####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS122_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 23 - 42 4.85 23.28 LONGEST_CONTINUOUS_SEGMENT: 20 24 - 43 4.82 24.12 LONGEST_CONTINUOUS_SEGMENT: 20 25 - 44 5.00 25.60 LCS_AVERAGE: 43.80 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.60 16.11 LCS_AVERAGE: 24.12 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 0.75 29.53 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.63 16.68 LCS_AVERAGE: 15.86 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 13 3 3 3 3 4 4 6 8 8 10 12 14 17 18 18 20 22 22 26 27 LCS_GDT V 3 V 3 3 7 18 3 3 4 4 7 7 7 8 8 10 11 14 17 18 18 21 22 22 23 24 LCS_GDT Q 4 Q 4 4 7 18 3 4 5 6 7 7 7 8 8 10 12 14 17 18 18 21 22 22 23 24 LCS_GDT G 5 G 5 5 7 19 0 4 5 6 7 11 11 12 13 14 15 16 17 18 19 21 22 24 26 27 LCS_GDT P 6 P 6 5 12 19 3 4 9 10 11 12 12 13 13 14 15 16 17 18 19 21 23 24 26 27 LCS_GDT W 7 W 7 5 12 19 3 4 5 6 7 12 12 13 13 14 15 16 17 18 19 21 23 24 26 27 LCS_GDT V 8 V 8 10 12 19 3 7 10 10 11 12 12 13 13 14 15 16 17 18 19 21 23 24 26 27 LCS_GDT G 9 G 9 10 12 19 8 9 10 10 11 12 12 13 13 14 15 16 17 18 19 21 23 24 26 27 LCS_GDT S 10 S 10 10 12 19 8 9 10 10 11 12 12 13 13 14 15 17 19 21 21 22 23 24 26 27 LCS_GDT S 11 S 11 10 12 19 8 9 10 10 11 12 12 13 13 14 15 16 18 21 21 22 23 24 26 27 LCS_GDT Y 12 Y 12 10 12 19 8 9 10 10 11 12 12 13 13 14 15 16 17 18 19 21 23 24 26 27 LCS_GDT V 13 V 13 10 12 19 8 9 10 10 11 12 12 13 13 14 15 18 19 21 21 22 23 24 26 27 LCS_GDT A 14 A 14 10 12 19 8 9 10 10 11 12 12 13 13 14 15 18 19 21 21 22 23 24 26 27 LCS_GDT E 15 E 15 10 12 19 8 9 10 10 11 12 12 13 13 14 15 16 16 18 19 21 22 23 25 25 LCS_GDT T 16 T 16 10 12 19 8 9 10 10 11 12 12 13 13 14 15 16 16 18 19 21 22 22 23 24 LCS_GDT G 17 G 17 10 12 19 4 9 10 10 11 12 12 13 13 14 15 16 16 19 21 22 23 24 26 27 LCS_GDT Q 18 Q 18 5 12 19 4 5 5 6 8 11 12 13 13 14 17 18 19 21 21 22 23 24 26 27 LCS_GDT N 19 N 19 5 11 19 4 5 5 6 10 12 14 15 15 15 17 18 19 21 21 22 23 24 26 27 LCS_GDT W 20 W 20 10 13 19 6 10 10 12 12 12 13 15 15 15 17 17 17 18 20 22 22 24 26 27 LCS_GDT A 21 A 21 10 13 19 6 10 10 12 12 12 14 15 15 15 17 17 18 21 21 22 23 24 26 27 LCS_GDT S 22 S 22 10 13 19 6 10 10 12 12 12 14 15 15 15 17 18 19 21 21 22 23 24 26 27 LCS_GDT L 23 L 23 10 13 20 6 10 10 12 12 12 14 15 15 15 17 18 19 21 21 22 23 24 26 27 LCS_GDT A 24 A 24 10 13 20 6 10 10 12 12 12 14 15 15 15 17 18 19 21 21 22 23 24 26 27 LCS_GDT A 25 A 25 10 13 20 6 10 10 12 12 12 14 15 15 15 17 18 19 21 21 22 23 24 26 27 LCS_GDT N 26 N 26 10 13 20 6 10 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT E 27 E 27 10 13 20 6 10 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT L 28 L 28 10 13 20 6 10 10 12 12 12 14 15 15 16 17 18 19 21 21 22 22 24 26 27 LCS_GDT R 29 R 29 10 13 20 4 10 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT V 30 V 30 3 13 20 3 3 5 6 8 12 14 15 15 16 17 18 19 21 21 22 22 24 25 27 LCS_GDT T 31 T 31 3 13 20 3 4 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT E 32 E 32 4 13 20 5 8 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT R 33 R 33 4 6 20 3 4 5 6 8 10 14 15 15 16 17 18 19 21 21 22 23 24 26 27 LCS_GDT P 34 P 34 4 6 20 2 4 5 6 8 10 11 12 14 16 17 18 19 21 21 22 22 24 26 27 LCS_GDT F 35 F 35 4 7 20 3 4 5 6 8 10 11 12 14 16 17 18 19 21 21 22 22 24 25 25 LCS_GDT W 36 W 36 