####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS288_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 4 - 21 4.94 16.56 LONGEST_CONTINUOUS_SEGMENT: 18 5 - 22 4.70 16.76 LCS_AVERAGE: 35.64 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 6 - 13 1.44 14.20 LONGEST_CONTINUOUS_SEGMENT: 8 8 - 15 1.94 14.42 LONGEST_CONTINUOUS_SEGMENT: 8 9 - 16 1.65 15.95 LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.79 15.01 LCS_AVERAGE: 14.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 6 - 10 0.68 13.79 LONGEST_CONTINUOUS_SEGMENT: 5 11 - 15 0.89 16.03 LONGEST_CONTINUOUS_SEGMENT: 5 16 - 20 0.72 18.10 LONGEST_CONTINUOUS_SEGMENT: 5 23 - 27 0.87 20.44 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 0.94 21.28 LCS_AVERAGE: 10.12 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 10 4 4 4 5 6 6 8 9 10 13 14 16 20 20 22 22 24 25 28 31 LCS_GDT V 3 V 3 4 5 11 4 4 4 5 6 6 8 9 10 12 14 15 20 20 22 22 24 25 28 31 LCS_GDT Q 4 Q 4 4 5 18 4 4 4 5 6 6 8 9 10 11 13 15 16 19 21 22 24 25 28 31 LCS_GDT G 5 G 5 4 5 18 4 4 4 5 6 6 8 10 12 14 17 17 17 19 21 22 24 25 27 29 LCS_GDT P 6 P 6 5 8 18 3 5 7 8 9 10 11 11 12 14 17 17 17 19 21 22 24 25 27 29 LCS_GDT W 7 W 7 5 8 18 4 5 7 8 9 10 11 11 14 15 17 17 20 20 22 22 24 25 28 31 LCS_GDT V 8 V 8 5 8 18 4 5 7 8 9 10 11 11 14 15 17 17 20 20 22 22 24 25 28 31 LCS_GDT G 9 G 9 5 8 18 4 5 7 8 9 10 11 11 14 15 17 17 20 20 22 22 24 25 28 31 LCS_GDT S 10 S 10 5 8 18 4 5 7 8 9 10 11 11 14 15 17 17 18 19 21 22 23 25 27 29 LCS_GDT S 11 S 11 5 8 18 3 4 5 7 9 10 11 11 14 15 17 17 17 18 19 21 22 24 26 29 LCS_GDT Y 12 Y 12 5 8 18 3 5 7 8 9 10 11 11 14 15 17 17 17 18 19 21 22 24 26 29 LCS_GDT V 13 V 13 5 8 18 3 5 7 8 9 10 11 11 14 15 17 17 17 18 19 21 22 24 26 29 LCS_GDT A 14 A 14 5 8 18 3 4 5 7 7 9 11 11 14 15 17 17 17 17 18 21 21 23 24 25 LCS_GDT E 15 E 15 5 8 18 3 4 5 8 9 10 11 11 14 15 17 17 17 17 18 21 21 23 24 25 LCS_GDT T 16 T 16 5 8 18 4 4 5 7 8 10 11 11 14 15 17 17 17 18 19 21 22 23 24 26 LCS_GDT G 17 G 17 5 6 18 4 4 5 5 7 9 10 11 14 15 17 17 17 17 18 21 22 24 26 29 LCS_GDT Q 18 Q 18 5 6 18 4 4 5 5 7 9 10 11 14 15 17 17 17 18 19 21 23 25 27 29 LCS_GDT N 19 N 19 5 6 18 4 4 5 5 7 9 10 11 13 15 17 17 18 19 21 22 24 25 27 29 LCS_GDT W 20 W 20 5 6 18 3 4 5 5 7 9 10 11 14 15 17 17 20 20 22 22 24 25 28 31 LCS_GDT A 21 A 21 3 4 18 3 3 4 5 6 6 9 11 14 15 17 17 20 20 22 22 24 25 28 31 LCS_GDT S 22 S 22 3 4 18 3 3 4 5 5 6 7 9 11 13 15 15 16 18 22 22 23 24 28 31 LCS_GDT L 23 L 23 5 5 17 3 4 5 5 5 5 6 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT A 24 A 24 5 5 12 3 4 5 5 6 6 8 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT A 25 A 25 5 5 12 3 4 5 5 6 6 8 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT N 26 N 26 5 5 13 3 4 5 5 5 6 7 8 10 11 13 15 18 19 22 22 24 25 28 31 LCS_GDT E 27 E 27 5 6 15 0 3 5 5 5 5 8 9 10 11 13 14 16 19 21 22 24 25 28 31 LCS_GDT L 28 L 28 4 7 15 0 3 5 6 6 7 8 9 11 12 13 14 15 18 20 22 23 25 28 31 LCS_GDT R 29 R 29 4 7 15 3 4 5 6 6 7 8 9 12 12 13 14 16 18 19 21 23 24 28 31 LCS_GDT V 30 V 30 4 7 15 3 4 5 6 6 8 9 9 11 12 14 14 16 18 19 21 23 24 26 31 LCS_GDT T 31 T 31 4 8 15 3 4 5 6 8 8 9 9 10 11 14 14 16 18 19 21 23 24 26 31 LCS_GDT E 