####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS196_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.49 4.49 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.93 6.32 LCS_AVERAGE: 29.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.47 5.85 LCS_AVERAGE: 17.30 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 6 10 18 22 25 31 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 3 4 7 9 18 25 29 34 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 3 4 5 15 22 27 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 4 9 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 8 12 18 23 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 6 8 13 17 25 30 37 39 40 42 42 42 42 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 5 8 14 22 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 9 13 13 15 17 22 29 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT S 10 S 10 9 14 44 4 9 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT S 11 S 11 9 14 44 6 9 9 11 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT Y 12 Y 12 9 14 44 6 9 9 10 18 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT V 13 V 13 9 14 44 6 9 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT A 14 A 14 9 14 44 6 9 9 10 15 23 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT E 15 E 15 9 14 44 6 9 9 10 14 18 28 32 34 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT T 16 T 16 9 14 44 6 9 9 12 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT G 17 G 17 9 15 44 4 9 9 13 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT Q 18 Q 18 3 15 44 3 3 3 9 14 18 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT N 19 N 19 3 15 44 3 4 5 8 12 23 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT W 20 W 20 12 16 44 10 13 13 15 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT A 21 A 21 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT S 22 S 22 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT L 23 L 23 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT A 24 A 24 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT A 25 A 25 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT N 26 N 26 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT E 27 E 27 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT L 28 L 28 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT R 29 R 29 12 16 44 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT V 30 V 30 12 16 44 5 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT T 31 T 31 12 16 44 9 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT E 32 E 32 3 16 44 2 3 3 6 6 14 20 30 32 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT R 33 R 33 3 16 44 2 3 3 15 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT P 34 P 34 3 16 44 2 3 3 4 6 14 19 24 29 32 36 40 42 42 42 42 43 43 43 43 LCS_GDT F 35 F 35 3 16 44 3 3 12 15 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 12 17 23 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 7 11 16 22 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 14 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT S 39 S 39 7 10 44 4 5 9 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT