####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 111 ( 444), selected 111 , name R0981-D4TS433_1 # Molecule2: number of CA atoms 111 ( 911), selected 111 , name R0981-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0981-D4TS433_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 105 409 - 513 4.98 7.09 LCS_AVERAGE: 90.14 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 62 443 - 504 2.00 7.96 LCS_AVERAGE: 37.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 479 - 502 0.98 7.59 LCS_AVERAGE: 10.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 111 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 403 S 403 3 3 11 0 3 3 3 3 4 5 6 8 9 16 18 20 21 22 24 27 32 35 35 LCS_GDT K 404 K 404 4 4 11 3 3 4 4 4 4 6 6 8 9 16 18 20 21 23 26 28 32 35 35 LCS_GDT D 405 D 405 4 4 14 3 3 4 4 4 4 5 6 8 9 10 10 11 12 23 28 32 37 40 47 LCS_GDT E 406 E 406 4 4 15 3 3 4 5 5 6 6 8 11 18 22 25 33 41 49 59 64 81 87 93 LCS_GDT L 407 L 407 4 4 15 0 3 4 5 5 6 8 8 15 20 24 27 40 46 61 73 83 90 91 95 LCS_GDT K 408 K 408 3 4 15 0 3 4 5 5 6 7 10 15 20 24 40 48 67 78 86 91 92 98 101 LCS_GDT G 409 G 409 3 4 105 3 4 4 17 20 24 32 38 45 56 63 71 80 86 90 95 98 99 100 101 LCS_GDT H 410 H 410 5 7 105 4 8 22 33 39 56 67 71 74 81 85 89 93 96 97 98 99 99 100 101 LCS_GDT S 411 S 411 5 7 105 4 5 5 5 10 16 22 30 40 49 80 88 93 96 97 98 99 99 100 101 LCS_GDT P 412 P 412 5 7 105 4 5 5 5 6 8 10 11 11 18 20 29 32 44 49 65 72 83 87 93 LCS_GDT V 413 V 413 5 7 105 4 5 5 5 6 7 8 8 8 12 13 13 26 29 49 55 58 79 81 93 LCS_GDT D 414 D 414 5 7 105 3 5 5 5 6 7 13 16 19 25 39 48 54 66 70 80 85 93 99 101 LCS_GDT I 415 I 415 4 7 105 3 4 5 6 19 27 38 52 67 74 82 88 93 96 97 98 99 99 100 101 LCS_GDT E 416 E 416 4 7 105 1 4 5 12 17 28 38 52 65 73 80 86 93 96 97 98 99 99 100 101 LCS_GDT Y 417 Y 417 3 6 105 3 3 5 6 10 16 28 39 53 62 76 84 90 94 97 98 99 99 100 101 LCS_GDT N 418 N 418 3 6 105 3 3 3 6 8 9 10 13 15 20 28 33 39 63 70 77 85 89 96 99 LCS_GDT D 419 D 419 3 6 105 3 3 3 5 8 12 13 16 20 24 60 68 74 81 90 96 98 99 100 101 LCS_GDT Y 420 Y 420 3 6 105 3 3 5 6 8 12 18 33 45 60 74 86 93 96 97 98 99 99 100 101 LCS_GDT F 421 F 421 3 6 105 3 3 4 8 14 27 45 67 74 80 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 422 K 422 7 10 105 10 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 423 Y 423 7 10 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 424 Q 424 7 10 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT W 425 W 425 7 10 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT W 426 W 426 7 10 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 427 K 427 7 10 105 11 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT S 428 S 428 7 10 105 6 35 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT E 429 E 429 4 10 105 3 7 22 34 54 64 71 76 78 80 80 82 90 93 94 96 99 99 100 101 LCS_GDT V 430 V 430 4 10 105 4 14 31 54 60 67 74 77 78 80 85 90 91 96 97 98 99 99 100 101 LCS_GDT N 431 N 431 4 12 105 3 6 20 39 57 65 72 77 78 80 85 90 93 96 97 98 99 99 100 101 LCS_GDT E 432 E 432 4 12 105 3 6 6 9 14 22 30 71 72 77 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 433 K 433 4 12 105 3 6 7 10 17 61 66 73 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT S 434 S 434 9 12 105 4 8 8 9 11 19 41 62 74 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 435 L 435 9 12 105 5 8 8 9 14 19 24 31 49 69 82 90 93 96 97 98 99 99 100 101 LCS_GDT K 436 K 436 9 12 105 3 8 8 10 15 26 35 48 65 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT D 437 D 437 9 12 105 5 8 8 12 18 26 39 57 72 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 438 L 438 9 12 105 5 8 8 12 18 35 39 55 74 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT A 439 A 439 9 12 105 5 8 8 9 14 19 25 36 50 69 85 90 93 96 97 98 99 99 100 101 LCS_GDT M 440 M 440 9 12 105 5 8 8 10 15 21 30 44 57 72 84 90 93 96 97 98 99 99 100 101 LCS_GDT T 441 T 441 9 30 105 5 8 8 10 15 26 41 56 73 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT V 442 V 442 9 34 105 3 4 7 10 23 41 53 70 77 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT P 443 P 443 4 62 105 3 12 45 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 444 Q 444 4 62 105 3 14 30 46 61 70 74 77 78 81 85 90 91 96 97 98 99 99 100 101 LCS_GDT G 445 G 445 12 62 105 4 36 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 446 Y 446 13 62 105 13 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT H 447 H 447 13 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 448 T 448 13 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT F 449 F 449 13 62 105 19 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 450 Y 450 13 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT C 451 C 451 13 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 452 Q 452 13 62 105 17 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 453 G 453 13 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT S 454 S 454 13 62 105 5 35 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT I 455 I 455 13 62 105 11 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT A 456 A 456 13 62 105 5 28 51 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 457 G 457 13 62 