32 E 32 4 8 15 3 4 5 6 8 8 9 9 10 11 12 14 15 18 19 20 23 24 26 31 LCS_GDT R 33 R 33 4 8 15 1 3 5 6 8 8 9 9 10 11 12 14 15 18 19 20 23 24 28 31 LCS_GDT P 34 P 34 4 8 15 3 3 4 6 8 8 9 9 10 11 13 14 15 19 21 22 24 25 28 31 LCS_GDT F 35 F 35 4 8 15 3 3 4 6 8 8 9 9 10 11 14 15 16 19 21 22 24 25 28 31 LCS_GDT W 36 W 36 4 8 15 3 3 4 6 8 8 9 9 10 12 14 16 20 20 22 22 24 25 28 31 LCS_GDT I 37 I 37 4 8 15 0 3 4 6 8 8 9 9 11 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT S 38 S 38 3 8 15 0 3 4 5 8 8 9 9 12 13 15 15 20 20 22 22 23 24 26 28 LCS_GDT S 39 S 39 3 4 15 0 3 4 4 4 5 7 11 12 13 15 16 20 20 22 22 23 24 28 31 LCS_GDT F 40 F 40 3 4 15 3 3 4 4 4 5 7 11 12 13 15 16 20 20 22 22 23 25 28 31 LCS_GDT I 41 I 41 5 5 15 3 4 5 5 5 5 7 11 12 13 15 15 20 20 22 22 23 24 28 31 LCS_GDT G 42 G 42 5 5 12 3 4 5 5 5 5 7 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT R 43 R 43 5 5 12 3 4 5 5 6 6 7 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT S 44 S 44 5 5 12 3 4 5 5 6 6 7 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_GDT K 45 K 45 5 5 12 3 3 5 5 6 6 8 11 12 13 15 16 20 20 22 22 24 25 28 31 LCS_AVERAGE LCS_A: 20.14 ( 10.12 14.67 35.64 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 8 9 10 11 11 14 15 17 17 20 20 22 22 24 25 28 31 GDT PERCENT_AT 9.09 11.36 15.91 18.18 20.45 22.73 25.00 25.00 31.82 34.09 38.64 38.64 45.45 45.45 50.00 50.00 54.55 56.82 63.64 70.45 GDT RMS_LOCAL 0.28 0.47 1.06 1.34 1.57 1.81 2.18 2.18 3.52 3.58 4.22 4.22 4.85 4.85 5.16 5.16 5.92 6.07 7.14 7.64 GDT RMS_ALL_AT 15.67 13.89 13.79 14.04 14.22 14.03 14.24 14.24 17.63 18.03 17.15 17.15 12.85 12.85 12.75 12.75 11.54 11.53 11.23 11.17 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 22.928 0 0.150 0.183 25.212 0.000 0.000 - LGA V 3 V 3 16.650 0 0.099 0.152 18.816 0.000 0.000 13.234 LGA Q 4 Q 4 13.361 0 0.084 0.501 19.576 0.000 0.000 19.576 LGA G 5 G 5 6.715 0 0.534 0.534 9.023 0.909 0.909 - LGA P 6 P 6 1.747 0 0.454 0.460 5.246 42.727 25.974 5.246 LGA W 7 W 7 1.746 0 0.280 0.455 2.865 45.000 42.338 2.865 LGA V 8 V 8 1.803 0 0.094 0.140 3.757 66.364 47.273 2.703 LGA G 9 G 9 1.176 0 0.062 0.062 1.724 65.909 65.909 - LGA S 10 S 10 2.325 0 0.626 0.849 3.612 34.545 33.939 2.492 LGA S 11 S 11 2.539 0 0.262 0.540 4.081 38.636 29.697 3.117 LGA Y 12 Y 12 1.804 0 0.030 1.278 13.086 63.182 23.333 13.086 LGA V 13 V 13 0.536 0 0.589 1.417 3.556 74.091 61.039 3.556 LGA A 14 A 14 3.898 0 0.087 0.095 5.222 16.818 13.455 - LGA E 15 E 15 1.836 0 0.609 1.209 4.358 49.545 28.687 4.064 LGA T 16 T 16 2.725 0 0.680 0.572 6.524 16.364 11.688 6.524 LGA G 17 G 17 9.987 0 0.120 0.120 13.659 0.000 0.000 - LGA Q 18 Q 18 11.570 0 0.038 1.151 16.283 0.000 0.000 16.194 LGA N 19 N 19 14.238 0 0.645 1.020 19.523 0.000 0.000 17.887 LGA W 20 W 20 13.799 0 0.035 1.126 22.338 0.000 0.000 22.338 LGA A 21 A 21 12.301 0 0.634 0.598 13.670 0.000 0.000 - LGA S 22 S 22 16.257 0 0.551 0.810 18.955 0.000 0.000 18.955 LGA L 23 L 23 21.127 0 0.616 0.930 26.828 0.000 0.000 26.424 LGA A 24 A 24 18.420 0 0.234 0.248 19.469 0.000 0.000 - LGA A 25 A 25 16.189 0 0.125 0.120 16.990 0.000 0.000 - LGA N 26 N 26 16.139 0 0.611 0.653 18.398 0.000 0.000 17.456 LGA E 27 E 