5 9 20 3 4 6 8 8 10 11 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT I 37 I 37 5 9 20 3 4 6 8 8 9 10 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT S 38 S 38 5 9 20 4 4 6 8 8 9 10 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT S 39 S 39 5 9 20 4 4 6 8 8 10 11 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT F 40 F 40 5 9 20 4 4 6 8 8 9 10 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT I 41 I 41 5 9 20 4 4 5 8 8 9 10 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT G 42 G 42 5 9 20 3 4 5 8 8 9 10 12 14 16 17 17 18 19 20 22 22 24 24 25 LCS_GDT R 43 R 43 5 9 20 3 4 6 8 8 9 10 11 13 15 15 16 17 18 20 22 22 24 24 25 LCS_GDT S 44 S 44 5 9 20 3 4 5 6 6 9 10 10 11 12 14 15 15 16 17 18 18 20 21 23 LCS_GDT K 45 K 45 5 6 17 3 3 5 5 5 9 10 10 10 10 10 11 11 11 12 12 16 16 16 16 LCS_AVERAGE LCS_A: 27.93 ( 15.86 24.12 43.80 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 10 10 12 12 12 14 15 15 16 17 18 19 21 21 22 23 24 26 27 GDT PERCENT_AT 18.18 22.73 22.73 27.27 27.27 27.27 31.82 34.09 34.09 36.36 38.64 40.91 43.18 47.73 47.73 50.00 52.27 54.55 59.09 61.36 GDT RMS_LOCAL 0.25 0.63 0.63 1.14 1.14 1.14 2.44 2.49 2.49 3.61 3.58 4.61 4.75 5.07 5.07 5.21 6.52 6.09 6.82 6.93 GDT RMS_ALL_AT 29.47 16.68 16.68 16.07 16.07 16.07 15.38 15.58 15.58 25.58 15.48 14.31 14.25 14.33 14.33 14.38 15.56 21.46 15.67 15.09 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 25.688 0 0.435 0.476 25.862 0.000 0.000 - LGA V 3 V 3 26.596 0 0.024 0.151 27.647 0.000 0.000 27.647 LGA Q 4 Q 4 26.697 0 0.568 0.858 33.781 0.000 0.000 31.657 LGA G 5 G 5 22.353 0 0.512 0.512 24.383 0.000 0.000 - LGA P 6 P 6 21.901 0 0.052 0.411 23.151 0.000 0.000 22.680 LGA W 7 W 7 19.722 0 0.156 0.240 22.671 0.000 0.000 21.311 LGA V 8 V 8 17.711 0 0.623 1.271 18.429 0.000 0.000 17.742 LGA G 9 G 9 14.185 0 0.148 0.148 15.216 0.000 0.000 - LGA S 10 S 10 10.971 0 0.043 0.690 13.387 0.000 0.000 9.185 LGA S 11 S 11 16.968 0 0.034 0.036 20.561 0.000 0.000 20.561 LGA Y 12 Y 12 18.569 0 0.080 1.106 19.724 0.000 0.000 19.408 LGA V 13 V 13 13.904 0 0.063 0.743 15.419 0.000 0.000 11.678 LGA A 14 A 14 16.750 0 0.026 0.025 19.879 0.000 0.000 - LGA E 15 E 15 22.115 0 0.044 1.165 28.797 0.000 0.000 28.797 LGA T 16 T 16 21.085 0 0.140 0.243 22.186 0.000 0.000 17.961 LGA G 17 G 17 16.833 0 0.604 0.604 18.079 0.000 0.000 - LGA Q 18 Q 18 9.556 0 0.038 1.195 13.186 0.000 0.000 12.514 LGA N 19 N 19 4.536 0 0.060 0.949 5.616 8.636 6.364 5.311 LGA W 20 W 20 2.754 0 0.639 0.866 7.892 42.273 12.078 7.585 LGA A 21 A 21 1.902 0 0.030 0.030 2.251 47.727 45.818 - LGA S 22 S 22 2.125 0 0.024 0.653 2.568 44.545 47.879 0.695 LGA L 23 L 23 1.900 0 0.051 0.335 4.119 58.182 38.182 3.523 LGA A 24 A 24 1.244 0 0.023 0.025 1.423 69.545 68.727 - LGA A 25 A 25 1.234 0 0.057 0.057 1.905 61.818 59.636 - LGA N 26 N 26 1.396 0 0.034 1.152 2.084 61.818 64.545 2.084 LGA E 27 E 27 1.232 0 0.099 0.811 3.426 62.727 47.879 3.426 LGA L 28 L 28 0.468 0 0.222 0.361 1.002 95.455 88.864 0.930 LGA R 29 R 29 2.662 0 0.585 1.537 12.999 46.364 16.860 12.409 LGA V 30 V 30 3.812 0 0.587 1.316 8.454 19.545 11.169 6.615 LGA T 31 T 31 1.356 0 0.697 1.265 3.686 63.636 46.753 3.652 LGA E 32 E 32 1.999 0 0.521 1.120 10.407 55.455 24.848 10.407 LGA R 33 R 33 4.304 0 0.671 1.632 14.820 14.091 5.124 14.820 LGA P 34 P 34 9.524 0 0.580 