####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 77 ( 476), selected 77 , name S0953s2TS329_1-D3 # Molecule2: number of CA atoms 77 ( 476), selected 77 , name S0953s2-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 170 - 187 4.92 18.25 LONGEST_CONTINUOUS_SEGMENT: 18 171 - 188 4.71 18.54 LCS_AVERAGE: 18.54 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 172 - 180 1.94 18.76 LONGEST_CONTINUOUS_SEGMENT: 9 173 - 181 1.83 18.69 LCS_AVERAGE: 8.85 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 156 - 160 0.88 18.78 LONGEST_CONTINUOUS_SEGMENT: 5 163 - 167 0.55 24.84 LONGEST_CONTINUOUS_SEGMENT: 5 164 - 168 0.94 24.52 LONGEST_CONTINUOUS_SEGMENT: 5 168 - 172 0.92 20.69 LONGEST_CONTINUOUS_SEGMENT: 5 215 - 219 0.89 20.23 LCS_AVERAGE: 5.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 77 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 152 G 152 3 5 15 3 3 4 5 6 8 8 9 9 13 14 17 19 19 29 29 31 33 35 36 LCS_GDT G 153 G 153 4 5 15 3 4 4 5 6 7 8 12 14 15 16 19 23 25 29 29 33 34 36 37 LCS_GDT G 154 G 154 4 7 15 3 4 4 5 7 8 10 11 11 17 19 22 24 26 29 31 33 34 36 37 LCS_GDT G 155 G 155 4 7 15 3 4 6 7 8 9 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT G 156 G 156 5 7 15 3 4 6 7 8 9 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT G 157 G 157 5 7 15 3 3 5 7 8 9 10 14 16 18 19 22 24 27 29 31 33 33 36 37 LCS_GDT G 158 G 158 5 7 15 3 3 5 7 8 9 10 14 16 18 19 22 24 27 29 31 33 33 35 37 LCS_GDT F 159 F 159 5 7 15 3 3 5 7 8 9 10 14 16 18 19 22 24 27 29 31 33 33 35 37 LCS_GDT R 160 R 160 5 7 15 3 3 5 7 8 9 10 13 16 18 19 22 24 27 29 31 33 33 35 37 LCS_GDT V 161 V 161 3 7 15 3 3 3 5 7 9 10 14 16 18 19 22 24 27 29 31 33 33 35 37 LCS_GDT G 162 G 162 3 7 15 3 3 5 6 7 8 10 10 12 15 17 22 24 27 29 31 33 33 35 37 LCS_GDT H 163 H 163 5 7 15 3 5 5 6 7 8 10 10 12 15 17 22 24 27 29 31 33 33 35 37 LCS_GDT T 164 T 164 5 7 15 4 5 5 6 7 8 10 10 12 15 16 17 22 26 29 31 33 33 35 37 LCS_GDT E 165 E 165 5 7 15 4 5 5 6 7 8 10 10 12 15 16 18 22 26 26 31 33 33 35 37 LCS_GDT A 166 A 166 5 7 15 4 5 5 6 7 8 10 10 12 15 16 20 23 26 29 29 31 33 35 37 LCS_GDT G 167 G 167 5 7 14 4 5 5 6 7 8 10 10 10 13 16 20 23 25 29 29 31 33 35 36 LCS_GDT G 168 G 168 5 7 13 3 4 6 6 7 8 10 12 14 15 18 20 23 25 29 29 31 33 35 36 LCS_GDT G 169 G 169 5 7 13 3 4 6 6 7 8 10 12 14 15 18 20 23 25 29 29 31 33 35 36 LCS_GDT G 170 G 170 5 7 18 3 4 6 6 7 8 10 12 14 15 18 20 23 26 29 31 33 33 35 37 LCS_GDT G 171 G 171 5 7 18 3 4 6 7 8 9 10 12 14 15 18 22 24 27 29 31 33 34 36 37 LCS_GDT R 172 R 172 5 9 18 3 4 5 5 8 10 11 14 16 17 19 22 24 27 29 31 33 34 36 37 LCS_GDT P 173 P 173 4 9 18 3 4 6 8 9 10 12 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT L 174 L 174 4 9 18 3 4 6 8 9 10 12 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT G 175 G 175 4 9 18 3 3 6 8 9 10 12 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT A 176 A 176 4 9 18 3 4 6 8 9 10 12 14 16 17 19 22 24 24 27 29 33 34 36 37 LCS_GDT G 177 G 177 3 9 18 3 3 4 6 8 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT G 178 G 178 3 9 18 3 3 5 7 8 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT V 179 V 179 3 9 18 3 3 5 6 7 10 11 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT S 180 S 180 3 9 18 0 3 5 6 8 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT S 181 S 181 3 9 18 3 4 6 8 9 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT L 182 L 182 3 6 18 3 3 4 5 6 8 11 14 16 17 19 22 24 24 25 29 30 34 36 37 LCS_GDT N 183 N 183 4 6 18 3 4 6 8 9 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT L 184 L 184 4 6 18 3 3 6 8 9 10 12 14 16 17 19 22 24 24 25 27 29 32 35 36 LCS_GDT N 185 N 185 4 6 18 3 4 6 8 9 10 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT G 186 G 186 4 6 18 3 4 4 5 9 9 12 14 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT D 187 D 187 4 5 18 3 4 4 5 6 7 7 9 11 14 16 18 19 22 24 29 33 34 36 37 LCS_GDT N 188 N 188 4 5 18 3 4 4 5 6 7 7 9 10 11 12 13 15 19 21 27 30 31 35 37 LCS_GDT A 189 A 189 3 5 14 3 3 4 5 5 6 7 8 9 11 11 12 15 17 17 20 23 27 31 33 LCS_GDT T 190 T 190 3 5 14 3 3 3 5 6 7 7 8 9 11 11 13 15 17 17 19 23 27 31 33 LCS_GDT L 191 L 191 3 5 14 3 3 4 4 6 7 7 8 9 11 11 13 15 17 17 17 19 22 26 27 LCS_GDT G 192 G 192 3 5 14 3 3 4 5 6 7 7 8 9 9 11 13 15 17 17 17 19 22 24 26 LCS_GDT A 193 A 193 4 5 13 3 4 4 5 5 6 7 8 9 9 11 13 15 17 17 17 19 20 24 26 LCS_GDT P 194 P 194 4 5 13 3 4 4 5 5 6 6 7 9 10 11 13 15 17 17 17 19 20 21 24 LCS_GDT G 195 G 195 4 6 12 3 4 4 5 5 8 8 9 9 10 11 12 13 13 14 16 17 20 21 23 LCS_GDT R 196 R 196 4 7 12 3 4 4 5 5 8 8 9 9 10 11 12 13 13 15 16 17 20 21 24 LCS_GDT G 197 G 197 3 7 12 3 3 4 5 5 8 8 9 9 10 11 12 13 13 15 16 17 22 27 34 LCS_GDT Y 198 Y 198 3 7 12 3 3 4 5 5 8 8 9 9 10 11 12 15 22 24 29 33 34 36 37 LCS_GDT Q 199 Q 199 4 7 12 3 3 4 5 8 9 11 12 14 16 18 18 20 26 29 29 33 34 36 37 LCS_GDT L 200 L 200 4 7 12 3 3 4 5 5 8 8 9 12 14 16 17 23 27 29 31 33 34 36 37 LCS_GDT G 201 G 201 4 7 12 