####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS329_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 25 - 45 4.58 14.46 LCS_AVERAGE: 39.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 2 - 10 2.00 14.58 LCS_AVERAGE: 14.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 40 - 45 0.49 15.33 LCS_AVERAGE: 9.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT V 3 V 3 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT Q 4 Q 4 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT G 5 G 5 5 9 15 4 4 5 7 7 8 9 10 11 13 14 16 16 18 20 22 24 26 27 29 LCS_GDT P 6 P 6 5 9 15 3 3 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT W 7 W 7 3 9 15 3 3 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT V 8 V 8 3 9 15 3 3 4 5 7 7 8 9 11 13 14 16 16 19 21 23 24 26 27 29 LCS_GDT G 9 G 9 3 9 15 3 4 5 7 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT S 10 S 10 3 9 15 3 3 3 6 7 8 9 10 11 13 14 16 16 18 21 23 24 26 27 29 LCS_GDT S 11 S 11 3 3 15 3 3 3 3 3 5 5 8 9 10 13 16 16 19 21 23 24 26 27 29 LCS_GDT Y 12 Y 12 3 3 15 3 3 4 4 5 5 9 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT V 13 V 13 3 3 15 1 3 4 4 5 5 8 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT A 14 A 14 4 7 15 0 4 4 5 6 6 8 12 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT E 15 E 15 4 7 15 3 4 4 5 6 7 8 11 13 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT T 16 T 16 4 7 15 3 4 4 5 6 6 7 7 8 8 11 16 17 18 21 23 24 26 27 29 LCS_GDT G 17 G 17 4 7 13 3 4 4 5 6 7 8 12 12 13 15 16 17 19 21 23 24 26 27 29 LCS_GDT Q 18 Q 18 4 7 13 3 4 4 5 6 6 7 8 9 10 12 13 15 17 19 20 22 25 26 29 LCS_GDT N 19 N 19 4 7 13 3 4 4 5 6 6 8 8 9 10 12 12 14 15 17 20 22 25 26 27 LCS_GDT W 20 W 20 4 7 13 3 4 4 4 6 6 8 8 9 10 12 12 14 15 17 20 22 25 26 27 LCS_GDT A 21 A 21 4 5 13 3 3 4 4 5 6 8 8 9 10 12 12 14 15 16 19 21 25 26 27 LCS_GDT S 22 S 22 4 5 13 3 3 4 4 5 6 8 8 9 10 12 12 14 15 16 19 21 23 26 27 LCS_GDT L 23 L 23 4 5 13 3 3 4 4 5 5 8 9 10 11 11 12 14 15 17 19 22 25 26 27 LCS_GDT A 24 A 24 4 5 13 3 3 4 4 5 5 8 9 10 11 11 12 13 13 13 15 18 19 23 23 LCS_GDT A 25 A 25 4 5 21 3 3 4 4 5 5 8 9 10 11 11 12 13 15 16 19 21 23 26 27 LCS_GDT N 26 N 26 4 5 21 3 3 4 4 5 7 8 9 12 16 17 19 20 20 20 20 22 25 26 29 LCS_GDT E 27 E 27 3 6 21 3 3 4 4 6 9 13 15 18 19 19 19 20 20 20 22 24 26 27 29 LCS_GDT L 28 L 28 5 6 21 3 3 5 5 6 9 13 15 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT R 29 R 29 5 6 21 3 4 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT V 30 V 30 5 6 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT T 31 T 31 5 6 21 3 4 5 7 9 11 13 16 18 19 19 19 20 20 21 22 24 26 27 29 LCS_GDT E 32 E 32 5 6 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 22 24 25 27 29 LCS_GDT R 33 R 33 5 6 21 3 4 5 5 9 11 13 16 18 19 19 19 20 20 20 22 24 25 25 27 LCS_GDT P 34 P 34 3 6 21 3 3 3 6 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT F 35 F 35 4 5 21 3 3 4 4 5 8 10 13 16 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT W 36 W 36 4 5 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT I 37 I 37 4 5 21 3 4 5 6 9 10 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_GDT S 38 S 38 4 5 21 1 3 4 4 5 9 13 16 18 19 19 19 