####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name S0953s2TS492_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name S0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS492_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 6 - 21 4.75 17.33 LCS_AVERAGE: 33.88 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 3 - 10 1.87 17.26 LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.88 20.43 LCS_AVERAGE: 14.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 15 - 20 0.90 19.32 LCS_AVERAGE: 9.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 13 3 4 5 6 6 7 9 9 10 11 12 14 18 19 20 21 22 24 27 29 LCS_GDT V 3 V 3 4 8 13 3 4 5 6 8 8 9 9 9 11 12 14 18 19 20 21 22 24 27 29 LCS_GDT Q 4 Q 4 4 8 13 3 4 5 6 8 8 9 9 10 12 12 14 18 19 20 22 23 24 27 29 LCS_GDT G 5 G 5 4 8 13 0 4 5 6 8 8 9 9 9 11 12 14 18 19 20 22 23 24 27 29 LCS_GDT P 6 P 6 4 8 16 1 3 5 6 8 8 9 9 12 13 17 18 19 20 21 22 23 24 25 28 LCS_GDT W 7 W 7 4 8 16 0 3 5 6 8 8 9 9 10 13 15 18 19 20 21 22 23 24 24 26 LCS_GDT V 8 V 8 3 8 16 3 3 4 6 8 8 9 9 12 13 17 18 19 20 21 22 23 26 27 29 LCS_GDT G 9 G 9 3 8 16 3 3 4 6 8 8 9 9 12 13 17 18 19 20 21 22 23 26 27 29 LCS_GDT S 10 S 10 3 8 16 3 3 4 6 8 8 9 9 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT S 11 S 11 3 3 16 0 3 3 4 5 6 7 8 11 14 17 18 19 20 21 22 23 26 26 29 LCS_GDT Y 12 Y 12 3 3 16 0 3 5 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT V 13 V 13 3 8 16 3 4 5 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 26 28 LCS_GDT A 14 A 14 4 8 16 3 4 4 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT E 15 E 15 6 8 16 3 5 6 6 7 7 10 11 12 13 15 16 19 20 21 22 23 26 26 27 LCS_GDT T 16 T 16 6 8 16 3 5 6 6 7 7 8 10 12 13 15 16 19 20 21 22 23 26 26 27 LCS_GDT G 17 G 17 6 8 16 3 5 6 6 7 8 10 11 12 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT Q 18 Q 18 6 8 16 3 5 6 6 7 8 10 11 12 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT N 19 N 19 6 8 16 3 5 6 6 7 8 10 11 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT W 20 W 20 6 8 16 3 4 6 6 7 7 9 11 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT A 21 A 21 4 5 16 3 3 4 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT S 22 S 22 4 5 15 0 3 4 4 5 7 8 10 12 12 13 15 17 19 20 22 23 26 27 29 LCS_GDT L 23 L 23 3 5 15 0 3 3 3 5 7 7 8 10 11 12 15 16 19 20 21 23 26 26 27 LCS_GDT A 24 A 24 3 3 15 0 3 3 3 5 6 7 8 9 12 12 14 16 18 19 21 23 26 27 29 LCS_GDT A 25 A 25 3 4 15 3 3 3 4 4 6 7 8 10 12 12 13 16 18 20 21 23 24 27 29 LCS_GDT N 26 N 26 3 4 15 3 3 3 4 4 4 5 6 8 8 10 13 15 17 19 21 23 24 26 27 LCS_GDT E 27 E 27 3 5 15 3 3 3 4 4 5 8 9 9 11 12 14 16 18 19 21 23 24 26 27 LCS_GDT L 28 L 28 3 6 15 0 3 5 5 6 6 8 9 10 11 12 14 16 18 19 21 23 24 27 29 LCS_GDT R 29 R 29 4 6 15 3 4 5 5 6 6 8 9 10 11 12 14 16 18 19 21 23 24 27 29 LCS_GDT V 30 V 30 4 6 15 3 4 5 5 6 8 9 9 10 11 12 14 18 19 20 21 23 24 27 29 