105 5 12 38 58 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 458 T 458 13 62 105 5 13 47 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT P 459 P 459 13 62 105 5 11 21 43 63 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 460 K 460 13 62 105 3 6 12 32 63 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 461 G 461 13 62 105 9 37 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT R 462 R 462 12 62 105 15 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT S 463 S 463 12 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT I 464 I 464 12 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT R 465 R 465 12 62 105 12 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 466 G 466 12 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 467 T 467 12 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT I 468 I 468 12 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 469 Q 469 12 62 105 11 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT V 470 V 470 12 62 105 11 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT D 471 D 471 12 62 105 8 27 47 60 64 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 472 Y 472 12 62 105 8 35 52 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT D 473 D 473 3 62 105 4 24 37 57 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 474 K 474 3 62 105 3 13 30 44 62 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 475 G 475 5 62 105 3 3 6 16 21 43 68 75 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT D 476 D 476 5 62 105 3 4 16 49 59 68 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT P 477 P 477 5 62 105 3 4 47 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 478 Y 478 5 62 105 3 4 6 6 7 12 23 65 78 80 80 83 88 93 96 98 99 99 100 101 LCS_GDT R 479 R 479 24 62 105 15 39 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT A 480 A 480 24 62 105 3 37 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT N 481 N 481 24 62 105 3 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 482 K 482 24 62 105 14 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT F 483 F 483 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT V 484 V 484 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 485 K 485 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 486 L 486 24 62 105 13 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 487 L 487 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT F 488 F 488 24 62 105 7 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 489 T 489 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT D 490 D 490 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 491 T 491 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT E 492 E 492 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 493 G 493 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT I 494 I 494 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT P 495 P 495 24 62 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 496 Y 496 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT T 497 T 497 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 498 L 498 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 499 Y 499 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 500 Y 500 24 62 105 15 39 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 501 G 501 24 62 105 5 23 42 56 64 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT G 502 G 502 24 62 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Y 503 Y 503 4 62 105 3 26 47 56 64 68 74 77 78 80 85 90 93 96 97 98 99 99 100 101 LCS_GDT N 504 N 504 4 62 105 3 14 39 56 64 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 505 Q 505 4 38 105 3 3 5 9 17 27 47 68 75 79 84 88 91 96 97 98 99 99 100 101 LCS_GDT G 506 G 506 8 38 105 5 22 44 56 64 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT W 507 W 507 8 38 105 16 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 508 K 508 8 38 105 16 40 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT P 509 P 509 8 38 105 16 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT L 510 L 510 8 38 105 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT K 511 K 511 8 38 105 13 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT Q 512 Q 512 8 38 105 11 41 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_GDT S 513 S 513 8 38 105 9 41 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 LCS_AVERAGE LCS_A: 45.81 ( 10.23 37.06 90.14 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 20 42 53 60 65 70 74 77 78 81 85 90 93 96 97 98 99 99 100 101 GDT PERCENT_AT 18.02 37.84 47.75 54.05 58.56 63.06 66.67 69.37 70.27 72.97 76.58 81.08 83.78 86.49 87.39 88.29 89.19 89.19 90.09 90.99 GDT RMS_LOCAL 0.37 0.64 0.82 0.99 1.21 1.43 1.65 1.81 1.91 2.40 2.78 3.05 3.63 3.71 3.84 3.88 3.95 3.95 4.09 4.25 GDT RMS_ALL_AT 7.80 7.82 7.85 7.82 7.88 7.87 7.95 8.00 8.07 7.86 7.71 7.82 7.33 7.38 7.32 7.32 7.36 7.36 7.29 7.23 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 403 S 403 31.028 2 0.045 0.045 31.719 0.000 0.000 - LGA K 404 K 404 28.162 5 0.618 0.618 29.148 0.000 0.000 - LGA D 405 D 405 28.618 4 0.072 0.072 28.618 0.000 0.000 - LGA E 406 E 