20 20 20 20 22 25 26 29 LCS_GDT S 39 S 39 3 7 21 2 3 4 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT F 40 F 40 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT I 41 I 41 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT G 42 G 42 6 7 21 4 6 6 8 8 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT R 43 R 43 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 20 22 25 25 27 LCS_GDT S 44 S 44 6 7 21 4 6 6 8 9 11 13 16 18 19 19 19 20 20 20 22 23 25 26 29 LCS_GDT K 45 K 45 6 7 21 3 6 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 LCS_AVERAGE LCS_A: 21.44 ( 9.76 14.77 39.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 9 11 13 16 18 19 19 19 20 20 21 23 24 26 27 29 GDT PERCENT_AT 9.09 13.64 13.64 18.18 20.45 25.00 29.55 36.36 40.91 43.18 43.18 43.18 45.45 45.45 47.73 52.27 54.55 59.09 61.36 65.91 GDT RMS_LOCAL 0.21 0.49 0.49 1.26 1.67 1.93 2.58 2.94 3.29 3.42 3.42 3.42 3.78 3.78 5.76 6.09 6.10 6.45 6.59 7.08 GDT RMS_ALL_AT 14.72 15.33 15.33 16.04 15.78 15.75 15.17 15.09 14.74 14.72 14.72 14.72 14.56 14.56 12.04 12.22 11.90 12.03 11.98 11.59 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 16.632 0 0.027 0.060 19.144 0.000 0.000 - LGA V 3 V 3 17.309 0 0.065 1.094 18.869 0.000 0.000 14.339 LGA Q 4 Q 4 22.876 0 0.082 1.075 29.489 0.000 0.000 29.489 LGA G 5 G 5 25.275 0 0.597 0.597 28.059 0.000 0.000 - LGA P 6 P 6 28.379 0 0.013 0.425 32.297 0.000 0.000 32.297 LGA W 7 W 7 26.208 0 0.441 0.445 30.840 0.000 0.000 29.963 LGA V 8 V 8 22.043 0 0.664 0.892 23.267 0.000 0.000 19.368 LGA G 9 G 9 19.974 0 0.559 0.559 22.006 0.000 0.000 - LGA S 10 S 10 22.017 0 0.677 0.739 24.958 0.000 0.000 24.958 LGA S 11 S 11 17.596 0 0.625 0.909 19.118 0.000 0.000 16.826 LGA Y 12 Y 12 15.390 0 0.657 1.226 21.714 0.000 0.000 21.714 LGA V 13 V 13 17.239 0 0.594 0.894 21.180 0.000 0.000 21.180 LGA A 14 A 14 17.132 0 0.628 0.604 17.132 0.000 0.000 - LGA E 15 E 15 13.828 0 0.644 1.031 15.869 0.000 0.000 14.907 LGA T 16 T 16 16.051 0 0.345 1.008 19.026 0.000 0.000 18.513 LGA G 17 G 17 18.515 0 0.644 0.644 18.515 0.000 0.000 - LGA Q 18 Q 18 18.709 0 0.067 1.403 22.428 0.000 0.000 22.428 LGA N 19 N 19 20.253 0 0.661 1.162 22.397 0.000 0.000 22.397 LGA W 20 W 20 22.121 0 0.055 1.205 30.227 0.000 0.000 30.225 LGA A 21 A 21 20.720 0 0.643 0.596 21.116 0.000 0.000 - LGA S 22 S 22 21.775 0 0.145 0.193 25.367 0.000 0.000 25.367 LGA L 23 L 23 19.803 0 0.634 1.235 24.804 0.000 0.000 24.804 LGA A 24 A 24 19.290 0 0.626 0.598 21.951 0.000 0.000 - LGA A 25 A 25 15.014 0 0.385 0.391 16.706 0.000 0.000 - LGA N 26 N 26 10.255 0 0.623 0.848 14.324 0.000 0.000 10.924 LGA E 27 E 27 7.264 0 0.678 1.050 9.049 0.000 0.000 9.049 LGA L 28 L 28 5.485 0 0.251 1.047 10.852 5.455 2.727 10.852 LGA R 29 R 29 1.898 0 0.495 1.835 10.465 54.091 21.322 10.465 LGA V 30 V 30 2.597 0 0.063 0.106 7.140 42.727 24.416 6.410 LGA T 31 T 31 2.773 0 0.629 0.614 7.120 33.636 19.221 7.120 LGA E 32 E 32 3.217 0 0.687 1.246 7.382 22.273 10.101 7.382 LGA R 33 R 33 1.342 0 0.045 1.316 14.051 52.273 20.000 14.051 LGA P 34 P 34 2.011 0 0.621 0.609 4.905 30.909 29.610 2.502 LGA F 35 F 35 5.253 0 0.631 1.319 12.865 5.455 1.983 12.865 LGA W 36 W 36 3.889 0 0.099 1.260 