F 40 F 40 7 10 44 3 5 7 9 10 20 26 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT I 41 I 41 7 10 44 3 5 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 LCS_GDT G 42 G 42 7 10 44 3 5 7 9 10 11 22 28 33 37 39 40 42 42 42 42 43 43 43 43 LCS_GDT R 43 R 43 7 10 44 3 5 7 9 10 11 14 17 23 26 34 40 42 42 42 42 43 43 43 43 LCS_GDT S 44 S 44 7 10 44 0 4 7 9 10 11 13 15 17 20 25 29 33 37 38 42 43 43 43 43 LCS_GDT K 45 K 45 7 10 44 0 4 7 9 10 11 11 14 15 18 20 21 27 30 33 36 38 39 40 43 LCS_AVERAGE LCS_A: 48.81 ( 17.30 29.13 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 13 16 20 24 30 32 35 38 39 40 42 42 42 42 43 43 43 43 GDT PERCENT_AT 22.73 29.55 29.55 36.36 45.45 54.55 68.18 72.73 79.55 86.36 88.64 90.91 95.45 95.45 95.45 95.45 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.33 0.47 0.47 1.26 1.61 2.01 2.48 2.61 2.85 3.09 3.19 3.32 3.64 3.64 3.64 3.64 3.97 3.97 3.97 3.97 GDT RMS_ALL_AT 5.88 5.94 5.94 4.79 4.84 4.87 4.99 5.02 4.78 4.78 4.77 4.69 4.60 4.60 4.60 4.60 4.52 4.52 4.52 4.52 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.773 0 0.448 0.457 6.792 0.000 0.000 - LGA V 3 V 3 5.426 0 0.216 1.059 6.508 0.909 0.519 6.508 LGA Q 4 Q 4 4.509 0 0.158 0.249 7.732 10.000 4.444 6.290 LGA G 5 G 5 2.552 0 0.218 0.218 5.465 15.000 15.000 - LGA P 6 P 6 5.233 0 0.044 0.128 6.935 0.455 0.260 6.935 LGA W 7 W 7 6.622 0 0.205 1.283 12.870 1.818 0.519 12.788 LGA V 8 V 8 3.482 0 0.389 1.034 6.357 28.182 18.442 3.517 LGA G 9 G 9 3.970 0 0.558 0.558 3.970 23.182 23.182 - LGA S 10 S 10 1.621 0 0.115 0.108 2.331 55.455 54.242 1.202 LGA S 11 S 11 3.052 0 0.035 0.698 6.310 28.636 19.394 6.310 LGA Y 12 Y 12 3.211 0 0.091 0.807 10.262 31.364 10.909 10.262 LGA V 13 V 13 1.287 0 0.110 1.074 5.812 58.636 42.857 5.812 LGA A 14 A 14 3.652 0 0.038 0.054 4.962 14.091 11.636 - LGA E 15 E 15 4.773 0 0.098 1.141 7.736 7.273 3.232 7.723 LGA T 16 T 16 2.526 0 0.102 0.249 3.216 32.727 34.026 1.604 LGA G 17 G 17 2.261 0 0.652 0.652 2.875 38.636 38.636 - LGA Q 18 Q 18 3.786 0 0.591 0.426 8.400 11.818 5.253 8.161 LGA N 19 N 19 3.081 0 0.446 1.355 9.331 29.545 15.000 7.117 LGA W 20 W 20 2.929 0 0.503 1.149 10.190 46.364 13.247 10.190 LGA A 21 A 21 1.276 0 0.039 0.048 1.685 65.909 65.818 - LGA S 22 S 22 1.179 0 0.019 0.624 1.548 65.455 60.606 1.519 LGA L 23 L 23 1.717 0 0.043 1.403 6.426 58.182 34.773 4.339 LGA A 24 A 24 1.820 0 0.033 0.040 2.024 54.545 51.273 - LGA A 25 A 25 0.871 0 0.067 0.064 1.597 65.909 72.727 - LGA N 26 N 26 0.816 0 0.032 0.502 1.717 73.636 73.864 0.908 LGA E 27 E 27 1.465 0 0.044 1.396 6.814 58.182 33.535 6.814 LGA L 28 L 28 1.975 0 0.073 1.409 5.759 47.727 29.091 5.759 LGA R 29 R 29 1.895 0 0.049 1.910 11.851 50.909 21.157 11.851 LGA V 30 V 30 1.741 0 0.263 1.083 2.400 54.545 47.532 2.400 LGA T 31 T 31 1.876 0 0.704 0.841 6.022 39.545 25.714 3.868 LGA E 32 E 32 5.701 0 0.510 1.123 10.118 3.182 1.414 9.208 LGA R 33 R 33 3.322 0 0.124 0.984 7.338 5.909 9.752 6.305 LGA P 34 P 34 6.252 0 0.660 0.613 7.851 0.000 0.000 7.851 LGA F 35 F 35 2.750 0 0.646 1.159 9.986 28.636 11.405 9.986 LGA W 36 W 36 3.638 0 0.623 0.592 8.571 26.818 7.662 8.451 LGA I 37 I 37 3.892 0 0.065 