3 3 4 5 5 8 8 9 10 14 17 22 24 27 29 31 33 34 36 37 LCS_GDT N 202 N 202 4 7 12 3 4 4 5 6 8 8 9 9 13 16 22 24 27 29 31 33 34 36 37 LCS_GDT D 203 D 203 3 7 12 0 3 4 5 6 7 8 9 10 14 17 22 24 27 29 31 33 33 35 37 LCS_GDT Y 204 Y 204 4 7 12 3 3 4 6 7 9 10 14 16 18 19 22 24 27 29 31 33 33 35 37 LCS_GDT A 205 A 205 4 7 11 3 4 4 5 6 7 8 9 9 18 19 21 22 24 26 26 33 33 34 37 LCS_GDT G 206 G 206 4 7 11 3 4 5 5 6 7 9 11 11 16 19 21 24 27 29 31 33 33 35 37 LCS_GDT N 207 N 207 4 7 11 3 4 5 5 7 8 9 12 16 18 19 21 22 27 29 31 33 33 36 37 LCS_GDT G 208 G 208 4 5 11 3 4 5 5 7 8 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT G 209 G 209 4 5 11 3 4 6 6 7 9 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT D 210 D 210 4 5 11 3 4 6 6 7 8 10 14 16 17 19 22 24 25 29 29 33 34 36 37 LCS_GDT V 211 V 211 4 6 11 3 4 4 5 7 8 9 11 16 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT G 212 G 212 4 6 11 3 3 4 5 5 8 11 13 15 17 19 22 24 24 25 29 33 34 36 37 LCS_GDT N 213 N 213 4 6 11 3 3 4 4 5 6 7 11 11 12 12 22 24 24 25 29 33 34 36 37 LCS_GDT P 214 P 214 4 6 11 3 3 4 4 5 7 7 8 9 11 12 14 16 19 20 24 26 33 34 37 LCS_GDT G 215 G 215 5 6 11 4 4 5 6 6 7 7 8 9 9 9 10 11 12 14 16 21 26 29 30 LCS_GDT S 216 S 216 5 6 13 4 4 5 6 6 7 7 8 9 9 9 12 13 19 22 25 30 33 35 36 LCS_GDT A 217 A 217 5 6 13 4 4 5 6 6 7 7 8 9 9 12 16 22 25 29 29 31 33 35 37 LCS_GDT S 218 S 218 5 6 13 4 4 5 6 7 8 8 10 13 14 16 20 23 25 29 29 31 33 35 37 LCS_GDT S 219 S 219 5 6 13 3 3 5 6 7 9 10 11 13 15 18 20 23 25 29 29 31 33 35 36 LCS_GDT A 220 A 220 3 6 13 0 3 4 6 6 7 8 9 13 14 16 20 23 25 29 29 31 33 35 37 LCS_GDT E 221 E 221 3 8 13 3 4 4 6 8 9 10 11 14 15 18 20 23 25 29 29 31 33 35 36 LCS_GDT M 222 M 222 4 8 13 4 4 5 5 8 9 10 12 14 15 18 20 23 25 29 29 31 33 35 36 LCS_GDT G 223 G 223 4 8 13 4 4 5 5 8 9 10 11 13 15 18 20 23 25 29 29 31 33 35 37 LCS_GDT G 224 G 224 4 8 13 4 4 5 5 8 9 10 12 14 15 18 20 23 25 29 29 31 33 35 37 LCS_GDT G 225 G 225 4 8 13 4 4 5 6 8 9 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT A 226 A 226 4 8 13 3 4 6 6 8 9 10 14 16 18 19 21 24 27 29 31 33 34 36 37 LCS_GDT A 227 A 227 4 8 13 3 4 6 6 8 9 10 14 16 18 19 22 24 27 29 31 33 34 36 37 LCS_GDT G 228 G 228 4 8 13 3 4 6 6 8 9 10 11 14 15 18 22 24 27 29 31 33 34 36 37 LCS_AVERAGE LCS_A: 10.87 ( 5.23 8.85 18.54 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 9 10 12 14 16 18 19 22 24 27 29 31 33 34 36 37 GDT PERCENT_AT 5.19 6.49 7.79 10.39 11.69 12.99 15.58 18.18 20.78 23.38 24.68 28.57 31.17 35.06 37.66 40.26 42.86 44.16 46.75 48.05 GDT RMS_LOCAL 0.38 0.55 0.89 1.27 1.41 2.02 2.32 2.63 3.02 3.57 3.68 4.54 4.60 5.21 5.41 5.66 5.87 6.78 7.00 6.60 GDT RMS_ALL_AT 29.70 24.84 18.77 19.57 19.58 19.07 19.27 19.42 18.70 14.37 14.41 18.63 18.63 14.65 14.62 14.98 14.95 14.64 14.47 14.35 # Checking swapping # possible swapping detected: F 159 F 159 # possible swapping detected: D 187 D 187 # possible swapping detected: Y 198 Y 198 # possible swapping detected: Y 204 Y 204 # possible swapping detected: D 210 D 210 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA G 152 G 152 10.383 0 0.547 0.547 10.580 0.000 0.000 - LGA G 153 G 153 7.726 0 0.628 0.628 9.711 0.000 0.000 - LGA G 154 G 154 8.359 0 0.047 0.047 8.359 0.000 0.000 - LGA G 155 G 155 9.130 0 0.536 0.536 9.777 0.000 0.000 - LGA G 156 G 156 12.749 0 0.079 0.079 16.100 0.000 0.000 - LGA G 157 G 157 16.095 0 0.053 0.053 17.915 0.000 0.000 - LGA G 158 G 158 22.157 0 0.197 0.197 23.827 0.000 0.000 - LGA F 159 F 159 25.439 0 0.072 1.365 27.861 0.000 0.000 26.064 LGA R 160 R 160 30.747 0 0.300 1.616 40.118 0.000 0.000 40.118 LGA V 161 V 161 34.745 0 0.471 1.335 36.905 0.000 0.000 36.905 LGA G 162 G 162 35.748 0 0.277 0.277 37.317 0.000 0.000 - LGA H 163 H 163 38.748 0 0.620 1.088 45.023 0.000 0.000 45.016 LGA T 164 T 164 35.558 0 0.091 0.107 36.896 0.000 0.000 35.110 LGA E 165 E 165 33.747 0 0.082 0.662 36.499 0.000 0.000 35.510 LGA A 166 A 166 29.870 0 0.115 0.171 31.201 0.000 0.000 - LGA G 167 G 167 27.814 0 0.087 0.087 28.401 0.000 0.000 - LGA G 168 G 168 24.744 0 0.499 0.499 25.752 0.000 0.000 - LGA G 169 G 169 19.856 0 0.035 0.035 21.853 0.000 0.000 - LGA G 170 G 170 14.544 0 0.075 0.075 16.322 0.000 0.000 - LGA G 171 G 171 9.263 0 0.239 0.239 11.353 0.000 0.000 - LGA R 172 R 172 5.390 0 0.090 1.289 13.810 13.636 4.959 13.297 LGA P 173 P 173 0.826 0 0.672 0.871 3.495 57.727 43.377 3.495 LGA L 174 L 174 0.594 0 0.688 0.580 2.579 68.182 70.909 1.478 LGA G 175 G 175 1.872 0 0.134 0.134 1.872 50.909 50.909 - LGA A 176 A 176 1.203 0 0.105 0.124 3.232 50.000 43.636 - LGA G 177 G 177 3.541 0 0.046 0.046 3.541 25.909 25.909 - LGA G 178 G 178 3.085 0 0.097 0.097 3.524 14.545 14.545 - LGA V 179 V 179 3.907 0 0.243 1.108 4.729 14.545 9.610 4.729 LGA S 180 S 180 3.374 0 0.503 0.535 4.146 15.455 15.152 3.336 LGA S 181 S 181 1.033 0 0.639 0.756 4.228 47.727 48.788 1.750 LGA L 182 L 182 3.788 0 0.564 0.893 9.984 35.000 17.500 9.809 LGA