27 14.239 0 0.628 1.184 17.995 0.000 0.000 17.995 LGA L 28 L 28 8.929 0 0.629 0.535 10.308 0.000 0.000 7.976 LGA R 29 R 29 6.592 0 0.531 1.533 9.433 0.000 0.000 9.433 LGA V 30 V 30 6.385 0 0.090 0.075 9.314 0.455 0.260 9.314 LGA T 31 T 31 8.990 0 0.099 0.120 12.895 0.000 0.000 9.816 LGA E 32 E 32 15.126 0 0.168 0.910 16.622 0.000 0.000 16.622 LGA R 33 R 33 18.286 0 0.664 1.448 20.575 0.000 0.000 16.148 LGA P 34 P 34 16.324 0 0.217 0.318 19.033 0.000 0.000 18.709 LGA F 35 F 35 11.254 0 0.091 1.360 12.651 0.000 0.000 7.741 LGA W 36 W 36 9.431 0 0.140 0.840 19.731 0.000 0.000 19.731 LGA I 37 I 37 5.945 0 0.630 0.682 9.429 0.000 0.000 5.473 LGA S 38 S 38 9.849 0 0.676 0.834 10.368 0.000 0.000 10.095 LGA S 39 S 39 10.552 0 0.666 0.569 12.174 0.000 0.000 7.749 LGA F 40 F 40 14.781 0 0.600 1.456 19.311 0.000 0.000 14.938 LGA I 41 I 41 18.760 0 0.106 0.301 20.985 0.000 0.000 17.901 LGA G 42 G 42 23.024 0 0.253 0.253 26.702 0.000 0.000 - LGA R 43 R 43 26.343 0 0.085 1.145 29.938 0.000 0.000 29.938 LGA S 44 S 44 30.353 0 0.121 0.619 33.549 0.000 0.000 33.549 LGA K 45 K 45 32.221 0 0.571 0.840 40.572 0.000 0.000 40.572 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.903 9.689 10.627 11.694 8.739 3.636 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.18 26.136 24.481 0.483 LGA_LOCAL RMSD: 2.177 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.238 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.903 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.452689 * X + -0.701088 * Y + 0.550952 * Z + -26.094702 Y_new = -0.769327 * X + 0.005278 * Y + 0.638833 * Z + 25.949066 Z_new = -0.450787 * X + -0.713055 * Y + -0.536977 * Z + -30.263351 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.038934 0.467646 -2.216256 [DEG: -59.5265 26.7942 -126.9821 ] ZXZ: 2.429924 2.137646 -2.577839 [DEG: 139.2244 122.4781 -147.6993 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS288_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS288_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.18 24.481 9.90 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS288_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 REFINED PARENT N/A ATOM 525 N ALA 2 -0.205 42.538 -7.358 1.00 4.62 ATOM 526 CA ALA 2 0.666 41.648 -6.570 1.00 4.62 ATOM 527 C ALA 2 2.012 42.313 -6.184 1.00 4.62 ATOM 528 O ALA 2 2.766 42.769 -7.045 1.00 4.62 ATOM 529 CB ALA 2 0.896 40.347 -7.358 1.00 4.82 ATOM 530 N VAL 3 2.322 42.331 -4.881 1.00 4.25 ATOM 531 CA VAL 3 3.609 42.728 -4.277 1.00 4.25 ATOM 532 C VAL 3 4.540 41.516 -4.290 1.00 4.25 ATOM 533 O VAL 3 4.302 40.562 -3.548 1.00 4.25 ATOM 534 CB VAL 3 3.423 43.195 -2.811 1.00 4.26 ATOM 535 CG1 VAL 3 4.741 43.670 -2.188 1.00 4.26 ATOM 536 CG2 VAL 3 2.427 44.342 -2.659 1.00 4.26 ATOM 537 N GLN 4 5.587 41.530 -5.118 1.00 4.21 ATOM 538 CA GLN 4 6.534 40.411 -5.208 1.00 4.21 ATOM 539 C GLN 4 7.813 40.657 -4.392 1.00 4.21 ATOM 540 O GLN 4 8.401 41.741 -4.456 1.00 4.21 ATOM 541 CB GLN 4 6.826 40.056 -6.672 1.00 5.88 ATOM 542 CG GLN 4 5.543 39.676 -7.435 1.00 5.88 ATOM 543 CD GLN 4 5.844 38.817 -8.662 1.00 5.88 ATOM 544 OE1 GLN 4 5.816 39.271 -9.799 1.00 5.88 ATOM 545 NE2 GLN 4 6.161 37.552 -8.479 