406 22.490 5 0.607 0.607 24.710 0.000 0.000 - LGA L 407 L 407 19.598 4 0.591 0.591 21.176 0.000 0.000 - LGA K 408 K 408 17.853 5 0.628 0.628 18.347 0.000 0.000 - LGA G 409 G 409 13.495 0 0.528 0.528 15.121 0.000 0.000 - LGA H 410 H 410 7.488 6 0.681 0.681 9.788 0.000 0.000 - LGA S 411 S 411 10.740 2 0.030 0.030 12.163 0.000 0.000 - LGA P 412 P 412 15.059 3 0.053 0.053 18.202 0.000 0.000 - LGA V 413 V 413 17.839 3 0.605 0.605 17.839 0.000 0.000 - LGA D 414 D 414 16.372 4 0.058 0.058 17.199 0.000 0.000 - LGA I 415 I 415 11.644 4 0.624 0.624 12.618 0.000 0.000 - LGA E 416 E 416 12.262 5 0.662 0.662 14.206 0.000 0.000 - LGA Y 417 Y 417 12.503 8 0.411 0.411 13.967 0.000 0.000 - LGA N 418 N 418 17.575 4 0.214 0.214 18.827 0.000 0.000 - LGA D 419 D 419 14.557 4 0.363 0.363 15.165 0.000 0.000 - LGA Y 420 Y 420 12.090 8 0.163 0.163 12.964 0.000 0.000 - LGA F 421 F 421 7.715 7 0.078 0.078 9.477 0.000 0.000 - LGA K 422 K 422 1.194 5 0.612 0.612 3.063 61.818 27.475 - LGA Y 423 Y 423 0.528 8 0.068 0.068 0.528 95.455 31.818 - LGA Q 424 Q 424 0.698 5 0.067 0.067 0.818 86.364 38.384 - LGA W 425 W 425 0.780 10 0.116 0.116 0.830 86.364 24.675 - LGA W 426 W 426 0.539 10 0.047 0.047 1.726 74.091 21.169 - LGA K 427 K 427 1.369 5 0.222 0.222 2.728 56.364 25.051 - LGA S 428 S 428 1.647 2 0.732 0.732 4.998 34.091 22.727 - LGA E 429 E 429 5.990 5 0.637 0.637 5.990 3.182 1.414 - LGA V 430 V 430 3.821 3 0.608 0.608 4.594 7.273 4.156 - LGA N 431 N 431 4.359 4 0.538 0.538 4.667 5.000 2.500 - LGA E 432 E 432 6.777 5 0.030 0.030 7.194 0.000 0.000 - LGA K 433 K 433 5.503 5 0.093 0.093 6.155 0.000 0.000 - LGA S 434 S 434 6.789 2 0.349 0.349 7.146 0.000 0.000 - LGA L 435 L 435 8.364 4 0.137 0.137 8.364 0.000 0.000 - LGA K 436 K 436 7.857 5 0.043 0.043 7.895 0.000 0.000 - LGA D 437 D 437 7.745 4 0.066 0.066 7.745 0.000 0.000 - LGA L 438 L 438 7.142 4 0.029 0.029 7.347 0.000 0.000 - LGA A 439 A 439 8.059 1 0.054 0.054 8.228 0.000 0.000 - LGA M 440 M 440 8.446 4 0.082 0.082 8.449 0.000 0.000 - LGA T 441 T 441 7.263 3 0.115 0.115 7.529 0.000 0.000 - LGA V 442 V 442 5.819 3 0.211 0.211 6.359 2.727 1.558 - LGA P 443 P 443 2.303 3 0.674 0.674 3.684 28.636 16.364 - LGA Q 444 Q 444 3.348 5 0.527 0.527 3.348 37.273 16.566 - LGA G 445 G 445 2.106 0 0.640 0.640 2.106 60.000 60.000 - LGA Y 446 Y 446 1.425 8 0.063 0.063 1.978 54.545 18.182 - LGA H 447 H 447 0.795 6 0.093 0.093 1.047 77.727 31.091 - LGA T 448 T 448 0.581 3 0.041 0.041 0.738 90.909 51.948 - LGA F 449 F 449 0.361 7 0.033 0.033 0.449 100.000 36.364 - LGA Y 450 Y 450 0.662 8 0.033 0.033 0.699 86.364 28.788 - LGA C 451 C 451 0.873 2 0.037 0.037 0.873 81.818 54.545 - LGA Q 452 Q 452 0.618 5 0.050 0.050 0.648 81.818 36.364 - LGA G 453 G 453 0.308 0 0.637 0.637 2.976 77.273 77.273 - LGA S 454 S 454 1.382 2 0.056 0.056 1.426 73.636 49.091 - LGA I 455 I 455 0.622 4 0.047 0.047 1.165 77.727 38.864 - LGA A 456 A 456 1.774 1 0.022 0.022 2.055 51.364 41.091 - LGA G 457 G 457 2.821 0 0.009 0.009 2.938 27.273 27.273 - LGA T 458 T 458 2.270 3 0.018 0.018 3.132 30.455 17.403 - LGA P 459 P 459 3.435 3 0.635 0.635 4.518 16.364 9.351 - LGA K 460 K 460 3.559 5 0.598 0.598 5.199 10.000 4.444 - LGA G 461 G 461 0.995 0 0.181 0.181 1.303 73.636 73.636 - LGA R 462 R 462 0.458 7 0.102 0.102 0.680 90.909 33.058 - LGA S 463 S 463 0.580 2 0.024 0.024 0.733 81.818 54.545 - LGA I 464 I 464 0.672 4 0.077 0.077 0.672 81.818 40.909 - LGA R 465 R 465 0.607 7 0.126 0.126 0.738 90.909 33.058 - LGA G 466 G 466 0.065 0 0.000 0.000 0.184 100.000 100.000 - LGA T 467 T 467 0.150 3 0.040 0.040 0.581 95.455 54.545 - LGA I 468 I 468 0.750 4 0.020 0.020 1.369 73.636 36.818 - LGA Q 469 Q 469 1.532 5 0.043 0.043 1.532 61.818 27.475 - LGA V 470 V 470 1.630 3 0.064 0.064 2.330 44.545 25.455 - LGA D 471 D 471 2.619 4 0.047 0.047 2.619 45.455 22.727 - LGA Y 472 Y 472 1.821 8 0.107 0.107 2.327 51.364 17.121 - LGA D 473 D 473 2.838 4 0.247 0.247 3.526 23.636 11.818 - LGA K 474 K 474 3.919 5 0.057 0.057 4.256 8.182 3.636 - LGA G 475 G 475 5.352 0 0.501 0.501 5.816 0.455 0.455 - LGA D 476 D 476 3.802 4 0.059 0.059 5.074 28.182 14.091 - LGA P 477 P 477 2.409 3 0.045 0.045 4.954 29.091 16.623 - LGA Y 478 Y 478 5.399 8 0.335 0.335 5.399 4.091 1.364 - LGA R 479 R 479 1.791 7 0.663 0.663 3.084 43.182 15.702 - LGA A 480 A 480 1.828 1 0.670 0.670 2.208 55.000 44.000 - LGA N 481 N 481 1.657 4 0.098 0.098 2.766 45.000 22.500 - LGA K 482 K 482 0.870 5 0.025 0.025 0.926 81.818 36.364 - LGA F 483 F 483 1.279 7 0.080 0.080 1.318 65.455 23.802 - LGA V 484 V 484 1.216 3 0.032 0.032 1.216 65.455 37.403 - LGA K 485 K 485 1.171 5 0.014 0.014 1.338 73.636 32.727 - LGA L 486 L 486 0.782 4 0.092 0.092 1.423 77.727 38.864 - LGA L 487 L 487 0.774 4 0.084 0.084 0.921 81.818 40.909 - LGA F 488 F 488 1.037 7 0.059 0.059 1.037 86.818 31.570 - LGA T 489 T 489 0.533 3 0.079 0.079 0.533 90.909 51.948 - LGA D 490 D 490 0.561 4 0.070 0.070 0.561 86.364 43.182 - LGA T 491 T 491 0.439 3 0.146 0.146 0.977 90.909 51.948 - LGA E 492 E 492 0.733 5 0.054 0.054 0.733 81.818 36.364 - LGA G 493 G 493 0.580 0 0.058 0.058 0.702 81.818 81.818 - LGA I 494 I 494 0.699 4 0.045 0.045 0.699 90.909 45.455 - LGA P 495 P 495 0.415 3 0.000 