N 183 N 183 1.924 0 0.668 1.282 8.504 65.909 33.636 5.450 LGA L 184 L 184 2.888 0 0.333 0.349 6.244 32.727 17.955 6.244 LGA N 185 N 185 2.471 0 0.108 1.301 6.666 35.455 21.591 6.666 LGA G 186 G 186 2.923 0 0.398 0.398 6.477 13.636 13.636 - LGA D 187 D 187 8.353 0 0.171 1.234 10.476 0.000 0.000 9.154 LGA N 188 N 188 12.692 0 0.589 1.234 17.162 0.000 0.000 14.882 LGA A 189 A 189 17.190 0 0.327 0.415 20.122 0.000 0.000 - LGA T 190 T 190 21.149 0 0.131 0.245 22.659 0.000 0.000 19.100 LGA L 191 L 191 26.724 0 0.650 0.627 32.958 0.000 0.000 29.886 LGA G 192 G 192 28.002 0 0.719 0.719 28.002 0.000 0.000 - LGA A 193 A 193 26.533 0 0.122 0.175 27.685 0.000 0.000 - LGA P 194 P 194 23.037 0 0.650 0.600 24.815 0.000 0.000 19.986 LGA G 195 G 195 23.903 0 0.137 0.137 23.903 0.000 0.000 - LGA R 196 R 196 21.249 0 0.341 0.962 30.442 0.000 0.000 29.030 LGA G 197 G 197 15.335 0 0.062 0.062 16.964 0.000 0.000 - LGA Y 198 Y 198 14.163 0 0.083 1.421 22.172 0.000 0.000 22.172 LGA Q 199 Q 199 10.693 0 0.567 0.810 14.255 0.000 0.000 9.973 LGA L 200 L 200 16.148 0 0.180 1.195 21.458 0.000 0.000 21.458 LGA G 201 G 201 19.020 0 0.256 0.256 19.020 0.000 0.000 - LGA N 202 N 202 18.463 0 0.730 1.145 20.053 0.000 0.000 20.053 LGA D 203 D 203 19.753 0 0.413 0.935 25.658 0.000 0.000 25.658 LGA Y 204 Y 204 19.901 0 0.430 1.373 20.174 0.000 0.000 19.916 LGA A 205 A 205 20.389 0 0.083 0.112 22.405 0.000 0.000 - LGA G 206 G 206 15.435 0 0.045 0.045 17.668 0.000 0.000 - LGA N 207 N 207 13.438 0 0.228 0.775 15.702 0.000 0.000 15.583 LGA G 208 G 208 10.934 0 0.142 0.142 12.267 0.000 0.000 - LGA G 209 G 209 9.472 0 0.083 0.083 9.703 0.000 0.000 - LGA D 210 D 210 6.720 0 0.554 1.142 9.401 0.455 0.227 9.401 LGA V 211 V 211 4.624 0 0.071 1.003 7.867 2.273 1.299 7.867 LGA G 212 G 212 5.088 0 0.531 0.531 5.413 2.727 2.727 - LGA N 213 N 213 8.522 0 0.161 1.450 13.091 0.000 0.000 9.145 LGA P 214 P 214 13.920 0 0.109 0.126 15.128 0.000 0.000 11.048 LGA G 215 G 215 19.453 0 0.586 0.586 19.453 0.000 0.000 - LGA S 216 S 216 19.618 0 0.154 0.182 22.794 0.000 0.000 17.601 LGA A 217 A 217 23.550 0 0.069 0.089 24.596 0.000 0.000 - LGA S 218 S 218 26.362 0 0.086 0.155 29.026 0.000 0.000 27.472 LGA S 219 S 219 31.750 0 0.666 0.822 35.676 0.000 0.000 35.676 LGA A 220 A 220 32.526 0 0.617 0.574 34.278 0.000 0.000 - LGA E 221 E 221 32.070 0 0.541 0.601 37.529 0.000 0.000 37.529 LGA M 222 M 222 30.788 0 0.453 0.958 35.903 0.000 0.000 35.839 LGA G 223 G 223 24.831 0 0.137 0.137 27.008 0.000 0.000 - LGA G 224 G 224 21.707 0 0.106 0.106 22.525 0.000 0.000 - LGA G 225 G 225 17.872 0 0.113 0.113 19.387 0.000 0.000 - LGA A 226 A 226 18.009 0 0.100 0.144 18.914 0.000 0.000 - LGA A 227 A 227 15.303 0 0.067 0.065 18.119 0.000 0.000 - LGA G 228 G 228 16.175 0 0.116 0.116 17.233 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 77 308 308 100.00 476 476 100.00 77 38 SUMMARY(RMSD_GDC): 12.323 12.200 13.226 7.102 5.667 4.067 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 77 77 4.0 14 2.63 18.831 16.021 0.513 LGA_LOCAL RMSD: 2.630 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.415 Number of assigned atoms: 77 Std_ASGN_ATOMS RMSD: 12.323 Standard rmsd on all 77 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.851159 * X + -0.488161 * Y + 0.192942 * Z + -22.083797 Y_new = 0.041007 * X + 0.428291 * Y + 0.902710 * Z + -93.388306 Z_new = -0.523303 * X + -0.760438 * Y + 0.384562 * Z + 78.952888 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.048141 0.550723 -1.102590 [DEG: 2.7583 31.5541 -63.1738 ] ZXZ: 2.931024 1.176063 -2.538857 [DEG: 167.9353 67.3834 -145.4658 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS329_1-D3 REMARK 2: S0953s2-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS329_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 77 77 4.0 14 2.63 16.021 12.32 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS329_1-D3 PFRMAT TS TARGET S0953s2 MODEL 1 PARENT 2x3h_A ATOM 1183 N GLY 152 22.664 30.488 58.846 1.00 0.00 N ATOM 1184 CA GLY 152 22.541 29.124 59.250 1.00 0.00 C ATOM 1185 C GLY 152 21.168 28.635 58.897 1.00 0.00 C ATOM 1186 O GLY 152 21.012 27.606 58.242 1.00 0.00 O ATOM 1187 N GLY 153 20.137 29.359 59.382 1.00 0.00 N ATOM 1188 CA GLY 153 18.740 29.067 59.179 1.00 0.00 C ATOM 1189 C GLY 153 18.188 29.495 57.851 1.00 0.00 C ATOM 1190 O GLY 153 17.328 28.819 57.290 1.00 0.00 O ATOM 1191 N GLY 154 18.603 30.666 57.328 1.00 0.00 N ATOM 1192 CA GLY 154 17.961 31.106 56.119 1.00 0.00 C ATOM 1193 C GLY 154 18.779 32.180 55.481 1.00 0.00 C ATOM 1194 O GLY 154 19.658 32.772 56.106 1.00 0.00 O ATOM 1195 N GLY 155 18.542 32.412 54.174 1.00 0.00 N ATOM 1196 CA GLY 155 19.237 33.475 53.515 1.00 0.00 C ATOM 1197 C GLY 155 18.735 34.795 54.022 1.00 0.00 C ATOM 1198 O GLY 155 19.496 35.641 54.490 1.00 0.00 O ATOM 1199 N GLY 156 17.404 34.992 53.988 1.00 0.00 N ATOM 1200 CA GLY 156 16.857 36.250 54.410 1.00 0.00 C ATOM 1201 C GLY 156 15.682 