1.00 5.88 ATOM 546 N GLY 5 8.242 39.644 -3.633 1.00 4.09 ATOM 547 CA GLY 5 9.429 39.667 -2.765 1.00 4.09 ATOM 548 C GLY 5 9.123 39.287 -1.304 1.00 4.09 ATOM 549 O GLY 5 9.687 38.303 -0.817 1.00 4.09 ATOM 550 N PRO 6 8.233 40.015 -0.594 1.00 3.15 ATOM 551 CA PRO 6 7.822 39.700 0.779 1.00 3.15 ATOM 552 C PRO 6 6.893 38.471 0.864 1.00 3.15 ATOM 553 O PRO 6 5.673 38.594 1.005 1.00 3.15 ATOM 554 CB PRO 6 7.198 40.995 1.337 1.00 3.27 ATOM 555 CG PRO 6 7.770 42.082 0.433 1.00 3.27 ATOM 556 CD PRO 6 7.794 41.364 -0.913 1.00 3.27 ATOM 557 N TRP 7 7.476 37.269 0.791 1.00 2.92 ATOM 558 CA TRP 7 6.781 35.992 0.998 1.00 2.92 ATOM 559 C TRP 7 6.008 35.986 2.330 1.00 2.92 ATOM 560 O TRP 7 6.607 36.130 3.401 1.00 2.92 ATOM 561 CB TRP 7 7.797 34.836 1.019 1.00 3.66 ATOM 562 CG TRP 7 8.829 34.772 -0.069 1.00 3.66 ATOM 563 CD1 TRP 7 10.163 34.878 0.130 1.00 3.66 ATOM 564 CD2 TRP 7 8.659 34.527 -1.501 1.00 3.66 ATOM 565 NE1 TRP 7 10.831 34.698 -1.065 1.00 3.66 ATOM 566 CE2 TRP 7 9.955 34.464 -2.103 1.00 3.66 ATOM 567 CE3 TRP 7 7.549 34.339 -2.355 1.00 3.66 ATOM 568 CZ2 TRP 7 10.141 34.207 -3.469 1.00 3.66 ATOM 569 CZ3 TRP 7 7.725 34.100 -3.733 1.00 3.66 ATOM 570 CH2 TRP 7 9.016 34.027 -4.290 1.00 3.66 ATOM 571 N VAL 8 4.685 35.797 2.283 1.00 2.66 ATOM 572 CA VAL 8 3.850 35.768 3.497 1.00 2.66 ATOM 573 C VAL 8 3.923 34.417 4.217 1.00 2.66 ATOM 574 O VAL 8 4.137 34.378 5.427 1.00 2.66 ATOM 575 CB VAL 8 2.392 36.128 3.178 1.00 2.88 ATOM 576 CG1 VAL 8 1.529 36.137 4.440 1.00 2.88 ATOM 577 CG2 VAL 8 2.273 37.517 2.554 1.00 2.88 ATOM 578 N GLY 9 3.753 33.308 3.485 1.00 2.15 ATOM 579 CA GLY 9 3.662 31.964 4.071 1.00 2.15 ATOM 580 C GLY 9 4.976 31.415 4.648 1.00 2.15 ATOM 581 O GLY 9 5.047 31.074 5.832 1.00 2.15 ATOM 582 N SER 10 6.018 31.324 3.810 1.00 2.54 ATOM 583 CA SER 10 7.269 30.611 4.127 1.00 2.54 ATOM 584 C SER 10 7.919 31.063 5.447 1.00 2.54 ATOM 585 O SER 10 8.155 32.254 5.654 1.00 2.54 ATOM 586 CB SER 10 8.266 30.740 2.968 1.00 2.58 ATOM 587 OG SER 10 9.446 29.989 3.221 1.00 2.58 ATOM 588 N SER 11 8.179 30.089 6.333 1.00 2.04 ATOM 589 CA SER 11 8.766 30.206 7.684 1.00 2.04 ATOM 590 C SER 11 8.037 31.113 8.697 1.00 2.04 ATOM 591 O SER 11 8.536 31.313 9.808 1.00 2.04 ATOM 592 CB SER 11 10.286 30.449 7.642 1.00 2.07 ATOM 593 OG SER 11 10.636 31.815 7.464 1.00 2.07 ATOM 594 N TYR 12 6.830 31.591 8.376 1.00 2.45 ATOM 595 CA TYR 12 5.964 32.339 9.299 1.00 2.45 ATOM 596 C TYR 12 4.737 31.519 9.747 1.00 2.45 ATOM 597 O TYR 12 4.231 31.719 10.852 1.00 2.45 ATOM 598 CB TYR 12 5.621 33.699 8.674 1.00 5.38 ATOM 599 CG TYR 12 6.844 34.563 8.378 1.00 5.38 ATOM 600 CD1 TYR 12 7.160 34.935 7.055 1.00 5.38 ATOM 601 CD2 TYR 12 7.682 34.982 9.434 1.00 5.38 ATOM 602 CE1 TYR 12 8.289 35.733 6.785 1.00 5.38 ATOM 603 CE2 TYR 12 8.817 35.775 9.169 1.00 5.38 ATOM 604 CZ TYR 12 9.120 36.163 7.845 1.00 5.38 ATOM 605 OH TYR 12 10.213 36.941 7.602 1.00 5.38 ATOM 606 N VAL 13 4.295 30.553 8.931 1.00 3.25 ATOM 607 CA VAL 13 3.329 29.502 9.312 1.00 3.25 ATOM 608 C VAL 13 3.971 28.515 10.306 1.00 3.25 ATOM 609 O VAL 13 5.188 28.321 10.282 1.00 3.25 ATOM 610 CB VAL 13 2.799 28.752 8.070 1.00 3.98 ATOM 611 CG1 VAL 13 2.005 29.700 7.164 1.00 3.98 ATOM 