LCS_GDT T 31 T 31 4 7 15 3 4 5 5 6 8 9 9 10 11 12 14 15 19 20 21 23 24 27 29 LCS_GDT E 32 E 32 4 7 15 3 4 5 5 6 8 9 9 10 11 12 14 18 19 20 21 23 24 27 29 LCS_GDT R 33 R 33 4 7 15 3 3 5 5 7 8 9 9 11 12 13 14 18 19 20 21 23 24 27 29 LCS_GDT P 34 P 34 5 7 15 3 4 5 5 7 8 9 9 11 12 13 14 18 19 20 21 23 24 27 29 LCS_GDT F 35 F 35 5 7 15 3 4 5 5 7 8 9 9 11 12 13 14 18 19 20 21 23 24 27 29 LCS_GDT W 36 W 36 5 7 15 3 4 5 5 7 8 9 10 11 12 13 15 18 19 20 21 23 24 27 29 LCS_GDT I 37 I 37 5 7 15 3 4 5 5 7 8 9 10 11 12 13 15 18 19 20 21 23 26 27 29 LCS_GDT S 38 S 38 5 7 15 3 3 5 5 6 8 9 10 11 12 13 15 18 19 20 21 23 26 27 29 LCS_GDT S 39 S 39 3 4 15 3 3 4 5 5 7 8 10 12 12 13 15 16 19 20 21 23 26 27 29 LCS_GDT F 40 F 40 3 6 15 3 3 4 5 5 7 8 10 12 12 13 15 17 19 20 22 23 26 27 29 LCS_GDT I 41 I 41 4 6 15 3 4 5 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 27 29 LCS_GDT G 42 G 42 4 6 12 3 4 5 5 5 7 8 10 11 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT R 43 R 43 4 6 12 3 4 5 5 7 8 10 11 12 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT S 44 S 44 4 6 12 3 4 5 5 5 7 8 11 12 14 17 18 19 20 21 22 23 26 26 27 LCS_GDT K 45 K 45 4 6 12 2 3 5 5 5 7 8 9 10 12 12 14 17 19 21 22 23 26 26 27 LCS_AVERAGE LCS_A: 19.28 ( 9.25 14.72 33.88 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 5 6 6 8 8 10 11 12 14 17 18 19 20 21 22 23 26 27 29 GDT PERCENT_AT 6.82 11.36 13.64 13.64 18.18 18.18 22.73 25.00 27.27 31.82 38.64 40.91 43.18 45.45 47.73 50.00 52.27 59.09 61.36 65.91 GDT RMS_LOCAL 0.06 0.67 0.90 0.90 1.87 1.87 2.37 2.53 2.78 3.56 4.11 4.26 4.45 4.61 4.83 5.11 5.30 6.32 7.24 9.45 GDT RMS_ALL_AT 25.75 20.36 19.32 19.32 17.26 17.26 16.10 16.12 16.42 16.80 16.93 16.99 17.11 17.17 17.08 16.79 17.28 14.03 12.23 12.23 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 19.996 0 0.585 0.592 21.567 0.000 0.000 - LGA V 3 V 3 17.364 0 0.021 0.111 18.469 0.000 0.000 17.051 LGA Q 4 Q 4 15.970 0 0.702 1.550 20.152 0.000 0.000 20.152 LGA G 5 G 5 15.061 0 0.409 0.409 16.372 0.000 0.000 - LGA P 6 P 6 11.977 0 0.687 0.574 14.659 0.000 0.000 13.117 LGA W 7 W 7 12.486 0 0.396 0.348 17.346 0.000 0.000 17.035 LGA V 8 V 8 9.391 0 0.574 1.432 10.930 0.000 0.000 9.278 LGA G 9 G 9 8.676 0 0.350 0.350 8.978 0.000 0.000 - LGA S 10 S 10 8.857 0 0.614 0.636 9.990 0.000 0.000 9.990 LGA S 11 S 11 7.499 0 0.581 0.769 8.117 0.000 0.000 8.117 LGA Y 12 Y 12 3.234 0 0.620 0.839 9.037 13.182 16.061 9.037 LGA V 13 V 13 1.130 0 0.602 0.566 3.599 48.182 62.857 1.488 LGA A 14 A 14 2.815 0 0.578 0.573 5.475 38.636 30.909 - LGA E 15 E 15 3.896 0 0.092 1.541 5.994 12.727 7.475 4.089 LGA T 16 T 16 5.018 0 0.095 0.114 7.263 3.182 1.818 5.279 LGA G 17 G 17 2.695 0 0.217 0.217 3.217 33.636 33.636 - LGA Q 18 Q 18 1.917 0 0.033 1.201 2.921 44.545 49.697 1.515 LGA N 19 N 19 2.033 0 0.651 1.525 4.238 31.818 27.045 4.238 LGA W 20 W 20 3.523 0 0.184 0.835 15.457 