35.960 55.285 1.00 0.00 C ATOM 1202 O GLY 156 14.815 35.162 54.938 1.00 0.00 O ATOM 1203 N GLY 157 15.614 36.642 56.445 1.00 0.00 N ATOM 1204 CA GLY 157 14.526 36.396 57.343 1.00 0.00 C ATOM 1205 C GLY 157 13.830 37.694 57.626 1.00 0.00 C ATOM 1206 O GLY 157 14.466 38.721 57.853 1.00 0.00 O ATOM 1207 N GLY 158 12.481 37.667 57.636 1.00 0.00 N ATOM 1208 CA GLY 158 11.715 38.847 57.938 1.00 0.00 C ATOM 1209 C GLY 158 10.739 38.446 58.998 1.00 0.00 C ATOM 1210 O GLY 158 9.882 37.594 58.766 1.00 0.00 O ATOM 1211 N PHE 159 10.817 39.088 60.183 1.00 0.00 N ATOM 1212 CA PHE 159 10.004 38.650 61.283 1.00 0.00 C ATOM 1213 CB PHE 159 10.851 37.996 62.389 1.00 0.00 C ATOM 1214 CG PHE 159 11.433 36.778 61.775 1.00 0.00 C ATOM 1215 CD1 PHE 159 12.448 36.890 60.853 1.00 0.00 C ATOM 1216 CD2 PHE 159 10.983 35.531 62.127 1.00 0.00 C ATOM 1217 CE1 PHE 159 12.993 35.777 60.264 1.00 0.00 C ATOM 1218 CE2 PHE 159 11.527 34.415 61.538 1.00 0.00 C ATOM 1219 CZ PHE 159 12.529 34.534 60.608 1.00 0.00 C ATOM 1220 C PHE 159 9.301 39.811 61.917 1.00 0.00 C ATOM 1221 O PHE 159 9.780 40.944 61.892 1.00 0.00 O ATOM 1222 N ARG 160 8.122 39.518 62.497 1.00 0.00 N ATOM 1223 CA ARG 160 7.309 40.419 63.269 1.00 0.00 C ATOM 1224 CB ARG 160 7.715 40.509 64.750 1.00 0.00 C ATOM 1225 CG ARG 160 7.581 39.157 65.456 1.00 0.00 C ATOM 1226 CD ARG 160 6.301 38.393 65.097 1.00 0.00 C ATOM 1227 NE ARG 160 5.159 39.043 65.800 1.00 0.00 N ATOM 1228 CZ ARG 160 3.987 39.309 65.153 1.00 0.00 C ATOM 1229 NH1 ARG 160 3.854 39.056 63.817 1.00 0.00 N ATOM 1230 NH2 ARG 160 2.942 39.844 65.848 1.00 0.00 N ATOM 1231 C ARG 160 7.219 41.786 62.672 1.00 0.00 C ATOM 1232 O ARG 160 7.883 42.719 63.119 1.00 0.00 O ATOM 1233 N VAL 161 6.368 41.904 61.634 1.00 0.00 N ATOM 1234 CA VAL 161 5.989 43.094 60.925 1.00 0.00 C ATOM 1235 CB VAL 161 5.160 44.078 61.721 1.00 0.00 C ATOM 1236 CG1 VAL 161 3.860 43.363 62.125 1.00 0.00 C ATOM 1237 CG2 VAL 161 5.965 44.653 62.898 1.00 0.00 C ATOM 1238 C VAL 161 7.143 43.790 60.290 1.00 0.00 C ATOM 1239 O VAL 161 7.137 45.010 60.156 1.00 0.00 O ATOM 1240 N GLY 162 8.155 43.032 59.839 1.00 0.00 N ATOM 1241 CA GLY 162 9.203 43.678 59.116 1.00 0.00 C ATOM 1242 C GLY 162 8.658 43.929 57.741 1.00 0.00 C ATOM 1243 O GLY 162 7.634 43.366 57.355 1.00 0.00 O ATOM 1244 N HIS 163 9.329 44.816 56.976 1.00 0.00 N ATOM 1245 CA HIS 163 8.959 45.104 55.619 1.00 0.00 C ATOM 1246 ND1 HIS 163 9.022 47.331 53.107 1.00 0.00 N ATOM 1247 CG HIS 163 8.092 46.853 54.006 1.00 0.00 C ATOM 1248 CB HIS 163 8.411 46.528 55.433 1.00 0.00 C ATOM 1249 NE2 HIS 163 7.098 47.170 52.004 1.00 0.00 N ATOM 1250 CD2 HIS 163 6.923 46.759 53.317 1.00 0.00 C ATOM 1251 CE1 HIS 163 8.375 47.501 51.929 1.00 0.00 C ATOM 1252 C HIS 163 10.217 45.012 54.814 1.00 0.00 C ATOM 1253 O HIS 163 11.199 45.688 55.116 1.00 0.00 O ATOM 1254 N THR 164 10.233 44.171 53.758 1.00 0.00 N ATOM 1255 CA THR 164 11.457 44.048 53.025 1.00 0.00 C ATOM 1256 CB THR 164 12.181 42.767 53.314 1.00 0.00 C ATOM 1257 OG1 THR 164 12.486 42.681 54.698 1.00 0.00 O ATOM 1258 CG2 THR 164 13.473 42.733 52.484 1.00 0.00 C ATOM 1259 C THR 164 11.190 44.088 51.552 1.00 0.00 C ATOM 1260 O THR 164 10.176 43.582 51.069 1.00 0.00 O ATOM 1261 N GLU 165 12.106 44.731 50.799 1.00 0.00 N ATOM 1262 CA GLU 165 11.989 44.722 49.372 1.00 0.00 C ATOM 1263 CB GLU 165 11.512 46.049 48.754 1.00 0.00 C ATOM 1264 CG GLU 165 12.358 47.281 49.067 1.00 0.00 C ATOM 1265 CD GLU 165 11.703 48.426 48.305 1.00 0.00 C ATOM 1266 OE1 GLU 165 10.620 48.890 48.745 1.00 0.00 O ATOM 1267 OE2 GLU 165 12.271 48.842 47.257 1.00 0.00 O ATOM 1268 C GLU 165 13.314 44.342 48.793 1.00 0.00 C ATOM 1269 O GLU 165 14.298 45.077 48.875 1.00 0.00 O ATOM 1270 N ALA 166 13.361 43.156 48.160 1.00 0.00 N ATOM 1271 CA ALA 166 14.596 42.678 47.624 1.00 0.00 C ATOM 1272 CB ALA 166 14.917 41.224 48.011 1.00 0.00 C ATOM 1273 C ALA 166 14.544 42.753 46.146 1.00 0.00 C ATOM 1274 O ALA 166 13.559 42.372 45.517 1.00 0.00 O ATOM 1275 N GLY 167 15.638 43.267 45.560 1.00 0.00 N ATOM 1276 CA GLY 167 15.695 43.374 44.140 1.00 0.00 C ATOM 1277 C GLY 167 17.109 43.149 43.724 1.00 0.00 C ATOM 1278 O GLY 167 18.053 43.470 44.449 1.00 0.00 O ATOM 1279 N GLY 168 17.272 42.557 42.525 1.00 0.00 N ATOM 1280 CA GLY 168 18.582 42.374 41.985 1.00 0.00 C ATOM 1281 C GLY 168 19.388 41.588 42.962 1.00 0.00 C ATOM 1282 O GLY 168 20.534 41.924 43.253 1.00 0.00 O ATOM 1283 N GLY 169 18.805 40.517 43.520 1.00 0.00 N ATOM 1284 CA GLY 169 19.585 39.788 44.465 1.00 0.00 C ATOM 1285 C GLY 169 19.496 38.329 44.152 1.00 0.00 C ATOM 1286 O GLY 169 18.547 37.872 43.518 1.00 0.00 O ATOM 1287 N GLY 170 20.509 37.560 44.595 1.00 0.00 N ATOM 1288 CA GLY 170 20.505 36.134 44.415 1.00 0.00 C ATOM 1289 C GLY 170 20.594 35.562 45.798 1.00 0.00 C ATOM 1290 O GLY 170 21.293 36.120 46.640 1.00 0.00 O ATOM 1291 N GLY 171 19.913 34.426 46.076 1.00 0.00 N ATOM 1292 CA GLY 171 19.950 33.955 47.439 1.00 0.00 C ATOM 1293 C GLY 