11.387 8.636 4.286 11.387 LGA I 37 I 37 3.752 0 0.671 1.200 7.363 8.182 4.773 7.363 LGA S 38 S 38 3.830 0 0.666 0.841 6.131 22.727 15.152 6.101 LGA S 39 S 39 2.988 0 0.610 0.751 6.151 38.636 25.758 6.151 LGA F 40 F 40 2.829 0 0.632 0.624 9.058 27.273 11.736 8.737 LGA I 41 I 41 3.068 0 0.085 0.578 4.150 13.182 18.409 2.152 LGA G 42 G 42 4.169 0 0.239 0.239 4.169 9.545 9.545 - LGA R 43 R 43 3.291 0 0.160 1.244 7.909 20.909 10.909 7.909 LGA S 44 S 44 0.933 0 0.036 0.715 2.860 62.273 56.970 2.860 LGA K 45 K 45 2.177 0 0.155 0.871 12.114 42.273 19.394 12.114 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.746 10.697 11.552 11.374 6.962 2.649 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.94 30.114 26.690 0.526 LGA_LOCAL RMSD: 2.940 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.095 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.746 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.980354 * X + 0.044254 * Y + -0.192215 * Z + -34.657707 Y_new = 0.196169 * X + -0.117150 * Y + 0.973547 * Z + -103.101288 Z_new = 0.020565 * X + -0.992128 * Y + -0.123530 * Z + 79.968300 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.197491 -0.020567 -1.694669 [DEG: 11.3154 -1.1784 -97.0974 ] ZXZ: -2.946662 1.694642 3.120867 [DEG: -168.8313 97.0959 178.8125 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS329_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.94 26.690 10.75 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS329_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 PARENT 2x3h_A ATOM 9 N ALA 2 -0.794 45.980 19.130 1.00 0.00 N ATOM 10 CA ALA 2 -2.130 45.535 18.896 1.00 0.00 C ATOM 11 CB ALA 2 -3.005 45.543 20.160 1.00 0.00 C ATOM 12 C ALA 2 -2.786 46.453 17.918 1.00 0.00 C ATOM 13 O ALA 2 -2.470 47.639 17.840 1.00 0.00 O ATOM 14 N VAL 3 -3.711 45.891 17.119 1.00 0.00 N ATOM 15 CA VAL 3 -4.498 46.667 16.213 1.00 0.00 C ATOM 16 CB VAL 3 -4.375 46.222 14.786 1.00 0.00 C ATOM 17 CG1 VAL 3 -2.941 46.506 14.309 1.00 0.00 C ATOM 18 CG2 VAL 3 -4.749 44.731 14.715 1.00 0.00 C ATOM 19 C VAL 3 -5.912 46.455 16.659 1.00 0.00 C ATOM 20 O VAL 3 -6.337 45.319 16.868 1.00 0.00 O ATOM 21 N GLN 4 -6.683 47.548 16.824 1.00 0.00 N ATOM 22 CA GLN 4 -8.008 47.406 17.352 1.00 0.00 C ATOM 23 CB GLN 4 -8.336 48.363 18.513 1.00 0.00 C ATOM 24 CG GLN 4 -7.523 48.100 19.783 1.00 0.00 C ATOM 25 CD GLN 4 -8.123 48.935 20.909 1.00 0.00 C ATOM 26 OE1 GLN 4 -8.149 48.514 22.064 1.00 0.00 O ATOM 27 NE2 GLN 4 -8.620 50.154 20.567 1.00 0.00 N ATOM 28 C GLN 4 -9.037 47.658 16.296 1.00 0.00 C ATOM 29 O GLN 4 -8.746 48.153 15.209 1.00 0.00 O ATOM 30 N GLY 5 -10.290 47.292 16.633 1.00 0.00 N ATOM 31 CA GLY 5 -11.438 47.438 15.787 1.00 0.00 C ATOM 32 C GLY 5 -11.657 48.888 15.477 1.00 0.00 C ATOM 33 O GLY 5 -12.009 49.237 14.351 1.00 0.00 O ATOM 34 N PRO 6 -11.491 49.747 16.440 1.00 0.00 N ATOM 35 CA PRO 6 -11.675 51.146 16.164 1.00 0.00 C ATOM 36 CD PRO 6 -11.879 49.421 17.806 1.00 0.00 C ATOM 37 CB PRO 6 -11.767 51.834 17.525 1.00 0.00 C ATOM 38 CG PRO 6 -12.357 50.741 18.434 1.00 0.00 C ATOM 39 C PRO 6 -10.607 51.681 15.268 1.00 0.00 C ATOM 40 O PRO 6 -10.788 52.761 14.710 1.00 0.00 O ATOM 41 N TRP 7 -9.484 50.948 15.132 