0.638 11.238 0.000 0.000 10.554 LGA F 35 F 35 9.339 0 0.605 0.683 13.767 0.000 0.000 10.518 LGA W 36 W 36 13.222 0 0.622 1.084 17.966 0.000 0.000 16.801 LGA I 37 I 37 18.467 0 0.099 1.561 21.556 0.000 0.000 21.156 LGA S 38 S 38 19.082 0 0.107 0.130 19.099 0.000 0.000 16.915 LGA S 39 S 39 14.142 0 0.156 0.231 15.521 0.000 0.000 11.303 LGA F 40 F 40 17.487 0 0.045 1.514 22.581 0.000 0.000 22.581 LGA I 41 I 41 22.210 0 0.625 1.414 27.341 0.000 0.000 27.341 LGA G 42 G 42 20.930 0 0.349 0.349 21.278 0.000 0.000 - LGA R 43 R 43 19.180 0 0.671 1.254 22.603 0.000 0.000 16.576 LGA S 44 S 44 23.002 0 0.082 0.110 23.516 0.000 0.000 22.751 LGA K 45 K 45 26.534 0 0.137 0.885 32.960 0.000 0.000 32.960 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 14.088 14.022 14.752 17.087 13.289 6.909 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.49 33.523 30.642 0.580 LGA_LOCAL RMSD: 2.485 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.585 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 14.088 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.307082 * X + -0.101398 * Y + -0.946266 * Z + -4.803210 Y_new = -0.532390 * X + -0.805863 * Y + 0.259124 * Z + 27.815332 Z_new = -0.788835 * X + 0.583355 * Y + 0.193483 * Z + 35.940914 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.093981 0.908912 1.250542 [DEG: -119.9763 52.0768 71.6508 ] ZXZ: -1.838082 1.376086 -0.934040 [DEG: -105.3143 78.8439 -53.5165 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS122_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS122_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.49 30.642 14.09 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS122_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 PARENT N/A ATOM 1098 N ALA 2 2.053 21.693 -6.156 1.00 17.95 N ATOM 1100 CA ALA 2 2.735 22.712 -6.974 1.00 18.24 C ATOM 1101 CB ALA 2 4.107 23.085 -6.357 1.00 17.94 C ATOM 1102 C ALA 2 2.904 22.114 -8.385 1.00 18.52 C ATOM 1103 O ALA 2 4.026 22.000 -8.904 1.00 18.82 O ATOM 1104 N VAL 3 1.767 21.742 -8.990 1.00 18.49 N ATOM 1106 CA VAL 3 1.692 21.126 -10.333 1.00 18.83 C ATOM 1107 CB VAL 3 0.499 20.085 -10.429 1.00 18.52 C ATOM 1108 CG1 VAL 3 0.689 19.128 -11.621 1.00 18.94 C ATOM 1109 CG2 VAL 3 0.374 19.274 -9.138 1.00 18.05 C ATOM 1110 C VAL 3 1.571 22.207 -11.436 1.00 19.16 C ATOM 1111 O VAL 3 0.743 23.122 -11.329 1.00 18.94 O ATOM 1112 N GLN 4 2.433 22.085 -12.465 1.00 19.75 N ATOM 1114 CA GLN 4 2.549 22.966 -13.663 1.00 20.21 C ATOM 1115 CB GLN 4 1.680 22.447 -14.829 1.00 20.22 C ATOM 1116 CG GLN 4 2.149 21.129 -15.436 1.00 20.01 C ATOM 1117 CD GLN 4 1.263 20.664 -16.576 1.00 20.13 C ATOM 1118 OE1 GLN 4 0.299 19.927 -16.367 1.00 20.60 O ATOM 1119 NE2 GLN 4 1.587 21.092 -17.791 1.00 19.80 N ATOM 1122 C GLN 4 2.363 24.489 -13.494 1.00 20.10 C ATOM 1123 O GLN 4 3.309 25.255 -13.711 1.00 20.40 O ATOM 1124 N GLY 5 1.150 24.903 -13.111 1.00 19.74 N ATOM 1126 CA GLY 5 0.828 26.308 -12.912 1.00 19.71 C ATOM 1127 C GLY 5 -0.637 26.477 -12.522 1.00 19.21 C ATOM 1128 O GLY 5 -0.886 26.954 -11.408 1.00 18.99 O ATOM 1129 N PRO 6 -1.631 26.108 -13.389 1.00 19.13 N ATOM 1130 CD PRO 6 -1.470 25.722 -14.810 1.00 19.68 C ATOM 1131 CA PRO 6 -3.071 26.238 -13.081 1.00 18.65 C ATOM 1132 CB PRO 6 -3.739 25.823 -14.395 1.00 19.01 C ATOM 1133 CG PRO 6 -2.748 26.228 -15.424 1.00 19.76 