####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS208_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.99 15.26 LCS_AVERAGE: 40.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.83 25.31 LCS_AVERAGE: 13.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.83 15.95 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.73 27.46 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.99 24.69 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.90 17.54 LCS_AVERAGE: 9.04 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 8 3 5 6 6 6 8 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT V 3 V 3 5 6 8 3 5 6 6 7 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT Q 4 Q 4 5 6 8 3 5 6 6 6 9 11 13 14 14 17 19 21 22 25 26 27 29 31 32 LCS_GDT G 5 G 5 5 6 13 3 4 6 6 6 7 7 10 11 12 15 17 19 21 24 26 27 29 31 32 LCS_GDT P 6 P 6 5 6 16 0 5 6 6 6 7 7 7 10 11 13 16 17 21 23 26 27 29 31 32 LCS_GDT W 7 W 7 3 6 16 0 3 4 4 4 7 7 7 10 11 12 14 17 21 23 26 27 29 31 32 LCS_GDT V 8 V 8 3 4 16 3 3 4 4 5 7 7 9 10 11 13 15 17 21 23 26 27 29 31 32 LCS_GDT G 9 G 9 3 4 16 3 3 4 5 6 8 9 11 11 13 14 14 16 21 23 26 27 29 31 32 LCS_GDT S 10 S 10 4 5 16 3 4 5 5 5 7 8 11 11 13 14 14 16 18 19 21 23 28 30 30 LCS_GDT S 11 S 11 4 5 16 3 4 5 5 6 8 9 11 11 13 14 14 14 16 17 20 21 22 24 27 LCS_GDT Y 12 Y 12 4 5 16 3 4 5 5 5 5 6 9 11 13 14 14 14 15 17 18 21 21 22 24 LCS_GDT V 13 V 13 5 8 16 3 4 5 5 7 7 9 10 11 13 14 14 15 16 18 20 21 22 25 27 LCS_GDT A 14 A 14 5 8 16 3 4 6 6 7 8 9 11 11 13 14 14 14 15 17 18 21 21 22 25 LCS_GDT E 15 E 15 5 8 16 3 4 6 6 7 8 9 11 11 13 14 14 14 15 17 18 21 21 22 24 LCS_GDT T 16 T 16 5 8 16 3 4 6 6 7 8 9 11 11 13 14 14 15 16 17 20 21 22 25 26 LCS_GDT G 17 G 17 5 8 16 3 4 6 6 7 8 9 11 11 13 14 14 15 16 18 20 22 23 25 27 LCS_GDT Q 18 Q 18 5 8 16 3 4 6 6 7 8 9 11 11 13 14 14 16 18 19 21 24 26 30 30 LCS_GDT N 19 N 19 4 8 16 4 4 4 6 6 8 9 11 11 13 14 15 17 21 23 26 27 29 31 32 LCS_GDT W 20 W 20 4 8 18 4 4 6 6 7 8 9 11 14 14 17 18 21 22 25 26 27 29 31 32 LCS_GDT A 21 A 21 4 5 20 4 4 4 6 7 9 11 13 14 14 17 19 21 22 25 26 27 29 31 32 LCS_GDT S 22 S 22 4 5 21 4 4 4 5 6 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT L 23 L 23 3 3 21 3 3 3 3 5 5 8 9 12 15 16 19 21 22 25 26 27 29 31 32 LCS_GDT A 24 A 24 3 3 21 3 3 4 5 6 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT A 25 A 25 3 5 21 0 3 4 4 5 5 6 9 10 14 16 19 21 22 25 26 27 29 31 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 5 5 6 7 10 13 16 19 20 22 25 26 27 29 31 32 LCS_GDT E 27 E 27 3 6 21 3 3 4 6 6 6 8 9 11 14 15 17 20 22 25 26 27 29 31 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 5 6 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT R 29 R 29 4 6 21 3 4 4 5 6 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT V 30 V 30 4 6 21 3 4 4 5 8 8 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT T 31 T 31 4 6 21 3 4 4 5 8 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT E 32 E 32 4 7 21 3 4 4 5 6 7 9 9 12 14 15 17 20 22 24 26 26 28 31 32 LCS_GDT R 33 R 33 3 7 21 3 3 5 5 8 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT P 34 P 34 5 7 21 2 4 6 6 8 8 10 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT F 35 F 35 5 7 21 3 4 6 6 8 8 10 13 14 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT W 36 W 36 5 7 21 3 5 6 6 8 8 9 9 11 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT I 37 I 37 5 7 21 3 4 6 6 8 8 9 9 11 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT S 38 S 38 5 7 21 3 4 6 6 8 8 9 9 11 14 15 18 20 22 25 26 26 29 31 32 LCS_GDT S 39 S 39 3 6 21 3 3 3 4 5 7 8 9 11 15 17 19 21 22 25 26 27 29 31 32 LCS_GDT F 40 F 40 3 5 21 3 3 3 4 5 7 8 9 9 13 16 19 20 22 25 26 26 28 31 32 LCS_GDT I 41 I 41 3 4 21 3 3 3 3 4 6 8 9 10 13 16 19 21 22 25 26 26 29 31 32 LCS_GDT G 42 G 42 3 4 21 3 3 3 3 4 7 8 9 10 13 16 19 21 22 25 26 26 29 31 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 3 4 5 6 9 9 10 11 13 13 14 15 16 18 21 23 26 LCS_GDT S 44 S 44 3 4 13 3 3 3 3 4 7 8 9 9 10 11 13 13 14 15 16 18 21 22 24 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 4 7 8 9 9 10 11 12 12 14 15 16 18 21 22 24 LCS_AVERAGE LCS_A: 20.87 ( 9.04 13.33 40.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 6 8 9 11 13 14 15 17 19 21 22 25 26 27 29 31 32 GDT PERCENT_AT 9.09 11.36 13.64 13.64 18.18 20.45 25.00 29.55 31.82 34.09 38.64 43.18 47.73 50.00 56.82 59.09 61.36 65.91 70.45 72.73 GDT RMS_LOCAL 0.27 0.59 0.77 0.77 1.92 2.47 2.62 3.09 3.34 3.88 4.20 4.41 4.67 4.85 5.26 5.39 6.07 6.34 6.55 6.70 GDT RMS_ALL_AT 19.84 15.78 16.03 16.03 14.94 13.25 13.32 12.81 12.48 13.70 12.51 13.31 13.08 13.14 13.42 13.51 11.63 12.00 12.16 11.92 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.039 0 0.424 0.459 4.214 39.545 32.727 - LGA V 3 V 3 1.535 0 0.026 1.022 3.724 59.091 50.130 3.724 LGA Q 4 Q 4 2.639 0 0.189 0.933 8.075 25.000 15.354 3.973 LGA G 5 G 5 6.824 0 0.147 0.147 8.608 0.000 0.000 - LGA P 6 P 6 8.887 0 0.675 0.600 10.224 0.000 0.000 10.018 LGA W 7 W 7 10.695 0 0.386 1.173 16.779 0.000 0.000 15.115 LGA V 8 V 8 10.642 0 0.629 0.699 11.462 0.000 0.000 10.914 LGA G 9 G 9 12.601 0 0.567 0.567 14.573 0.000 0.000 - LGA S 10 S 10 17.749 0 0.575 0.851 21.337 0.000 0.000 20.138 LGA S 11 S 11 21.730 0 0.597 0.568 23.602 0.000 0.000 23.602 LGA Y 12 Y 12 23.325 0 0.075 1.187 24.971 0.000 0.000 18.705 LGA V 13 V 13 22.432 0 0.475 0.509 24.192 0.000 0.000 21.487 LGA A 14 A 14 28.203 0 0.117 0.114 30.306 0.000 0.000 - LGA E 15 E 15 29.395 0 0.038 1.648 32.241 0.000 0.000 31.495 LGA T 16 T 16 22.928 0 0.138 1.172 25.005 0.000 0.000 20.516 LGA G 17 G 17 22.504 0 0.458 0.458 22.607 0.000 0.000 - LGA Q 18 Q 18 15.773 0 0.448 0.420 18.599 0.000 0.000 15.599 LGA N 19 N 19 12.128 0 0.063 1.129 14.041 0.000 0.000 12.405 LGA W 20 W 20 6.206 0 0.169 0.291 14.178 2.727 0.779 13.628 LGA A 21 A 21 2.541 0 0.532 0.484 3.128 33.182 30.182 - LGA S 22 S 22 2.766 0 0.554 0.819 4.852 23.636 19.091 4.852 LGA L 23 L 23 5.418 0 0.630 1.447 12.149 4.091 2.045 9.778 LGA A 24 A 24 3.136 0 0.605 0.578 4.884 10.909 9.091 - LGA A 25 A 25 6.842 0 0.579 0.584 7.879 0.000 0.000 - LGA N 26 N 26 9.070 0 0.617 1.342 14.729 0.000 0.000 14.650 LGA E 27 E 27 7.180 0 0.058 1.012 12.818 0.000 0.000 12.818 LGA L 28 L 28 2.868 0 0.610 0.580 5.152 33.636 28.864 2.522 LGA R 29 R 29 3.053 0 0.543 1.449 4.752 15.000 10.909 4.752 LGA V 30 V 30 3.980 0 0.072 