171 20.320 32.497 47.532 1.00 0.00 C ATOM 1294 O GLY 171 19.477 31.611 47.386 1.00 0.00 O ATOM 1295 N ARG 172 21.593 32.215 47.886 1.00 0.00 N ATOM 1296 CA ARG 172 22.075 30.860 47.965 1.00 0.00 C ATOM 1297 CB ARG 172 23.246 30.594 47.009 1.00 0.00 C ATOM 1298 CG ARG 172 22.915 30.904 45.551 1.00 0.00 C ATOM 1299 CD ARG 172 22.824 32.400 45.239 1.00 0.00 C ATOM 1300 NE ARG 172 22.500 32.525 43.792 1.00 0.00 N ATOM 1301 CZ ARG 172 23.501 32.439 42.867 1.00 0.00 C ATOM 1302 NH1 ARG 172 24.782 32.205 43.277 1.00 0.00 N ATOM 1303 NH2 ARG 172 23.223 32.598 41.540 1.00 0.00 N ATOM 1304 C ARG 172 22.602 30.606 49.350 1.00 0.00 C ATOM 1305 O ARG 172 23.004 31.528 50.061 1.00 0.00 O ATOM 1306 N PRO 173 22.547 29.363 49.768 1.00 0.00 N ATOM 1307 CA PRO 173 23.052 28.987 51.070 1.00 0.00 C ATOM 1308 CD PRO 173 21.438 28.515 49.354 1.00 0.00 C ATOM 1309 CB PRO 173 22.399 27.645 51.401 1.00 0.00 C ATOM 1310 CG PRO 173 21.101 27.647 50.576 1.00 0.00 C ATOM 1311 C PRO 173 24.551 28.924 51.196 1.00 0.00 C ATOM 1312 O PRO 173 25.053 28.973 52.318 1.00 0.00 O ATOM 1313 N LEU 174 25.291 28.827 50.075 1.00 0.00 N ATOM 1314 CA LEU 174 26.712 28.584 50.109 1.00 0.00 C ATOM 1315 CB LEU 174 27.296 28.207 48.739 1.00 0.00 C ATOM 1316 CG LEU 174 26.750 26.883 48.178 1.00 0.00 C ATOM 1317 CD1 LEU 174 27.388 26.569 46.816 1.00 0.00 C ATOM 1318 CD2 LEU 174 26.899 25.735 49.190 1.00 0.00 C ATOM 1319 C LEU 174 27.452 29.794 50.592 1.00 0.00 C ATOM 1320 O LEU 174 26.854 30.760 51.061 1.00 0.00 O ATOM 1321 N GLY 175 28.802 29.718 50.605 1.00 0.00 N ATOM 1322 CA GLY 175 29.564 30.884 50.955 1.00 0.00 C ATOM 1323 C GLY 175 30.695 30.499 51.854 1.00 0.00 C ATOM 1324 O GLY 175 30.894 29.319 52.143 1.00 0.00 O ATOM 1325 N ALA 176 31.492 31.512 52.273 1.00 0.00 N ATOM 1326 CA ALA 176 32.555 31.326 53.223 1.00 0.00 C ATOM 1327 CB ALA 176 33.394 30.060 52.978 1.00 0.00 C ATOM 1328 C ALA 176 33.510 32.478 53.120 1.00 0.00 C ATOM 1329 O ALA 176 33.609 33.125 52.077 1.00 0.00 O ATOM 1330 N GLY 177 34.249 32.746 54.221 1.00 0.00 N ATOM 1331 CA GLY 177 35.311 33.720 54.222 1.00 0.00 C ATOM 1332 C GLY 177 34.943 35.031 54.856 1.00 0.00 C ATOM 1333 O GLY 177 33.774 35.380 55.008 1.00 0.00 O ATOM 1334 N GLY 178 36.006 35.796 55.212 1.00 0.00 N ATOM 1335 CA GLY 178 35.999 37.110 55.804 1.00 0.00 C ATOM 1336 C GLY 178 36.545 36.994 57.191 1.00 0.00 C ATOM 1337 O GLY 178 35.890 36.417 58.053 1.00 0.00 O ATOM 1338 N VAL 179 37.742 37.578 57.455 1.00 0.00 N ATOM 1339 CA VAL 179 38.324 37.433 58.766 1.00 0.00 C ATOM 1340 CB VAL 179 38.947 36.079 59.027 1.00 0.00 C ATOM 1341 CG1 VAL 179 37.908 34.953 59.114 1.00 0.00 C ATOM 1342 CG2 VAL 179 40.002 35.853 57.930 1.00 0.00 C ATOM 1343 C VAL 179 39.522 38.306 58.951 1.00 0.00 C ATOM 1344 O VAL 179 39.852 39.158 58.125 1.00 0.00 O ATOM 1345 N SER 180 40.123 38.159 60.155 1.00 0.00 N ATOM 1346 CA SER 180 41.361 38.763 60.558 1.00 0.00 C ATOM 1347 CB SER 180 41.538 38.790 62.089 1.00 0.00 C ATOM 1348 OG SER 180 41.591 37.469 62.608 1.00 0.00 O ATOM 1349 C SER 180 42.536 38.029 59.976 1.00 0.00 C ATOM 1350 O SER 180 43.344 38.605 59.247 1.00 0.00 O ATOM 1351 N SER 181 42.653 36.715 60.272 1.00 0.00 N ATOM 1352 CA SER 181 43.790 35.956 59.829 1.00 0.00 C ATOM 1353 CB SER 181 44.959 35.977 60.828 1.00 0.00 C ATOM 1354 OG SER 181 45.438 37.305 60.987 1.00 0.00 O ATOM 1355 C SER 181 43.355 34.537 59.697 1.00 0.00 C ATOM 1356 O SER 181 42.177 34.224 59.866 1.00 0.00 O ATOM 1357 N LEU 182 44.303 33.633 59.376 1.00 0.00 N ATOM 1358 CA LEU 182 43.941 32.257 59.213 1.00 0.00 C ATOM 1359 CB LEU 182 44.829 31.489 58.218 1.00 0.00 C ATOM 1360 CG LEU 182 44.730 32.002 56.767 1.00 0.00 C ATOM 1361 CD1 LEU 182 45.302 33.420 56.623 1.00 0.00 C ATOM 1362 CD2 LEU 182 45.372 31.016 55.779 1.00 0.00 C ATOM 1363 C LEU 182 44.055 31.583 60.540 1.00 0.00 C ATOM 1364 O LEU 182 45.110 31.568 61.170 1.00 0.00 O ATOM 1365 N ASN 183 42.926 31.015 60.990 1.00 0.00 N ATOM 1366 CA ASN 183 42.834 30.313 62.231 1.00 0.00 C ATOM 1367 CB ASN 183 42.487 31.222 63.426 1.00 0.00 C ATOM 1368 CG ASN 183 41.174 31.941 63.153 1.00 0.00 C ATOM 1369 OD1 ASN 183 40.652 31.925 62.039 1.00 0.00 O ATOM 1370 ND2 ASN 183 40.635 32.618 64.204 1.00 0.00 N ATOM 1371 C ASN 183 41.745 29.317 62.025 1.00 0.00 C ATOM 1372 O ASN 183 41.541 28.849 60.905 1.00 0.00 O ATOM 1373 N LEU 184 41.028 28.946 63.098 1.00 0.00 N ATOM 1374 CA LEU 184 39.990 27.976 62.934 1.00 0.00 C ATOM 1375 CB LEU 184 39.461 27.397 64.257 1.00 0.00 C ATOM 1376 CG LEU 184 40.545 26.658 65.060 1.00 0.00 C ATOM 1377 CD1 LEU 184 39.952 25.964 66.297 1.00 0.00 C ATOM 1378 CD2 LEU 184 41.353 25.707 64.163 1.00 0.00 C ATOM 1379 C LEU 184 38.842 28.631 62.239 1.00 0.00 C ATOM 1380 O LEU 184 38.657 29.846 62.318 1.00 0.00 O ATOM 1381 N ASN 185 38.040 27.829 61.513 1.00 0.00 N ATOM 1382 CA ASN 185 36.943 28.401 60.794 1.00 0.00 C ATOM 1383 CB ASN 185 36.747 27.819 59.381 1.00 0.00 C ATOM 1384 CG ASN 185 35.551 