0.000 0.706 86.364 49.351 - LGA Y 496 Y 496 0.862 8 0.052 0.052 1.277 73.636 24.545 - LGA T 497 T 497 1.161 3 0.123 0.123 1.161 73.636 42.078 - LGA L 498 L 498 0.971 4 0.108 0.108 1.249 77.727 38.864 - LGA Y 499 Y 499 1.096 8 0.049 0.049 1.922 61.818 20.606 - LGA Y 500 Y 500 1.471 8 0.027 0.027 1.698 61.818 20.606 - LGA G 501 G 501 3.358 0 0.251 0.251 4.489 19.545 19.545 - LGA G 502 G 502 0.741 0 0.681 0.681 2.679 64.091 64.091 - LGA Y 503 Y 503 3.344 8 0.048 0.048 3.344 40.455 13.485 - LGA N 504 N 504 3.635 4 0.206 0.206 6.763 12.273 6.136 - LGA Q 505 Q 505 7.140 5 0.301 0.301 7.966 0.000 0.000 - LGA G 506 G 506 3.133 0 0.070 0.070 4.170 11.818 11.818 - LGA W 507 W 507 1.429 10 0.128 0.128 1.701 61.818 17.662 - LGA K 508 K 508 1.467 5 0.083 0.083 1.615 65.909 29.293 - LGA P 509 P 509 0.936 3 0.033 0.033 1.305 77.727 44.416 - LGA L 510 L 510 0.474 4 0.045 0.045 0.602 90.909 45.455 - LGA K 511 K 511 0.460 5 0.172 0.172 0.886 95.455 42.424 - LGA Q 512 Q 512 0.878 5 0.091 0.091 1.344 73.636 32.727 - LGA S 513 S 513 1.503 2 0.113 0.113 2.256 48.182 32.121 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 111 444 444 100.00 911 444 48.74 111 0 SUMMARY(RMSD_GDC): 6.822 6.696 6.696 43.751 23.181 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 111 111 4.0 77 1.81 62.387 57.905 4.034 LGA_LOCAL RMSD: 1.809 Number of atoms: 77 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.000 Number of assigned atoms: 111 Std_ASGN_ATOMS RMSD: 6.822 Standard rmsd on all 111 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.311335 * X + -0.698654 * Y + 0.644169 * Z + 136.985764 Y_new = -0.897744 * X + -0.006070 * Y + -0.440475 * Z + 15.432335 Z_new = 0.311649 * X + -0.715434 * Y + -0.625322 * Z + 154.997742 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.904615 -0.316928 -2.289086 [DEG: -109.1264 -18.1587 -131.1550 ] ZXZ: 0.971034 2.246341 2.730771 [DEG: 55.6362 128.7059 156.4616 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: R0981-D4TS433_1 REMARK 2: R0981-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap R0981-D4TS433_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 111 111 4.0 77 1.81 57.905 6.82 REMARK ---------------------------------------------------------- MOLECULE R0981-D4TS433_1 PFRMAT TS TARGET R0981-D4 MODEL 1 PARENT N/A ATOM 6329 N SER 403 136.986 15.432 154.998 1.00 0.00 ATOM 6330 CA SER 403 136.469 15.757 153.670 1.00 0.00 ATOM 6331 C SER 403 137.316 15.188 152.531 1.00 0.00 ATOM 6332 O SER 403 138.466 14.793 152.731 1.00 0.00 ATOM 6340 N LYS 404 136.756 15.211 151.323 1.00 0.00 ATOM 6341 CA LYS 404 137.464 14.841 150.099 1.00 0.00 ATOM 6342 C LYS 404 138.644 15.724 149.798 1.00 0.00 ATOM 6343 O LYS 404 138.619 16.928 150.060 1.00 0.00 ATOM 6362 N ASP 405 139.662 15.127 149.198 1.00 0.00 ATOM 6363 CA ASP 405 140.851 15.823 148.736 1.00 0.00 ATOM 6364 C ASP 405 140.499 16.890 147.682 1.00 0.00 ATOM 6365 O ASP 405 141.173 17.914 147.561 1.00 0.00 ATOM 6374 N GLU 406 139.419 16.612 146.932 1.00 0.00 ATOM 6375 CA GLU 406 138.900 17.481 145.882 1.00 0.00 ATOM 6376 C GLU 406 137.371 17.394 145.825 1.00 0.00 ATOM 6377 O GLU 406 136.804 16.302 145.869 1.00 0.00 ATOM 6389 N LEU 407 136.704 18.541 145.711 1.00 0.00 ATOM 6390 CA LEU 407 135.245 18.579 145.630 1.00 0.00 ATOM 6391 C LEU 407 134.680 19.389 144.475 1.00 0.00 ATOM 6392 O LEU 407 135.009 20.567 144.304 1.00 0.00 ATOM 6408 N LYS 408 133.801 18.751 143.714 1.00 0.00 ATOM 6409 CA LYS 408 133.049 19.353 142.628 1.00 0.00 ATOM 6410 C LYS 408 131.582 18.996 142.845 1.00 0.00 ATOM 6411 O LYS 408 131.283 17.918 143.358 1.00 0.00 ATOM 6430 N GLY 409 130.678 19.896 142.481 1.00 0.00 ATOM 6431 CA GLY 409 129.249 19.620 142.607 1.00 0.00 ATOM 6432 C GLY 409 128.622 19.329 141.252 1.00 0.00 ATOM 6433 O GLY 409 129.307 18.938 140.310 1.00 0.00 ATOM 6437 N HIS 410 127.313 19.531 141.156 1.00 0.00 ATOM 6438 CA HIS 410 126.592 19.301 139.909 1.00 0.00 ATOM 6439 C HIS 410 126.943 20.333 138.855 1.00 0.00 ATOM 6440 O HIS 410 127.208 21.495 139.179 1.00 0.00 ATOM 6454 N SER 411 126.925 19.917 137.601 1.00 0.00 ATOM 6455 CA SER 411 127.185 20.820 136.498 1.00 0.00 ATOM 6456 C SER 411 126.187 21.972 136.472 1.00 0.00 ATOM 6457 O SER 411 124.993 21.743 136.646 1.00 0.00 ATOM 6465 N PRO 412 126.622 23.205 136.203 1.00 0.00 ATOM 6466 CA PRO 412 125.809 24.389 136.030 1.00 0.00 ATOM 6467 C PRO 412 125.023 24.379 134.731 1.00 0.00 ATOM 6468 O PRO 412 124.189 25.250 134.500 1.00 0.00 ATOM 6479 N VAL 413 125.357 23.441 133.824 1.00 0.00 ATOM 6480 CA VAL 413 124.747 23.422 132.501 1.00 0.00 ATOM 6481 C VAL 413 124.018 22.119 132.155 1.00 0.00 ATOM 6482 O VAL 413 122.943 22.157 131.559 1.00 0.00 ATOM 6495 N ASP 414 124.631 20.972 132.455 1.00 0.00 ATOM 6496 CA ASP 414 124.088 19.686 132.004 1.00 0.00 ATOM 6497 C ASP 414 124.377 18.590 133.043 1.00 0.00 ATOM 6498 O ASP 414 125.523 18.168 133.193 1.00 0.00 ATOM 6507 N ILE 415 123.338 18.182 133.783 1.00 0.00 ATOM 6508 CA ILE 415 123.450 17.218 134.890 1.00 0.00 ATOM 6509 C ILE 415 122.947 15.830 134.475 1.00 0.00 ATOM 6510 O ILE 415 121.834 15.697 133.959 1.00 0.00 ATOM 6526 N GLU 416 123.776 14.806 134.686 1.00 0.00 ATOM 6527 CA GLU 416 123.455 