0.082 5.677 18.636 10.909 5.677 LGA T 31 T 31 3.560 0 0.664 0.633 3.973 10.909 14.286 3.973 LGA E 32 E 32 6.072 0 0.684 1.349 13.328 0.455 0.202 12.247 LGA R 33 R 33 2.256 0 0.608 1.178 14.624 42.273 15.868 14.624 LGA P 34 P 34 4.421 0 0.072 0.418 7.905 13.182 7.532 7.905 LGA F 35 F 35 3.304 0 0.116 1.074 6.828 7.273 10.579 5.516 LGA W 36 W 36 8.406 0 0.040 0.896 19.150 0.000 0.000 19.150 LGA I 37 I 37 9.284 0 0.404 1.374 10.655 0.000 0.000 10.655 LGA S 38 S 38 11.776 0 0.158 0.613 13.582 0.000 0.000 13.306 LGA S 39 S 39 8.718 0 0.688 0.818 10.456 0.000 0.000 10.456 LGA F 40 F 40 10.613 0 0.638 0.752 16.254 0.000 0.000 15.752 LGA I 41 I 41 9.246 0 0.074 0.095 9.917 0.000 0.000 8.776 LGA G 42 G 42 9.046 0 0.617 0.617 9.971 0.000 0.000 - LGA R 43 R 43 14.157 0 0.195 1.031 22.759 0.000 0.000 22.495 LGA S 44 S 44 16.101 0 0.651 0.806 17.701 0.000 0.000 15.045 LGA K 45 K 45 16.379 0 0.044 0.814 18.629 0.000 0.000 18.629 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.658 10.537 11.560 7.717 5.876 1.818 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.09 28.409 24.464 0.408 LGA_LOCAL RMSD: 3.090 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.812 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.658 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.746368 * X + 0.360120 * Y + -0.559687 * Z + -0.955444 Y_new = 0.605901 * X + -0.019739 * Y + 0.795295 * Z + 60.538654 Z_new = 0.275354 * X + -0.932697 * Y + -0.232929 * Z + -27.880413 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.681894 -0.278958 -1.815528 [DEG: 39.0697 -15.9831 -104.0221 ] ZXZ: -2.528356 1.805885 2.854524 [DEG: -144.8642 103.4696 163.5522 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS208_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS208_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.09 24.464 10.66 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS208_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 REFINED PARENT N/A ATOM 525 N ALA 2 13.054 36.359 13.571 1.00 3.60 ATOM 526 CA ALA 2 13.276 36.609 12.140 1.00 3.60 ATOM 527 C ALA 2 12.023 36.211 11.328 1.00 3.60 ATOM 528 O ALA 2 12.069 35.316 10.479 1.00 3.60 ATOM 529 CB ALA 2 14.557 35.879 11.703 1.00 3.71 ATOM 530 N VAL 3 10.868 36.802 11.668 1.00 3.08 ATOM 531 CA VAL 3 9.554 36.377 11.149 1.00 3.08 ATOM 532 C VAL 3 9.445 36.522 9.623 1.00 3.08 ATOM 533 O VAL 3 9.896 37.508 9.041 1.00 3.08 ATOM 534 CB VAL 3 8.388 37.074 11.889 1.00 3.07 ATOM 535 CG1 VAL 3 8.176 38.543 11.509 1.00 3.07 ATOM 536 CG2 VAL 3 7.057 36.346 11.654 1.00 3.07 ATOM 537 N GLN 4 8.815 35.540 8.981 1.00 2.86 ATOM 538 CA GLN 4 8.426 35.548 7.569 1.00 2.86 ATOM 539 C GLN 4 7.109 34.767 7.461 1.00 2.86 ATOM 540 O GLN 4 7.114 33.534 7.520 1.00 2.86 ATOM 541 CB GLN 4 9.572 34.964 6.720 1.00 3.39 ATOM 542 CG GLN 4 9.221 34.816 5.229 1.00 3.39 ATOM 543 CD GLN 4 10.358 34.219 4.392 1.00 3.39 ATOM 544 OE1 GLN 4 11.495 34.058 4.821 1.00 3.39 ATOM 545 NE2 GLN 4 10.094 33.861 3.152 1.00 3.39 ATOM 546 N GLY 5 5.978 35.476 7.376 1.00 2.86 ATOM 547 CA GLY 5 4.648 34.869 7.520 1.00 2.86 ATOM 548 C GLY 5 3.547 35.442 6.616 1.00 2.86 ATOM 549 O GLY 5 3.466 36.665 6.462 1.00 2.86 