19.545 5.584 15.457 LGA A 21 A 21 1.968 0 0.586 0.578 4.394 28.182 35.636 - LGA S 22 S 22 8.358 0 0.601 0.793 11.925 0.000 0.000 11.925 LGA L 23 L 23 12.506 0 0.586 0.582 14.723 0.000 0.000 13.524 LGA A 24 A 24 13.914 0 0.587 0.574 13.914 0.000 0.000 - LGA A 25 A 25 15.038 0 0.553 0.567 17.773 0.000 0.000 - LGA N 26 N 26 21.830 0 0.075 0.354 24.312 0.000 0.000 21.997 LGA E 27 E 27 24.415 0 0.660 1.147 30.286 0.000 0.000 30.286 LGA L 28 L 28 22.815 0 0.649 1.113 25.378 0.000 0.000 20.520 LGA R 29 R 29 28.853 0 0.556 1.481 33.776 0.000 0.000 32.197 LGA V 30 V 30 28.642 0 0.110 1.038 31.508 0.000 0.000 27.073 LGA T 31 T 31 34.628 0 0.404 0.338 36.153 0.000 0.000 35.227 LGA E 32 E 32 34.922 0 0.286 1.182 40.120 0.000 0.000 40.120 LGA R 33 R 33 31.527 0 0.538 1.418 34.392 0.000 0.000 32.765 LGA P 34 P 34 27.731 0 0.048 0.076 31.671 0.000 0.000 30.376 LGA F 35 F 35 22.606 0 0.022 1.179 24.150 0.000 0.000 20.424 LGA W 36 W 36 18.328 0 0.083 1.229 23.915 0.000 0.000 21.923 LGA I 37 I 37 13.060 0 0.641 1.264 14.752 0.000 0.000 11.571 LGA S 38 S 38 11.971 0 0.127 0.588 13.528 0.000 0.000 13.528 LGA S 39 S 39 11.527 0 0.679 0.784 13.206 0.000 0.000 13.108 LGA F 40 F 40 7.254 0 0.647 0.957 8.614 0.455 0.165 6.559 LGA I 41 I 41 1.128 0 0.056 0.088 4.702 28.182 26.591 4.241 LGA G 42 G 42 5.818 0 0.056 0.056 6.993 2.727 2.727 - LGA R 43 R 43 1.726 0 0.028 0.988 9.484 27.727 13.719 8.430 LGA S 44 S 44 5.103 0 0.049 0.642 7.421 7.273 4.848 7.421 LGA K 45 K 45 8.995 0 0.653 1.046 18.752 0.000 0.000 18.752 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.612 10.530 12.003 7.727 7.245 3.792 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.53 25.000 23.068 0.418 LGA_LOCAL RMSD: 2.531 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.123 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.612 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.931375 * X + 0.079305 * Y + -0.355318 * Z + 12.143234 Y_new = 0.099558 * X + -0.883301 * Y + -0.458113 * Z + -12.131281 Z_new = -0.350183 * X + -0.462050 * Y + 0.814789 * Z + -8.259784 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.035104 0.357766 -0.515861 [DEG: 173.8986 20.4985 -29.5567 ] ZXZ: -0.659691 0.618431 -2.493061 [DEG: -37.7975 35.4335 -142.8419 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: S0953s2TS492_1-D1 REMARK 2: S0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap S0953s2TS492_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.53 23.068 10.61 REMARK ---------------------------------------------------------- MOLECULE S0953s2TS492_1-D1 PFRMAT TS TARGET S0953s2 MODEL 1 REFINED PARENT N/A ATOM 525 N ALA 2 -5.588 43.135 5.475 1.00 9.09 ATOM 526 CA ALA 2 -5.838 42.891 4.045 1.00 9.09 ATOM 527 C ALA 2 -4.955 43.782 3.145 1.00 9.09 ATOM 528 O ALA 2 -4.306 43.278 2.231 1.00 9.09 ATOM 529 CB ALA 2 -7.330 43.102 3.759 1.00 9.45 ATOM 530 N