1.00 0.00 N ATOM 42 CA TRP 7 -8.393 51.379 14.312 1.00 0.00 C ATOM 43 CB TRP 7 -7.114 50.547 14.503 1.00 0.00 C ATOM 44 CG TRP 7 -6.365 50.868 15.772 1.00 0.00 C ATOM 45 CD2 TRP 7 -5.109 51.567 15.784 1.00 0.00 C ATOM 46 CD1 TRP 7 -6.657 50.574 17.070 1.00 0.00 C ATOM 47 NE1 TRP 7 -5.666 51.053 17.895 1.00 0.00 N ATOM 48 CE2 TRP 7 -4.706 51.663 17.113 1.00 0.00 C ATOM 49 CE3 TRP 7 -4.358 52.080 14.766 1.00 0.00 C ATOM 50 CZ2 TRP 7 -3.532 52.281 17.450 1.00 0.00 C ATOM 51 CZ3 TRP 7 -3.179 52.704 15.109 1.00 0.00 C ATOM 52 CH2 TRP 7 -2.774 52.802 16.423 1.00 0.00 C ATOM 53 C TRP 7 -8.790 51.287 12.877 1.00 0.00 C ATOM 54 O TRP 7 -9.711 50.559 12.510 1.00 0.00 O ATOM 55 N VAL 8 -8.108 52.090 12.039 1.00 0.00 N ATOM 56 CA VAL 8 -8.350 52.121 10.626 1.00 0.00 C ATOM 57 CB VAL 8 -7.826 53.355 9.955 1.00 0.00 C ATOM 58 CG1 VAL 8 -6.304 53.419 10.167 1.00 0.00 C ATOM 59 CG2 VAL 8 -8.239 53.312 8.472 1.00 0.00 C ATOM 60 C VAL 8 -7.638 50.964 10.015 1.00 0.00 C ATOM 61 O VAL 8 -6.659 50.459 10.563 1.00 0.00 O ATOM 62 N GLY 9 -8.155 50.483 8.867 1.00 0.00 N ATOM 63 CA GLY 9 -7.497 49.411 8.188 1.00 0.00 C ATOM 64 C GLY 9 -6.243 49.978 7.618 1.00 0.00 C ATOM 65 O GLY 9 -6.241 51.065 7.043 1.00 0.00 O ATOM 66 N SER 10 -5.124 49.252 7.751 1.00 0.00 N ATOM 67 CA SER 10 -3.911 49.786 7.219 1.00 0.00 C ATOM 68 CB SER 10 -3.277 50.874 8.107 1.00 0.00 C ATOM 69 OG SER 10 -4.129 52.012 8.179 1.00 0.00 O ATOM 70 C SER 10 -2.948 48.660 7.165 1.00 0.00 C ATOM 71 O SER 10 -3.166 47.611 7.767 1.00 0.00 O ATOM 72 N SER 11 -1.850 48.837 6.416 1.00 0.00 N ATOM 73 CA SER 11 -0.886 47.789 6.386 1.00 0.00 C ATOM 74 CB SER 11 -0.358 47.481 4.973 1.00 0.00 C ATOM 75 OG SER 11 -1.412 47.002 4.150 1.00 0.00 O ATOM 76 C SER 11 0.269 48.277 7.186 1.00 0.00 C ATOM 77 O SER 11 0.797 49.361 6.942 1.00 0.00 O ATOM 78 N TYR 12 0.683 47.494 8.195 1.00 0.00 N ATOM 79 CA TYR 12 1.828 47.916 8.937 1.00 0.00 C ATOM 80 CB TYR 12 1.543 48.307 10.399 1.00 0.00 C ATOM 81 CG TYR 12 0.929 49.669 10.377 1.00 0.00 C ATOM 82 CD1 TYR 12 -0.408 49.855 10.105 1.00 0.00 C ATOM 83 CD2 TYR 12 1.712 50.771 10.638 1.00 0.00 C ATOM 84 CE1 TYR 12 -0.950 51.121 10.090 1.00 0.00 C ATOM 85 CE2 TYR 12 1.178 52.040 10.623 1.00 0.00 C ATOM 86 CZ TYR 12 -0.156 52.214 10.349 1.00 0.00 C ATOM 87 OH TYR 12 -0.708 53.515 10.335 1.00 0.00 O ATOM 88 C TYR 12 2.835 46.818 8.896 1.00 0.00 C ATOM 89 O TYR 12 2.487 45.640 8.944 1.00 0.00 O ATOM 90 N VAL 13 4.127 47.185 8.760 1.00 0.00 N ATOM 91 CA VAL 13 5.138 46.169 8.701 1.00 0.00 C ATOM 92 CB VAL 13 5.909 46.148 7.412 1.00 0.00 C ATOM 93 CG1 VAL 13 6.756 47.430 7.314 1.00 0.00 C ATOM 94 CG2 VAL 13 6.717 44.838 7.354 1.00 0.00 C ATOM 95 C VAL 13 6.119 46.386 9.809 1.00 0.00 C ATOM 96 O VAL 13 6.473 47.518 10.139 1.00 0.00 O ATOM 97 N ALA 14 6.568 45.279 10.433 1.00 0.00 N ATOM 98 CA ALA 14 7.536 45.344 11.485 1.00 0.00 C ATOM 99 CB ALA 14 6.971 44.916 12.848 1.00 0.00 C ATOM 100 C ALA 14 8.636 44.397 11.121 1.00 0.00 C ATOM 101 O ALA 14 8.388 43.286 10.657 1.00 0.00 O ATOM 102 N GLU 15 9.895 44.837 11.309 1.00 0.00 N ATOM 103 CA GLU 15 11.003 43.992 10.984 1.00 0.00 C ATOM 104 CB GLU 15 11.837 44.451 9.781 1.00 0.00 C ATOM 105 CG GLU 15 13.013 43.509 