ATOM 550 N PRO 6 2.696 34.583 6.018 1.00 2.75 ATOM 551 CA PRO 6 1.453 34.993 5.366 1.00 2.75 ATOM 552 C PRO 6 0.266 35.036 6.346 1.00 2.75 ATOM 553 O PRO 6 0.157 34.193 7.243 1.00 2.75 ATOM 554 CB PRO 6 1.182 33.965 4.256 1.00 2.97 ATOM 555 CG PRO 6 2.476 33.162 4.150 1.00 2.97 ATOM 556 CD PRO 6 3.032 33.240 5.568 1.00 2.97 ATOM 557 N TRP 7 -0.677 35.953 6.108 1.00 2.76 ATOM 558 CA TRP 7 -1.996 36.007 6.756 1.00 2.76 ATOM 559 C TRP 7 -3.097 36.270 5.720 1.00 2.76 ATOM 560 O TRP 7 -2.889 36.991 4.738 1.00 2.76 ATOM 561 CB TRP 7 -2.044 37.043 7.892 1.00 3.23 ATOM 562 CG TRP 7 -1.199 36.739 9.091 1.00 3.23 ATOM 563 CD1 TRP 7 -1.635 36.101 10.200 1.00 3.23 ATOM 564 CD2 TRP 7 0.218 37.013 9.324 1.00 3.23 ATOM 565 NE1 TRP 7 -0.590 35.934 11.090 1.00 3.23 ATOM 566 CE2 TRP 7 0.579 36.467 10.594 1.00 3.23 ATOM 567 CE3 TRP 7 1.235 37.672 8.599 1.00 3.23 ATOM 568 CZ2 TRP 7 1.886 36.531 11.101 1.00 3.23 ATOM 569 CZ3 TRP 7 2.543 37.768 9.115 1.00 3.23 ATOM 570 CH2 TRP 7 2.876 37.184 10.348 1.00 3.23 ATOM 571 N VAL 8 -4.280 35.688 5.950 1.00 2.91 ATOM 572 CA VAL 8 -5.437 35.769 5.040 1.00 2.91 ATOM 573 C VAL 8 -6.676 36.251 5.790 1.00 2.91 ATOM 574 O VAL 8 -7.137 35.588 6.721 1.00 2.91 ATOM 575 CB VAL 8 -5.738 34.423 4.337 1.00 3.11 ATOM 576 CG1 VAL 8 -6.768 34.615 3.215 1.00 3.11 ATOM 577 CG2 VAL 8 -4.489 33.743 3.760 1.00 3.11 ATOM 578 N GLY 9 -7.226 37.392 5.374 1.00 2.94 ATOM 579 CA GLY 9 -8.548 37.853 5.810 1.00 2.94 ATOM 580 C GLY 9 -9.587 37.330 4.818 1.00 2.94 ATOM 581 O GLY 9 -9.474 37.623 3.631 1.00 2.94 ATOM 582 N SER 10 -10.557 36.512 5.233 1.00 3.43 ATOM 583 CA SER 10 -11.425 35.808 4.270 1.00 3.43 ATOM 584 C SER 10 -12.384 36.755 3.528 1.00 3.43 ATOM 585 O SER 10 -13.394 37.206 4.079 1.00 3.43 ATOM 586 CB SER 10 -12.170 34.664 4.957 1.00 3.59 ATOM 587 OG SER 10 -12.820 33.863 3.985 1.00 3.59 ATOM 588 N SER 11 -12.057 37.077 2.270 1.00 3.36 ATOM 589 CA SER 11 -12.837 37.991 1.424 1.00 3.36 ATOM 590 C SER 11 -14.204 37.404 1.049 1.00 3.36 ATOM 591 O SER 11 -14.344 36.190 0.884 1.00 3.36 ATOM 592 CB SER 11 -12.035 38.383 0.178 1.00 3.39 ATOM 593 OG SER 11 -12.689 39.430 -0.518 1.00 3.39 ATOM 594 N TYR 12 -15.222 38.263 0.936 1.00 3.85 ATOM 595 CA TYR 12 -16.644 37.954 0.700 1.00 3.85 ATOM 596 C TYR 12 -17.383 37.146 1.795 1.00 3.85 ATOM 597 O TYR 12 -18.610 37.256 1.876 1.00 3.85 ATOM 598 CB TYR 12 -16.859 37.285 -0.673 1.00 4.39 ATOM 599 CG TYR 12 -16.064 37.830 -1.849 1.00 4.39 ATOM 600 CD1 TYR 12 -15.140 36.996 -2.511 1.00 4.39 ATOM 601 CD2 TYR 12 -16.283 39.142 -2.314 1.00 4.39 ATOM 602 CE1 TYR 12 -14.441 37.465 -3.640 1.00 4.39 ATOM 603 CE2 TYR 12 -15.582 39.616 -3.441 1.00 4.39 ATOM 604 CZ TYR 12 -14.662 38.779 -4.110 1.00 4.39 ATOM 605 OH TYR 12 -14.005 39.238 -5.213 1.00 4.39 ATOM 606 N VAL 13 -16.700 36.354 2.637 1.00 4.04 ATOM 607 CA VAL 13 -17.312 35.456 3.652 1.00 4.04 ATOM 608 C VAL 13 -17.755 36.216 4.922 1.00 4.04 ATOM 609 O VAL 13 -17.351 35.922 6.052 1.00 4.04 ATOM 610 CB VAL 13 -16.432 34.217 3.951 1.00 4.05 ATOM 611 CG1 VAL 13 -17.215 33.116 4.688 1.00 4.05 ATOM 612 CG2 VAL 13 -15.900 33.557 2.670 1.00 4.05 ATOM 613 N ALA 14 -18.576 37.250 4.732 1.00 4.04 ATOM 614 CA ALA 14 -19.055 38.157 