VAL 3 -4.894 45.089 3.444 1.00 7.81 ATOM 531 CA VAL 3 -4.030 46.110 2.810 1.00 7.81 ATOM 532 C VAL 3 -3.530 47.088 3.883 1.00 7.81 ATOM 533 O VAL 3 -4.331 47.586 4.676 1.00 7.81 ATOM 534 CB VAL 3 -4.763 46.858 1.670 1.00 8.23 ATOM 535 CG1 VAL 3 -3.938 48.028 1.109 1.00 8.23 ATOM 536 CG2 VAL 3 -5.077 45.939 0.482 1.00 8.23 ATOM 537 N GLN 4 -2.218 47.369 3.910 1.00 8.07 ATOM 538 CA GLN 4 -1.576 48.233 4.923 1.00 8.07 ATOM 539 C GLN 4 -0.918 49.511 4.348 1.00 8.07 ATOM 540 O GLN 4 -0.629 50.449 5.093 1.00 8.07 ATOM 541 CB GLN 4 -0.573 47.361 5.709 1.00 8.73 ATOM 542 CG GLN 4 -0.014 47.995 6.995 1.00 8.73 ATOM 543 CD GLN 4 -1.100 48.402 7.994 1.00 8.73 ATOM 544 OE1 GLN 4 -2.041 47.672 8.278 1.00 8.73 ATOM 545 NE2 GLN 4 -1.021 49.585 8.570 1.00 8.73 ATOM 546 N GLY 5 -0.681 49.559 3.032 1.00 8.38 ATOM 547 CA GLY 5 0.059 50.621 2.333 1.00 8.38 ATOM 548 C GLY 5 0.896 50.009 1.201 1.00 8.38 ATOM 549 O GLY 5 0.412 49.952 0.065 1.00 8.38 ATOM 550 N PRO 6 2.115 49.508 1.492 1.00 6.68 ATOM 551 CA PRO 6 2.887 48.685 0.558 1.00 6.68 ATOM 552 C PRO 6 2.192 47.329 0.293 1.00 6.68 ATOM 553 O PRO 6 1.214 46.965 0.957 1.00 6.68 ATOM 554 CB PRO 6 4.271 48.548 1.198 1.00 6.70 ATOM 555 CG PRO 6 3.973 48.617 2.695 1.00 6.70 ATOM 556 CD PRO 6 2.818 49.615 2.765 1.00 6.70 ATOM 557 N TRP 7 2.675 46.592 -0.713 1.00 5.83 ATOM 558 CA TRP 7 2.001 45.410 -1.275 1.00 5.83 ATOM 559 C TRP 7 1.795 44.208 -0.329 1.00 5.83 ATOM 560 O TRP 7 2.456 44.046 0.700 1.00 5.83 ATOM 561 CB TRP 7 2.655 45.039 -2.611 1.00 7.63 ATOM 562 CG TRP 7 2.429 46.078 -3.670 1.00 7.63 ATOM 563 CD1 TRP 7 3.352 46.937 -4.161 1.00 7.63 ATOM 564 CD2 TRP 7 1.172 46.420 -4.334 1.00 7.63 ATOM 565 NE1 TRP 7 2.752 47.791 -5.070 1.00 7.63 ATOM 566 CE2 TRP 7 1.405 47.527 -5.204 1.00 7.63 ATOM 567 CE3 TRP 7 -0.150 45.921 -4.270 1.00 7.63 ATOM 568 CZ2 TRP 7 0.381 48.115 -5.963 1.00 7.63 ATOM 569 CZ3 TRP 7 -1.185 46.503 -5.029 1.00 7.63 ATOM 570 CH2 TRP 7 -0.924 47.599 -5.872 1.00 7.63 ATOM 571 N VAL 8 0.827 43.360 -0.703 1.00 5.96 ATOM 572 CA VAL 8 0.218 42.304 0.134 1.00 5.96 ATOM 573 C VAL 8 -0.002 40.970 -0.610 1.00 5.96 ATOM 574 O VAL 8 0.546 40.752 -1.692 1.00 5.96 ATOM 575 CB VAL 8 -1.110 42.851 0.712 1.00 6.68 ATOM 576 CG1 VAL 8 -0.897 44.113 1.556 1.00 6.68 ATOM 577 CG2 VAL 8 -2.141 43.148 -0.391 1.00 6.68 ATOM 578 N GLY 9 -0.804 40.068 -0.020 1.00 7.57 ATOM 579 CA GLY 9 -1.048 38.691 -0.485 1.00 7.57 ATOM 580 C GLY 9 -0.192 37.638 0.237 1.00 7.57 ATOM 581 O GLY 9 -0.204 36.464 -0.149 1.00 7.57 ATOM 582 N SER 10 0.549 38.059 1.266 1.00 7.19 ATOM 583 CA SER 10 1.602 37.299 1.943 1.00 7.19 ATOM 584 C SER 10 1.098 36.474 3.135 1.00 7.19 ATOM 585 O SER 10 0.539 37.016 4.088 1.00 7.19 ATOM 586 CB SER 10 2.702 38.268 2.387 1.00 6.84 ATOM 587 OG SER 10 3.075 39.135 1.319 1.00 6.84 ATOM 588 N SER 11 1.304 35.159 3.081 1.00 8.18 ATOM 589 CA SER 11 0.824 34.145 4.043 1.00 8.18 ATOM 