13.430 134.281 1.00 0.00 ATOM 6528 C GLU 416 122.982 12.551 135.434 1.00 0.00 ATOM 6529 O GLU 416 123.166 12.877 136.604 1.00 0.00 ATOM 6541 N TYR 417 122.446 11.374 135.103 1.00 0.00 ATOM 6542 CA TYR 417 122.090 10.366 136.118 1.00 0.00 ATOM 6543 C TYR 417 123.350 9.929 136.894 1.00 0.00 ATOM 6544 O TYR 417 123.283 9.362 137.979 1.00 0.00 ATOM 6562 N ASN 418 124.511 10.179 136.297 1.00 0.00 ATOM 6563 CA ASN 418 125.808 9.897 136.872 1.00 0.00 ATOM 6564 C ASN 418 126.169 10.932 137.947 1.00 0.00 ATOM 6565 O ASN 418 127.138 10.745 138.677 1.00 0.00 ATOM 6576 N ASP 419 125.406 12.032 138.019 1.00 0.00 ATOM 6577 CA ASP 419 125.578 13.098 139.005 1.00 0.00 ATOM 6578 C ASP 419 124.457 13.053 140.067 1.00 0.00 ATOM 6579 O ASP 419 124.687 13.288 141.259 1.00 0.00 ATOM 6588 N TYR 420 123.233 12.771 139.594 1.00 0.00 ATOM 6589 CA TYR 420 122.005 12.726 140.402 1.00 0.00 ATOM 6590 C TYR 420 121.370 11.337 140.382 1.00 0.00 ATOM 6591 O TYR 420 121.220 10.740 139.323 1.00 0.00 ATOM 6609 N PHE 421 120.969 10.839 141.545 1.00 0.00 ATOM 6610 CA PHE 421 120.430 9.482 141.643 1.00 0.00 ATOM 6611 C PHE 421 119.588 9.221 142.869 1.00 0.00 ATOM 6612 O PHE 421 119.728 9.894 143.897 1.00 0.00 ATOM 6629 N LYS 422 118.669 8.271 142.722 1.00 0.00 ATOM 6630 CA LYS 422 117.860 7.796 143.825 1.00 0.00 ATOM 6631 C LYS 422 117.744 6.264 143.793 1.00 0.00 ATOM 6632 O LYS 422 117.793 5.660 142.720 1.00 0.00 ATOM 6651 N TYR 423 117.520 5.649 144.960 1.00 0.00 ATOM 6652 CA TYR 423 117.395 4.188 145.041 1.00 0.00 ATOM 6653 C TYR 423 116.507 3.711 146.198 1.00 0.00 ATOM 6654 O TYR 423 116.496 4.317 147.269 1.00 0.00 ATOM 6672 N GLN 424 115.765 2.622 145.988 1.00 0.00 ATOM 6673 CA GLN 424 114.978 2.047 147.079 1.00 0.00 ATOM 6674 C GLN 424 115.400 0.628 147.440 1.00 0.00 ATOM 6675 O GLN 424 115.517 -0.246 146.575 1.00 0.00 ATOM 6689 N TRP 425 115.633 0.408 148.728 1.00 0.00 ATOM 6690 CA TRP 425 115.954 -0.916 149.234 1.00 0.00 ATOM 6691 C TRP 425 114.654 -1.624 149.634 1.00 0.00 ATOM 6692 O TRP 425 113.774 -1.010 150.255 1.00 0.00 ATOM 6713 N TRP 426 114.547 -2.908 149.298 1.00 0.00 ATOM 6714 CA TRP 426 113.331 -3.682 149.561 1.00 0.00 ATOM 6715 C TRP 426 113.552 -4.802 150.574 1.00 0.00 ATOM 6716 O TRP 426 114.660 -5.319 150.694 1.00 0.00 ATOM 6737 N LYS 427 112.481 -5.154 151.292 1.00 0.00 ATOM 6738 CA LYS 427 112.436 -6.197 152.340 1.00 0.00 ATOM 6739 C LYS 427 112.671 -7.642 151.869 1.00 0.00 ATOM 6740 O LYS 427 112.719 -8.561 152.693 1.00 0.00 ATOM 6759 N SER 428 112.751 -7.858 150.557 1.00 0.00 ATOM 6760 CA SER 428 113.015 -9.188 150.006 1.00 0.00 ATOM 6761 C SER 428 114.395 -9.601 150.483 1.00 0.00 ATOM 6762 O SER 428 115.078 -8.793 151.093 1.00 0.00 ATOM 6770 N GLU 429 114.817 -10.839 150.235 1.00 0.00 ATOM 6771 CA GLU 429 116.119 -11.265 150.753 1.00 0.00 ATOM 6772 C GLU 429 117.194 -10.220 150.456 1.00 0.00 ATOM 6773 O GLU 429 117.352 -9.779 149.313 1.00 0.00 ATOM 6785 N VAL 430 117.931 -9.856 151.507 1.00 0.00 ATOM 6786 CA VAL 430 118.959 -8.830 151.440 1.00 0.00 ATOM 6787 C VAL 430 120.346 -9.459 151.523 1.00 0.00 ATOM 6788 O VAL 430 120.607 -10.284 152.400 1.00 0.00 ATOM 6801 N ASN 431 121.213 -9.096 150.586 1.00 0.00 ATOM 6802 CA ASN 431 122.573 -9.623 150.530 1.00 0.00 ATOM 6803 C ASN 431 123.518 -8.809 151.417 1.00 0.00 ATOM 6804 O ASN 431 123.088 -7.969 152.205 1.00 0.00 ATOM 6815 N GLU 432 124.815 -9.052 151.276 1.00 0.00 ATOM 6816 CA GLU 432 125.840 -8.437 152.116 1.00 0.00 ATOM 6817 C GLU 432 126.320 -7.045 151.672 1.00 0.00 ATOM 6818 O GLU 432 127.247 -6.495 152.279 1.00 0.00 ATOM 6830 N LYS 433 125.757 -6.498 150.591 1.00 0.00 ATOM 6831 CA LYS 433 126.240 -5.218 150.085 1.00 0.00 ATOM 6832 C LYS 433 125.163 -4.173 149.789 1.00 0.00 ATOM 6833 O LYS 433 124.159 -4.460 149.142 1.00 0.00 ATOM 6852 N SER 434 125.416 -2.932 150.215 1.00 0.00 ATOM 6853 CA SER 434 124.538 -1.817 149.878 1.00 0.00 ATOM 6854 C SER 434 125.308 -0.837 148.970 1.00 0.00 ATOM 6855 O SER 434 125.414 -1.039 147.750 1.00 0.00 ATOM 6863 N LEU 435 125.962 0.149 149.594 1.00 0.00 ATOM 6864 CA LEU 435 126.789 1.133 148.900 1.00 0.00 ATOM 6865 C LEU 435 127.974 0.460 148.240 1.00 0.00 ATOM 6866 O LEU 435 128.549 0.966 147.275 1.00 0.00 ATOM 6882 N LYS 436 128.335 -0.708 148.756 1.00 0.00 ATOM 6883 CA LYS 436 129.432 -1.495 148.245 1.00 0.00 ATOM 6884 C LYS 436 129.225 -1.843 146.765 1.00 0.00 ATOM 6885 O LYS 436 130.193 -1.927 146.017 1.00 0.00 ATOM 6904 N ASP 437 127.957 -2.059 146.343 1.00 0.00 ATOM 6905 CA ASP 437 127.711 -2.321 144.924 1.00 0.00 ATOM 6906 C ASP 437 127.222 -1.068 144.209 1.00 0.00 ATOM 6907 O ASP 437 127.574 -0.849 143.042 1.00 0.00 ATOM 6916 N LEU 438 126.457 -0.202 144.887 1.00 0.00 ATOM 6917 CA LEU 438 125.956 0.968 144.167 1.00 0.00 ATOM 6918 C LEU 438 127.149 1.800 143.690 1.00 0.00 ATOM 6919 O LEU 438 127.201 2.254 142.556 1.00 0.00 ATOM 6935 N ALA 439 128.196 1.890 144.501 1.00 0.00 ATOM 6936 CA ALA 439 129.388 2.627 144.112 1.00 0.00 ATOM 6937 C ALA 439 130.017 2.083 142.818 1.00 0.00 ATOM 6938 O ALA 439 130.728 2.803 142.121 1.00 0.00 ATOM 6945 N MET 440 129.829 0.791 142.534 1.00 0.00 ATOM 6946 CA MET 440 130.439 0.162 141.374 1.00 0.00 ATOM 6947 C MET 440 129.608 0.342 