0.810 7.504 26.364 13.182 7.504 LGA S 38 S 38 2.475 0 0.108 0.566 5.863 33.636 23.333 5.863 LGA S 39 S 39 2.374 0 0.149 0.716 4.785 35.000 28.788 4.067 LGA F 40 F 40 3.729 0 0.052 0.348 11.632 21.818 7.934 11.296 LGA I 41 I 41 1.493 0 0.137 0.512 6.034 38.182 23.409 6.034 LGA G 42 G 42 7.732 0 0.066 0.066 10.963 0.000 0.000 - LGA R 43 R 43 10.011 0 0.214 1.370 13.646 0.000 0.000 13.646 LGA S 44 S 44 13.265 0 0.409 0.847 16.620 0.000 0.000 14.594 LGA K 45 K 45 17.466 0 0.707 0.673 20.240 0.000 0.000 20.240 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.486 4.489 6.166 29.277 21.677 9.143 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 32 2.61 58.523 54.522 1.183 LGA_LOCAL RMSD: 2.606 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.016 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.486 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.461213 * X + 0.800293 * Y + 0.383163 * Z + -6.594128 Y_new = 0.470819 * X + -0.586763 * Y + 0.658816 * Z + 51.274342 Z_new = 0.752071 * X + -0.123455 * Y + -0.647416 * Z + 26.730627 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.795704 -0.851199 -2.953166 [DEG: 45.5905 -48.7701 -169.2040 ] ZXZ: 2.614818 2.274985 1.733498 [DEG: 149.8180 130.3471 99.3221 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS196_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS196_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 32 2.61 54.522 4.49 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS196_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 10.860 39.950 11.060 1.00 4.40 N ATOM 19 CA ALA 2 10.741 40.837 9.897 1.00 4.40 C ATOM 21 CB ALA 2 10.872 42.306 10.332 1.00 4.40 C ATOM 25 C ALA 2 11.378 40.417 8.560 1.00 4.40 C ATOM 26 O ALA 2 12.270 41.102 8.082 1.00 4.40 O ATOM 27 N VAL 3 11.007 39.244 8.017 1.00 5.43 N ATOM 29 CA VAL 3 11.716 38.556 6.898 1.00 5.43 C ATOM 31 CB VAL 3 11.831 37.048 7.140 1.00 5.43 C ATOM 33 CG1 VAL 3 12.590 36.721 8.427 1.00 5.43 C ATOM 37 CG2 VAL 3 10.490 36.316 7.107 1.00 5.43 C ATOM 41 C VAL 3 11.139 38.952 5.532 1.00 5.43 C ATOM 42 O VAL 3 10.387 39.911 5.457 1.00 5.43 O ATOM 43 N GLN 4 11.389 38.213 4.450 1.00 5.14 N ATOM 45 CA GLN 4 11.027 38.624 3.076 1.00 5.14 C ATOM 47 CB GLN 4 12.146 38.274 2.089 1.00 5.14 C ATOM 50 CG GLN 4 13.508 38.890 2.458 1.00 5.14 C ATOM 53 CD GLN 4 14.660 38.226 1.722 1.00 5.14 C ATOM 54 OE1 GLN 4 14.666 37.018 1.525 1.00 5.14 O ATOM 55 NE2 GLN 4 15.686 38.957 1.368 1.00 5.14 N ATOM 58 C GLN 4 9.712 37.976 2.615 1.00 5.14 C ATOM 59 O GLN 4 9.641 36.751 2.472 1.00 5.14 O ATOM 60 N GLY 5 8.652 38.807 2.503 1.00 4.21 N ATOM 62 CA GLY 5 7.335 38.455 1.946 1.00 4.21 C ATOM 65 C GLY 5 6.172 39.229 2.600 1.00 4.21 C ATOM 66 O GLY 5 5.962 39.053 3.796 1.00 4.21 O ATOM 67 N PRO 6 5.373 40.037 1.869 1.00 3.29 N ATOM 68 CD PRO 6 5.538 40.370 0.463 1.00 3.29 C ATOM 71 CG PRO 6 4.296 41.172 0.080 1.00 3.29 C ATOM 74 CB PRO 6 3.914 41.869 1.387 1.00 3.29 C ATOM 77 CA PRO 6 4.298 40.849 2.464 1.00 3.29 C ATOM 79 C PRO 6 3.071 40.080 2.975 1.00 3.29 C ATOM 80 O PRO 6 2.327 40.618 3.787 1.00 3.29 O ATOM 81 N TRP 7 2.789 38.878 2.476 1.00 4.43 N ATOM 83 CA TRP 7 1.846 37.964 3.132 1.00 