10.557 30.945 9.695 1.00 0.00 ATOM 565 O LEU 37 -10.297 29.824 9.265 1.00 0.00 ATOM 581 N ASN 38 -11.517 31.713 9.152 1.00 0.00 ATOM 582 CA ASN 38 -12.359 31.273 8.034 1.00 0.00 ATOM 583 C ASN 38 -11.902 31.881 6.714 1.00 0.00 ATOM 584 O ASN 38 -12.653 31.885 5.729 1.00 0.00 ATOM 595 N ASP 39 -10.659 32.356 6.713 1.00 0.00 ATOM 596 CA ASP 39 -9.960 32.969 5.593 1.00 0.00 ATOM 597 C ASP 39 -10.619 34.218 5.014 1.00 0.00 ATOM 598 O ASP 39 -10.577 34.435 3.800 1.00 0.00 ATOM 607 N LYS 40 -11.167 35.083 5.865 1.00 0.00 ATOM 608 CA LYS 40 -11.750 36.325 5.368 1.00 0.00 ATOM 609 C LYS 40 -10.808 37.496 5.659 1.00 0.00 ATOM 610 O LYS 40 -10.738 38.473 4.913 1.00 0.00 ATOM 629 N VAL 41 -10.139 37.412 6.797 1.00 0.00 ATOM 630 CA VAL 41 -9.174 38.423 7.250 1.00 0.00 ATOM 631 C VAL 41 -7.925 37.702 7.766 1.00 0.00 ATOM 632 O VAL 41 -7.960 36.500 7.999 1.00 0.00 ATOM 645 N THR 42 -6.820 38.409 7.957 1.00 0.00 ATOM 646 CA THR 42 -5.621 37.760 8.489 1.00 0.00 ATOM 647 C THR 42 -5.339 38.065 9.965 1.00 0.00 ATOM 648 O THR 42 -5.908 38.989 10.562 1.00 0.00 ATOM 659 N TRP 43 -4.423 37.293 10.551 1.00 0.00 ATOM 660 CA TRP 43 -3.959 37.495 11.929 1.00 0.00 ATOM 661 C TRP 43 -2.853 38.542 11.976 1.00 0.00 ATOM 662 O TRP 43 -2.005 38.583 11.086 1.00 0.00 ATOM 683 N LYS 44 -2.835 39.370 13.016 1.00 0.00 ATOM 684 CA LYS 44 -1.758 40.345 13.176 1.00 0.00 ATOM 685 C LYS 44 -0.538 39.674 13.779 1.00 0.00 ATOM 686 O LYS 44 -0.643 38.699 14.529 1.00 0.00 ATOM 705 N ASP 45 0.624 40.299 13.625 1.00 0.00 ATOM 706 CA ASP 45 1.838 39.733 14.203 1.00 0.00 ATOM 707 C ASP 45 1.721 39.491 15.711 1.00 0.00 ATOM 708 O ASP 45 2.328 38.564 16.235 1.00 0.00 ATOM 717 N ASP 46 0.980 40.332 16.434 1.00 0.00 ATOM 718 CA ASP 46 0.870 40.120 17.873 1.00 0.00 ATOM 719 C ASP 46 -0.256 39.137 18.210 1.00 0.00 ATOM 720 O ASP 46 -0.138 38.314 19.128 1.00 0.00 ATOM 729 N GLU 47 -1.336 39.171 17.426 1.00 0.00 ATOM 730 CA GLU 47 -2.470 38.299 17.674 1.00 0.00 ATOM 731 C GLU 47 -2.109 36.845 17.438 1.00 0.00 ATOM 732 O GLU 47 -2.523 35.982 18.201 1.00 0.00 ATOM 744 N ILE 48 -1.300 36.557 16.421 1.00 0.00 ATOM 745 CA ILE 48 -0.985 35.161 16.187 1.00 0.00 ATOM 746 C ILE 48 -0.156 34.607 17.343 