9.499 1.00 0.00 C ATOM 106 CD GLU 15 14.038 44.256 8.660 1.00 0.00 C ATOM 107 OE1 GLU 15 14.877 44.975 9.264 1.00 0.00 O ATOM 108 OE2 GLU 15 13.994 44.120 7.407 1.00 0.00 O ATOM 109 C GLU 15 11.956 44.016 12.126 1.00 0.00 C ATOM 110 O GLU 15 12.096 45.026 12.815 1.00 0.00 O ATOM 111 N THR 16 12.647 42.878 12.329 1.00 0.00 N ATOM 112 CA THR 16 13.642 42.771 13.349 1.00 0.00 C ATOM 113 CB THR 16 14.845 43.622 13.046 1.00 0.00 C ATOM 114 OG1 THR 16 15.357 43.277 11.766 1.00 0.00 O ATOM 115 CG2 THR 16 15.930 43.375 14.110 1.00 0.00 C ATOM 116 C THR 16 13.035 43.207 14.640 1.00 0.00 C ATOM 117 O THR 16 13.589 44.028 15.367 1.00 0.00 O ATOM 118 N GLY 17 11.845 42.668 14.962 1.00 0.00 N ATOM 119 CA GLY 17 11.258 43.038 16.207 1.00 0.00 C ATOM 120 C GLY 17 11.146 41.803 17.033 1.00 0.00 C ATOM 121 O GLY 17 10.833 40.716 16.547 1.00 0.00 O ATOM 122 N GLN 18 11.408 41.942 18.336 1.00 0.00 N ATOM 123 CA GLN 18 11.303 40.818 19.205 1.00 0.00 C ATOM 124 CB GLN 18 12.591 40.595 20.016 1.00 0.00 C ATOM 125 CG GLN 18 12.545 39.423 20.997 1.00 0.00 C ATOM 126 CD GLN 18 13.911 39.338 21.663 1.00 0.00 C ATOM 127 OE1 GLN 18 14.923 39.114 20.999 1.00 0.00 O ATOM 128 NE2 GLN 18 13.950 39.530 23.009 1.00 0.00 N ATOM 129 C GLN 18 10.208 41.171 20.139 1.00 0.00 C ATOM 130 O GLN 18 10.239 42.233 20.759 1.00 0.00 O ATOM 131 N ASN 19 9.191 40.301 20.245 1.00 0.00 N ATOM 132 CA ASN 19 8.125 40.624 21.130 1.00 0.00 C ATOM 133 CB ASN 19 6.736 40.401 20.505 1.00 0.00 C ATOM 134 CG ASN 19 6.448 41.516 19.504 1.00 0.00 C ATOM 135 OD1 ASN 19 6.416 42.693 19.861 1.00 0.00 O ATOM 136 ND2 ASN 19 6.227 41.139 18.217 1.00 0.00 N ATOM 137 C ASN 19 8.270 39.712 22.298 1.00 0.00 C ATOM 138 O ASN 19 8.353 38.496 22.140 1.00 0.00 O ATOM 139 N TRP 20 8.362 40.294 23.507 1.00 0.00 N ATOM 140 CA TRP 20 8.477 39.488 24.682 1.00 0.00 C ATOM 141 CB TRP 20 9.880 39.553 25.311 1.00 0.00 C ATOM 142 CG TRP 20 10.106 38.632 26.486 1.00 0.00 C ATOM 143 CD2 TRP 20 10.787 37.371 26.394 1.00 0.00 C ATOM 144 CD1 TRP 20 9.786 38.802 27.801 1.00 0.00 C ATOM 145 NE1 TRP 20 10.212 37.720 28.533 1.00 0.00 N ATOM 146 CE2 TRP 20 10.833 36.831 27.680 1.00 0.00 C ATOM 147 CE3 TRP 20 11.333 36.716 25.326 1.00 0.00 C ATOM 148 CZ2 TRP 20 11.429 35.626 27.917 1.00 0.00 C ATOM 149 CZ3 TRP 20 11.927 35.499 25.568 1.00 0.00 C ATOM 150 CH2 TRP 20 11.975 34.965 26.838 1.00 0.00 C ATOM 151 C TRP 20 7.539 40.079 25.679 1.00 0.00 C ATOM 152 O TRP 20 7.744 41.208 26.126 1.00 0.00 O ATOM 153 N ALA 21 6.476 39.344 26.049 1.00 0.00 N ATOM 154 CA ALA 21 5.600 39.879 27.050 1.00 0.00 C ATOM 155 CB ALA 21 4.236 40.326 26.499 1.00 0.00 C ATOM 156 C ALA 21 5.361 38.795 28.057 1.00 0.00 C ATOM 157 O ALA 21 5.038 37.663 27.706 1.00 0.00 O ATOM 158 N SER 22 5.639 39.097 29.340 1.00 0.00 N ATOM 159 CA SER 22 5.395 38.199 30.438 1.00 0.00 C ATOM 160 CB SER 22 6.495 38.248 31.511 1.00 0.00 C ATOM 161 OG SER 22 6.534 39.529 32.118 1.00 0.00 O ATOM 162 C SER 22 4.078 38.483 31.107 1.00 0.00 C ATOM 163 O SER 22 3.602 37.669 31.898 1.00 0.00 O ATOM 164 N LEU 23 3.454 39.641 30.811 1.00 0.00 N ATOM 165 CA LEU 23 2.291 40.111 31.520 1.00 0.00 C ATOM 166 CB LEU 23 1.774 41.460 30.994 1.00 0.00 C ATOM 167 CG LEU 23 2.826 