612 CG2 VAL 13 3.907 28.063 7.258 1.00 3.98 ATOM 613 N ALA 14 3.166 27.898 11.182 1.00 3.06 ATOM 614 CA ALA 14 3.562 27.049 12.327 1.00 3.06 ATOM 615 C ALA 14 4.442 27.725 13.414 1.00 3.06 ATOM 616 O ALA 14 4.356 27.353 14.587 1.00 3.06 ATOM 617 CB ALA 14 4.157 25.724 11.822 1.00 2.95 ATOM 618 N GLU 15 5.263 28.720 13.063 1.00 2.22 ATOM 619 CA GLU 15 5.980 29.598 14.001 1.00 2.22 ATOM 620 C GLU 15 5.030 30.572 14.732 1.00 2.22 ATOM 621 O GLU 15 3.885 30.769 14.318 1.00 2.22 ATOM 622 CB GLU 15 7.080 30.389 13.272 1.00 3.20 ATOM 623 CG GLU 15 8.167 29.486 12.658 1.00 3.20 ATOM 624 CD GLU 15 9.599 30.074 12.706 1.00 3.20 ATOM 625 OE1 GLU 15 9.804 31.275 13.011 1.00 3.20 ATOM 626 OE2 GLU 15 10.561 29.303 12.461 1.00 3.20 ATOM 627 N THR 16 5.504 31.191 15.821 1.00 2.95 ATOM 628 CA THR 16 4.691 32.027 16.733 1.00 2.95 ATOM 629 C THR 16 5.381 33.334 17.162 1.00 2.95 ATOM 630 O THR 16 6.603 33.474 17.062 1.00 2.95 ATOM 631 CB THR 16 4.220 31.211 17.958 1.00 4.25 ATOM 632 OG1 THR 16 5.306 30.684 18.700 1.00 4.25 ATOM 633 CG2 THR 16 3.337 30.031 17.544 1.00 4.25 ATOM 634 N GLY 17 4.592 34.302 17.650 1.00 2.87 ATOM 635 CA GLY 17 5.070 35.563 18.243 1.00 2.87 ATOM 636 C GLY 17 5.526 36.654 17.258 1.00 2.87 ATOM 637 O GLY 17 6.365 37.480 17.629 1.00 2.87 ATOM 638 N GLN 18 5.023 36.662 16.017 1.00 2.33 ATOM 639 CA GLN 18 5.504 37.528 14.922 1.00 2.33 ATOM 640 C GLN 18 4.360 38.264 14.193 1.00 2.33 ATOM 641 O GLN 18 3.284 37.707 13.977 1.00 2.33 ATOM 642 CB GLN 18 6.363 36.661 13.973 1.00 1.94 ATOM 643 CG GLN 18 6.961 37.370 12.741 1.00 1.94 ATOM 644 CD GLN 18 8.009 38.444 13.053 1.00 1.94 ATOM 645 OE1 GLN 18 8.622 38.493 14.112 1.00 1.94 ATOM 646 NE2 GLN 18 8.268 39.348 12.131 1.00 1.94 ATOM 647 N ASN 19 4.600 39.513 13.780 1.00 2.19 ATOM 648 CA ASN 19 3.712 40.277 12.888 1.00 2.19 ATOM 649 C ASN 19 4.264 40.314 11.455 1.00 2.19 ATOM 650 O ASN 19 5.477 40.204 11.250 1.00 2.19 ATOM 651 CB ASN 19 3.543 41.715 13.414 1.00 2.39 ATOM 652 CG ASN 19 3.022 41.805 14.840 1.00 2.39 ATOM 653 OD1 ASN 19 2.205 41.016 15.292 1.00 2.39 ATOM 654 ND2 ASN 19 3.480 42.779 15.597 1.00 2.39 ATOM 655 N TRP 20 3.395 40.539 10.465 1.00 2.45 ATOM 656 CA TRP 20 3.825 40.842 9.099 1.00 2.45 ATOM 657 C TRP 20 2.926 41.879 8.421 1.00 2.45 ATOM 658 O TRP 20 1.705 41.805 8.511 1.00 2.45 ATOM 659 CB TRP 20 3.957 39.571 8.247 1.00 3.31 ATOM 660 CG TRP 20 4.846 39.816 7.069 1.00 3.31 ATOM 661 CD1 TRP 20 4.463 40.007 5.786 1.00 3.31 ATOM 662 CD2 TRP 20 6.286 40.047 7.100 1.00 3.31 ATOM 663 NE1 TRP 20 5.566 40.360 5.027 1.00 3.31 ATOM 664 CE2 TRP 20 6.710 40.442 5.797 1.00 3.31 ATOM 665 CE3 TRP 20 7.260 40.018 8.120 1.00 3.31 ATOM 666 CZ2 TRP 20 8.036 40.823 5.532 1.00 3.31 ATOM 667 CZ3 TRP 20 8.594 40.385 7.863 1.00 3.31 ATOM 668 CH2 TRP 20 8.980 40.797 6.575 1.00 3.31 ATOM 669 N ALA 21 3.520 42.828 7.701 1.00 4.01 ATOM 670 CA ALA 21 2.803 43.802 6.879 1.00 4.01 ATOM 671 C ALA 21 3.501 43.977 5.523 1.00 4.01 ATOM 672 O ALA 21 4.727 43.879 5.419 1.00 4.01 ATOM 673 CB ALA 21 2.668 45.126 7.641 1.00 4.38 ATOM 674 N SER 22 2.709 44.238 4.482 1.00 4.81 ATOM 675 CA SER 22 3.188 44.354 3.101 1.00 4.81 ATOM 676 C SER 22 2.355 45.408 2.366 1.00 4.81 ATOM 677 