C ATOM 1134 C PRO 6 -3.570 25.361 -11.911 1.00 17.83 C ATOM 1135 O PRO 6 -4.616 25.658 -11.316 1.00 17.55 O ATOM 1136 N TRP 7 -2.807 24.307 -11.591 1.00 17.56 N ATOM 1138 CA TRP 7 -3.123 23.358 -10.507 1.00 16.85 C ATOM 1139 CB TRP 7 -2.905 21.897 -10.978 1.00 16.79 C ATOM 1140 CG TRP 7 -3.796 21.419 -12.149 1.00 16.80 C ATOM 1141 CD2 TRP 7 -5.117 20.836 -12.070 1.00 16.98 C ATOM 1142 CE2 TRP 7 -5.515 20.520 -13.401 1.00 17.07 C ATOM 1143 CE3 TRP 7 -6.005 20.547 -11.007 1.00 17.22 C ATOM 1144 CD1 TRP 7 -3.470 21.428 -13.486 1.00 16.80 C ATOM 1145 NE1 TRP 7 -4.492 20.893 -14.233 1.00 16.96 N ATOM 1147 CZ2 TRP 7 -6.766 19.929 -13.704 1.00 17.37 C ATOM 1148 CZ3 TRP 7 -7.258 19.955 -11.308 1.00 17.52 C ATOM 1149 CH2 TRP 7 -7.620 19.655 -12.650 1.00 17.59 C ATOM 1150 C TRP 7 -2.329 23.640 -9.213 1.00 16.63 C ATOM 1151 O TRP 7 -1.193 23.166 -9.046 1.00 17.28 O ATOM 1152 N VAL 8 -2.921 24.467 -8.339 1.00 15.80 N ATOM 1154 CA VAL 8 -2.344 24.858 -7.036 1.00 15.54 C ATOM 1155 CB VAL 8 -1.753 26.331 -7.028 1.00 15.33 C ATOM 1156 CG1 VAL 8 -0.302 26.304 -7.482 1.00 15.61 C ATOM 1157 CG2 VAL 8 -2.556 27.273 -7.945 1.00 15.25 C ATOM 1158 C VAL 8 -3.337 24.644 -5.875 1.00 14.79 C ATOM 1159 O VAL 8 -4.418 25.250 -5.844 1.00 14.62 O ATOM 1160 N GLY 9 -2.977 23.723 -4.971 1.00 14.49 N ATOM 1162 CA GLY 9 -3.778 23.377 -3.797 1.00 13.84 C ATOM 1163 C GLY 9 -3.860 24.472 -2.747 1.00 13.42 C ATOM 1164 O GLY 9 -4.900 24.654 -2.098 1.00 12.86 O ATOM 1165 N SER 10 -2.742 25.194 -2.602 1.00 13.81 N ATOM 1167 CA SER 10 -2.559 26.321 -1.672 1.00 13.64 C ATOM 1168 CB SER 10 -1.140 26.875 -1.808 1.00 14.42 C ATOM 1169 OG SER 10 -0.854 27.845 -0.811 1.00 15.09 O ATOM 1171 C SER 10 -3.597 27.415 -1.981 1.00 13.34 C ATOM 1172 O SER 10 -4.069 28.112 -1.074 1.00 12.82 O ATOM 1173 N SER 11 -3.927 27.536 -3.276 1.00 13.76 N ATOM 1175 CA SER 11 -4.910 28.488 -3.827 1.00 13.72 C ATOM 1176 CB SER 11 -4.873 28.425 -5.356 1.00 14.56 C ATOM 1177 OG SER 11 -5.643 29.461 -5.945 1.00 14.68 O ATOM 1179 C SER 11 -6.334 28.161 -3.341 1.00 13.01 C ATOM 1180 O SER 11 -7.118 29.073 -3.056 1.00 12.72 O ATOM 1181 N TYR 12 -6.638 26.856 -3.242 1.00 12.84 N ATOM 1183 CA TYR 12 -7.941 26.332 -2.792 1.00 12.32 C ATOM 1184 CB TYR 12 -8.047 24.822 -3.111 1.00 12.54 C ATOM 1185 CG TYR 12 -8.414 24.469 -4.559 1.00 12.36 C ATOM 1186 CD1 TYR 12 -9.713 24.010 -4.884 1.00 12.41 C ATOM 1187 CE1 TYR 12 -10.059 23.658 -6.219 1.00 12.46 C ATOM 1188 CD2 TYR 12 -7.465 24.568 -5.610 1.00 12.35 C ATOM 1189 CE2 TYR 12 -7.804 24.217 -6.947 1.00 12.42 C ATOM 1190 CZ TYR 12 -9.100 23.765 -7.238 1.00 12.47 C ATOM 1191 OH TYR 12 -9.430 23.426 -8.532 1.00 12.73 O ATOM 1193 C TYR 12 -8.216 26.598 -1.302 1.00 11.59 C ATOM 1194 O TYR 12 -9.311 27.059 -0.954 1.00 11.25 O ATOM 1195 N VAL 13 -7.217 26.328 -0.447 1.00 11.48 N ATOM 1197 CA VAL 13 -7.307 26.562 1.012 1.00 10.94 C ATOM 1198 CB VAL 13 -6.208 25.829 1.863 1.00 11.14 C ATOM 1199 CG1 VAL 13 -6.845 24.684 2.624 1.00 10.92 C ATOM 1200 CG2 VAL 13 -5.046 25.328 1.007 1.00 11.24 C ATOM 1201 C VAL 13 -7.330 28.059 1.372 1.00 10.74 C ATOM 1202 O VAL 13 -8.048 28.465 2.293 1.00 10.27 O ATOM 1203 N ALA 14 -6.572 28.864 0.612 1.00 11.23 N ATOM 1205 CA ALA 14 -6.465 30.326 0.789 1.00 11.29 C ATOM 1206 CB ALA 14 -5.320 30.876 -0.056 1.00 12.06 C ATOM 1207 C ALA 14 -7.776 31.065 0.457 1.00 11.16 