140.104 1.00 0.00 ATOM 6948 O MET 440 130.168 0.418 139.005 1.00 0.00 ATOM 6962 N THR 441 128.278 0.398 140.245 1.00 0.00 ATOM 6963 CA THR 441 127.425 0.469 139.053 1.00 0.00 ATOM 6964 C THR 441 126.816 1.857 138.804 1.00 0.00 ATOM 6965 O THR 441 126.533 2.220 137.660 1.00 0.00 ATOM 6976 N VAL 442 126.643 2.633 139.867 1.00 0.00 ATOM 6977 CA VAL 442 126.082 3.976 139.835 1.00 0.00 ATOM 6978 C VAL 442 126.957 4.837 140.774 1.00 0.00 ATOM 6979 O VAL 442 126.586 5.083 141.917 1.00 0.00 ATOM 6992 N PRO 443 128.157 5.245 140.337 1.00 0.00 ATOM 6993 CA PRO 443 129.184 5.845 141.172 1.00 0.00 ATOM 6994 C PRO 443 128.886 7.238 141.746 1.00 0.00 ATOM 6995 O PRO 443 129.473 7.610 142.769 1.00 0.00 ATOM 7006 N GLN 444 127.974 7.996 141.110 1.00 0.00 ATOM 7007 CA GLN 444 127.565 9.364 141.506 1.00 0.00 ATOM 7008 C GLN 444 128.451 10.154 142.467 1.00 0.00 ATOM 7009 O GLN 444 129.107 11.124 142.090 1.00 0.00 ATOM 7023 N GLY 445 128.376 9.788 143.741 1.00 0.00 ATOM 7024 CA GLY 445 129.005 10.509 144.833 1.00 0.00 ATOM 7025 C GLY 445 127.920 10.996 145.798 1.00 0.00 ATOM 7026 O GLY 445 128.186 11.360 146.943 1.00 0.00 ATOM 7030 N TYR 446 126.682 11.016 145.312 1.00 0.00 ATOM 7031 CA TYR 446 125.531 11.425 146.107 1.00 0.00 ATOM 7032 C TYR 446 124.228 10.839 145.581 1.00 0.00 ATOM 7033 O TYR 446 123.983 10.851 144.370 1.00 0.00 ATOM 7051 N HIS 447 123.374 10.358 146.492 1.00 0.00 ATOM 7052 CA HIS 447 122.051 9.893 146.056 1.00 0.00 ATOM 7053 C HIS 447 120.967 9.948 147.138 1.00 0.00 ATOM 7054 O HIS 447 121.242 10.005 148.340 1.00 0.00 ATOM 7068 N THR 448 119.716 9.898 146.688 1.00 0.00 ATOM 7069 CA THR 448 118.530 9.878 147.562 1.00 0.00 ATOM 7070 C THR 448 117.974 8.464 147.693 1.00 0.00 ATOM 7071 O THR 448 117.947 7.719 146.716 1.00 0.00 ATOM 7082 N PHE 449 117.584 8.050 148.887 1.00 0.00 ATOM 7083 CA PHE 449 117.064 6.702 148.979 1.00 0.00 ATOM 7084 C PHE 449 115.920 6.500 149.942 1.00 0.00 ATOM 7085 O PHE 449 115.674 7.280 150.870 1.00 0.00 ATOM 7102 N TYR 450 115.255 5.381 149.724 1.00 0.00 ATOM 7103 CA TYR 450 114.193 4.897 150.588 1.00 0.00 ATOM 7104 C TYR 450 114.553 3.478 150.988 1.00 0.00 ATOM 7105 O TYR 450 115.183 2.771 150.201 1.00 0.00 ATOM 7123 N CYS 451 114.194 3.061 152.193 1.00 0.00 ATOM 7124 CA CYS 451 114.525 1.711 152.619 1.00 0.00 ATOM 7125 C CYS 451 113.462 1.101 153.529 1.00 0.00 ATOM 7126 O CYS 451 113.088 1.651 154.566 1.00 0.00 ATOM 7134 N GLN 452 112.981 -0.073 153.147 1.00 0.00 ATOM 7135 CA GLN 452 111.936 -0.720 153.935 1.00 0.00 ATOM 7136 C GLN 452 112.448 -1.296 155.261 1.00 0.00 ATOM 7137 O GLN 452 113.613 -1.683 155.401 1.00 0.00 ATOM 7151 N GLY 453 111.552 -1.372 156.232 1.00 0.00 ATOM 7152 CA GLY 453 111.908 -1.971 157.499 1.00 0.00 ATOM 7153 C GLY 453 112.279 -3.424 157.294 1.00 0.00 ATOM 7154 O GLY 453 112.063 -3.992 156.222 1.00 0.00 ATOM 7158 N SER 454 112.906 -3.990 158.315 1.00 0.00 ATOM 7159 CA SER 454 113.435 -5.359 158.339 1.00 0.00 ATOM 7160 C SER 454 114.628 -5.612 157.385 1.00 0.00 ATOM 7161 O SER 454 115.170 -6.717 157.371 1.00 0.00 ATOM 7169 N ILE 455 115.089 -4.602 156.642 1.00 0.00 ATOM 7170 CA ILE 455 116.252 -4.788 155.771 1.00 0.00 ATOM 7171 C ILE 455 117.595 -4.826 156.501 1.00 0.00 ATOM 7172 O ILE 455 117.881 -3.993 157.370 1.00 0.00 ATOM 7188 N ALA 456 118.417 -5.819 156.177 1.00 0.00 ATOM 7189 CA ALA 456 119.717 -5.912 156.821 1.00 0.00 ATOM 7190 C ALA 456 120.510 -4.643 156.537 1.00 0.00 ATOM 7191 O ALA 456 120.513 -4.151 155.413 1.00 0.00 ATOM 7198 N GLY 457 121.205 -4.130 157.546 1.00 0.00 ATOM 7199 CA GLY 457 121.998 -2.915 157.379 1.00 0.00 ATOM 7200 C GLY 457 121.238 -1.633 157.762 1.00 0.00 ATOM 7201 O GLY 457 121.835 -0.563 157.869 1.00 0.00 ATOM 7205 N THR 458 119.924 -1.723 157.981 1.00 0.00 ATOM 7206 CA THR 458 119.173 -0.545 158.401 1.00 0.00 ATOM 7207 C THR 458 119.545 -0.092 159.813 1.00 0.00 ATOM 7208 O THR 458 119.836 -0.928 160.667 1.00 0.00 ATOM 7219 N PRO 459 119.549 1.236 160.101 1.00 0.00 ATOM 7220 CA PRO 459 119.843 1.796 161.413 1.00 0.00 ATOM 7221 C PRO 459 118.794 1.436 162.466 1.00 0.00 ATOM 7222 O PRO 459 119.081 1.391 163.664 1.00 0.00 ATOM 7233 N LYS 460 117.585 1.155 161.995 1.00 0.00 ATOM 7234 CA LYS 460 116.437 0.779 162.807 1.00 0.00 ATOM 7235 C LYS 460 115.651 -0.258 162.031 1.00 0.00 ATOM 7236 O LYS 460 115.651 -0.222 160.809 1.00 0.00 ATOM 7255 N GLY 461 114.925 -1.135 162.715 1.00 0.00 ATOM 7256 CA GLY 461 114.122 -2.142 162.014 1.00 0.00 ATOM 7257 C GLY 461 112.908 -1.581 161.256 1.00 0.00 ATOM 7258 O GLY 461 112.325 -2.279 160.423 1.00 0.00 ATOM 7262 N ARG 462 112.535 -0.329 161.537 1.00 0.00 ATOM 7263 CA ARG 462 111.393 0.331 160.899 1.00 0.00 ATOM 7264 C ARG 462 111.775 0.778 159.504 1.00 0.00 ATOM 7265 O ARG 462 112.955 0.835 159.178 1.00 0.00 ATOM 7286 N SER 463 110.790 1.061 158.658 1.00 0.00 ATOM 7287 CA SER 463 111.128 1.633 157.357 1.00 0.00 ATOM 7288 C SER 463 111.741 3.025 157.569 1.00 0.00 ATOM 7289 O SER 463 111.291 3.774 158.451 1.00 0.00 ATOM 7297 N ILE 464 112.751 3.359 156.758 1.00 0.00 ATOM 7298 CA ILE 464 113.457 4.646 156.846 1.00 0.00 ATOM 7299 C ILE 464 113.731 5.240 155.451 1.00 0.00 ATOM 7300 O ILE 464 113.603 4.549 154.435 1.00 0.00 ATOM 7316 N