5.774 1.00 4.04 ATOM 615 C ALA 14 -19.986 37.488 6.812 1.00 4.04 ATOM 616 O ALA 14 -20.140 38.008 7.919 1.00 4.04 ATOM 617 CB ALA 14 -19.751 39.333 5.078 1.00 4.08 ATOM 618 N GLU 15 -20.580 36.330 6.495 1.00 4.55 ATOM 619 CA GLU 15 -21.406 35.546 7.426 1.00 4.55 ATOM 620 C GLU 15 -20.597 34.976 8.611 1.00 4.55 ATOM 621 O GLU 15 -21.138 34.824 9.710 1.00 4.55 ATOM 622 CB GLU 15 -22.163 34.432 6.672 1.00 5.05 ATOM 623 CG GLU 15 -21.325 33.315 6.017 1.00 5.05 ATOM 624 CD GLU 15 -20.962 33.583 4.541 1.00 5.05 ATOM 625 OE1 GLU 15 -20.624 34.737 4.181 1.00 5.05 ATOM 626 OE2 GLU 15 -20.997 32.626 3.730 1.00 5.05 ATOM 627 N THR 16 -19.299 34.703 8.410 1.00 4.40 ATOM 628 CA THR 16 -18.358 34.278 9.464 1.00 4.40 ATOM 629 C THR 16 -17.596 35.472 10.054 1.00 4.40 ATOM 630 O THR 16 -17.413 35.547 11.270 1.00 4.40 ATOM 631 CB THR 16 -17.399 33.199 8.927 1.00 4.47 ATOM 632 OG1 THR 16 -18.148 32.053 8.565 1.00 4.47 ATOM 633 CG2 THR 16 -16.351 32.750 9.950 1.00 4.47 ATOM 634 N GLY 17 -17.187 36.435 9.216 1.00 3.92 ATOM 635 CA GLY 17 -16.573 37.700 9.643 1.00 3.92 ATOM 636 C GLY 17 -15.119 37.549 10.103 1.00 3.92 ATOM 637 O GLY 17 -14.196 37.670 9.298 1.00 3.92 ATOM 638 N GLN 18 -14.909 37.274 11.395 1.00 3.77 ATOM 639 CA GLN 18 -13.596 37.155 12.058 1.00 3.77 ATOM 640 C GLN 18 -12.875 35.820 11.746 1.00 3.77 ATOM 641 O GLN 18 -12.363 35.143 12.642 1.00 3.77 ATOM 642 CB GLN 18 -13.760 37.390 13.576 1.00 4.02 ATOM 643 CG GLN 18 -14.409 38.732 13.965 1.00 4.02 ATOM 644 CD GLN 18 -13.580 39.974 13.629 1.00 4.02 ATOM 645 OE1 GLN 18 -12.403 39.930 13.291 1.00 4.02 ATOM 646 NE2 GLN 18 -14.167 41.146 13.736 1.00 4.02 ATOM 647 N ASN 19 -12.853 35.411 10.471 1.00 3.81 ATOM 648 CA ASN 19 -12.328 34.117 10.024 1.00 3.81 ATOM 649 C ASN 19 -10.802 33.980 10.218 1.00 3.81 ATOM 650 O ASN 19 -10.366 32.935 10.698 1.00 3.81 ATOM 651 CB ASN 19 -12.736 33.922 8.552 1.00 4.02 ATOM 652 CG ASN 19 -12.246 32.595 7.984 1.00 4.02 ATOM 653 OD1 ASN 19 -11.112 32.463 7.549 1.00 4.02 ATOM 654 ND2 ASN 19 -13.078 31.578 7.958 1.00 4.02 ATOM 655 N TRP 20 -10.035 35.022 9.842 1.00 3.38 ATOM 656 CA TRP 20 -8.572 35.205 9.977 1.00 3.38 ATOM 657 C TRP 20 -7.713 33.920 10.008 1.00 3.38 ATOM 658 O TRP 20 -7.622 33.242 11.037 1.00 3.38 ATOM 659 CB TRP 20 -8.267 36.031 11.236 1.00 3.01 ATOM 660 CG TRP 20 -8.643 37.484 11.244 1.00 3.01 ATOM 661 CD1 TRP 20 -9.756 37.993 11.817 1.00 3.01 ATOM 662 CD2 TRP 20 -7.851 38.641 10.819 1.00 3.01 ATOM 663 NE1 TRP 20 -9.712 39.373 11.785 1.00 3.01 ATOM 664 CE2 TRP 20 -8.529 39.828 11.241 1.00 3.01 ATOM 665 CE3 TRP 20 -6.580 38.809 10.219 1.00 3.01 ATOM 666 CZ2 TRP 20 -7.957 41.104 11.120 1.00 3.01 ATOM 667 CZ3 TRP 20 -5.998 40.087 10.090 1.00 3.01 ATOM 668 CH2 TRP 20 -6.674 41.230 10.559 1.00 3.01 ATOM 669 N ALA 21 -6.972 33.638 8.927 1.00 3.48 ATOM 670 CA ALA 21 -5.938 32.593 8.914 1.00 3.48 ATOM 671 C ALA 21 -4.716 33.040 9.752 1.00 3.48 ATOM 672 O ALA 21 -3.723 33.550 9.225 1.00 3.48 ATOM 673 CB ALA 21 -5.582 32.242 7.464 1.00 3.45 ATOM 674 N SER 22 -4.832 32.921 11.078 1.00 3.42 ATOM 675 CA SER 22 -3.892 33.466 12.063 1.00 3.42 ATOM 676 C SER 22 -2.681 32.547 12.271 1.00 3.42 ATOM 677 O SER 22 -2.677 31.668 13.138 1.00 