C ATOM 1208 O ALA 14 -8.189 31.955 1.207 1.00 10.89 O ATOM 1209 N GLU 15 -8.408 30.683 -0.664 1.00 11.49 N ATOM 1211 CA GLU 15 -9.684 31.259 -1.145 1.00 11.63 C ATOM 1212 CB GLU 15 -9.938 30.875 -2.610 1.00 12.34 C ATOM 1213 CG GLU 15 -9.048 31.595 -3.618 1.00 13.13 C ATOM 1214 CD GLU 15 -9.335 31.184 -5.051 1.00 13.90 C ATOM 1215 OE1 GLU 15 -10.189 31.828 -5.696 1.00 14.27 O ATOM 1216 OE2 GLU 15 -8.704 30.219 -5.532 1.00 14.26 O ATOM 1217 C GLU 15 -10.914 30.904 -0.284 1.00 11.09 C ATOM 1218 O GLU 15 -11.717 31.788 0.034 1.00 11.10 O ATOM 1219 N THR 16 -11.047 29.617 0.077 1.00 10.78 N ATOM 1221 CA THR 16 -12.156 29.086 0.903 1.00 10.42 C ATOM 1222 CB THR 16 -12.242 27.530 0.828 1.00 10.43 C ATOM 1223 OG1 THR 16 -10.968 26.957 1.148 1.00 10.30 O ATOM 1225 CG2 THR 16 -12.674 27.075 -0.563 1.00 11.04 C ATOM 1226 C THR 16 -12.137 29.533 2.381 1.00 9.91 C ATOM 1227 O THR 16 -13.181 29.896 2.936 1.00 9.86 O ATOM 1228 N GLY 17 -10.944 29.513 2.986 1.00 9.69 N ATOM 1230 CA GLY 17 -10.767 29.902 4.378 1.00 9.37 C ATOM 1231 C GLY 17 -9.446 29.386 4.922 1.00 8.30 C ATOM 1232 O GLY 17 -9.132 28.202 4.752 1.00 7.62 O ATOM 1233 N GLN 18 -8.687 30.272 5.580 1.00 8.37 N ATOM 1235 CA GLN 18 -7.372 29.953 6.165 1.00 7.74 C ATOM 1236 CB GLN 18 -6.391 31.116 5.957 1.00 7.84 C ATOM 1237 CG GLN 18 -5.958 31.339 4.513 1.00 8.91 C ATOM 1238 CD GLN 18 -4.990 32.498 4.366 1.00 9.23 C ATOM 1239 OE1 GLN 18 -5.398 33.638 4.149 1.00 9.41 O ATOM 1240 NE2 GLN 18 -3.697 32.210 4.484 1.00 9.49 N ATOM 1243 C GLN 18 -7.434 29.592 7.659 1.00 6.96 C ATOM 1244 O GLN 18 -8.202 30.201 8.417 1.00 6.43 O ATOM 1245 N ASN 19 -6.636 28.590 8.053 1.00 7.08 N ATOM 1247 CA ASN 19 -6.540 28.102 9.442 1.00 6.70 C ATOM 1248 CB ASN 19 -6.821 26.580 9.528 1.00 7.40 C ATOM 1249 CG ASN 19 -6.034 25.756 8.500 1.00 7.77 C ATOM 1250 OD1 ASN 19 -6.493 25.537 7.377 1.00 7.89 O ATOM 1251 ND2 ASN 19 -4.855 25.286 8.895 1.00 8.08 N ATOM 1254 C ASN 19 -5.187 28.461 10.088 1.00 6.23 C ATOM 1255 O ASN 19 -5.150 28.910 11.239 1.00 5.85 O ATOM 1256 N TRP 20 -4.096 28.262 9.329 1.00 6.35 N ATOM 1258 CA TRP 20 -2.709 28.552 9.755 1.00 6.07 C ATOM 1259 CB TRP 20 -1.683 27.873 8.813 1.00 6.46 C ATOM 1260 CG TRP 20 -1.899 28.009 7.280 1.00 6.50 C ATOM 1261 CD2 TRP 20 -2.381 26.995 6.375 1.00 6.65 C ATOM 1262 CE2 TRP 20 -2.356 27.556 5.067 1.00 6.96 C ATOM 1263 CE3 TRP 20 -2.830 25.663 6.537 1.00 6.72 C ATOM 1264 CD1 TRP 20 -1.616 29.108 6.497 1.00 6.68 C ATOM 1265 NE1 TRP 20 -1.887 28.838 5.179 1.00 6.96 N ATOM 1267 CZ2 TRP 20 -2.764 26.834 3.919 1.00 7.38 C ATOM 1268 CZ3 TRP 20 -3.238 24.938 5.391 1.00 7.10 C ATOM 1269 CH2 TRP 20 -3.198 25.533 4.100 1.00 7.43 C ATOM 1270 C TRP 20 -2.386 30.052 9.916 1.00 5.78 C ATOM 1271 O TRP 20 -1.651 30.434 10.837 1.00 5.46 O ATOM 1272 N ALA 21 -2.955 30.876 9.023 1.00 5.95 N ATOM 1274 CA ALA 21 -2.782 32.344 8.998 1.00 5.74 C ATOM 1275 CB ALA 21 -3.341 32.915 7.701 1.00 6.11 C ATOM 1276 C ALA 21 -3.431 33.039 10.206 1.00 5.41 C ATOM 1277 O ALA 21 -2.880 34.015 10.730 1.00 5.11 O ATOM 1278 N SER 22 -4.594 32.521 10.632 1.00 5.56 N ATOM 1280 CA SER 22 -5.372 33.029 11.781 1.00 5.43 C ATOM 1281 CB SER 22 -6.771 32.394 11.798 1.00 5.83 C ATOM 1282 OG SER 22 -7.616 33.001 12.762 1.00 6.01 O ATOM 1284 C SER 22 -4.652 32.777 13.123 1.00 5.08 C ATOM 1285 O SER 22 -4.651 33.651 13.998 1.00 4.90 