28.511 58.730 1.00 0.00 C ATOM 1385 OD1 ASN 185 34.406 28.313 59.139 1.00 0.00 O ATOM 1386 ND2 ASN 185 35.818 29.342 57.690 1.00 0.00 N ATOM 1387 C ASN 185 35.693 28.133 61.559 1.00 0.00 C ATOM 1388 O ASN 185 35.363 26.985 61.862 1.00 0.00 O ATOM 1389 N GLY 186 34.975 29.215 61.910 1.00 0.00 N ATOM 1390 CA GLY 186 33.705 29.058 62.553 1.00 0.00 C ATOM 1391 C GLY 186 33.857 28.268 63.805 1.00 0.00 C ATOM 1392 O GLY 186 33.371 27.141 63.892 1.00 0.00 O ATOM 1393 N ASP 187 34.537 28.829 64.820 1.00 0.00 N ATOM 1394 CA ASP 187 34.736 28.034 65.995 1.00 0.00 C ATOM 1395 CB ASP 187 35.668 28.688 67.025 1.00 0.00 C ATOM 1396 CG ASP 187 36.209 27.599 67.943 1.00 0.00 C ATOM 1397 OD1 ASP 187 35.707 26.446 67.854 1.00 0.00 O ATOM 1398 OD2 ASP 187 37.137 27.903 68.739 1.00 0.00 O ATOM 1399 C ASP 187 33.408 27.823 66.611 1.00 0.00 C ATOM 1400 O ASP 187 32.868 28.719 67.245 1.00 0.00 O ATOM 1401 N ASN 188 32.821 26.631 66.410 1.00 0.00 N ATOM 1402 CA ASN 188 31.527 26.392 66.968 1.00 0.00 C ATOM 1403 CB ASN 188 30.928 25.045 66.535 1.00 0.00 C ATOM 1404 CG ASN 188 29.557 24.921 67.186 1.00 0.00 C ATOM 1405 OD1 ASN 188 28.597 25.564 66.766 1.00 0.00 O ATOM 1406 ND2 ASN 188 29.460 24.066 68.239 1.00 0.00 N ATOM 1407 C ASN 188 31.630 26.344 68.452 1.00 0.00 C ATOM 1408 O ASN 188 30.837 26.973 69.152 1.00 0.00 O ATOM 1409 N ALA 189 32.626 25.603 68.980 1.00 0.00 N ATOM 1410 CA ALA 189 32.663 25.504 70.404 1.00 0.00 C ATOM 1411 CB ALA 189 33.513 24.331 70.920 1.00 0.00 C ATOM 1412 C ALA 189 33.284 26.754 70.901 1.00 0.00 C ATOM 1413 O ALA 189 34.478 26.815 71.187 1.00 0.00 O ATOM 1414 N THR 190 32.450 27.792 71.039 1.00 0.00 N ATOM 1415 CA THR 190 32.940 29.030 71.531 1.00 0.00 C ATOM 1416 CB THR 190 33.275 30.033 70.466 1.00 0.00 C ATOM 1417 OG1 THR 190 32.119 30.372 69.713 1.00 0.00 O ATOM 1418 CG2 THR 190 34.352 29.432 69.552 1.00 0.00 C ATOM 1419 C THR 190 31.848 29.608 72.358 1.00 0.00 C ATOM 1420 O THR 190 30.663 29.444 72.064 1.00 0.00 O ATOM 1421 N LEU 191 32.241 30.255 73.459 1.00 0.00 N ATOM 1422 CA LEU 191 31.324 30.945 74.301 1.00 0.00 C ATOM 1423 CB LEU 191 30.772 30.092 75.457 1.00 0.00 C ATOM 1424 CG LEU 191 29.781 30.859 76.355 1.00 0.00 C ATOM 1425 CD1 LEU 191 28.481 31.178 75.602 1.00 0.00 C ATOM 1426 CD2 LEU 191 29.548 30.131 77.687 1.00 0.00 C ATOM 1427 C LEU 191 32.169 31.993 74.924 1.00 0.00 C ATOM 1428 O LEU 191 33.174 31.668 75.553 1.00 0.00 O ATOM 1429 N GLY 192 31.809 33.280 74.775 1.00 0.00 N ATOM 1430 CA GLY 192 32.694 34.236 75.359 1.00 0.00 C ATOM 1431 C GLY 192 31.930 35.457 75.729 1.00 0.00 C ATOM 1432 O GLY 192 30.776 35.634 75.342 1.00 0.00 O ATOM 1433 N ALA 193 32.580 36.344 76.509 1.00 0.00 N ATOM 1434 CA ALA 193 31.898 37.538 76.896 1.00 0.00 C ATOM 1435 CB ALA 193 32.067 37.888 78.384 1.00 0.00 C ATOM 1436 C ALA 193 32.464 38.680 76.113 1.00 0.00 C ATOM 1437 O ALA 193 33.658 38.965 76.147 1.00 0.00 O ATOM 1438 N PRO 194 31.658 39.228 75.259 1.00 0.00 N ATOM 1439 CA PRO 194 32.013 40.469 74.625 1.00 0.00 C ATOM 1440 CD PRO 194 30.840 38.391 74.396 1.00 0.00 C ATOM 1441 CB PRO 194 31.514 40.362 73.183 1.00 0.00 C ATOM 1442 CG PRO 194 30.389 39.317 73.256 1.00 0.00 C ATOM 1443 C PRO 194 31.464 41.680 75.308 1.00 0.00 C ATOM 1444 O PRO 194 32.012 42.773 75.159 1.00 0.00 O ATOM 1445 N GLY 195 30.331 41.505 76.008 1.00 0.00 N ATOM 1446 CA GLY 195 29.668 42.602 76.645 1.00 0.00 C ATOM 1447 C GLY 195 28.719 43.230 75.659 1.00 0.00 C ATOM 1448 O GLY 195 29.128 43.824 74.658 1.00 0.00 O ATOM 1449 N ARG 196 27.411 43.150 75.972 1.00 0.00 N ATOM 1450 CA ARG 196 26.362 43.761 75.208 1.00 0.00 C ATOM 1451 CB ARG 196 26.313 45.286 75.389 1.00 0.00 C ATOM 1452 CG ARG 196 25.178 45.970 74.627 1.00 0.00 C ATOM 1453 CD ARG 196 24.859 47.368 75.164 1.00 0.00 C ATOM 1454 NE ARG 196 24.173 47.186 76.474 1.00 0.00 N ATOM 1455 CZ ARG 196 24.233 48.161 77.433 1.00 0.00 C ATOM 1456 NH1 ARG 196 24.960 49.293 77.219 1.00 0.00 N ATOM 1457 NH2 ARG 196 23.558 47.996 78.607 1.00 0.00 N ATOM 1458 C ARG 196 26.458 43.444 73.743 1.00 0.00 C ATOM 1459 O ARG 196 26.729 44.330 72.928 1.00 0.00 O ATOM 1460 N GLY 197 26.256 42.158 73.366 1.00 0.00 N ATOM 1461 CA GLY 197 26.207 41.868 71.959 1.00 0.00 C ATOM 1462 C GLY 197 25.958 40.406 71.704 1.00 0.00 C ATOM 1463 O GLY 197 26.382 39.551 72.472 1.00 0.00 O ATOM 1464 N TYR 198 25.306 40.085 70.562 1.00 0.00 N ATOM 1465 CA TYR 198 24.961 38.734 70.168 1.00 0.00 C ATOM 1466 CB TYR 198 23.443 38.546 70.000 1.00 0.00 C ATOM 1467 CG TYR 198 22.867 38.601 71.375 1.00 0.00 C ATOM 1468 CD1 TYR 198 22.887 39.766 72.108 1.00 0.00 C ATOM 1469 CD2 TYR 198 22.285 37.483 71.931 1.00 0.00 C ATOM 1470 CE1 TYR 198 22.354 39.806 73.378 1.00 0.00 C ATOM 1471 CE2 TYR 198 21.751 37.517 73.198 1.00 0.00 C ATOM 1472 CZ TYR 198 21.789 38.681 73.928 1.00 0.00 C ATOM 1473 OH TYR 198 21.242 38.718 75.230 1.00 0.00 O ATOM 1474 C TYR 198 25.646 38.491 68.856 1.00 0.00 C ATOM 1475 O TYR 198 25.801 39.428 