4.43 C ATOM 85 CB TRP 7 1.177 37.056 2.083 1.00 4.43 C ATOM 88 CG TRP 7 0.395 35.894 2.625 1.00 4.43 C ATOM 89 CD1 TRP 7 0.909 34.673 2.908 1.00 4.43 C ATOM 91 NE1 TRP 7 -0.098 33.810 3.295 1.00 4.43 N ATOM 93 CE2 TRP 7 -1.324 34.441 3.298 1.00 4.43 C ATOM 94 CZ2 TRP 7 -2.610 34.029 3.682 1.00 4.43 C ATOM 96 CH2 TRP 7 -3.677 34.936 3.574 1.00 4.43 C ATOM 98 CZ3 TRP 7 -3.449 36.228 3.067 1.00 4.43 C ATOM 100 CE3 TRP 7 -2.150 36.638 2.704 1.00 4.43 C ATOM 102 CD2 TRP 7 -1.047 35.766 2.842 1.00 4.43 C ATOM 103 C TRP 7 2.618 37.160 4.179 1.00 4.43 C ATOM 104 O TRP 7 3.282 36.184 3.832 1.00 4.43 O ATOM 105 N VAL 8 2.582 37.639 5.435 1.00 2.62 N ATOM 107 CA VAL 8 2.550 36.846 6.685 1.00 2.62 C ATOM 109 CB VAL 8 1.089 36.802 7.209 1.00 2.62 C ATOM 111 CG1 VAL 8 0.060 36.352 6.162 1.00 2.62 C ATOM 115 CG2 VAL 8 0.828 36.009 8.492 1.00 2.62 C ATOM 119 C VAL 8 3.260 35.490 6.638 1.00 2.62 C ATOM 120 O VAL 8 2.735 34.456 7.038 1.00 2.62 O ATOM 121 N GLY 9 4.452 35.519 6.032 1.00 2.85 N ATOM 123 CA GLY 9 5.670 34.823 6.445 1.00 2.85 C ATOM 126 C GLY 9 5.573 33.331 6.340 1.00 2.85 C ATOM 127 O GLY 9 5.428 32.716 7.375 1.00 2.85 O ATOM 128 N SER 10 5.742 32.778 5.141 1.00 2.54 N ATOM 130 CA SER 10 5.170 31.475 4.772 1.00 2.54 C ATOM 132 CB SER 10 5.418 31.217 3.281 1.00 2.54 C ATOM 135 OG SER 10 6.805 31.288 2.985 1.00 2.54 O ATOM 137 C SER 10 5.707 30.297 5.595 1.00 2.54 C ATOM 138 O SER 10 4.930 29.489 6.098 1.00 2.54 O ATOM 139 N SER 11 7.025 30.265 5.826 1.00 2.29 N ATOM 141 CA SER 11 7.624 29.271 6.714 1.00 2.29 C ATOM 143 CB SER 11 9.059 28.940 6.371 1.00 2.29 C ATOM 146 OG SER 11 9.304 28.657 4.996 1.00 2.29 O ATOM 148 C SER 11 7.407 29.553 8.214 1.00 2.29 C ATOM 149 O SER 11 7.021 28.630 8.909 1.00 2.29 O ATOM 150 N TYR 12 7.526 30.796 8.706 1.00 1.71 N ATOM 152 CA TYR 12 7.057 31.230 10.035 1.00 1.71 C ATOM 154 CB TYR 12 7.080 32.758 10.074 1.00 1.71 C ATOM 157 CG TYR 12 6.451 33.378 11.294 1.00 1.71 C ATOM 158 CD1 TYR 12 6.711 32.842 12.567 1.00 1.71 C ATOM 160 CE1 TYR 12 6.097 33.392 13.697 1.00 1.71 C ATOM 162 CZ TYR 12 5.210 34.466 13.545 1.00 1.71 C ATOM 163 OH TYR 12 4.520 34.942 14.593 1.00 1.71 O ATOM 165 CE2 TYR 12 4.980 35.029 12.279 1.00 1.71 C ATOM 167 CD2 TYR 12 5.580 34.470 11.145 1.00 1.71 C ATOM 169 C TYR 12 5.675 30.655 10.438 1.00 1.71 C ATOM 170 O TYR 12 5.500 30.111 11.535 1.00 1.71 O ATOM 171 N VAL 13 4.660 30.818 9.592 1.00 1.51 N ATOM 173 CA VAL 13 3.322 30.301 9.882 1.00 1.51 C ATOM 175 CB VAL 13 2.238 30.929 9.008 1.00 1.51 C ATOM 177 CG1 VAL 13 1.999 32.379 9.411 1.00 1.51 C ATOM 181 CG2 VAL 13 2.481 30.875 7.502 1.00 1.51 C ATOM 185 C VAL 13 3.213 28.781 9.791 1.00 1.51 C ATOM 186 O VAL 13 2.378 28.217 10.486 1.00 1.51 O ATOM 187 N ALA 14 4.008 28.089 8.969 1.00 1.93 N ATOM 189 CA ALA 14 4.059 26.630 9.032 1.00 1.93 C ATOM 191 CB ALA 14 4.872 26.089 7.848 1.00 1.93 C ATOM 195 C ALA 14 4.578 26.135 10.397 1.00 1.93 C ATOM 196 O ALA 14 3.962 25.262 11.018 1.00 1.93 O ATOM 197 N GLU 15 5.663 26.743 10.857 1.00 2.13 N ATOM 199 CA GLU 15 6.504 26.408 12.014 1.00 2.13 C ATOM 201 CB GLU 15 7.816 27.188 11.905 1.00 2.13 C ATOM 204 CG GLU 15 8.688 26.673 10.781 1.00 2.13 C ATOM 207 CD GLU 