590 C SER 11 1.580 34.155 5.389 1.00 8.18 ATOM 591 O SER 11 2.689 34.676 5.461 1.00 8.18 ATOM 592 CB SER 11 0.974 32.767 3.385 1.00 8.62 ATOM 593 OG SER 11 2.343 32.425 3.251 1.00 8.62 ATOM 594 N TYR 12 1.043 33.517 6.446 1.00 7.89 ATOM 595 CA TYR 12 1.723 33.378 7.752 1.00 7.89 ATOM 596 C TYR 12 1.726 31.934 8.289 1.00 7.89 ATOM 597 O TYR 12 0.678 31.306 8.432 1.00 7.89 ATOM 598 CB TYR 12 1.113 34.348 8.770 1.00 9.06 ATOM 599 CG TYR 12 1.796 34.359 10.133 1.00 9.06 ATOM 600 CD1 TYR 12 2.596 35.456 10.512 1.00 9.06 ATOM 601 CD2 TYR 12 1.601 33.299 11.045 1.00 9.06 ATOM 602 CE1 TYR 12 3.164 35.505 11.801 1.00 9.06 ATOM 603 CE2 TYR 12 2.175 33.340 12.327 1.00 9.06 ATOM 604 CZ TYR 12 2.946 34.453 12.717 1.00 9.06 ATOM 605 OH TYR 12 3.449 34.512 13.984 1.00 9.06 ATOM 606 N VAL 13 2.912 31.419 8.630 1.00 8.42 ATOM 607 CA VAL 13 3.178 30.120 9.284 1.00 8.42 ATOM 608 C VAL 13 4.346 30.285 10.274 1.00 8.42 ATOM 609 O VAL 13 5.292 31.019 9.983 1.00 8.42 ATOM 610 CB VAL 13 3.480 29.011 8.246 1.00 8.35 ATOM 611 CG1 VAL 13 3.938 27.690 8.885 1.00 8.35 ATOM 612 CG2 VAL 13 2.252 28.671 7.387 1.00 8.35 ATOM 613 N ALA 14 4.301 29.606 11.428 1.00 10.73 ATOM 614 CA ALA 14 5.311 29.717 12.490 1.00 10.73 ATOM 615 C ALA 14 5.788 28.362 13.055 1.00 10.73 ATOM 616 O ALA 14 5.113 27.335 12.948 1.00 10.73 ATOM 617 CB ALA 14 4.771 30.651 13.581 1.00 11.22 ATOM 618 N GLU 15 6.967 28.381 13.684 1.00 12.59 ATOM 619 CA GLU 15 7.761 27.217 14.121 1.00 12.59 ATOM 620 C GLU 15 7.096 26.334 15.191 1.00 12.59 ATOM 621 O GLU 15 7.456 25.166 15.333 1.00 12.59 ATOM 622 CB GLU 15 9.136 27.689 14.641 1.00 12.25 ATOM 623 CG GLU 15 10.082 28.240 13.562 1.00 12.25 ATOM 624 CD GLU 15 9.545 29.489 12.837 1.00 12.25 ATOM 625 OE1 GLU 15 8.971 30.386 13.504 1.00 12.25 ATOM 626 OE2 GLU 15 9.644 29.528 11.591 1.00 12.25 ATOM 627 N THR 16 6.101 26.851 15.916 1.00 13.36 ATOM 628 CA THR 16 5.272 26.075 16.862 1.00 13.36 ATOM 629 C THR 16 4.240 25.165 16.167 1.00 13.36 ATOM 630 O THR 16 3.466 24.482 16.844 1.00 13.36 ATOM 631 CB THR 16 4.591 27.005 17.880 1.00 12.61 ATOM 632 OG1 THR 16 3.807 27.975 17.211 1.00 12.61 ATOM 633 CG2 THR 16 5.618 27.730 18.755 1.00 12.61 ATOM 634 N GLY 17 4.238 25.107 14.827 1.00 14.01 ATOM 635 CA GLY 17 3.378 24.226 14.026 1.00 14.01 ATOM 636 C GLY 17 1.983 24.812 13.782 1.00 14.01 ATOM 637 O GLY 17 0.981 24.115 13.945 1.00 14.01 ATOM 638 N GLN 18 1.918 26.103 13.428 1.00 12.19 ATOM 639 CA GLN 18 0.677 26.885 13.351 1.00 12.19 ATOM 640 C GLN 18 0.634 27.788 12.104 1.00 12.19 ATOM 641 O GLN 18 1.657 28.325 11.684 1.00 12.19 ATOM 642 CB GLN 18 0.534 27.686 14.664 1.00 12.10 ATOM 643 CG GLN 18 -0.775 28.485 14.800 1.00 12.10 ATOM 644 CD GLN 18 -2.030 27.610 14.805 1.00 12.10 ATOM 645 OE1 GLN 18 -2.139 26.630 15.531 1.00 12.10 ATOM 646 NE2 GLN 18 -3.025 27.914 13.996 1.00 12.10 ATOM 647 N ASN 19 -0.563 27.975 11.534 1.00 11.39 ATOM 648 