O ATOM 1286 N LEU 23 -4.040 31.589 13.255 1.00 5.08 N ATOM 1288 CA LEU 23 -3.286 31.161 14.453 1.00 4.86 C ATOM 1289 CB LEU 23 -2.978 29.649 14.401 1.00 5.02 C ATOM 1290 CG LEU 23 -4.079 28.573 14.502 1.00 5.14 C ATOM 1291 CD1 LEU 23 -3.692 27.393 13.627 1.00 5.57 C ATOM 1292 CD2 LEU 23 -4.325 28.110 15.950 1.00 5.03 C ATOM 1293 C LEU 23 -1.981 31.955 14.649 1.00 4.67 C ATOM 1294 O LEU 23 -1.681 32.389 15.769 1.00 4.58 O ATOM 1295 N ALA 24 -1.246 32.167 13.546 1.00 4.74 N ATOM 1297 CA ALA 24 0.030 32.912 13.515 1.00 4.71 C ATOM 1298 CB ALA 24 0.720 32.719 12.169 1.00 4.98 C ATOM 1299 C ALA 24 -0.168 34.411 13.802 1.00 4.53 C ATOM 1300 O ALA 24 0.605 35.008 14.562 1.00 4.48 O ATOM 1301 N ALA 25 -1.230 34.983 13.215 1.00 4.53 N ATOM 1303 CA ALA 25 -1.617 36.400 13.362 1.00 4.44 C ATOM 1304 CB ALA 25 -2.691 36.761 12.343 1.00 4.61 C ATOM 1305 C ALA 25 -2.104 36.728 14.783 1.00 4.41 C ATOM 1306 O ALA 25 -1.834 37.820 15.296 1.00 4.39 O ATOM 1307 N ASN 26 -2.817 35.771 15.399 1.00 4.50 N ATOM 1309 CA ASN 26 -3.370 35.882 16.764 1.00 4.61 C ATOM 1310 CB ASN 26 -4.375 34.740 17.023 1.00 4.78 C ATOM 1311 CG ASN 26 -5.489 35.130 17.997 1.00 5.24 C ATOM 1312 OD1 ASN 26 -5.364 34.945 19.209 1.00 5.61 O ATOM 1313 ND2 ASN 26 -6.588 35.658 17.464 1.00 5.56 N ATOM 1316 C ASN 26 -2.270 35.895 17.850 1.00 4.66 C ATOM 1317 O ASN 26 -2.323 36.725 18.765 1.00 4.85 O ATOM 1318 N GLU 27 -1.294 34.978 17.738 1.00 4.62 N ATOM 1320 CA GLU 27 -0.163 34.860 18.685 1.00 4.80 C ATOM 1321 CB GLU 27 0.529 33.480 18.579 1.00 4.81 C ATOM 1322 CG GLU 27 1.086 33.068 17.205 1.00 5.48 C ATOM 1323 CD GLU 27 1.741 31.700 17.225 1.00 5.50 C ATOM 1324 OE1 GLU 27 1.035 30.698 16.980 1.00 5.54 O ATOM 1325 OE2 GLU 27 2.960 31.626 17.484 1.00 5.72 O ATOM 1326 C GLU 27 0.866 36.014 18.641 1.00 4.91 C ATOM 1327 O GLU 27 1.263 36.524 19.692 1.00 5.20 O ATOM 1328 N LEU 28 1.276 36.403 17.424 1.00 4.76 N ATOM 1330 CA LEU 28 2.250 37.490 17.175 1.00 4.91 C ATOM 1331 CB LEU 28 2.758 37.449 15.718 1.00 4.84 C ATOM 1332 CG LEU 28 3.671 36.327 15.179 1.00 4.81 C ATOM 1333 CD1 LEU 28 3.416 36.164 13.689 1.00 5.07 C ATOM 1334 CD2 LEU 28 5.167 36.593 15.435 1.00 5.45 C ATOM 1335 C LEU 28 1.738 38.905 17.505 1.00 4.95 C ATOM 1336 O LEU 28 2.502 39.738 18.007 1.00 5.25 O ATOM 1337 N ARG 29 0.450 39.150 17.224 1.00 4.74 N ATOM 1339 CA ARG 29 -0.225 40.443 17.462 1.00 4.84 C ATOM 1340 CB ARG 29 -1.101 40.819 16.256 1.00 4.65 C ATOM 1341 CG ARG 29 -0.324 41.122 14.972 1.00 4.34 C ATOM 1342 CD ARG 29 -1.242 41.350 13.773 1.00 4.33 C ATOM 1343 NE ARG 29 -1.988 42.610 13.854 1.00 4.23 N ATOM 1345 CZ ARG 29 -2.787 43.090 12.900 1.00 4.38 C ATOM 1346 NH1 ARG 29 -3.409 44.244 13.090 1.00 4.67 N ATOM 1349 NH2 ARG 29 -2.972 42.431 11.760 1.00 4.59 N ATOM 1352 C ARG 29 -1.077 40.405 18.746 1.00 5.17 C ATOM 1353 O ARG 29 -1.394 39.315 19.239 1.00 5.51 O ATOM 1354 N VAL 30 -1.436 41.588 19.269 1.00 5.22 N ATOM 1356 CA VAL 30 -2.244 41.744 20.497 1.00 5.68 C ATOM 1357 CB VAL 30 -1.761 43.022 21.343 1.00 6.16 C ATOM 1358 CG1 VAL 30 -1.931 44.339 20.565 1.00 7.01 C ATOM 1359 CG2 VAL 30 -2.431 43.081 22.727 1.00 6.25 C ATOM 1360 C VAL 30 -3.780 41.684 20.227 1.00 5.54 C ATOM 1361 O VAL 30 -4.450 40.764 20.712 1.00 5.96 O ATOM 1362 N THR 31 -4.303 42.657 19.464 1.00 5.21 N ATOM 1364 CA THR 31 -5.731 42.759 19.093 1.00 5.32 C ATOM 1365 