1.00 0.00 ATOM 747 O ILE 48 -0.265 33.427 17.680 1.00 0.00 ATOM 763 N LEU 49 0.671 35.445 17.951 1.00 0.00 ATOM 764 CA LEU 49 1.468 34.986 19.071 1.00 0.00 ATOM 765 C LEU 49 0.552 34.693 20.252 1.00 0.00 ATOM 766 O LEU 49 0.697 33.673 20.931 1.00 0.00 ATOM 782 N LYS 50 -0.464 35.522 20.456 1.00 0.00 ATOM 783 CA LYS 50 -1.374 35.215 21.542 1.00 0.00 ATOM 784 C LYS 50 -2.088 33.899 21.247 1.00 0.00 ATOM 785 O LYS 50 -2.341 33.101 22.151 1.00 0.00 ATOM 804 N ALA 51 -2.417 33.680 19.972 1.00 0.00 ATOM 805 CA ALA 51 -3.163 32.501 19.570 1.00 0.00 ATOM 806 C ALA 51 -2.414 31.230 19.867 1.00 0.00 ATOM 807 O ALA 51 -2.977 30.289 20.441 1.00 0.00 ATOM 814 N VAL 52 -1.119 31.234 19.607 1.00 0.00 ATOM 815 CA VAL 52 -0.360 30.031 19.863 1.00 0.00 ATOM 816 C VAL 52 -0.137 29.806 21.348 1.00 0.00 ATOM 817 O VAL 52 -0.062 28.659 21.799 1.00 0.00 ATOM 830 N HIS 53 -0.099 30.890 22.121 1.00 0.00 ATOM 831 CA HIS 53 0.089 30.797 23.562 1.00 0.00 ATOM 832 C HIS 53 -1.143 30.147 24.196 1.00 0.00 ATOM 833 O HIS 53 -1.032 29.369 25.144 1.00 0.00 ATOM 847 N VAL 54 -2.309 30.440 23.622 1.00 0.00 ATOM 848 CA VAL 54 -3.593 29.890 24.053 1.00 0.00 ATOM 849 C VAL 54 -3.705 28.407 23.693 1.00 0.00 ATOM 850 O VAL 54 -4.227 27.603 24.465 1.00 0.00 ATOM 863 N LEU 55 -3.241 28.075 22.493 1.00 0.00 ATOM 864 CA LEU 55 -3.326 26.741 21.916 1.00 0.00 ATOM 865 C LEU 55 -2.135 25.798 22.076 1.00 0.00 ATOM 866 O LEU 55 -2.145 24.714 21.494 1.00 0.00 ATOM 882 N GLU 56 -1.125 26.189 22.843 1.00 0.00 ATOM 883 CA GLU 56 0.087 25.375 23.055 1.00 0.00 ATOM 884 C GLU 56 0.826 25.046 21.748 1.00 0.00 ATOM 885 O GLU 56 1.356 23.945 21.572 1.00 0.00 ATOM 897 N LEU 57 0.864 26.013 20.845 1.00 0.00 ATOM 898 CA LEU 57 1.533 25.876 19.554 1.00 0.00 ATOM 899 C LEU 57 2.861 26.632 19.461 1.00 0.00 ATOM 900 O LEU 57 3.108 27.591 20.186 1.00 0.00 ATOM 916 N ASN 58 3.729 26.196 18.561 1.00 0.00 ATOM 917 CA ASN 58 5.003 26.873 18.344 1.00 0.00 ATOM 918 C ASN 58 4.844 28.150 17.488 1.00 0.00 ATOM 919 O ASN 58 4.569 28.050 16.294 1.00 0.00 ATOM 930 N PRO 59 5.115 29.360 18.017 1.00 0.00 ATOM 931 CA PRO 59 4.916 30.649 17.356 1.00 0.00 ATOM 932 C PRO 59 5.668 30.825 16.051 1.00 0.00 ATOM 933 O