CA ASN 19 -0.850 28.903 10.428 1.00 11.39 ATOM 649 C ASN 19 -1.761 30.060 10.895 1.00 11.39 ATOM 650 O ASN 19 -2.683 29.828 11.684 1.00 11.39 ATOM 651 CB ASN 19 -1.454 28.114 9.246 1.00 12.83 ATOM 652 CG ASN 19 -2.854 27.572 9.517 1.00 12.83 ATOM 653 OD1 ASN 19 -3.858 28.196 9.203 1.00 12.83 ATOM 654 ND2 ASN 19 -2.975 26.398 10.101 1.00 12.83 ATOM 655 N TRP 20 -1.509 31.286 10.417 1.00 9.20 ATOM 656 CA TRP 20 -2.377 32.476 10.576 1.00 9.20 ATOM 657 C TRP 20 -2.730 33.064 9.183 1.00 9.20 ATOM 658 O TRP 20 -2.256 32.584 8.149 1.00 9.20 ATOM 659 CB TRP 20 -1.755 33.578 11.478 1.00 8.06 ATOM 660 CG TRP 20 -1.261 33.325 12.884 1.00 8.06 ATOM 661 CD1 TRP 20 -1.230 32.159 13.571 1.00 8.06 ATOM 662 CD2 TRP 20 -0.733 34.323 13.822 1.00 8.06 ATOM 663 NE1 TRP 20 -0.700 32.351 14.830 1.00 8.06 ATOM 664 CE2 TRP 20 -0.393 33.674 15.049 1.00 8.06 ATOM 665 CE3 TRP 20 -0.528 35.720 13.770 1.00 8.06 ATOM 666 CZ2 TRP 20 0.119 34.362 16.159 1.00 8.06 ATOM 667 CZ3 TRP 20 -0.018 36.426 14.880 1.00 8.06 ATOM 668 CH2 TRP 20 0.304 35.752 16.072 1.00 8.06 ATOM 669 N ALA 21 -3.572 34.103 9.143 1.00 8.78 ATOM 670 CA ALA 21 -4.045 34.756 7.913 1.00 8.78 ATOM 671 C ALA 21 -2.996 35.657 7.207 1.00 8.78 ATOM 672 O ALA 21 -1.892 35.885 7.706 1.00 8.78 ATOM 673 CB ALA 21 -5.318 35.537 8.271 1.00 9.27 ATOM 674 N SER 22 -3.363 36.176 6.027 1.00 7.05 ATOM 675 CA SER 22 -2.536 37.053 5.178 1.00 7.05 ATOM 676 C SER 22 -2.218 38.420 5.822 1.00 7.05 ATOM 677 O SER 22 -3.072 39.000 6.499 1.00 7.05 ATOM 678 CB SER 22 -3.242 37.248 3.830 1.00 7.41 ATOM 679 OG SER 22 -2.465 38.012 2.921 1.00 7.41 ATOM 680 N LEU 23 -1.003 38.940 5.592 1.00 5.37 ATOM 681 CA LEU 23 -0.485 40.238 6.069 1.00 5.37 ATOM 682 C LEU 23 0.296 40.984 4.949 1.00 5.37 ATOM 683 O LEU 23 0.355 40.529 3.802 1.00 5.37 ATOM 684 CB LEU 23 0.385 40.045 7.339 1.00 4.71 ATOM 685 CG LEU 23 -0.172 39.198 8.499 1.00 4.71 ATOM 686 CD1 LEU 23 0.948 38.919 9.501 1.00 4.71 ATOM 687 CD2 LEU 23 -1.291 39.914 9.256 1.00 4.71 ATOM 688 N ALA 24 0.889 42.144 5.267 1.00 6.17 ATOM 689 CA ALA 24 1.621 43.003 4.322 1.00 6.17 ATOM 690 C ALA 24 3.152 42.789 4.299 1.00 6.17 ATOM 691 O ALA 24 3.757 42.377 5.292 1.00 6.17 ATOM 692 CB ALA 24 1.270 44.464 4.631 1.00 6.54 ATOM 693 N ALA 25 3.782 43.127 3.168 1.00 6.81 ATOM 694 CA ALA 25 5.225 43.036 2.914 1.00 6.81 ATOM 695 C ALA 25 5.817 44.351 2.364 1.00 6.81 ATOM 696 O ALA 25 5.090 45.290 2.039 1.00 6.81 ATOM 697 CB ALA 25 5.467 41.870 1.948 1.00 6.99 ATOM 698 N ASN 26 7.151 44.421 2.270 1.00 9.47 ATOM 699 CA ASN 26 7.869 45.617 1.816 1.00 9.47 ATOM 700 C ASN 26 7.907 45.764 0.279 1.00 9.47 ATOM 701 O ASN 26 7.503 46.803 -0.242 1.00 9.47 ATOM 702 CB ASN 26 9.269 45.625 2.459 1.00 10.06 ATOM 703 CG ASN 26 9.194 45.859 3.965 1.00 10.06 ATOM 704 OD1 ASN 26 8.614 46.827 4.435 1.00 10.06 ATOM 705 ND2 ASN 26 9.764 44.999 4.782 1.00 10.06 ATOM 706 N GLU 27 8.358 44.735 -0.452 1.00 10.40 ATOM 707 CA GLU 27 8.460 44.723 -1.928 1.00 10.40 ATOM 708 C GLU 27 8.186 43.313 -2.485 1.00 10.40 ATOM 709 O GLU 27 8.553 42.320 -1.850 1.00 10.40 ATOM 710 CB GLU 27 9.860 45.173 -2.408 1.00 11.73 ATOM 711 CG GLU 27 10.440 46.475 -1.825 1.00 11.73 ATOM 712 CD GLU 27 9.691 47.765 -2.229 1.00 11.73 ATOM 713 OE1 GLU 27 8.954 47.779 -3.247 1.00 11.73 ATOM 714 OE2 GLU 27 9.898 48.807 -1.559 1.00 11.73 ATOM 715 N LEU 28 7.599 43.215 -3.686 1.00 8.96 ATOM 716 CA LEU 28 7.329 41.946 -4.386 1.00 8.96 ATOM 717 C LEU 28 7.730 41.982 -5.871 1.00 8.96 ATOM 718 O LEU 28 7.857 43.060 -6.462 1.00 8.96 ATOM 719 CB LEU 28 5.865 41.506 -4.153 1.00 8.74 ATOM 720 CG LEU 28 4.704 42.354 -4.721 1.00 8.74 ATOM 721 CD1 LEU 28 4.549 42.288 -6.244 1.00 8.74 ATOM 722 CD2 LEU 28 3.394 41.818 -4.135 1.00 8.74 ATOM 723 N ARG 29 7.909 40.798 -6.477 1.00 9.36 ATOM 724 CA ARG 29 8.145 40.619 -7.924 1.00 9.36 ATOM 725 C ARG 29 7.575 39.289 -8.441 1.00 9.36 ATOM 726 O ARG 29 7.425 38.329 -7.684 1.00 9.36 ATOM 727 CB ARG 29 9.655 40.786 -8.222 1.00 10.54 ATOM 728 CG ARG 29 9.922 41.261 -9.663 1.00 10.54 ATOM 729 CD ARG 29 11.364 41.746 -9.885 1.00 10.54 ATOM 730 NE ARG 29 12.270 40.679 -10.365 1.00 10.54 ATOM 731 CZ ARG 29 13.540 40.838 -10.703 1.00 10.54 ATOM 732 NH1 ARG 29 14.226 39.850 -11.203 1.00 10.54 ATOM 733 NH2 ARG 29 14.159 41.976 -10.556 1.00 10.54 ATOM 734 N VAL 30 7.259 39.247 -9.738 1.00 8.77 ATOM 735 CA VAL 30 6.689 38.101 -10.475 1.00 8.77 ATOM 736 C VAL 30 7.542 37.797 -11.716 1.00 8.77 ATOM 737 O VAL 30 8.004 38.719 -12.392 1.00 8.77 ATOM 738 CB VAL 30 5.196 38.352 -10.794 1.00 9.06 ATOM 739 CG1 VAL 30 4.949 39.608 -11.645 1.00 9.06 ATOM 740 CG2 VAL 30 4.537 37.166 -11.505 1.00 9.06 ATOM 741 N THR 31 7.781 36.515 -12.004 1.00 8.75 ATOM 742 CA THR 31 8.761 36.050 -13.011 1.00 8.75 ATOM 743 C THR 31 8.214 34.892 -13.862 1.00 8.75 ATOM 744 O THR 31 8.691 33.759 -13.792 1.00 8.75 ATOM 745 CB THR 31 10.122 35.721 -12.350 1.00 8.37 ATOM 746 OG1 THR 31 10.005 34.862 -11.228 1.00 8.37 ATOM 747 CG2 THR 31 10.837 36.979 -11.849 1.00 8.37 ATOM 748 N GLU 32 7.195 35.197 -14.680 1.00 9.46 ATOM 749 CA GLU 32 6.438 34.259 -15.533 1.00 9.46 ATOM 750 C GLU 32 5.841 33.086 -14.723 1.00 9.46 ATOM 751 O GLU 32 6.400 31.988 -14.679 1.00 9.46 ATOM 752 CB GLU 32 7.264 33.841 -16.770 1.00 10.14 ATOM 753 CG GLU 32 6.429 33.052 -17.796 1.00 10.14 ATOM 754 CD GLU 32 7.200 32.718 -19.093 1.00 10.14 ATOM 755 OE1 GLU 32 8.082 33.501 -19.528 1.00 10.14 ATOM 756 OE2 GLU 32 6.905 31.668 -19.716 1.00 10.14 ATOM 757 N ARG 33 4.681 33.357 -14.099 1.00 9.06 ATOM 758 CA ARG 33 3.942 32.565 -13.089 1.00 9.06 ATOM 759 C ARG 33 4.440 32.703 -11.628 1.00 9.06 ATOM 760 O ARG 33 3.749 33.420 -10.901 1.00 9.06 ATOM 761 CB ARG 33 3.576 31.145 -13.572 1.00 10.77 ATOM 762 CG ARG 33 2.454 31.152 -14.622 1.00 10.77 ATOM 763 CD ARG 33 2.341 29.775 -15.286 