15 9.853 27.616 10.525 1.00 2.13 C ATOM 208 OE1 GLU 15 10.681 27.746 11.452 1.00 2.13 O ATOM 209 OE2 GLU 15 9.994 28.153 9.399 1.00 2.13 O ATOM 210 C GLU 15 5.866 26.817 13.343 1.00 2.13 C ATOM 211 O GLU 15 6.253 26.308 14.392 1.00 2.13 O ATOM 212 N THR 16 4.827 27.659 13.260 1.00 2.03 N ATOM 214 CA THR 16 3.897 27.912 14.368 1.00 2.03 C ATOM 216 CB THR 16 3.544 29.402 14.517 1.00 2.03 C ATOM 218 CG2 THR 16 4.711 30.207 15.080 1.00 2.03 C ATOM 222 OG1 THR 16 3.204 29.997 13.289 1.00 2.03 O ATOM 224 C THR 16 2.613 27.078 14.280 1.00 2.03 C ATOM 225 O THR 16 2.093 26.662 15.317 1.00 2.03 O ATOM 226 N GLY 17 2.035 26.885 13.087 1.00 2.28 N ATOM 228 CA GLY 17 0.979 25.902 12.837 1.00 2.28 C ATOM 231 C GLY 17 -0.162 26.366 11.922 1.00 2.28 C ATOM 232 O GLY 17 -0.351 27.541 11.629 1.00 2.28 O ATOM 233 N GLN 18 -1.009 25.411 11.522 1.00 2.62 N ATOM 235 CA GLN 18 -1.707 25.411 10.222 1.00 2.62 C ATOM 237 CB GLN 18 -1.817 23.973 9.668 1.00 2.62 C ATOM 240 CG GLN 18 -0.588 23.065 9.914 1.00 2.62 C ATOM 243 CD GLN 18 0.755 23.676 9.499 1.00 2.62 C ATOM 244 OE1 GLN 18 0.895 24.295 8.459 1.00 2.62 O ATOM 245 NE2 GLN 18 1.793 23.448 10.277 1.00 2.62 N ATOM 248 C GLN 18 -3.046 26.194 10.159 1.00 2.62 C ATOM 249 O GLN 18 -3.831 25.991 9.238 1.00 2.62 O ATOM 250 N ASN 19 -3.318 27.108 11.099 1.00 2.70 N ATOM 252 CA ASN 19 -4.469 28.032 11.062 1.00 2.70 C ATOM 254 CB ASN 19 -5.266 27.901 12.377 1.00 2.70 C ATOM 257 CG ASN 19 -6.597 28.643 12.353 1.00 2.70 C ATOM 258 OD1 ASN 19 -7.112 29.036 11.323 1.00 2.70 O ATOM 259 ND2 ASN 19 -7.221 28.839 13.494 1.00 2.70 N ATOM 262 C ASN 19 -3.957 29.464 10.767 1.00 2.70 C ATOM 263 O ASN 19 -4.150 30.417 11.531 1.00 2.70 O ATOM 264 N TRP 20 -3.199 29.536 9.667 1.00 1.98 N ATOM 266 CA TRP 20 -2.014 30.370 9.453 1.00 1.98 C ATOM 268 CB TRP 20 -1.707 30.367 7.938 1.00 1.98 C ATOM 271 CG TRP 20 -0.995 29.164 7.377 1.00 1.98 C ATOM 272 CD1 TRP 20 -0.349 28.204 8.086 1.00 1.98 C ATOM 274 NE1 TRP 20 0.198 27.271 7.228 1.00 1.98 N ATOM 276 CE2 TRP 20 -0.044 27.588 5.911 1.00 1.98 C ATOM 277 CZ2 TRP 20 0.311 26.975 4.699 1.00 1.98 C ATOM 279 CH2 TRP 20 -0.047 27.598 3.490 1.00 1.98 C ATOM 281 CZ3 TRP 20 -0.731 28.828 3.513 1.00 1.98 C ATOM 283 CE3 TRP 20 -1.089 29.427 4.737 1.00 1.98 C ATOM 285 CD2 TRP 20 -0.777 28.812 5.970 1.00 1.98 C ATOM 286 C TRP 20 -2.026 31.773 10.071 1.00 1.98 C ATOM 287 O TRP 20 -1.436 32.001 11.126 1.00 1.98 O ATOM 288 N ALA 21 -2.784 32.683 9.470 1.00 1.37 N ATOM 290 CA ALA 21 -2.584 34.110 9.684 1.00 1.37 C ATOM 292 CB ALA 21 -3.014 34.808 8.392 1.00 1.37 C ATOM 296 C ALA 21 -3.292 34.648 10.945 1.00 1.37 C ATOM 297 O ALA 21 -2.833 35.616 11.558 1.00 1.37 O ATOM 298 N SER 22 -4.451 34.070 11.290 1.00 1.67 N ATOM 300 CA SER 22 -5.213 34.350 12.512 1.00 1.67 C ATOM 302 CB SER 22 -6.592 33.679 12.429 1.00 1.67 C ATOM 305 OG SER 22 -7.349 34.224 11.365 1.00 1.67 O ATOM 307 C SER 22 -4.503 33.829 13.764 1.00 1.67 C ATOM 308 O SER 22 -4.458 34.524 14.781 1.00 1.67 O ATOM 309 N LEU 23 -3.899 32.628 13.673 1.00 1.90 N ATOM 311 CA LEU 23 -3.067 32.092 14.753 1.00 1.90 C ATOM 313 CB LEU 23 -2.595 30.676 14.372 1.00 1.90 C ATOM 316 CG LEU 23 -1.954 29.883 15.527 1.00 1.90 