CB THR 31 -6.490 43.897 19.928 1.00 5.50 C ATOM 1366 OG1 THR 31 -7.824 44.067 19.432 1.00 5.97 O ATOM 1368 CG2 THR 31 -5.748 45.239 19.912 1.00 5.24 C ATOM 1369 C THR 31 -5.854 42.931 17.555 1.00 5.50 C ATOM 1370 O THR 31 -4.832 42.894 16.859 1.00 5.78 O ATOM 1371 N GLU 32 -7.083 43.114 17.042 1.00 5.64 N ATOM 1373 CA GLU 32 -7.369 43.280 15.598 1.00 6.14 C ATOM 1374 CB GLU 32 -8.874 43.118 15.321 1.00 6.56 C ATOM 1375 CG GLU 32 -9.412 41.702 15.517 1.00 6.45 C ATOM 1376 CD GLU 32 -10.898 41.594 15.232 1.00 7.05 C ATOM 1377 OE1 GLU 32 -11.264 41.322 14.068 1.00 7.30 O ATOM 1378 OE2 GLU 32 -11.701 41.781 16.170 1.00 7.46 O ATOM 1379 C GLU 32 -6.834 44.588 14.968 1.00 6.37 C ATOM 1380 O GLU 32 -5.844 44.541 14.228 1.00 6.59 O ATOM 1381 N ARG 33 -7.481 45.726 15.259 1.00 6.54 N ATOM 1383 CA ARG 33 -7.076 47.049 14.742 1.00 6.87 C ATOM 1384 CB ARG 33 -8.172 47.709 13.867 1.00 7.31 C ATOM 1385 CG ARG 33 -9.647 47.451 14.245 1.00 8.04 C ATOM 1386 CD ARG 33 -10.618 48.160 13.303 1.00 8.74 C ATOM 1387 NE ARG 33 -10.597 49.619 13.455 1.00 8.84 N ATOM 1389 CZ ARG 33 -11.345 50.475 12.757 1.00 9.63 C ATOM 1390 NH1 ARG 33 -12.200 50.048 11.833 1.00 10.65 N ATOM 1393 NH2 ARG 33 -11.235 51.777 12.987 1.00 9.58 N ATOM 1396 C ARG 33 -6.500 48.045 15.790 1.00 6.91 C ATOM 1397 O ARG 33 -5.579 48.795 15.444 1.00 7.41 O ATOM 1398 N PRO 34 -7.025 48.087 17.062 1.00 6.66 N ATOM 1399 CD PRO 34 -8.298 47.538 17.607 1.00 7.30 C ATOM 1400 CA PRO 34 -6.437 49.046 18.028 1.00 6.20 C ATOM 1401 CB PRO 34 -7.584 49.260 19.029 1.00 6.69 C ATOM 1402 CG PRO 34 -8.266 47.929 19.063 1.00 7.11 C ATOM 1403 C PRO 34 -5.112 48.566 18.707 1.00 5.83 C ATOM 1404 O PRO 34 -4.853 48.882 19.878 1.00 5.74 O ATOM 1405 N PHE 35 -4.275 47.862 17.930 1.00 5.79 N ATOM 1407 CA PHE 35 -2.993 47.280 18.384 1.00 5.78 C ATOM 1408 CB PHE 35 -2.386 46.350 17.288 1.00 6.14 C ATOM 1409 CG PHE 35 -2.262 46.977 15.891 1.00 6.60 C ATOM 1410 CD1 PHE 35 -1.110 47.715 15.524 1.00 7.08 C ATOM 1411 CD2 PHE 35 -3.278 46.793 14.925 1.00 6.95 C ATOM 1412 CE1 PHE 35 -0.970 48.261 14.219 1.00 7.85 C ATOM 1413 CE2 PHE 35 -3.154 47.333 13.615 1.00 7.74 C ATOM 1414 CZ PHE 35 -1.996 48.069 13.261 1.00 8.18 C ATOM 1415 C PHE 35 -1.913 48.222 18.946 1.00 5.77 C ATOM 1416 O PHE 35 -1.357 47.939 20.011 1.00 5.79 O ATOM 1417 N TRP 36 -1.659 49.342 18.255 1.00 5.97 N ATOM 1419 CA TRP 36 -0.650 50.342 18.657 1.00 6.37 C ATOM 1420 CB TRP 36 -0.311 51.282 17.474 1.00 6.86 C ATOM 1421 CG TRP 36 -1.493 51.993 16.753 1.00 7.72 C ATOM 1422 CD2 TRP 36 -1.844 53.391 16.828 1.00 8.17 C ATOM 1423 CE2 TRP 36 -2.965 53.587 15.971 1.00 9.03 C ATOM 1424 CE3 TRP 36 -1.323 54.502 17.532 1.00 8.14 C ATOM 1425 CD1 TRP 36 -2.395 51.426 15.878 1.00 8.42 C ATOM 1426 NE1 TRP 36 -3.272 52.375 15.413 1.00 9.18 N ATOM 1428 CZ2 TRP 36 -3.580 54.851 15.797 1.00 9.73 C ATOM 1429 CZ3 TRP 36 -1.936 55.768 17.359 1.00 8.93 C ATOM 1430 CH2 TRP 36 -3.056 55.924 16.494 1.00 9.65 C ATOM 1431 C TRP 36 -0.984 51.130 19.943 1.00 6.34 C ATOM 1432 O TRP 36 -0.118 51.281 20.813 1.00 6.64 O ATOM 1433 N ILE 37 -2.239 51.595 20.054 1.00 6.16 N ATOM 1435 CA ILE 37 -2.744 52.350 21.224 1.00 6.28 C ATOM 1436 CB ILE 37 -4.090 53.124 20.921 1.00 6.48 C ATOM 1437 CG2 ILE 37 -3.770 54.419 20.165 1.00 7.32 C ATOM 1438 CG1 ILE 37 -5.114 52.243 20.168 1.00 6.37 C ATOM 1439 CD1 ILE 37 -6.588 