68.073 1.00 0.00 O ATOM 1476 N GLN 199 26.014 37.217 68.553 1.00 0.00 N ATOM 1477 CA GLN 199 26.900 36.910 67.456 1.00 0.00 C ATOM 1478 CB GLN 199 27.032 35.394 67.201 1.00 0.00 C ATOM 1479 CG GLN 199 27.714 34.614 68.333 1.00 0.00 C ATOM 1480 CD GLN 199 26.656 34.105 69.305 1.00 0.00 C ATOM 1481 OE1 GLN 199 25.457 34.229 69.064 1.00 0.00 O ATOM 1482 NE2 GLN 199 27.115 33.498 70.434 1.00 0.00 N ATOM 1483 C GLN 199 26.410 37.534 66.191 1.00 0.00 C ATOM 1484 O GLN 199 27.146 38.276 65.539 1.00 0.00 O ATOM 1485 N LEU 200 25.151 37.268 65.826 1.00 0.00 N ATOM 1486 CA LEU 200 24.531 37.848 64.673 1.00 0.00 C ATOM 1487 CB LEU 200 24.792 37.079 63.381 1.00 0.00 C ATOM 1488 CG LEU 200 24.250 37.766 62.116 1.00 0.00 C ATOM 1489 CD1 LEU 200 22.731 37.626 61.990 1.00 0.00 C ATOM 1490 CD2 LEU 200 24.716 39.231 62.055 1.00 0.00 C ATOM 1491 C LEU 200 23.083 37.596 64.917 1.00 0.00 C ATOM 1492 O LEU 200 22.713 36.452 65.168 1.00 0.00 O ATOM 1493 N GLY 201 22.221 38.616 64.775 1.00 0.00 N ATOM 1494 CA GLY 201 20.861 38.467 65.217 1.00 0.00 C ATOM 1495 C GLY 201 19.977 37.664 64.311 1.00 0.00 C ATOM 1496 O GLY 201 20.244 37.505 63.121 1.00 0.00 O ATOM 1497 N ASN 202 18.884 37.138 64.923 1.00 0.00 N ATOM 1498 CA ASN 202 17.794 36.395 64.339 1.00 0.00 C ATOM 1499 CB ASN 202 17.882 36.184 62.804 1.00 0.00 C ATOM 1500 CG ASN 202 18.861 35.077 62.429 1.00 0.00 C ATOM 1501 OD1 ASN 202 18.658 34.387 61.430 1.00 0.00 O ATOM 1502 ND2 ASN 202 19.939 34.877 63.235 1.00 0.00 N ATOM 1503 C ASN 202 17.770 35.085 65.071 1.00 0.00 C ATOM 1504 O ASN 202 18.506 34.929 66.045 1.00 0.00 O ATOM 1505 N ASP 203 16.951 34.089 64.671 1.00 0.00 N ATOM 1506 CA ASP 203 16.011 34.095 63.593 1.00 0.00 C ATOM 1507 CB ASP 203 16.228 32.910 62.635 1.00 0.00 C ATOM 1508 CG ASP 203 15.332 33.080 61.416 1.00 0.00 C ATOM 1509 OD1 ASP 203 15.238 34.228 60.910 1.00 0.00 O ATOM 1510 OD2 ASP 203 14.723 32.066 60.982 1.00 0.00 O ATOM 1511 C ASP 203 14.683 33.895 64.235 1.00 0.00 C ATOM 1512 O ASP 203 14.128 34.793 64.865 1.00 0.00 O ATOM 1513 N TYR 204 14.118 32.703 63.995 1.00 0.00 N ATOM 1514 CA TYR 204 12.910 32.236 64.598 1.00 0.00 C ATOM 1515 CB TYR 204 11.621 32.761 63.963 1.00 0.00 C ATOM 1516 CG TYR 204 10.494 32.161 64.731 1.00 0.00 C ATOM 1517 CD1 TYR 204 10.109 32.695 65.939 1.00 0.00 C ATOM 1518 CD2 TYR 204 9.826 31.065 64.238 1.00 0.00 C ATOM 1519 CE1 TYR 204 9.070 32.140 66.647 1.00 0.00 C ATOM 1520 CE2 TYR 204 8.785 30.505 64.943 1.00 0.00 C ATOM 1521 CZ TYR 204 8.407 31.046 66.149 1.00 0.00 C ATOM 1522 OH TYR 204 7.341 30.482 66.881 1.00 0.00 O ATOM 1523 C TYR 204 12.934 30.762 64.395 1.00 0.00 C ATOM 1524 O TYR 204 13.293 30.004 65.290 1.00 0.00 O ATOM 1525 N ALA 205 12.489 30.337 63.195 1.00 0.00 N ATOM 1526 CA ALA 205 12.437 28.961 62.781 1.00 0.00 C ATOM 1527 CB ALA 205 11.385 28.674 61.697 1.00 0.00 C ATOM 1528 C ALA 205 13.770 28.567 62.225 1.00 0.00 C ATOM 1529 O ALA 205 14.676 29.392 62.124 1.00 0.00 O ATOM 1530 N GLY 206 13.930 27.267 61.880 1.00 0.00 N ATOM 1531 CA GLY 206 15.194 26.819 61.364 1.00 0.00 C ATOM 1532 C GLY 206 14.980 25.738 60.359 1.00 0.00 C ATOM 1533 O GLY 206 13.987 25.012 60.372 1.00 0.00 O ATOM 1534 N ASN 207 15.961 25.632 59.447 1.00 0.00 N ATOM 1535 CA ASN 207 15.985 24.719 58.347 1.00 0.00 C ATOM 1536 CB ASN 207 14.600 24.507 57.711 1.00 0.00 C ATOM 1537 CG ASN 207 14.652 23.276 56.817 1.00 0.00 C ATOM 1538 OD1 ASN 207 15.494 22.398 56.998 1.00 0.00 O ATOM 1539 ND2 ASN 207 13.726 23.208 55.824 1.00 0.00 N ATOM 1540 C ASN 207 16.814 25.494 57.387 1.00 0.00 C ATOM 1541 O ASN 207 17.582 26.355 57.808 1.00 0.00 O ATOM 1542 N GLY 208 16.736 25.216 56.079 1.00 0.00 N ATOM 1543 CA GLY 208 17.423 26.123 55.212 1.00 0.00 C ATOM 1544 C GLY 208 16.333 26.708 54.381 1.00 0.00 C ATOM 1545 O GLY 208 15.624 25.978 53.697 1.00 0.00 O ATOM 1546 N GLY 209 16.147 28.037 54.418 1.00 0.00 N ATOM 1547 CA GLY 209 15.104 28.612 53.616 1.00 0.00 C ATOM 1548 C GLY 209 15.691 29.821 52.975 1.00 0.00 C ATOM 1549 O GLY 209 16.390 30.594 53.627 1.00 0.00 O ATOM 1550 N ASP 210 15.426 30.020 51.671 1.00 0.00 N ATOM 1551 CA ASP 210 16.014 31.159 51.029 1.00 0.00 C ATOM 1552 CB ASP 210 15.698 31.241 49.529 1.00 0.00 C ATOM 1553 CG ASP 210 16.610 32.287 48.898 1.00 0.00 C ATOM 1554 OD1 ASP 210 16.926 33.313 49.558 1.00 0.00 O ATOM 1555 OD2 ASP 210 17.004 32.065 47.721 1.00 0.00 O ATOM 1556 C ASP 210 15.462 32.386 51.678 1.00 0.00 C ATOM 1557 O ASP 210 16.210 33.279 52.073 1.00 0.00 O ATOM 1558 N VAL 211 14.123 32.459 51.807 1.00 0.00 N ATOM 1559 CA VAL 211 13.537 33.602 52.444 1.00 0.00 C ATOM 1560 CB VAL 211 12.818 34.510 51.487 1.00 0.00 C ATOM 1561 CG1 VAL 211 12.144 35.636 52.287 1.00 0.00 C ATOM 1562 CG2 VAL 211 13.829 35.022 50.445 1.00 0.00 C ATOM 1563 C VAL 211 12.542 33.085 53.431 1.00 0.00 C ATOM 1564 O VAL 211 11.628 32.348 53.073 1.00 0.00 O ATOM 1565 N GLY 212 12.691 33.472 54.715 1.00 0.00 N ATOM 1566 CA GLY 212 11.763 33.007 55.705 