C ATOM 318 CD1 LEU 23 -2.968 29.541 16.626 1.00 1.90 C ATOM 322 CD2 LEU 23 -1.405 28.567 14.979 1.00 1.90 C ATOM 326 C LEU 23 -1.880 33.001 15.088 1.00 1.90 C ATOM 327 O LEU 23 -1.599 33.201 16.268 1.00 1.90 O ATOM 328 N ALA 24 -1.147 33.459 14.059 1.00 1.25 N ATOM 330 CA ALA 24 0.010 34.330 14.235 1.00 1.25 C ATOM 332 CB ALA 24 0.792 34.352 12.924 1.00 1.25 C ATOM 336 C ALA 24 -0.410 35.741 14.700 1.00 1.25 C ATOM 337 O ALA 24 0.310 36.377 15.460 1.00 1.25 O ATOM 338 N ALA 25 -1.609 36.213 14.354 1.00 1.07 N ATOM 340 CA ALA 25 -2.092 37.523 14.806 1.00 1.07 C ATOM 342 CB ALA 25 -3.310 37.910 13.952 1.00 1.07 C ATOM 346 C ALA 25 -2.406 37.574 16.309 1.00 1.07 C ATOM 347 O ALA 25 -2.183 38.596 16.979 1.00 1.07 O ATOM 348 N ASN 26 -2.997 36.480 16.809 1.00 1.72 N ATOM 350 CA ASN 26 -3.298 36.370 18.226 1.00 1.72 C ATOM 352 CB ASN 26 -4.454 35.369 18.418 1.00 1.72 C ATOM 355 CG ASN 26 -5.812 36.045 18.250 1.00 1.72 C ATOM 356 OD1 ASN 26 -6.103 36.697 17.263 1.00 1.72 O ATOM 357 ND2 ASN 26 -6.722 35.828 19.172 1.00 1.72 N ATOM 360 C ASN 26 -2.050 36.064 19.072 1.00 1.72 C ATOM 361 O ASN 26 -1.978 36.561 20.197 1.00 1.72 O ATOM 362 N GLU 27 -1.030 35.357 18.505 1.00 2.09 N ATOM 364 CA GLU 27 0.311 35.139 19.083 1.00 2.09 C ATOM 366 CB GLU 27 1.076 34.094 18.242 1.00 2.09 C ATOM 369 CG GLU 27 2.441 33.648 18.816 1.00 2.09 C ATOM 372 CD GLU 27 3.681 34.289 18.156 1.00 2.09 C ATOM 373 OE1 GLU 27 4.738 34.387 18.820 1.00 2.09 O ATOM 374 OE2 GLU 27 3.625 34.618 16.951 1.00 2.09 O ATOM 375 C GLU 27 1.125 36.430 19.205 1.00 2.09 C ATOM 376 O GLU 27 1.889 36.562 20.160 1.00 2.09 O ATOM 377 N LEU 28 1.028 37.335 18.224 1.00 2.04 N ATOM 379 CA LEU 28 1.666 38.653 18.300 1.00 2.04 C ATOM 381 CB LEU 28 2.078 39.162 16.906 1.00 2.04 C ATOM 384 CG LEU 28 2.968 40.424 16.865 1.00 2.04 C ATOM 386 CD1 LEU 28 4.218 40.344 17.745 1.00 2.04 C ATOM 390 CD2 LEU 28 3.432 40.681 15.429 1.00 2.04 C ATOM 394 C LEU 28 0.791 39.692 19.032 1.00 2.04 C ATOM 395 O LEU 28 1.233 40.813 19.297 1.00 2.04 O ATOM 396 N ARG 29 -0.439 39.302 19.440 1.00 2.44 N ATOM 398 CA ARG 29 -1.442 40.188 20.024 1.00 2.44 C ATOM 400 CB ARG 29 -1.264 40.226 21.557 1.00 2.44 C ATOM 403 CG ARG 29 -2.317 41.004 22.374 1.00 2.44 C ATOM 406 CD ARG 29 -3.740 41.038 21.792 1.00 2.44 C ATOM 409 NE ARG 29 -4.291 39.692 21.558 1.00 2.44 N ATOM 411 CZ ARG 29 -5.413 39.424 20.920 1.00 2.44 C ATOM 412 NH1 ARG 29 -5.643 38.217 20.516 1.00 2.44 N ATOM 415 NH2 ARG 29 -6.331 40.312 20.689 1.00 2.44 N ATOM 418 C ARG 29 -1.517 41.537 19.302 1.00 2.44 C ATOM 419 O ARG 29 -1.649 42.593 19.925 1.00 2.44 O ATOM 420 N VAL 30 -1.549 41.484 17.959 1.00 1.83 N ATOM 422 CA VAL 30 -2.379 42.482 17.272 1.00 1.83 C ATOM 424 CB VAL 30 -2.003 42.714 15.798 1.00 1.83 C ATOM 426 CG1 VAL 30 -0.668 43.458 15.676 1.00 1.83 C ATOM 430 CG2 VAL 30 -1.946 41.435 14.972 1.00 1.83 C ATOM 434 C VAL 30 -3.857 42.094 17.497 1.00 1.83 C ATOM 435 O VAL 30 -4.168 41.115 18.179 1.00 1.83 O ATOM 436 N THR 31 -4.811 42.889 17.005 1.00 2.21 N ATOM 438 CA THR 31 -6.229 42.487 17.080 1.00 2.21 C ATOM 440 CB THR 31 -7.151 43.570 16.488 1.00 2.21 C ATOM 442 CG2 THR 31 -8.579 43.518 17.034 1.00 2.21 C ATOM 446 OG1 