42.584 31.021 1.00 0.00 C ATOM 168 CD1 LEU 23 3.300 42.866 32.452 1.00 0.00 C ATOM 169 CD2 LEU 23 3.982 42.307 30.044 1.00 0.00 C ATOM 170 C LEU 23 1.170 39.143 31.351 1.00 0.00 C ATOM 171 O LEU 23 1.107 38.404 30.372 1.00 0.00 O ATOM 172 N ALA 24 0.261 39.111 32.345 1.00 0.00 N ATOM 173 CA ALA 24 -0.860 38.226 32.257 1.00 0.00 C ATOM 174 CB ALA 24 -1.668 38.124 33.561 1.00 0.00 C ATOM 175 C ALA 24 -1.772 38.742 31.190 1.00 0.00 C ATOM 176 O ALA 24 -1.933 39.949 31.018 1.00 0.00 O ATOM 177 N ALA 25 -2.372 37.804 30.431 1.00 0.00 N ATOM 178 CA ALA 25 -3.318 38.071 29.388 1.00 0.00 C ATOM 179 CB ALA 25 -4.650 38.642 29.906 1.00 0.00 C ATOM 180 C ALA 25 -2.755 39.024 28.400 1.00 0.00 C ATOM 181 O ALA 25 -3.491 39.816 27.818 1.00 0.00 O ATOM 182 N ASN 26 -1.439 38.963 28.153 1.00 0.00 N ATOM 183 CA ASN 26 -0.903 39.890 27.207 1.00 0.00 C ATOM 184 CB ASN 26 0.254 40.737 27.759 1.00 0.00 C ATOM 185 CG ASN 26 0.606 41.764 26.691 1.00 0.00 C ATOM 186 OD1 ASN 26 -0.140 41.951 25.731 1.00 0.00 O ATOM 187 ND2 ASN 26 1.773 42.444 26.855 1.00 0.00 N ATOM 188 C ASN 26 -0.349 39.120 26.064 1.00 0.00 C ATOM 189 O ASN 26 0.533 38.280 26.240 1.00 0.00 O ATOM 190 N GLU 27 -0.892 39.378 24.857 1.00 0.00 N ATOM 191 CA GLU 27 -0.365 38.796 23.666 1.00 0.00 C ATOM 192 CB GLU 27 -1.387 38.661 22.523 1.00 0.00 C ATOM 193 CG GLU 27 -2.184 37.357 22.541 1.00 0.00 C ATOM 194 CD GLU 27 -2.846 37.190 23.892 1.00 0.00 C ATOM 195 OE1 GLU 27 -3.806 37.948 24.187 1.00 0.00 O ATOM 196 OE2 GLU 27 -2.400 36.290 24.656 1.00 0.00 O ATOM 197 C GLU 27 0.708 39.696 23.168 1.00 0.00 C ATOM 198 O GLU 27 0.687 40.904 23.419 1.00 0.00 O ATOM 199 N LEU 28 1.718 39.110 22.494 1.00 0.00 N ATOM 200 CA LEU 28 2.692 39.971 21.913 1.00 0.00 C ATOM 201 CB LEU 28 4.027 39.339 21.454 1.00 0.00 C ATOM 202 CG LEU 28 5.084 39.121 22.575 1.00 0.00 C ATOM 203 CD1 LEU 28 5.376 40.424 23.337 1.00 0.00 C ATOM 204 CD2 LEU 28 4.795 37.941 23.504 1.00 0.00 C ATOM 205 C LEU 28 2.042 40.697 20.783 1.00 0.00 C ATOM 206 O LEU 28 2.264 41.894 20.624 1.00 0.00 O ATOM 207 N ARG 29 1.208 40.009 19.968 1.00 0.00 N ATOM 208 CA ARG 29 0.570 40.728 18.899 1.00 0.00 C ATOM 209 CB ARG 29 1.193 40.457 17.516 1.00 0.00 C ATOM 210 CG ARG 29 0.925 41.550 16.474 1.00 0.00 C ATOM 211 CD ARG 29 -0.325 41.332 15.618 1.00 0.00 C ATOM 212 NE ARG 29 -0.319 42.379 14.556 1.00 0.00 N ATOM 213 CZ ARG 29 -0.975 43.561 14.739 1.00 0.00 C ATOM 214 NH1 ARG 29 -1.693 43.768 15.881 1.00 0.00 N ATOM 215 NH2 ARG 29 -0.918 44.530 13.781 1.00 0.00 N ATOM 216 C ARG 29 -0.873 40.329 18.854 1.00 0.00 C ATOM 217 O ARG 29 -1.204 39.146 18.858 1.00 0.00 O ATOM 218 N VAL 30 -1.781 41.324 18.834 1.00 0.00 N ATOM 219 CA VAL 30 -3.169 40.979 18.743 1.00 0.00 C ATOM 220 CB VAL 30 -3.954 41.294 19.988 1.00 0.00 C ATOM 221 CG1 VAL 30 -5.436 40.964 19.740 1.00 0.00 C ATOM 222 CG2 VAL 30 -3.336 40.524 21.168 1.00 0.00 C ATOM 223 C VAL 30 -3.749 41.772 17.609 1.00 0.00 C ATOM 224 O VAL 30 -3.601 42.993 17.559 1.00 0.00 O ATOM 225 N THR 31 -4.420 41.083 16.662 1.00 0.00 N ATOM 226 CA THR 31 -5.012 41.761 15.542 1.00 0.00 C ATOM 227 CB THR 31 -4.591 41.212 14.218 1.00 0.00 C ATOM 228 OG1 THR 31 -5.083 39.891 14.072 1.00 0.00 O ATOM 229 