ARG 465 114.119 6.519 155.393 1.00 0.00 ATOM 7317 CA ARG 465 114.497 7.130 154.102 1.00 0.00 ATOM 7318 C ARG 465 115.492 8.275 154.264 1.00 0.00 ATOM 7319 O ARG 465 115.683 8.782 155.364 1.00 0.00 ATOM 7340 N GLY 466 116.130 8.702 153.179 1.00 0.00 ATOM 7341 CA GLY 466 117.061 9.825 153.300 1.00 0.00 ATOM 7342 C GLY 466 118.040 9.938 152.139 1.00 0.00 ATOM 7343 O GLY 466 117.673 9.685 150.986 1.00 0.00 ATOM 7347 N THR 467 119.256 10.429 152.432 1.00 0.00 ATOM 7348 CA THR 467 120.265 10.635 151.383 1.00 0.00 ATOM 7349 C THR 467 121.652 10.098 151.765 1.00 0.00 ATOM 7350 O THR 467 122.005 10.024 152.948 1.00 0.00 ATOM 7361 N ILE 468 122.440 9.753 150.750 1.00 0.00 ATOM 7362 CA ILE 468 123.799 9.268 150.946 1.00 0.00 ATOM 7363 C ILE 468 124.824 10.235 150.380 1.00 0.00 ATOM 7364 O ILE 468 124.719 10.644 149.222 1.00 0.00 ATOM 7380 N GLN 469 125.835 10.577 151.183 1.00 0.00 ATOM 7381 CA GLN 469 126.922 11.434 150.714 1.00 0.00 ATOM 7382 C GLN 469 128.205 10.602 150.682 1.00 0.00 ATOM 7383 O GLN 469 128.646 10.080 151.710 1.00 0.00 ATOM 7397 N VAL 470 128.805 10.461 149.504 1.00 0.00 ATOM 7398 CA VAL 470 129.986 9.619 149.368 1.00 0.00 ATOM 7399 C VAL 470 131.239 10.427 149.071 1.00 0.00 ATOM 7400 O VAL 470 131.262 11.290 148.184 1.00 0.00 ATOM 7413 N ASP 471 132.278 10.158 149.838 1.00 0.00 ATOM 7414 CA ASP 471 133.559 10.780 149.628 1.00 0.00 ATOM 7415 C ASP 471 134.404 9.819 148.778 1.00 0.00 ATOM 7416 O ASP 471 134.665 8.678 149.177 1.00 0.00 ATOM 7425 N TYR 472 134.801 10.275 147.594 1.00 0.00 ATOM 7426 CA TYR 472 135.481 9.462 146.584 1.00 0.00 ATOM 7427 C TYR 472 136.708 10.198 146.026 1.00 0.00 ATOM 7428 O TYR 472 136.963 11.346 146.397 1.00 0.00 ATOM 7446 N ASP 473 137.533 9.490 145.251 1.00 0.00 ATOM 7447 CA ASP 473 138.787 10.055 144.742 1.00 0.00 ATOM 7448 C ASP 473 138.619 10.813 143.418 1.00 0.00 ATOM 7449 O ASP 473 137.507 11.094 142.984 1.00 0.00 ATOM 7458 N LYS 474 139.734 11.150 142.776 1.00 0.00 ATOM 7459 CA LYS 474 139.757 11.977 141.572 1.00 0.00 ATOM 7460 C LYS 474 139.499 11.274 140.221 1.00 0.00 ATOM 7461 O LYS 474 139.535 11.943 139.184 1.00 0.00 ATOM 7480 N GLY 475 139.262 9.956 140.205 1.00 0.00 ATOM 7481 CA GLY 475 139.020 9.270 138.924 1.00 0.00 ATOM 7482 C GLY 475 140.093 8.229 138.522 1.00 0.00 ATOM 7483 O GLY 475 141.252 8.597 138.321 1.00 0.00 ATOM 7487 N ASP 476 139.726 6.932 138.360 1.00 0.00 ATOM 7488 CA ASP 476 138.393 6.347 138.608 1.00 0.00 ATOM 7489 C ASP 476 137.976 6.618 140.041 1.00 0.00 ATOM 7490 O ASP 476 138.753 6.313 140.920 1.00 0.00 ATOM 7499 N PRO 477 136.737 7.090 140.322 1.00 0.00 ATOM 7500 CA PRO 477 136.231 7.465 141.631 1.00 0.00 ATOM 7501 C PRO 477 136.547 6.498 142.771 1.00 0.00 ATOM 7502 O PRO 477 136.579 6.909 143.942 1.00 0.00 ATOM 7513 N TYR 478 136.725 5.197 142.484 1.00 0.00 ATOM 7514 CA TYR 478 136.980 4.309 143.605 1.00 0.00 ATOM 7515 C TYR 478 138.226 3.421 143.454 1.00 0.00 ATOM 7516 O TYR 478 138.116 2.190 143.439 1.00 0.00 ATOM 7534 N ARG 479 139.427 4.036 143.420 1.00 0.00 ATOM 7535 CA ARG 479 140.691 3.278 143.382 1.00 0.00 ATOM 7536 C ARG 479 141.224 3.052 144.799 1.00 0.00 ATOM 7537 O ARG 479 142.259 2.415 145.008 1.00 0.00 ATOM 7558 N ALA 480 140.490 3.592 145.758 1.00 0.00 ATOM 7559 CA ALA 480 140.806 3.551 147.175 1.00 0.00 ATOM 7560 C ALA 480 139.507 3.503 147.955 1.00 0.00 ATOM 7561 O ALA 480 138.445 3.820 147.422 1.00 0.00 ATOM 7568 N ASN 481 139.570 3.096 149.206 1.00 0.00 ATOM 7569 CA ASN 481 138.354 3.017 149.999 1.00 0.00 ATOM 7570 C ASN 481 137.621 4.355 150.116 1.00 0.00 ATOM 7571 O ASN 481 138.219 5.387 150.425 1.00 0.00 ATOM 7582 N LYS 482 136.315 4.301 149.861 1.00 0.00 ATOM 7583 CA LYS 482 135.397 5.431 149.967 1.00 0.00 ATOM 7584 C LYS 482 134.933 5.593 151.394 1.00 0.00 ATOM 7585 O LYS 482 135.033 4.659 152.181 1.00 0.00 ATOM 7604 N PHE 483 134.415 6.765 151.716 1.00 0.00 ATOM 7605 CA PHE 483 133.807 6.979 153.028 1.00 0.00 ATOM 7606 C PHE 483 132.363 7.369 152.781 1.00 0.00 ATOM 7607 O PHE 483 132.081 8.072 151.812 1.00 0.00 ATOM 7624 N VAL 484 131.436 6.908 153.614 1.00 0.00 ATOM 7625 CA VAL 484 130.045 7.286 153.305 1.00 0.00 ATOM 7626 C VAL 484 129.253 7.776 154.505 1.00 0.00 ATOM 7627 O VAL 484 129.270 7.154 155.562 1.00 0.00 ATOM 7640 N LYS 485 128.533 8.884 154.325 1.00 0.00 ATOM 7641 CA LYS 485 127.587 9.370 155.327 1.00 0.00 ATOM 7642 C LYS 485 126.195 8.914 154.894 1.00 0.00 ATOM 7643 O LYS 485 125.737 9.251 153.798 1.00 0.00 ATOM 7662 N LEU 486 125.504 8.149 155.735 1.00 0.00 ATOM 7663 CA LEU 486 124.193 7.661 155.333 1.00 0.00 ATOM 7664 C LEU 486 123.116 8.311 156.195 1.00 0.00 ATOM 7665 O LEU 486 122.994 8.020 157.389 1.00 0.00 ATOM 7681 N LEU 487 122.345 9.216 155.599 1.00 0.00 ATOM 7682 CA LEU 487 121.356 9.990 156.342 1.00 0.00 ATOM 7683 C LEU 487 119.969 9.392 156.231 1.00 0.00 ATOM 7684 O LEU 487 119.432 9.283 155.129 1.00 0.00 ATOM 7700 N PHE 488 119.363 9.055 157.371 1.00 0.00 ATOM 7701 CA PHE 488 118.052 8.425 157.368 1.00 0.00 ATOM 7702 C PHE 488 117.037 9.191 158.210 1.00 0.00 ATOM 7703 O PHE 488 117.371 9.768 159.246 1.00 0.00 ATOM 7720 N THR 489 115.779 9.112 157.818 1.00 0.00 ATOM 7721 CA THR 489 114.684 9.596 158.639 1.00 0.00 ATOM 7722 