THR 31 -6.688 44.882 16.727 1.00 2.21 O ATOM 448 C THR 31 -6.471 41.172 16.323 1.00 2.21 C ATOM 449 O THR 31 -5.614 40.757 15.547 1.00 2.21 O ATOM 450 N GLU 32 -7.677 40.613 16.483 1.00 3.69 N ATOM 452 CA GLU 32 -8.360 39.517 15.753 1.00 3.69 C ATOM 454 CB GLU 32 -9.734 39.280 16.436 1.00 3.69 C ATOM 457 CG GLU 32 -9.733 38.564 17.794 1.00 3.69 C ATOM 460 CD GLU 32 -9.084 39.331 18.951 1.00 3.69 C ATOM 461 OE1 GLU 32 -8.659 38.668 19.923 1.00 3.69 O ATOM 462 OE2 GLU 32 -9.032 40.584 18.935 1.00 3.69 O ATOM 463 C GLU 32 -8.542 39.733 14.220 1.00 3.69 C ATOM 464 O GLU 32 -9.558 39.372 13.620 1.00 3.69 O ATOM 465 N ARG 33 -7.522 40.228 13.506 1.00 2.58 N ATOM 467 CA ARG 33 -7.543 40.780 12.155 1.00 2.58 C ATOM 469 CB ARG 33 -7.837 42.295 12.196 1.00 2.58 C ATOM 472 CG ARG 33 -8.953 42.737 13.171 1.00 2.58 C ATOM 475 CD ARG 33 -10.388 42.533 12.666 1.00 2.58 C ATOM 478 NE ARG 33 -11.379 42.879 13.712 1.00 2.58 N ATOM 480 CZ ARG 33 -12.167 42.057 14.393 1.00 2.58 C ATOM 481 NH1 ARG 33 -13.055 42.548 15.210 1.00 2.58 N ATOM 484 NH2 ARG 33 -12.096 40.758 14.331 1.00 2.58 N ATOM 487 C ARG 33 -6.184 40.451 11.494 1.00 2.58 C ATOM 488 O ARG 33 -5.150 41.084 11.769 1.00 2.58 O ATOM 489 N PRO 34 -6.154 39.507 10.538 1.00 2.25 N ATOM 490 CD PRO 34 -7.286 38.749 10.012 1.00 2.25 C ATOM 493 CG PRO 34 -6.756 38.005 8.791 1.00 2.25 C ATOM 496 CB PRO 34 -5.292 37.784 9.147 1.00 2.25 C ATOM 499 CA PRO 34 -4.900 39.005 9.980 1.00 2.25 C ATOM 501 C PRO 34 -4.146 40.071 9.168 1.00 2.25 C ATOM 502 O PRO 34 -2.952 39.918 8.935 1.00 2.25 O ATOM 503 N PHE 35 -4.843 41.057 8.609 1.00 1.90 N ATOM 505 CA PHE 35 -4.251 42.218 7.933 1.00 1.90 C ATOM 507 CB PHE 35 -5.377 43.198 7.563 1.00 1.90 C ATOM 510 CG PHE 35 -5.017 44.165 6.449 1.00 1.90 C ATOM 511 CD1 PHE 35 -5.357 43.855 5.116 1.00 1.90 C ATOM 513 CE1 PHE 35 -5.196 44.818 4.104 1.00 1.90 C ATOM 515 CZ PHE 35 -4.639 46.073 4.408 1.00 1.90 C ATOM 517 CE2 PHE 35 -4.272 46.374 5.731 1.00 1.90 C ATOM 519 CD2 PHE 35 -4.434 45.412 6.744 1.00 1.90 C ATOM 521 C PHE 35 -3.142 42.925 8.754 1.00 1.90 C ATOM 522 O PHE 35 -2.183 43.456 8.193 1.00 1.90 O ATOM 523 N TRP 36 -3.271 42.950 10.089 1.00 1.89 N ATOM 525 CA TRP 36 -2.295 43.602 10.971 1.00 1.89 C ATOM 527 CB TRP 36 -2.854 43.723 12.395 1.00 1.89 C ATOM 530 CG TRP 36 -4.174 44.409 12.604 1.00 1.89 C ATOM 531 CD1 TRP 36 -4.979 44.157 13.660 1.00 1.89 C ATOM 533 NE1 TRP 36 -5.997 45.084 13.717 1.00 1.89 N ATOM 535 CE2 TRP 36 -5.973 45.921 12.622 1.00 1.89 C ATOM 536 CZ2 TRP 36 -6.843 46.930 12.184 1.00 1.89 C ATOM 538 CH2 TRP 36 -6.577 47.577 10.967 1.00 1.89 C ATOM 540 CZ3 TRP 36 -5.440 47.224 10.221 1.00 1.89 C ATOM 542 CE3 TRP 36 -4.574 46.207 10.668 1.00 1.89 C ATOM 544 CD2 TRP 36 -4.822 45.511 11.876 1.00 1.89 C ATOM 545 C TRP 36 -0.969 42.844 10.988 1.00 1.89 C ATOM 546 O TRP 36 0.093 43.480 10.948 1.00 1.89 O ATOM 547 N ILE 37 -0.991 41.507 10.912 1.00 1.61 N ATOM 549 CA ILE 37 0.311 40.791 10.856 1.00 1.61 C ATOM 551 CB ILE 37 0.226 39.305 11.227 1.00 1.61 C ATOM 553 CG2 ILE 37 1.578 38.618 10.959 1.00 1.61 C ATOM 557 CG1 ILE 37 -0.135 39.108 12.703 1.00 1.61 C ATOM 560 CD1 ILE 37 0.935 39.565 13.706 1.00 1.61 C ATOM 564 C