CG2 THR 31 -3.054 41.210 14.167 1.00 0.00 C ATOM 230 C THR 31 -6.499 41.599 15.645 1.00 0.00 C ATOM 231 O THR 31 -7.036 40.494 15.602 1.00 0.00 O ATOM 232 N GLU 32 -7.164 42.729 15.936 1.00 0.00 N ATOM 233 CA GLU 32 -8.573 42.943 16.093 1.00 0.00 C ATOM 234 CB GLU 32 -8.843 43.905 17.254 1.00 0.00 C ATOM 235 CG GLU 32 -8.412 43.246 18.569 1.00 0.00 C ATOM 236 CD GLU 32 -8.166 44.312 19.624 1.00 0.00 C ATOM 237 OE1 GLU 32 -9.091 45.125 19.885 1.00 0.00 O ATOM 238 OE2 GLU 32 -7.038 44.321 20.187 1.00 0.00 O ATOM 239 C GLU 32 -9.343 43.375 14.862 1.00 0.00 C ATOM 240 O GLU 32 -10.572 43.389 14.918 1.00 0.00 O ATOM 241 N ARG 33 -8.700 43.858 13.772 1.00 0.00 N ATOM 242 CA ARG 33 -9.519 44.351 12.679 1.00 0.00 C ATOM 243 CB ARG 33 -9.326 45.838 12.337 1.00 0.00 C ATOM 244 CG ARG 33 -10.095 46.786 13.252 1.00 0.00 C ATOM 245 CD ARG 33 -11.575 46.944 12.890 1.00 0.00 C ATOM 246 NE ARG 33 -11.657 47.730 11.627 1.00 0.00 N ATOM 247 CZ ARG 33 -12.822 48.359 11.300 1.00 0.00 C ATOM 248 NH1 ARG 33 -13.906 48.248 12.120 1.00 0.00 N ATOM 249 NH2 ARG 33 -12.895 49.121 10.169 1.00 0.00 N ATOM 250 C ARG 33 -9.266 43.612 11.405 1.00 0.00 C ATOM 251 O ARG 33 -8.135 43.303 11.031 1.00 0.00 O ATOM 252 N PRO 34 -10.345 43.336 10.720 1.00 0.00 N ATOM 253 CA PRO 34 -10.318 42.630 9.469 1.00 0.00 C ATOM 254 CD PRO 34 -11.671 43.383 11.311 1.00 0.00 C ATOM 255 CB PRO 34 -11.776 42.262 9.168 1.00 0.00 C ATOM 256 CG PRO 34 -12.610 43.141 10.121 1.00 0.00 C ATOM 257 C PRO 34 -9.631 43.387 8.374 1.00 0.00 C ATOM 258 O PRO 34 -9.053 42.766 7.483 1.00 0.00 O ATOM 259 N PHE 35 -9.714 44.727 8.409 1.00 0.00 N ATOM 260 CA PHE 35 -9.148 45.584 7.410 1.00 0.00 C ATOM 261 CB PHE 35 -9.674 47.025 7.510 1.00 0.00 C ATOM 262 CG PHE 35 -11.154 46.909 7.382 1.00 0.00 C ATOM 263 CD1 PHE 35 -11.743 46.780 6.146 1.00 0.00 C ATOM 264 CD2 PHE 35 -11.950 46.894 8.503 1.00 0.00 C ATOM 265 CE1 PHE 35 -13.108 46.662 6.025 1.00 0.00 C ATOM 266 CE2 PHE 35 -13.316 46.777 8.387 1.00 0.00 C ATOM 267 CZ PHE 35 -13.898 46.661 7.148 1.00 0.00 C ATOM 268 C PHE 35 -7.654 45.621 7.529 1.00 0.00 C ATOM 269 O PHE 35 -6.948 45.770 6.533 1.00 0.00 O ATOM 270 N TRP 36 -7.131 45.514 8.763 1.00 0.00 N ATOM 271 CA TRP 36 -5.725 45.716 8.977 1.00 0.00 C ATOM 272 CB TRP 36 -5.438 46.158 10.430 1.00 0.00 C ATOM 273 CG TRP 36 -4.069 46.718 10.759 1.00 0.00 C ATOM 274 CD2 TRP 36 -3.870 47.734 11.757 1.00 0.00 C ATOM 275 CD1 TRP 36 -2.840 46.458 10.235 1.00 0.00 C ATOM 276 NE1 TRP 36 -1.886 47.240 10.841 1.00 0.00 N ATOM 277 CE2 TRP 36 -2.507 48.029 11.780 1.00 0.00 C ATOM 278 CE3 TRP 36 -4.754 48.366 12.582 1.00 0.00 C ATOM 279 CZ2 TRP 36 -2.002 48.971 12.632 1.00 0.00 C ATOM 280 CZ3 TRP 36 -4.241 49.310 13.444 1.00 0.00 C ATOM 281 CH2 TRP 36 -2.893 49.606 13.465 1.00 0.00 C ATOM 282 C TRP 36 -4.955 44.480 8.635 1.00 0.00 C ATOM 283 O TRP 36 -5.487 43.371 8.643 1.00 0.00 O ATOM 284 N ILE 37 -3.680 44.676 8.227 1.00 0.00 N ATOM 285 CA ILE 37 -2.780 43.590 7.985 1.00 0.00 C ATOM 286 CB ILE 37 -2.488 43.305 6.538 1.00 0.00 C ATOM 287 CG1 ILE 37 -1.752 44.483 5.880 1.00 0.00 C ATOM 288 CG2 ILE 37 -3.809 42.924 5.854 1.00 0.00 C ATOM 289 CD1 ILE 37 -1.093 44.106 4.553 1.00 0.00 C ATOM 290 C ILE 37 -1.473 43.953 8.616 1.00 0.00 C ATOM 291 O ILE 37 -1.081 45.120 8.620 1.00 0.00 O ATOM 292 N SER 38 -0.763 42.954 9.176 1.00 0.00 N ATOM 293 CA SER 38 0.496 43.241 9.798 1.00 0.00 C ATOM 294 CB SER 38 0.516 42.921 11.303 1.00 0.00 C ATOM 295 OG SER 38 1.787 43.241 11.845 1.00 0.00 O ATOM 296 C SER 38 1.534 42.383 9.148 1.00 0.00 C ATOM 297 O SER 38 1.353 41.178 8.967 1.00 0.00 O ATOM 298 N SER 39 2.672 43.000 8.782 1.00 0.00 N ATOM 299 CA SER 39 3.703 42.246 8.141 1.00 0.00 C ATOM 300 CB SER 39 4.254 42.942 6.891 1.00 0.00 C ATOM 301 OG SER 39 3.197 43.133 5.963 1.00 0.00 O ATOM 302 C SER 39 4.817 42.136 9.114 1.00 0.00 C ATOM 303 O SER 39 5.448 43.123 9.480 1.00 0.00 O ATOM 304 N PHE 40 5.083 40.902 9.564 1.00 0.00 N ATOM 305 CA PHE 40 6.136 40.691 10.502 1.00 0.00 C ATOM 306 CB PHE 40 5.662 39.995 11.779 1.00 0.00 C ATOM 307 CG PHE 40 5.285 41.010 12.793 1.00 0.00 C ATOM 308 CD1 PHE 40 4.249 41.892 12.600 1.00 0.00 C ATOM 309 CD2 PHE 40 5.985 41.043 13.974 1.00 0.00 C ATOM 310 CE1 PHE 40 3.928 42.813 13.566 1.00 0.00 C ATOM 311 CE2 PHE 40 5.664 41.962 14.941 1.00 0.00 C ATOM 312 CZ PHE 40 4.636 42.850 14.742 1.00 0.00 C ATOM 313 C PHE 40 7.184 39.844 9.881 1.00 0.00 C ATOM 314 O PHE 40 6.932 38.726 9.433 1.00 0.00 O ATOM 315 N ILE 41 8.415 40.378 9.831 1.00 0.00 N ATOM 316 CA ILE 41 9.505 39.611 9.321 1.00 0.00 C ATOM 317 CB ILE 41 10.047 40.105 8.003 1.00 0.00 C ATOM 318 CG1 ILE 41 9.071 39.817 6.842 1.00 0.00 C ATOM 319 CG2 ILE 41 11.431 39.467 7.800 1.00 0.00 C ATOM 320 CD1 ILE 41 7.746 40.575 6.910 1.00 0.00 C ATOM 321 C ILE 41 10.606 39.671 10.334 1.00 0.00 C ATOM 322 O ILE 41 10.881 40.723 10.909 1.00 0.00 O ATOM 323 N GLY 42 11.240 38.510 10.607 1.00 0.00 N ATOM 324 CA GLY 42 12.378 38.454 11.480 1.00 0.00 C ATOM 325 C GLY 42 11.990 38.871 12.865 1.00 0.00 C ATOM 326 O GLY 42 12.738 39.596 13.520 1.00 0.00 O ATOM 327 N ARG 43 10.820 38.412 13.352 1.00 0.00 N ATOM 328 CA ARG 43 10.336 38.802 14.651 1.00 0.00 C ATOM 329 CB ARG 43 9.151 39.780 14.598 1.00 0.00 C ATOM 330 CG ARG 43 9.537 41.204 14.187 1.00 0.00 C ATOM 331 CD ARG 43 8.578 42.234 14.781 1.00 0.00 C ATOM 332 NE ARG 43 9.056 43.610 14.477 1.00 0.00 N ATOM 333 CZ ARG 43 8.624 44.637 15.268 1.00 0.00 C ATOM 334 NH1 ARG 43 7.732 44.390 16.269 1.00 0.00 N ATOM 335 NH2 ARG 43 9.061 45.913 15.049 1.00 0.00 N ATOM 336 C ARG 43 9.874 37.581 15.416 1.00 0.00 C ATOM 337 O ARG 43 10.223 36.467 15.033 1.00 0.00 O ATOM 338 N SER 44 9.119 37.782 16.544 1.00 0.00 N ATOM 339 CA SER 44 8.658 36.705 17.418 1.00 0.00 C ATOM 340 CB SER 44 9.674 36.434 18.537 1.00 0.00 C ATOM 341 OG SER 44 9.783 37.580 19.367 1.00 0.00 O ATOM 342 C SER 44 7.329 37.056 18.136 1.00 0.00 C ATOM 343 O SER 44 7.084 38.246 18.332 1.00 0.00 O ATOM 344 N LYS 45 6.470 36.034 18.555 1.00 0.00 N ATOM 345 CA LYS 45 5.142 36.138 19.258 1.00 0.00 C ATOM 346 CB LYS 45 4.063 36.782 18.378 1.00 0.00 C ATOM 347 CG LYS 45 4.373 38.194 17.894 1.00 0.00 C ATOM 348 CD LYS 45 3.503 38.591 16.702 1.00 0.00 C ATOM 349 CE LYS 45 3.873 39.941 16.101 1.00 0.00 C ATOM 350 NZ LYS 45 3.277 40.073 14.753 1.00 0.00 N ATOM 351 C LYS 45 4.488 34.698 19.590 1.00 0.00 C ATOM 352 O LYS 45 5.244 33.769 19.318 1.00 0.00 O TER END