3.42 ATOM 678 CB SER 22 -4.629 33.770 13.373 1.00 3.60 ATOM 679 OG SER 22 -3.777 34.485 14.257 1.00 3.60 ATOM 680 N LEU 23 -1.641 32.740 11.451 1.00 3.50 ATOM 681 CA LEU 23 -0.331 32.113 11.643 1.00 3.50 ATOM 682 C LEU 23 0.307 32.612 12.955 1.00 3.50 ATOM 683 O LEU 23 0.392 33.822 13.187 1.00 3.50 ATOM 684 CB LEU 23 0.541 32.415 10.409 1.00 3.65 ATOM 685 CG LEU 23 2.008 31.957 10.513 1.00 3.65 ATOM 686 CD1 LEU 23 2.142 30.438 10.643 1.00 3.65 ATOM 687 CD2 LEU 23 2.761 32.391 9.258 1.00 3.65 ATOM 688 N ALA 24 0.756 31.685 13.808 1.00 3.74 ATOM 689 CA ALA 24 1.385 32.006 15.090 1.00 3.74 ATOM 690 C ALA 24 2.778 32.648 14.914 1.00 3.74 ATOM 691 O ALA 24 3.590 32.191 14.104 1.00 3.74 ATOM 692 CB ALA 24 1.457 30.734 15.944 1.00 3.86 ATOM 693 N ALA 25 3.058 33.688 15.707 1.00 3.44 ATOM 694 CA ALA 25 4.330 34.415 15.729 1.00 3.44 ATOM 695 C ALA 25 4.542 35.163 17.064 1.00 3.44 ATOM 696 O ALA 25 3.584 35.520 17.757 1.00 3.44 ATOM 697 CB ALA 25 4.356 35.390 14.542 1.00 3.38 ATOM 698 N ASN 26 5.805 35.431 17.411 1.00 3.50 ATOM 699 CA ASN 26 6.187 36.240 18.574 1.00 3.50 ATOM 700 C ASN 26 5.717 37.704 18.419 1.00 3.50 ATOM 701 O ASN 26 5.901 38.307 17.363 1.00 3.50 ATOM 702 CB ASN 26 7.715 36.128 18.751 1.00 3.67 ATOM 703 CG ASN 26 8.269 37.028 19.845 1.00 3.67 ATOM 704 OD1 ASN 26 9.037 37.945 19.594 1.00 3.67 ATOM 705 ND2 ASN 26 7.884 36.818 21.086 1.00 3.67 ATOM 706 N GLU 27 5.116 38.264 19.478 1.00 3.32 ATOM 707 CA GLU 27 4.561 39.632 19.604 1.00 3.32 ATOM 708 C GLU 27 3.447 40.057 18.618 1.00 3.32 ATOM 709 O GLU 27 2.627 40.904 18.974 1.00 3.32 ATOM 710 CB GLU 27 5.691 40.678 19.621 1.00 3.74 ATOM 711 CG GLU 27 6.662 40.571 20.809 1.00 3.74 ATOM 712 CD GLU 27 6.005 40.772 22.192 1.00 3.74 ATOM 713 OE1 GLU 27 4.970 41.475 22.310 1.00 3.74 ATOM 714 OE2 GLU 27 6.538 40.229 23.191 1.00 3.74 ATOM 715 N LEU 28 3.360 39.492 17.409 1.00 2.96 ATOM 716 CA LEU 28 2.282 39.779 16.450 1.00 2.96 ATOM 717 C LEU 28 0.924 39.279 16.969 1.00 2.96 ATOM 718 O LEU 28 0.839 38.201 17.566 1.00 2.96 ATOM 719 CB LEU 28 2.594 39.163 15.074 1.00 2.91 ATOM 720 CG LEU 28 3.948 39.558 14.456 1.00 2.91 ATOM 721 CD1 LEU 28 4.071 38.924 13.074 1.00 2.91 ATOM 722 CD2 LEU 28 4.104 41.073 14.298 1.00 2.91 ATOM 723 N ARG 29 -0.143 40.054 16.737 1.00 3.09 ATOM 724 CA ARG 29 -1.509 39.768 17.219 1.00 3.09 ATOM 725 C ARG 29 -2.578 40.208 16.216 1.00 3.09 ATOM 726 O ARG 29 -2.386 41.149 15.446 1.00 3.09 ATOM 727 CB ARG 29 -1.768 40.453 18.581 1.00 3.82 ATOM 728 CG ARG 29 -0.889 39.998 19.759 1.00 3.82 ATOM 729 CD ARG 29 -1.146 38.545 20.175 1.00 3.82 ATOM 730 NE ARG 29 -0.271 38.146 21.296 1.00 3.82 ATOM 731 CZ ARG 29 0.852 37.451 21.236 1.00 3.82 ATOM 732 NH1 ARG 29 1.456 37.099 22.335 1.00 3.82 ATOM 733 NH2 ARG 29 1.399 37.093 20.107 1.00 3.82 ATOM 734 N VAL 30 -3.727 39.541 16.289 1.00 3.08 ATOM 735 CA VAL 30 -4.953 39.830 15.530 1.00 3.08 ATOM 736 C VAL 30 -6.085 40.119 16.520 1.00 3.08 ATOM 737 O VAL 30 -6.292 39.337 17.451 1.00 3.08 ATOM 738 CB VAL 30 -5.310 38.624 14.637 1.00 3.13 ATOM 739 CG1 VAL 30 -6.687 38.766 13.985 1.00 3.13 ATOM 740 CG2 VAL 30 -4.283 38.425 13.516 1.00 3.13 ATOM 741 N THR 31 -6.836 41.204 16.315 1.00 3.25 ATOM 742 