ILE 37 1.014 40.980 9.498 1.00 1.61 C ATOM 565 O ILE 37 2.237 41.094 9.452 1.00 1.61 O ATOM 566 N SER 38 0.267 40.889 8.388 1.00 1.92 N ATOM 568 CA SER 38 0.730 41.204 7.024 1.00 1.92 C ATOM 570 CB SER 38 -0.449 41.123 6.043 1.00 1.92 C ATOM 573 OG SER 38 -1.131 39.889 6.139 1.00 1.92 O ATOM 575 C SER 38 1.348 42.611 6.869 1.00 1.92 C ATOM 576 O SER 38 1.799 43.004 5.787 1.00 1.92 O ATOM 577 N SER 39 1.476 43.352 7.961 1.00 2.24 N ATOM 579 CA SER 39 2.183 44.631 8.003 1.00 2.24 C ATOM 581 CB SER 39 1.391 45.652 8.831 1.00 2.24 C ATOM 584 OG SER 39 0.169 45.984 8.197 1.00 2.24 O ATOM 586 C SER 39 3.598 44.453 8.578 1.00 2.24 C ATOM 587 O SER 39 4.562 45.075 8.108 1.00 2.24 O ATOM 588 N PHE 40 3.756 43.528 9.541 1.00 1.69 N ATOM 590 CA PHE 40 4.993 43.467 10.329 1.00 1.69 C ATOM 592 CB PHE 40 4.669 43.397 11.834 1.00 1.69 C ATOM 595 CG PHE 40 4.303 44.743 12.467 1.00 1.69 C ATOM 596 CD1 PHE 40 3.238 45.524 11.970 1.00 1.69 C ATOM 598 CE1 PHE 40 2.879 46.734 12.600 1.00 1.69 C ATOM 600 CZ PHE 40 3.601 47.191 13.718 1.00 1.69 C ATOM 602 CE2 PHE 40 4.680 46.434 14.204 1.00 1.69 C ATOM 604 CD2 PHE 40 5.042 45.234 13.564 1.00 1.69 C ATOM 606 C PHE 40 5.940 42.355 9.814 1.00 1.69 C ATOM 607 O PHE 40 7.168 42.526 9.760 1.00 1.69 O ATOM 608 N ILE 41 5.361 41.294 9.273 1.00 1.79 N ATOM 610 CA ILE 41 6.132 40.488 8.332 1.00 1.79 C ATOM 612 CB ILE 41 5.636 39.037 8.200 1.00 1.79 C ATOM 614 CG2 ILE 41 6.497 38.392 7.077 1.00 1.79 C ATOM 618 CG1 ILE 41 5.590 38.241 9.534 1.00 1.79 C ATOM 621 CD1 ILE 41 6.780 37.324 9.806 1.00 1.79 C ATOM 625 C ILE 41 6.066 41.174 6.963 1.00 1.79 C ATOM 626 O ILE 41 5.166 41.955 6.666 1.00 1.79 O ATOM 627 N GLY 42 7.007 40.803 6.099 1.00 4.27 N ATOM 629 CA GLY 42 7.240 41.436 4.824 1.00 4.27 C ATOM 632 C GLY 42 8.028 42.736 4.923 1.00 4.27 C ATOM 633 O GLY 42 8.516 43.149 3.872 1.00 4.27 O ATOM 634 N ARG 43 8.236 43.356 6.105 1.00 5.40 N ATOM 636 CA ARG 43 9.316 44.359 6.260 1.00 5.40 C ATOM 638 CB ARG 43 8.847 45.624 7.025 1.00 5.40 C ATOM 641 CG ARG 43 7.522 46.350 6.655 1.00 5.40 C ATOM 644 CD ARG 43 7.006 46.329 5.202 1.00 5.40 C ATOM 647 NE ARG 43 5.535 46.530 5.110 1.00 5.40 N ATOM 649 CZ ARG 43 4.611 45.579 5.087 1.00 5.40 C ATOM 650 NH1 ARG 43 3.369 45.819 4.782 1.00 5.40 N ATOM 653 NH2 ARG 43 4.856 44.355 5.422 1.00 5.40 N ATOM 656 C ARG 43 10.587 43.751 6.864 1.00 5.40 C ATOM 657 O ARG 43 10.621 43.522 8.062 1.00 5.40 O ATOM 658 N SER 44 11.647 43.587 6.042 1.00 6.87 N ATOM 660 CA SER 44 12.832 42.695 6.147 1.00 6.87 C ATOM 662 CB SER 44 13.152 42.229 4.720 1.00 6.87 C ATOM 665 OG SER 44 13.509 43.313 3.888 1.00 6.87 O ATOM 667 C SER 44 14.096 43.341 6.799 1.00 6.87 C ATOM 668 O SER 44 15.110 43.500 6.123 1.00 6.87 O ATOM 669 N LYS 45 14.029 43.846 8.027 1.00 5.09 N ATOM 671 CA LYS 45 14.415 45.227 8.432 1.00 5.09 C ATOM 673 CB LYS 45 13.860 45.573 9.825 1.00 5.09 C ATOM 676 CG LYS 45 12.427 46.101 9.926 1.00 5.09 C ATOM 679 CD LYS 45 12.079 46.270 11.413 1.00 5.09 C ATOM 682 CE LYS 45 10.602 46.623 11.599 1.00 5.09 C ATOM 685 NZ LYS 45 10.258 46.660 13.039 1.00 5.09 N ATOM 689 C LYS 45 15.907 45.587 8.456 1.00 5.09 C ATOM 690 O LYS 45 16.268 46.759 8.454 1.00 5.09 O TER END