C THR 489 113.726 8.427 158.819 1.00 0.00 ATOM 7723 O THR 489 113.387 7.730 157.853 1.00 0.00 ATOM 7734 N ASP 490 113.321 8.173 160.056 1.00 0.00 ATOM 7735 CA ASP 490 112.438 7.050 160.332 1.00 0.00 ATOM 7736 C ASP 490 110.980 7.361 160.030 1.00 0.00 ATOM 7737 O ASP 490 110.592 8.513 159.835 1.00 0.00 ATOM 7746 N THR 491 110.164 6.320 160.078 1.00 0.00 ATOM 7747 CA THR 491 108.723 6.359 159.872 1.00 0.00 ATOM 7748 C THR 491 108.074 7.314 160.857 1.00 0.00 ATOM 7749 O THR 491 107.123 8.024 160.533 1.00 0.00 ATOM 7760 N GLU 492 108.600 7.305 162.072 1.00 0.00 ATOM 7761 CA GLU 492 108.101 8.110 163.169 1.00 0.00 ATOM 7762 C GLU 492 108.707 9.532 163.211 1.00 0.00 ATOM 7763 O GLU 492 108.469 10.280 164.162 1.00 0.00 ATOM 7775 N GLY 493 109.505 9.901 162.189 1.00 0.00 ATOM 7776 CA GLY 493 110.078 11.246 162.075 1.00 0.00 ATOM 7777 C GLY 493 111.418 11.536 162.760 1.00 0.00 ATOM 7778 O GLY 493 111.834 12.693 162.804 1.00 0.00 ATOM 7782 N ILE 494 112.102 10.526 163.281 1.00 0.00 ATOM 7783 CA ILE 494 113.375 10.782 163.958 1.00 0.00 ATOM 7784 C ILE 494 114.592 10.554 163.034 1.00 0.00 ATOM 7785 O ILE 494 114.613 9.560 162.306 1.00 0.00 ATOM 7801 N PRO 495 115.498 11.545 162.860 1.00 0.00 ATOM 7802 CA PRO 495 116.764 11.436 162.139 1.00 0.00 ATOM 7803 C PRO 495 117.755 10.419 162.729 1.00 0.00 ATOM 7804 O PRO 495 117.952 10.358 163.950 1.00 0.00 ATOM 7815 N TYR 496 118.426 9.689 161.828 1.00 0.00 ATOM 7816 CA TYR 496 119.481 8.723 162.164 1.00 0.00 ATOM 7817 C TYR 496 120.662 8.793 161.169 1.00 0.00 ATOM 7818 O TYR 496 120.460 9.087 159.983 1.00 0.00 ATOM 7836 N THR 497 121.895 8.528 161.618 1.00 0.00 ATOM 7837 CA THR 497 122.990 8.523 160.635 1.00 0.00 ATOM 7838 C THR 497 124.014 7.388 160.778 1.00 0.00 ATOM 7839 O THR 497 124.545 7.134 161.862 1.00 0.00 ATOM 7850 N LEU 498 124.308 6.721 159.661 1.00 0.00 ATOM 7851 CA LEU 498 125.340 5.671 159.589 1.00 0.00 ATOM 7852 C LEU 498 126.534 6.170 158.812 1.00 0.00 ATOM 7853 O LEU 498 126.388 7.024 157.935 1.00 0.00 ATOM 7869 N TYR 499 127.721 5.639 159.096 1.00 0.00 ATOM 7870 CA TYR 499 128.840 6.003 158.225 1.00 0.00 ATOM 7871 C TYR 499 129.557 4.786 157.663 1.00 0.00 ATOM 7872 O TYR 499 129.722 3.774 158.346 1.00 0.00 ATOM 7890 N TYR 500 130.010 4.894 156.415 1.00 0.00 ATOM 7891 CA TYR 500 130.814 3.833 155.809 1.00 0.00 ATOM 7892 C TYR 500 132.263 4.072 156.155 1.00 0.00 ATOM 7893 O TYR 500 132.818 5.152 155.899 1.00 0.00 ATOM 7911 N GLY 501 132.864 3.052 156.738 1.00 0.00 ATOM 7912 CA GLY 501 134.212 3.079 157.271 1.00 0.00 ATOM 7913 C GLY 501 135.275 2.967 156.209 1.00 0.00 ATOM 7914 O GLY 501 135.967 1.948 156.124 1.00 0.00 ATOM 7918 N GLY 502 135.461 4.038 155.450 1.00 0.00 ATOM 7919 CA GLY 502 136.447 4.081 154.364 1.00 0.00 ATOM 7920 C GLY 502 137.881 3.790 154.823 1.00 0.00 ATOM 7921 O GLY 502 138.741 3.445 154.020 1.00 0.00 ATOM 7925 N TYR 503 138.149 3.890 156.120 1.00 0.00 ATOM 7926 CA TYR 503 139.481 3.599 156.622 1.00 0.00 ATOM 7927 C TYR 503 139.786 2.092 156.576 1.00 0.00 ATOM 7928 O TYR 503 140.954 1.693 156.555 1.00 0.00 ATOM 7946 N ASN 504 138.739 1.255 156.615 1.00 0.00 ATOM 7947 CA ASN 504 138.908 -0.198 156.596 1.00 0.00 ATOM 7948 C ASN 504 137.768 -0.949 155.883 1.00 0.00 ATOM 7949 O ASN 504 137.656 -2.168 156.015 1.00 0.00 ATOM 7960 N GLN 505 136.950 -0.229 155.110 1.00 0.00 ATOM 7961 CA GLN 505 135.772 -0.770 154.404 1.00 0.00 ATOM 7962 C GLN 505 134.749 -1.399 155.357 1.00 0.00 ATOM 7963 O GLN 505 134.107 -2.407 155.032 1.00 0.00 ATOM 7977 N GLY 506 134.594 -0.775 156.523 1.00 0.00 ATOM 7978 CA GLY 506 133.665 -1.205 157.563 1.00 0.00 ATOM 7979 C GLY 506 132.534 -0.203 157.721 1.00 0.00 ATOM 7980 O GLY 506 132.051 0.377 156.748 1.00 0.00 ATOM 7984 N TRP 507 132.092 0.017 158.947 1.00 0.00 ATOM 7985 CA TRP 507 131.016 0.972 159.160 1.00 0.00 ATOM 7986 C TRP 507 131.112 1.532 160.569 1.00 0.00 ATOM 7987 O TRP 507 131.744 0.929 161.443 1.00 0.00 ATOM 8008 N LYS 508 130.516 2.693 160.788 1.00 0.00 ATOM 8009 CA LYS 508 130.527 3.279 162.112 1.00 0.00 ATOM 8010 C LYS 508 129.132 3.206 162.733 1.00 0.00 ATOM 8011 O LYS 508 128.142 3.450 162.022 1.00 0.00 ATOM 8030 N PRO 509 129.034 3.007 164.071 1.00 0.00 ATOM 8031 CA PRO 509 127.819 2.940 164.876 1.00 0.00 ATOM 8032 C PRO 509 126.915 4.130 164.660 1.00 0.00 ATOM 8033 O PRO 509 127.380 5.261 164.484 1.00 0.00 ATOM 8044 N LEU 510 125.623 3.841 164.680 1.00 0.00 ATOM 8045 CA LEU 510 124.545 4.783 164.416 1.00 0.00 ATOM 8046 C LEU 510 124.470 5.991 165.337 1.00 0.00 ATOM 8047 O LEU 510 124.488 5.855 166.562 1.00 0.00 ATOM 8063 N LYS 511 124.340 7.172 164.732 1.00 0.00 ATOM 8064 CA LYS 511 124.139 8.406 165.476 1.00 0.00 ATOM 8065 C LYS 511 122.657 8.722 165.401 1.00 0.00 ATOM 8066 O LYS 511 121.986 8.321 164.447 1.00 0.00 ATOM 8085 N GLN 512 122.133 9.463 166.366 1.00 0.00 ATOM 8086 CA GLN 512 120.708 9.777 166.312 1.00 0.00 ATOM 8087 C GLN 512 120.361 11.110 166.932 1.00 0.00 ATOM 8088 O GLN 512 121.083 11.606 167.801 1.00 0.00 ATOM 8102 N SER 513 119.229 11.670 166.512 1.00 0.00 ATOM 8103 CA SER 513 118.765 12.914 167.105 1.00 0.00 ATOM 8104 C SER 513 117.279 12.881 167.391 1.00 0.00 ATOM 8105 O SER 513 116.455 12.907 166.488 1.00 0.00 TER END