CA THR 31 -8.035 41.538 17.112 1.00 3.25 ATOM 743 C THR 31 -9.224 41.925 16.212 1.00 3.25 ATOM 744 O THR 31 -9.186 41.716 14.998 1.00 3.25 ATOM 745 CB THR 31 -7.733 42.580 18.213 1.00 3.32 ATOM 746 OG1 THR 31 -7.628 43.874 17.671 1.00 3.32 ATOM 747 CG2 THR 31 -6.455 42.311 19.011 1.00 3.32 ATOM 748 N GLU 32 -10.320 42.433 16.794 1.00 3.35 ATOM 749 CA GLU 32 -11.621 42.635 16.124 1.00 3.35 ATOM 750 C GLU 32 -11.592 43.533 14.870 1.00 3.35 ATOM 751 O GLU 32 -12.460 43.399 14.003 1.00 3.35 ATOM 752 CB GLU 32 -12.630 43.211 17.133 1.00 3.87 ATOM 753 CG GLU 32 -12.861 42.290 18.343 1.00 3.87 ATOM 754 CD GLU 32 -14.040 42.752 19.226 1.00 3.87 ATOM 755 OE1 GLU 32 -14.226 43.976 19.438 1.00 3.87 ATOM 756 OE2 GLU 32 -14.785 41.882 19.742 1.00 3.87 ATOM 757 N ARG 33 -10.600 44.429 14.749 1.00 2.92 ATOM 758 CA ARG 33 -10.352 45.249 13.547 1.00 2.92 ATOM 759 C ARG 33 -8.867 45.257 13.118 1.00 2.92 ATOM 760 O ARG 33 -8.609 44.928 11.958 1.00 2.92 ATOM 761 CB ARG 33 -10.965 46.664 13.701 1.00 3.72 ATOM 762 CG ARG 33 -12.504 46.680 13.758 1.00 3.72 ATOM 763 CD ARG 33 -13.028 48.105 13.991 1.00 3.72 ATOM 764 NE ARG 33 -14.498 48.128 14.146 1.00 3.72 ATOM 765 CZ ARG 33 -15.229 49.115 14.642 1.00 3.72 ATOM 766 NH1 ARG 33 -16.523 48.997 14.738 1.00 3.72 ATOM 767 NH2 ARG 33 -14.701 50.235 15.054 1.00 3.72 ATOM 768 N PRO 34 -7.889 45.619 13.978 1.00 2.58 ATOM 769 CA PRO 34 -6.492 45.763 13.564 1.00 2.58 ATOM 770 C PRO 34 -5.620 44.495 13.654 1.00 2.58 ATOM 771 O PRO 34 -5.847 43.584 14.456 1.00 2.58 ATOM 772 CB PRO 34 -5.924 46.843 14.489 1.00 2.74 ATOM 773 CG PRO 34 -6.650 46.556 15.800 1.00 2.74 ATOM 774 CD PRO 34 -8.052 46.199 15.310 1.00 2.74 ATOM 775 N PHE 35 -4.558 44.500 12.845 1.00 2.45 ATOM 776 CA PHE 35 -3.403 43.602 12.919 1.00 2.45 ATOM 777 C PHE 35 -2.252 44.371 13.600 1.00 2.45 ATOM 778 O PHE 35 -1.888 45.459 13.139 1.00 2.45 ATOM 779 CB PHE 35 -3.019 43.165 11.498 1.00 2.58 ATOM 780 CG PHE 35 -1.860 42.189 11.421 1.00 2.58 ATOM 781 CD1 PHE 35 -2.114 40.806 11.356 1.00 2.58 ATOM 782 CD2 PHE 35 -0.528 42.648 11.410 1.00 2.58 ATOM 783 CE1 PHE 35 -1.051 39.889 11.301 1.00 2.58 ATOM 784 CE2 PHE 35 0.538 41.731 11.357 1.00 2.58 ATOM 785 CZ PHE 35 0.277 40.349 11.303 1.00 2.58 ATOM 786 N TRP 36 -1.698 43.850 14.699 1.00 2.55 ATOM 787 CA TRP 36 -0.620 44.499 15.467 1.00 2.55 ATOM 788 C TRP 36 0.777 44.097 14.968 1.00 2.55 ATOM 789 O TRP 36 1.016 42.938 14.629 1.00 2.55 ATOM 790 CB TRP 36 -0.738 44.175 16.965 1.00 3.34 ATOM 791 CG TRP 36 -1.970 44.612 17.707 1.00 3.34 ATOM 792 CD1 TRP 36 -2.992 45.359 17.226 1.00 3.34 ATOM 793 CD2 TRP 36 -2.311 44.340 19.103 1.00 3.34 ATOM 794 NE1 TRP 36 -3.943 45.542 18.211 1.00 3.34 ATOM 795 CE2 TRP 36 -3.586 44.917 19.384 1.00 3.34 ATOM 796 CE3 TRP 36 -1.674 43.654 20.162 1.00 3.34 ATOM 797 CZ2 TRP 36 -4.209 44.799 20.635 1.00 3.34 ATOM 798 CZ3 TRP 36 -2.293 43.520 21.421 1.00 3.34 ATOM 799 CH2 TRP 36 -3.559 44.087 21.658 1.00 3.34 ATOM 800 N ILE 37 1.727 45.045 15.002 1.00 2.42 ATOM 801 CA ILE 37 3.100 44.884 14.481 1.00 2.42 ATOM 802 C ILE 37 4.135 45.147 15.598 1.00 2.42 ATOM 803 O ILE 37 4.989 46.027 15.507 1.00 2.42 ATOM 804 CB ILE 37 3.319 45.706 13.178 1.00 2.32 ATOM 805 CG1 