O SER 22 1.370 45.094 1.692 1.00 4.81 ATOM 678 CB SER 22 3.139 42.975 2.446 1.00 4.81 ATOM 679 OG SER 22 3.875 42.967 1.234 1.00 4.81 ATOM 680 N LEU 23 2.755 46.673 2.569 1.00 5.19 ATOM 681 CA LEU 23 2.034 47.908 2.220 1.00 5.19 ATOM 682 C LEU 23 0.760 48.045 3.098 1.00 5.19 ATOM 683 O LEU 23 -0.110 47.175 3.122 1.00 5.19 ATOM 684 CB LEU 23 1.895 47.998 0.680 1.00 5.22 ATOM 685 CG LEU 23 1.787 49.388 0.029 1.00 5.22 ATOM 686 CD1 LEU 23 0.449 50.065 0.309 1.00 5.22 ATOM 687 CD2 LEU 23 2.926 50.333 0.428 1.00 5.22 ATOM 688 N ALA 24 0.663 49.144 3.859 1.00 6.23 ATOM 689 CA ALA 24 -0.253 49.315 5.005 1.00 6.23 ATOM 690 C ALA 24 -1.788 49.202 4.818 1.00 6.23 ATOM 691 O ALA 24 -2.524 49.366 5.796 1.00 6.23 ATOM 692 CB ALA 24 0.160 50.571 5.785 1.00 6.78 ATOM 693 N ALA 25 -2.303 48.892 3.622 1.00 4.59 ATOM 694 CA ALA 25 -3.699 48.452 3.473 1.00 4.59 ATOM 695 C ALA 25 -3.912 47.070 4.150 1.00 4.59 ATOM 696 O ALA 25 -5.042 46.722 4.505 1.00 4.59 ATOM 697 CB ALA 25 -4.054 48.398 1.981 1.00 4.21 ATOM 698 N ASN 26 -2.822 46.308 4.348 1.00 2.42 ATOM 699 CA ASN 26 -2.791 44.913 4.790 1.00 2.42 ATOM 700 C ASN 26 -1.816 44.690 5.976 1.00 2.42 ATOM 701 O ASN 26 -0.665 45.135 5.936 1.00 2.42 ATOM 702 CB ASN 26 -2.381 44.069 3.564 1.00 1.69 ATOM 703 CG ASN 26 -3.499 43.784 2.570 1.00 1.69 ATOM 704 OD1 ASN 26 -4.441 44.538 2.383 1.00 1.69 ATOM 705 ND2 ASN 26 -3.444 42.658 1.894 1.00 1.69 ATOM 706 N GLU 27 -2.249 43.950 7.009 1.00 2.67 ATOM 707 CA GLU 27 -1.434 43.540 8.170 1.00 2.67 ATOM 708 C GLU 27 -1.905 42.189 8.768 1.00 2.67 ATOM 709 O GLU 27 -3.078 42.006 9.103 1.00 2.67 ATOM 710 CB GLU 27 -1.435 44.667 9.223 1.00 3.32 ATOM 711 CG GLU 27 -0.622 44.338 10.488 1.00 3.32 ATOM 712 CD GLU 27 -0.576 45.493 11.515 1.00 3.32 ATOM 713 OE1 GLU 27 -1.104 46.605 11.259 1.00 3.32 ATOM 714 OE2 GLU 27 0.001 45.293 12.612 1.00 3.32 ATOM 715 N LEU 28 -0.979 41.236 8.905 1.00 2.04 ATOM 716 CA LEU 28 -1.144 39.925 9.547 1.00 2.04 ATOM 717 C LEU 28 -0.485 39.886 10.934 1.00 2.04 ATOM 718 O LEU 28 0.500 40.579 11.210 1.00 2.04 ATOM 719 CB LEU 28 -0.555 38.818 8.653 1.00 2.19 ATOM 720 CG LEU 28 -1.446 38.461 7.450 1.00 2.19 ATOM 721 CD1 LEU 28 -0.571 37.973 6.304 1.00 2.19 ATOM 722 CD2 LEU 28 -2.506 37.404 7.750 1.00 2.19 ATOM 723 N ARG 29 -1.016 39.013 11.792 1.00 2.12 ATOM 724 CA ARG 29 -0.614 38.809 13.189 1.00 2.12 ATOM 725 C ARG 29 -0.546 37.312 13.499 1.00 2.12 ATOM 726 O ARG 29 -1.374 36.547 13.015 1.00 2.12 ATOM 727 CB ARG 29 -1.632 39.541 14.084 1.00 3.46 ATOM 728 CG ARG 29 -1.164 39.634 15.541 1.00 3.46 ATOM 729 CD ARG 29 -2.250 40.225 16.440 1.00 3.46 ATOM 730 NE ARG 29 -1.699 40.547 17.770 1.00 3.46 ATOM 731 CZ ARG 29 -2.352 41.076 18.789 1.00 3.46 ATOM 732 NH1 ARG 29 -1.709 41.436 19.862 1.00 3.46 ATOM 733 NH2 ARG 29 -3.642 41.264 18.764 1.00 3.46 ATOM 734 N VAL 30 0.419 36.875 14.307 1.00 1.88 ATOM 735 CA VAL 30 0.603 35.452 14.643 1.00 1.88 ATOM 736 C VAL 30 0.961 35.289 16.120 1.00 1.88 ATOM 737 O VAL 30 2.092 35.538 16.539 1.00 1.88 ATOM 738 CB VAL 30 1.644 34.799 13.713 1.00 1.93 ATOM 739 CG1 VAL 30 1.866 33.334 14.079 1.00 1.93 ATOM 740 CG2 VAL 30 1.217 34.849 12.244 1.00 1.93 ATOM 741 N THR 31 -0.027 34.875 16.912 1.00 