52.528 20.499 1.00 6.51 C ATOM 1440 C ILE 37 -2.869 51.503 22.516 1.00 5.97 C ATOM 1441 O ILE 37 -2.484 51.963 23.600 1.00 6.19 O ATOM 1442 N SER 38 -3.370 50.266 22.366 1.00 5.63 N ATOM 1444 CA SER 38 -3.564 49.298 23.465 1.00 5.53 C ATOM 1445 CB SER 38 -4.434 48.121 23.000 1.00 5.56 C ATOM 1446 OG SER 38 -3.843 47.422 21.915 1.00 5.95 O ATOM 1448 C SER 38 -2.236 48.782 24.053 1.00 5.76 C ATOM 1449 O SER 38 -2.110 48.647 25.275 1.00 5.93 O ATOM 1450 N SER 39 -1.275 48.481 23.168 1.00 5.92 N ATOM 1452 CA SER 39 0.070 47.989 23.525 1.00 6.43 C ATOM 1453 CB SER 39 0.769 47.408 22.287 1.00 6.62 C ATOM 1454 OG SER 39 0.924 48.381 21.267 1.00 6.99 O ATOM 1456 C SER 39 0.961 49.051 24.205 1.00 6.86 C ATOM 1457 O SER 39 1.670 48.740 25.168 1.00 7.30 O ATOM 1458 N PHE 40 0.908 50.289 23.687 1.00 6.91 N ATOM 1460 CA PHE 40 1.676 51.452 24.183 1.00 7.55 C ATOM 1461 CB PHE 40 1.634 52.602 23.138 1.00 7.94 C ATOM 1462 CG PHE 40 2.856 53.530 23.146 1.00 7.72 C ATOM 1463 CD1 PHE 40 3.976 53.259 22.324 1.00 7.60 C ATOM 1464 CD2 PHE 40 2.873 54.698 23.945 1.00 7.92 C ATOM 1465 CE1 PHE 40 5.097 54.135 22.296 1.00 7.61 C ATOM 1466 CE2 PHE 40 3.986 55.584 23.928 1.00 7.94 C ATOM 1467 CZ PHE 40 5.101 55.300 23.100 1.00 7.74 C ATOM 1468 C PHE 40 1.221 51.973 25.567 1.00 7.57 C ATOM 1469 O PHE 40 2.061 52.390 26.372 1.00 8.18 O ATOM 1470 N ILE 41 -0.097 51.947 25.817 1.00 7.01 N ATOM 1472 CA ILE 41 -0.719 52.413 27.079 1.00 7.05 C ATOM 1473 CB ILE 41 -2.284 52.662 26.886 1.00 6.68 C ATOM 1474 CG2 ILE 41 -3.051 51.327 26.671 1.00 7.33 C ATOM 1475 CG1 ILE 41 -2.862 53.521 28.032 1.00 6.15 C ATOM 1476 CD1 ILE 41 -3.971 54.499 27.621 1.00 6.20 C ATOM 1477 C ILE 41 -0.382 51.527 28.311 1.00 7.03 C ATOM 1478 O ILE 41 -0.203 52.046 29.419 1.00 7.47 O ATOM 1479 N GLY 42 -0.291 50.211 28.088 1.00 6.66 N ATOM 1481 CA GLY 42 0.012 49.249 29.147 1.00 6.83 C ATOM 1482 C GLY 42 1.481 49.129 29.534 1.00 6.34 C ATOM 1483 O GLY 42 2.096 48.078 29.321 1.00 6.16 O ATOM 1484 N ARG 43 2.024 50.215 30.101 1.00 6.47 N ATOM 1486 CA ARG 43 3.424 50.309 30.553 1.00 6.35 C ATOM 1487 CB ARG 43 4.113 51.534 29.925 1.00 7.05 C ATOM 1488 CG ARG 43 4.380 51.418 28.423 1.00 7.86 C ATOM 1489 CD ARG 43 5.067 52.660 27.859 1.00 8.70 C ATOM 1490 NE ARG 43 4.192 53.837 27.842 1.00 9.28 N ATOM 1492 CZ ARG 43 4.545 55.049 27.412 1.00 10.14 C ATOM 1493 NH1 ARG 43 5.768 55.289 26.949 1.00 10.55 N ATOM 1496 NH2 ARG 43 3.661 56.038 27.447 1.00 10.75 N ATOM 1499 C ARG 43 3.502 50.387 32.090 1.00 5.95 C ATOM 1500 O ARG 43 4.595 50.299 32.669 1.00 6.26 O ATOM 1501 N SER 44 2.325 50.512 32.733 1.00 5.50 N ATOM 1503 CA SER 44 2.116 50.613 34.204 1.00 5.11 C ATOM 1504 CB SER 44 2.543 49.327 34.942 1.00 4.95 C ATOM 1505 OG SER 44 1.814 48.205 34.475 1.00 4.79 O ATOM 1507 C SER 44 2.719 51.855 34.894 1.00 4.85 C ATOM 1508 O SER 44 3.730 52.396 34.431 1.00 5.00 O ATOM 1509 N LYS 45 2.084 52.280 35.997 1.00 4.56 N ATOM 1511 CA LYS 45 2.483 53.454 36.799 1.00 4.28 C ATOM 1512 CB LYS 45 1.255 54.343 37.071 1.00 3.99 C ATOM 1513 CG LYS 45 0.702 55.064 35.845 1.00 4.11 C ATOM 1514 CD LYS 45 -0.509 55.918 36.204 1.00 4.18 C ATOM 1515 CE LYS 45 -1.079 56.650 34.990 1.00 4.61 C ATOM 1516 NZ LYS 45 -0.182 57.721 34.462 1.00 5.24 N ATOM 1520 C LYS 45 3.160 53.037 38.122 1.00 4.45 C ATOM 1521 O LYS 45 3.417 51.844 38.327 1.00 4.86 O TER END