ILE 37 2.100 45.629 12.223 1.00 2.32 ATOM 806 CG2 ILE 37 4.588 45.200 12.456 1.00 2.32 ATOM 807 CD1 ILE 37 2.269 46.385 10.900 1.00 2.32 ATOM 808 N SER 38 4.012 44.400 16.702 1.00 2.84 ATOM 809 CA SER 38 4.846 44.532 17.915 1.00 2.84 ATOM 810 C SER 38 6.184 43.768 17.889 1.00 2.84 ATOM 811 O SER 38 6.853 43.689 18.919 1.00 2.84 ATOM 812 CB SER 38 4.022 44.164 19.155 1.00 3.06 ATOM 813 OG SER 38 2.913 45.040 19.278 1.00 3.06 ATOM 814 N SER 39 6.594 43.192 16.751 1.00 2.92 ATOM 815 CA SER 39 7.955 42.646 16.582 1.00 2.92 ATOM 816 C SER 39 8.964 43.755 16.235 1.00 2.92 ATOM 817 O SER 39 8.599 44.766 15.626 1.00 2.92 ATOM 818 CB SER 39 7.979 41.525 15.536 1.00 2.86 ATOM 819 OG SER 39 9.241 40.879 15.525 1.00 2.86 ATOM 820 N PHE 40 10.235 43.567 16.608 1.00 2.93 ATOM 821 CA PHE 40 11.308 44.563 16.476 1.00 2.93 ATOM 822 C PHE 40 12.555 43.951 15.816 1.00 2.93 ATOM 823 O PHE 40 13.034 42.894 16.240 1.00 2.93 ATOM 824 CB PHE 40 11.639 45.158 17.860 1.00 3.47 ATOM 825 CG PHE 40 10.437 45.595 18.684 1.00 3.47 ATOM 826 CD1 PHE 40 9.562 46.587 18.199 1.00 3.47 ATOM 827 CD2 PHE 40 10.166 44.976 19.921 1.00 3.47 ATOM 828 CE1 PHE 40 8.411 46.934 18.930 1.00 3.47 ATOM 829 CE2 PHE 40 9.027 45.337 20.661 1.00 3.47 ATOM 830 CZ PHE 40 8.144 46.309 20.160 1.00 3.47 ATOM 831 N ILE 41 13.101 44.615 14.789 1.00 2.96 ATOM 832 CA ILE 41 14.272 44.125 14.041 1.00 2.96 ATOM 833 C ILE 41 15.551 44.332 14.871 1.00 2.96 ATOM 834 O ILE 41 15.995 45.465 15.071 1.00 2.96 ATOM 835 CB ILE 41 14.353 44.781 12.638 1.00 2.87 ATOM 836 CG1 ILE 41 13.122 44.378 11.792 1.00 2.87 ATOM 837 CG2 ILE 41 15.654 44.369 11.921 1.00 2.87 ATOM 838 CD1 ILE 41 13.012 45.104 10.447 1.00 2.87 ATOM 839 N GLY 42 16.147 43.235 15.345 1.00 3.46 ATOM 840 CA GLY 42 17.445 43.219 16.032 1.00 3.46 ATOM 841 C GLY 42 18.601 42.940 15.064 1.00 3.46 ATOM 842 O GLY 42 18.566 41.950 14.326 1.00 3.46 ATOM 843 N ARG 43 19.629 43.804 15.076 1.00 3.60 ATOM 844 CA ARG 43 20.804 43.763 14.173 1.00 3.60 ATOM 845 C ARG 43 20.395 43.716 12.682 1.00 3.60 ATOM 846 O ARG 43 19.341 44.232 12.305 1.00 3.60 ATOM 847 CB ARG 43 21.779 42.645 14.630 1.00 4.38 ATOM 848 CG ARG 43 22.312 42.884 16.056 1.00 4.38 ATOM 849 CD ARG 43 23.314 41.812 16.509 1.00 4.38 ATOM 850 NE ARG 43 24.626 41.934 15.836 1.00 4.38 ATOM 851 CZ ARG 43 25.699 41.196 16.071 1.00 4.38 ATOM 852 NH1 ARG 43 26.823 41.447 15.463 1.00 4.38 ATOM 853 NH2 ARG 43 25.685 40.199 16.914 1.00 4.38 ATOM 854 N SER 44 21.241 43.146 11.824 1.00 3.38 ATOM 855 CA SER 44 21.121 43.128 10.354 1.00 3.38 ATOM 856 C SER 44 20.104 42.116 9.778 1.00 3.38 ATOM 857 O SER 44 20.063 41.901 8.561 1.00 3.38 ATOM 858 CB SER 44 22.519 42.911 9.756 1.00 3.56 ATOM 859 OG SER 44 23.091 41.698 10.234 1.00 3.56 ATOM 860 N LYS 45 19.286 41.470 10.625 1.00 3.19 ATOM 861 CA LYS 45 18.310 40.433 10.234 1.00 3.19 ATOM 862 C LYS 45 17.121 41.001 9.440 1.00 3.19 ATOM 863 O LYS 45 16.723 42.152 9.620 1.00 3.19 ATOM 864 CB LYS 45 17.833 39.661 11.481 1.00 3.60 ATOM 865 CG LYS 45 19.001 38.962 12.198 1.00 3.60 ATOM 866 CD LYS 45 18.540 38.124 13.398 1.00 3.60 ATOM 867 CE LYS 45 19.776 37.544 14.102 1.00 3.60 ATOM 868 NZ LYS 45 19.414 36.681 15.260 1.00 3.60 TER END