PRO 59 5.336 31.720 15.276 1.00 0.00 ATOM 944 N GLN 60 6.717 30.034 15.839 1.00 0.00 ATOM 945 CA GLN 60 7.525 30.160 14.637 1.00 0.00 ATOM 946 C GLN 60 7.120 29.186 13.538 1.00 0.00 ATOM 947 O GLN 60 7.664 29.233 12.433 1.00 0.00 ATOM 961 N ASP 61 6.189 28.280 13.848 1.00 0.00 ATOM 962 CA ASP 61 5.742 27.287 12.886 1.00 0.00 ATOM 963 C ASP 61 4.356 27.530 12.339 1.00 0.00 ATOM 964 O ASP 61 3.916 26.824 11.429 1.00 0.00 ATOM 973 N ILE 62 3.654 28.533 12.828 1.00 0.00 ATOM 974 CA ILE 62 2.281 28.585 12.403 1.00 0.00 ATOM 975 C ILE 62 2.196 28.993 10.929 1.00 0.00 ATOM 976 O ILE 62 1.446 28.360 10.189 1.00 0.00 ATOM 992 N PRO 63 2.930 30.025 10.438 1.00 0.00 ATOM 993 CA PRO 63 2.910 30.421 9.043 1.00 0.00 ATOM 994 C PRO 63 3.237 29.238 8.129 1.00 0.00 ATOM 995 O PRO 63 2.756 29.187 6.997 1.00 0.00 ATOM 1006 N LYS 64 4.039 28.281 8.626 1.00 0.00 ATOM 1007 CA LYS 64 4.377 27.116 7.844 1.00 0.00 ATOM 1008 C LYS 64 3.125 26.268 7.710 1.00 0.00 ATOM 1009 O LYS 64 2.803 25.759 6.635 1.00 0.00 ATOM 1028 N TYR 65 2.330 26.183 8.780 1.00 0.00 ATOM 1029 CA TYR 65 1.142 25.342 8.741 1.00 0.00 ATOM 1030 C TYR 65 0.219 25.861 7.657 1.00 0.00 ATOM 1031 O TYR 65 -0.425 25.081 6.941 1.00 0.00 ATOM 1049 N PHE 66 0.190 27.193 7.551 1.00 0.00 ATOM 1050 CA PHE 66 -0.660 27.929 6.623 1.00 0.00 ATOM 1051 C PHE 66 -0.183 27.892 5.155 1.00 0.00 ATOM 1052 O PHE 66 -0.982 27.672 4.242 1.00 0.00 ATOM 1069 N PHE 67 1.118 28.119 4.920 1.00 0.00 ATOM 1070 CA PHE 67 1.661 28.198 3.557 1.00 0.00 ATOM 1071 C PHE 67 2.609 27.118 3.042 1.00 0.00 ATOM 1072 O PHE 67 2.841 27.043 1.833 1.00 0.00 ATOM 1089 N ASN 68 3.272 26.370 3.914 1.00 0.00 ATOM 1090 CA ASN 68 4.290 25.455 3.426 1.00 0.00 ATOM 1091 C ASN 68 3.952 24.004 3.707 1.00 0.00 ATOM 1092 O ASN 68 4.005 23.161 2.814 1.00 0.00 ATOM 1103 N ALA 69 3.574 23.736 4.957 1.00 0.00 ATOM 1104 CA ALA 69 3.208 22.406 5.417 1.00 0.00 ATOM 1105 C ALA 69 1.880 22.023 4.811 1.00 0.00 ATOM 1106 O ALA 69 1.633 20.859 4.498 1.00 0.00 ATOM 1113 N LYS 70 1.037 23.043 4.638 1.00 0.00 ATOM 1114 CA LYS 70 -0.306 22.922 4.099 1.00 0.00 ATOM 1115 C LYS 70 -1.128 21.913 4.889 1.00 0.00 ATOM 1116 O LYS 70 -1.747 21.009 4.323 1.00 0.00 TER END