2.31 ATOM 742 CA THR 31 0.033 34.754 18.383 1.00 2.31 ATOM 743 C THR 31 0.173 33.302 18.865 1.00 2.31 ATOM 744 O THR 31 0.814 33.046 19.885 1.00 2.31 ATOM 745 CB THR 31 -1.253 35.349 18.975 1.00 2.63 ATOM 746 OG1 THR 31 -2.352 34.710 18.363 1.00 2.63 ATOM 747 CG2 THR 31 -1.366 36.853 18.711 1.00 2.63 ATOM 748 N GLU 32 -0.390 32.348 18.118 1.00 2.49 ATOM 749 CA GLU 32 -0.438 30.904 18.404 1.00 2.49 ATOM 750 C GLU 32 -0.190 30.088 17.112 1.00 2.49 ATOM 751 O GLU 32 0.096 30.661 16.058 1.00 2.49 ATOM 752 CB GLU 32 -1.792 30.545 19.060 1.00 3.05 ATOM 753 CG GLU 32 -2.043 31.274 20.393 1.00 3.05 ATOM 754 CD GLU 32 -3.281 30.765 21.166 1.00 3.05 ATOM 755 OE1 GLU 32 -4.080 29.949 20.641 1.00 3.05 ATOM 756 OE2 GLU 32 -3.468 31.188 22.335 1.00 3.05 ATOM 757 N ARG 33 -0.284 28.748 17.192 1.00 2.29 ATOM 758 CA ARG 33 0.042 27.762 16.134 1.00 2.29 ATOM 759 C ARG 33 -0.393 28.141 14.686 1.00 2.29 ATOM 760 O ARG 33 0.400 27.872 13.777 1.00 2.29 ATOM 761 CB ARG 33 -0.511 26.393 16.606 1.00 2.37 ATOM 762 CG ARG 33 -0.092 25.160 15.787 1.00 2.37 ATOM 763 CD ARG 33 -0.727 23.878 16.360 1.00 2.37 ATOM 764 NE ARG 33 -2.195 23.824 16.165 1.00 2.37 ATOM 765 CZ ARG 33 -2.859 23.223 15.190 1.00 2.37 ATOM 766 NH1 ARG 33 -4.162 23.188 15.201 1.00 2.37 ATOM 767 NH2 ARG 33 -2.256 22.643 14.191 1.00 2.37 ATOM 768 N PRO 34 -1.584 28.736 14.433 1.00 2.71 ATOM 769 CA PRO 34 -2.073 29.102 13.089 1.00 2.71 ATOM 770 C PRO 34 -1.628 30.519 12.622 1.00 2.71 ATOM 771 O PRO 34 -0.449 30.863 12.728 1.00 2.71 ATOM 772 CB PRO 34 -3.600 28.874 13.148 1.00 3.02 ATOM 773 CG PRO 34 -3.824 28.120 14.458 1.00 3.02 ATOM 774 CD PRO 34 -2.738 28.744 15.315 1.00 3.02 ATOM 775 N PHE 35 -2.537 31.332 12.054 1.00 2.02 ATOM 776 CA PHE 35 -2.264 32.621 11.386 1.00 2.02 ATOM 777 C PHE 35 -3.511 33.548 11.460 1.00 2.02 ATOM 778 O PHE 35 -4.610 33.070 11.165 1.00 2.02 ATOM 779 CB PHE 35 -1.878 32.289 9.924 1.00 2.71 ATOM 780 CG PHE 35 -0.772 33.101 9.279 1.00 2.71 ATOM 781 CD1 PHE 35 0.565 32.925 9.689 1.00 2.71 ATOM 782 CD2 PHE 35 -1.050 33.908 8.162 1.00 2.71 ATOM 783 CE1 PHE 35 1.608 33.588 9.015 1.00 2.71 ATOM 784 CE2 PHE 35 -0.005 34.537 7.467 1.00 2.71 ATOM 785 CZ PHE 35 1.324 34.397 7.903 1.00 2.71 ATOM 786 N TRP 36 -3.377 34.825 11.868 1.00 2.07 ATOM 787 CA TRP 36 -4.475 35.809 12.089 1.00 2.07 ATOM 788 C TRP 36 -4.260 37.147 11.324 1.00 2.07 ATOM 789 O TRP 36 -3.179 37.392 10.793 1.00 2.07 ATOM 790 CB TRP 36 -4.621 36.151 13.590 1.00 3.92 ATOM 791 CG TRP 36 -4.875 35.103 14.636 1.00 3.92 ATOM 792 CD1 TRP 36 -5.165 33.792 14.467 1.00 3.92 ATOM 793 CD2 TRP 36 -4.960 35.338 16.077 1.00 3.92 ATOM 794 NE1 TRP 36 -5.370 33.197 15.700 1.00 3.92 ATOM 795 CE2 TRP 36 -5.324 34.120 16.722 1.00 3.92 ATOM 796 CE3 TRP 36 -4.804 36.478 16.896 1.00 3.92 ATOM 797 CZ2 TRP 36 -5.563 34.043 18.102 1.00 3.92 ATOM 798 CZ3 TRP 36 -5.041 36.415 18.284 1.00 3.92 ATOM 799 CH2 TRP 36 -5.431 35.204 18.886 1.00 3.92 ATOM 800 N ILE 37 -5.256 38.055 11.298 1.00 2.34 ATOM 801 CA ILE 37 -5.277 39.285 10.459 1.00 2.34 ATOM 802 C ILE 37 -5.918 40.528 11.137 1.00 2.34 ATOM 803 O ILE 37 -6.614 40.410 12.148 1.00 2.34 ATOM 804 CB ILE 37 -6.012 38.946 9.133 1.00 2.45 ATOM 805 CG1 ILE 37 -5.567 39.864 7.967 1.00 2.45 ATOM 806 CG2 ILE 37 -7.538 38.961 9.353 1.00 2.45 ATOM 807 CD1 ILE 37 -6.210 39.554 6.612 1.00 2.45 ATOM 808 N SER 38 -5.718 41.716 10.545 1.00 3.08 ATOM 809 CA SER 38 -6.429 42.982 10.817 1.00 3.08 ATOM 810 C SER 38 -6.563 43.833 9.532 1.00 3.08 ATOM 811 O SER 38 -5.643 43.837 8.710 1.00 3.08 ATOM 812 CB SER 38 -5.729 43.799 11.909 1.00 3.52 ATOM 813 OG SER 38 -6.478 44.975 12.186 1.00 3.52 ATOM 814 N SER 39 -7.697 44.545 9.386 1.00 3.71 ATOM 815 CA SER 39 -8.114 45.421 8.259 1.00 3.71 ATOM 816 C SER 39 -8.120 44.782 6.850 1.00 3.71 ATOM 817 O SER 39 -7.593 43.686 6.632 1.00 3.71 ATOM 818 CB SER 39 -7.402 46.785 8.296 1.00 4.13 ATOM 819 OG SER 39 -6.054 46.722 7.861 1.00 4.13 ATOM 820 N PHE 40 -8.811 45.423 5.889 1.00 3.68 ATOM 821 CA PHE 40 -9.111 44.805 4.586 1.00 3.68 ATOM 822 C PHE 40 -9.517 45.781 3.447 1.00 3.68 ATOM 823 O PHE 40 -10.553 46.441 3.516 1.00 3.68 ATOM 824 CB PHE 40 -10.212 43.736 4.819 1.00 4.30 ATOM 825 CG PHE 40 -11.307 44.092 5.821 1.00 4.30 ATOM 826 CD1 PHE 40 -12.400 44.897 5.442 1.00 4.30 ATOM 827 CD2 PHE 40 -11.231 43.615 7.147 1.00 4.30 ATOM 828 CE1 PHE 40 -13.372 45.270 6.387 1.00 4.30 ATOM 829 CE2 PHE 40 -12.213 43.973 8.089 1.00 4.30 ATOM 830 CZ PHE 40 -13.275 44.814 7.713 1.00 4.30 ATOM 831 N ILE 41 -8.721 45.825 2.365 1.00 4.44 ATOM 832 CA ILE 41 -9.030 46.423 1.037 1.00 4.44 ATOM 833 C ILE 41 -8.209 45.648 -0.023 1.00 4.44 ATOM 834 O ILE 41 -7.095 45.213 0.269 1.00 4.44 ATOM 835 CB ILE 41 -8.769 47.959 0.899 1.00 5.45 ATOM 836 CG1 ILE 41 -9.172 48.827 2.115 1.00 5.45 ATOM 837 CG2 ILE 41 -9.517 48.485 -0.351 1.00 5.45 ATOM 838 CD1 ILE 41 -8.873 50.328 1.953 1.00 5.45 ATOM 839 N GLY 42 -8.727 45.467 -1.248 1.00 4.11 ATOM 840 CA GLY 42 -8.050 44.725 -2.334 1.00 4.11 ATOM 841 C GLY 42 -8.191 45.345 -3.734 1.00 4.11 ATOM 842 O GLY 42 -8.472 44.634 -4.699 1.00 4.11 ATOM 843 N ARG 43 -8.049 46.672 -3.840 1.00 4.08 ATOM 844 CA ARG 43 -8.079 47.436 -5.107 1.00 4.08 ATOM 845 C ARG 43 -6.673 47.783 -5.625 1.00 4.08 ATOM 846 O ARG 43 -5.665 47.475 -4.988 1.00 4.08 ATOM 847 CB ARG 43 -8.913 48.723 -4.909 1.00 5.15 ATOM 848 CG ARG 43 -10.396 48.410 -4.680 1.00 5.15 ATOM 849 CD ARG 43 -11.251 49.681 -4.719 1.00 5.15 ATOM 850 NE ARG 43 -12.673 49.341 -4.520 1.00 5.15 ATOM 851 CZ ARG 43 -13.652 50.163 -4.189 1.00 5.15 ATOM 852 NH1 ARG 43 -14.837 49.688 -3.936 1.00 5.15 ATOM 853 NH2 ARG 43 -13.485 51.454 -4.099 1.00 5.15 ATOM 854 N SER 44 -6.635 48.428 -6.792 1.00 4.88 ATOM 855 CA SER 44 -5.463 49.120 -7.355 1.00 4.88 ATOM 856 C SER 44 -5.083 50.338 -6.483 1.00 4.88 ATOM 857 O SER 44 -5.761 50.634 -5.492 1.00 4.88 ATOM 858 CB SER 44 -5.808 49.565 -8.786 1.00 4.40 ATOM 859 OG SER 44 -6.949 50.416 -8.778 1.00 4.40 ATOM 860 N LYS 45 -4.003 51.057 -6.847 1.00 5.39 ATOM 861 CA LYS 45 -3.362 52.168 -6.092 1.00 5.39 ATOM 862 C LYS 45 -2.687 51.676 -4.804 1.00 5.39 ATOM 863 O LYS 45 -1.493 51.902 -4.602 1.00 5.39 ATOM 864 CB LYS 45 -4.328 53.362 -5.906 1.00 5.87 ATOM 865 CG LYS 45 -4.820 53.878 -7.269 1.00 5.87 ATOM 866 CD LYS 45 -5.824 55.034 -7.177 1.00 5.87 ATOM 867 CE LYS 45 -6.169 55.467 -8.610 1.00 5.87 ATOM 868 NZ LYS 45 -7.111 56.617 -8.648 1.00 5.87 TER END