1.00 0.00 C ATOM 1567 C GLY 212 11.054 34.208 56.238 1.00 0.00 C ATOM 1568 O GLY 212 11.659 35.071 56.873 1.00 0.00 O ATOM 1569 N ASN 213 9.730 34.294 56.002 1.00 0.00 N ATOM 1570 CA ASN 213 9.049 35.461 56.476 1.00 0.00 C ATOM 1571 CB ASN 213 8.707 36.471 55.366 1.00 0.00 C ATOM 1572 CG ASN 213 7.912 35.788 54.268 1.00 0.00 C ATOM 1573 OD1 ASN 213 7.591 34.603 54.344 1.00 0.00 O ATOM 1574 ND2 ASN 213 7.623 36.563 53.189 1.00 0.00 N ATOM 1575 C ASN 213 7.826 35.135 57.266 1.00 0.00 C ATOM 1576 O ASN 213 6.865 34.544 56.771 1.00 0.00 O ATOM 1577 N PRO 214 7.917 35.402 58.546 1.00 0.00 N ATOM 1578 CA PRO 214 6.704 35.319 59.316 1.00 0.00 C ATOM 1579 CD PRO 214 9.024 34.789 59.257 1.00 0.00 C ATOM 1580 CB PRO 214 7.000 34.429 60.518 1.00 0.00 C ATOM 1581 CG PRO 214 8.515 34.550 60.686 1.00 0.00 C ATOM 1582 C PRO 214 6.164 36.668 59.694 1.00 0.00 C ATOM 1583 O PRO 214 6.942 37.542 60.076 1.00 0.00 O ATOM 1584 N GLY 215 4.830 36.838 59.642 1.00 0.00 N ATOM 1585 CA GLY 215 4.161 38.019 60.117 1.00 0.00 C ATOM 1586 C GLY 215 4.766 39.244 59.515 1.00 0.00 C ATOM 1587 O GLY 215 4.766 40.301 60.145 1.00 0.00 O ATOM 1588 N SER 216 5.289 39.154 58.281 1.00 0.00 N ATOM 1589 CA SER 216 5.919 40.301 57.697 1.00 0.00 C ATOM 1590 CB SER 216 7.452 40.287 57.828 1.00 0.00 C ATOM 1591 OG SER 216 7.833 40.288 59.197 1.00 0.00 O ATOM 1592 C SER 216 5.602 40.279 56.239 1.00 0.00 C ATOM 1593 O SER 216 4.919 39.375 55.760 1.00 0.00 O ATOM 1594 N ALA 217 6.070 41.306 55.496 1.00 0.00 N ATOM 1595 CA ALA 217 5.812 41.338 54.086 1.00 0.00 C ATOM 1596 CB ALA 217 4.947 42.534 53.653 1.00 0.00 C ATOM 1597 C ALA 217 7.122 41.456 53.378 1.00 0.00 C ATOM 1598 O ALA 217 7.991 42.231 53.777 1.00 0.00 O ATOM 1599 N SER 218 7.297 40.677 52.291 1.00 0.00 N ATOM 1600 CA SER 218 8.527 40.724 51.562 1.00 0.00 C ATOM 1601 CB SER 218 9.386 39.462 51.740 1.00 0.00 C ATOM 1602 OG SER 218 8.691 38.331 51.236 1.00 0.00 O ATOM 1603 C SER 218 8.192 40.822 50.113 1.00 0.00 C ATOM 1604 O SER 218 7.202 40.256 49.652 1.00 0.00 O ATOM 1605 N SER 219 9.007 41.579 49.358 1.00 0.00 N ATOM 1606 CA SER 219 8.797 41.672 47.946 1.00 0.00 C ATOM 1607 CB SER 219 8.445 43.095 47.476 1.00 0.00 C ATOM 1608 OG SER 219 8.250 43.120 46.069 1.00 0.00 O ATOM 1609 C SER 219 10.096 41.299 47.324 1.00 0.00 C ATOM 1610 O SER 219 11.133 41.877 47.647 1.00 0.00 O ATOM 1611 N ALA 220 10.080 40.296 46.425 1.00 0.00 N ATOM 1612 CA ALA 220 11.294 39.916 45.771 1.00 0.00 C ATOM 1613 CB ALA 220 11.629 38.421 45.899 1.00 0.00 C ATOM 1614 C ALA 220 11.083 40.207 44.335 1.00 0.00 C ATOM 1615 O ALA 220 10.046 39.864 43.770 1.00 0.00 O ATOM 1616 N GLU 221 12.058 40.882 43.707 1.00 0.00 N ATOM 1617 CA GLU 221 11.848 41.168 42.331 1.00 0.00 C ATOM 1618 CB GLU 221 11.249 42.564 42.101 1.00 0.00 C ATOM 1619 CG GLU 221 9.842 42.653 42.706 1.00 0.00 C ATOM 1620 CD GLU 221 9.275 44.039 42.456 1.00 0.00 C ATOM 1621 OE1 GLU 221 9.636 44.978 43.211 1.00 0.00 O ATOM 1622 OE2 GLU 221 8.468 44.176 41.496 1.00 0.00 O ATOM 1623 C GLU 221 13.140 41.011 41.605 1.00 0.00 C ATOM 1624 O GLU 221 14.193 41.459 42.055 1.00 0.00 O ATOM 1625 N MET 222 13.068 40.317 40.456 1.00 0.00 N ATOM 1626 CA MET 222 14.213 40.112 39.624 1.00 0.00 C ATOM 1627 CB MET 222 14.661 41.407 38.931 1.00 0.00 C ATOM 1628 CG MET 222 13.607 41.878 37.928 1.00 0.00 C ATOM 1629 SD MET 222 14.001 43.411 37.039 1.00 0.00 S ATOM 1630 CE MET 222 13.204 44.513 38.243 1.00 0.00 C ATOM 1631 C MET 222 15.316 39.541 40.445 1.00 0.00 C ATOM 1632 O MET 222 16.471 39.947 40.336 1.00 0.00 O ATOM 1633 N GLY 223 14.982 38.550 41.291 1.00 0.00 N ATOM 1634 CA GLY 223 15.991 37.950 42.114 1.00 0.00 C ATOM 1635 C GLY 223 16.117 36.515 41.715 1.00 0.00 C ATOM 1636 O GLY 223 15.588 36.081 40.694 1.00 0.00 O ATOM 1637 N GLY 224 16.863 35.731 42.511 1.00 0.00 N ATOM 1638 CA GLY 224 16.989 34.329 42.229 1.00 0.00 C ATOM 1639 C GLY 224 17.087 33.650 43.556 1.00 0.00 C ATOM 1640 O GLY 224 17.856 34.075 44.413 1.00 0.00 O ATOM 1641 N GLY 225 16.324 32.556 43.759 1.00 0.00 N ATOM 1642 CA GLY 225 16.392 31.929 45.054 1.00 0.00 C ATOM 1643 C GLY 225 16.609 30.459 44.884 1.00 0.00 C ATOM 1644 O GLY 225 15.837 29.776 44.213 1.00 0.00 O ATOM 1645 N ALA 226 17.662 29.923 45.531 1.00 0.00 N ATOM 1646 CA ALA 226 17.930 28.522 45.403 1.00 0.00 C ATOM 1647 CB ALA 226 19.344 28.221 44.876 1.00 0.00 C ATOM 1648 C ALA 226 17.820 27.905 46.760 1.00 0.00 C ATOM 1649 O ALA 226 18.397 28.397 47.728 1.00 0.00 O ATOM 1650 N ALA 227 17.082 26.783 46.845 1.00 0.00 N ATOM 1651 CA ALA 227 16.867 26.094 48.082 1.00 0.00 C ATOM 1652 CB ALA 227 15.397 25.689 48.287 1.00 0.00 C ATOM 1653 C ALA 227 17.641 24.818 48.016 1.00 0.00 C ATOM 1654 O ALA 227 17.735 24.187 46.964 1.00 0.00 O ATOM 1655 N GLY 228 18.226 24.402 49.154 1.00 0.00 N ATOM 1656 CA GLY 228 18.962 23.174 49.138 1.00 0.00 C ATOM 1657 C GLY 228 17.969 22.082 49.342 1.00 0.00 C ATOM 1658 O GLY 228 16.763 22.314 49.374 1.00 0.00 O TER END