1.00 10.77 ATOM 764 NE ARG 33 1.164 29.678 -16.170 1.00 10.77 ATOM 765 CZ ARG 33 -0.040 29.240 -15.841 1.00 10.77 ATOM 766 NH1 ARG 33 -0.962 29.122 -16.756 1.00 10.77 ATOM 767 NH2 ARG 33 -0.366 28.912 -14.622 1.00 10.77 ATOM 768 N PRO 34 5.549 32.101 -11.141 1.00 7.19 ATOM 769 CA PRO 34 5.973 32.248 -9.737 1.00 7.19 ATOM 770 C PRO 34 6.294 33.684 -9.273 1.00 7.19 ATOM 771 O PRO 34 6.575 34.578 -10.079 1.00 7.19 ATOM 772 CB PRO 34 7.192 31.338 -9.570 1.00 8.04 ATOM 773 CG PRO 34 6.952 30.253 -10.611 1.00 8.04 ATOM 774 CD PRO 34 6.357 31.059 -11.762 1.00 8.04 ATOM 775 N PHE 35 6.293 33.878 -7.950 1.00 5.11 ATOM 776 CA PHE 35 6.502 35.152 -7.251 1.00 5.11 ATOM 777 C PHE 35 7.561 35.030 -6.137 1.00 5.11 ATOM 778 O PHE 35 7.807 33.940 -5.606 1.00 5.11 ATOM 779 CB PHE 35 5.202 35.655 -6.592 1.00 5.22 ATOM 780 CG PHE 35 3.927 35.766 -7.418 1.00 5.22 ATOM 781 CD1 PHE 35 3.244 34.611 -7.851 1.00 5.22 ATOM 782 CD2 PHE 35 3.336 37.029 -7.626 1.00 5.22 ATOM 783 CE1 PHE 35 1.993 34.714 -8.483 1.00 5.22 ATOM 784 CE2 PHE 35 2.082 37.134 -8.255 1.00 5.22 ATOM 785 CZ PHE 35 1.408 35.976 -8.683 1.00 5.22 ATOM 786 N TRP 36 8.124 36.167 -5.717 1.00 4.31 ATOM 787 CA TRP 36 8.986 36.272 -4.531 1.00 4.31 ATOM 788 C TRP 36 8.904 37.650 -3.854 1.00 4.31 ATOM 789 O TRP 36 8.598 38.661 -4.493 1.00 4.31 ATOM 790 CB TRP 36 10.423 35.871 -4.886 1.00 4.15 ATOM 791 CG TRP 36 11.139 36.730 -5.882 1.00 4.15 ATOM 792 CD1 TRP 36 11.028 36.625 -7.226 1.00 4.15 ATOM 793 CD2 TRP 36 12.088 37.815 -5.641 1.00 4.15 ATOM 794 NE1 TRP 36 11.848 37.553 -7.835 1.00 4.15 ATOM 795 CE2 TRP 36 12.527 38.315 -6.906 1.00 4.15 ATOM 796 CE3 TRP 36 12.651 38.405 -4.486 1.00 4.15 ATOM 797 CZ2 TRP 36 13.467 39.349 -7.020 1.00 4.15 ATOM 798 CZ3 TRP 36 13.600 39.441 -4.591 1.00 4.15 ATOM 799 CH2 TRP 36 14.007 39.916 -5.852 1.00 4.15 ATOM 800 N ILE 37 9.142 37.666 -2.539 1.00 5.12 ATOM 801 CA ILE 37 8.956 38.811 -1.637 1.00 5.12 ATOM 802 C ILE 37 10.299 39.199 -0.995 1.00 5.12 ATOM 803 O ILE 37 10.992 38.339 -0.451 1.00 5.12 ATOM 804 CB ILE 37 7.910 38.465 -0.548 1.00 5.69 ATOM 805 CG1 ILE 37 6.586 37.859 -1.073 1.00 5.69 ATOM 806 CG2 ILE 37 7.618 39.692 0.328 1.00 5.69 ATOM 807 CD1 ILE 37 5.792 38.743 -2.037 1.00 5.69 ATOM 808 N SER 38 10.659 40.488 -1.017 1.00 6.25 ATOM 809 CA SER 38 11.946 40.986 -0.489 1.00 6.25 ATOM 810 C SER 38 12.077 40.834 1.037 1.00 6.25 ATOM 811 O SER 38 13.109 40.390 1.546 1.00 6.25 ATOM 812 CB SER 38 12.107 42.463 -0.875 1.00 6.96 ATOM 813 OG SER 38 13.287 43.022 -0.318 1.00 6.96 ATOM 814 N SER 39 11.025 41.211 1.774 1.00 5.28 ATOM 815 CA SER 39 10.941 41.149 3.240 1.00 5.28 ATOM 816 C SER 39 9.478 41.307 3.669 1.00 5.28 ATOM 817 O SER 39 8.742 42.107 3.087 1.00 5.28 ATOM 818 CB SER 39 11.836 42.238 3.850 1.00 5.79 ATOM 819 OG SER 39 11.647 42.383 5.248 1.00 5.79 ATOM 820 N PHE 40 9.050 40.533 4.662 1.00 5.18 ATOM 821 CA PHE 40 7.659 40.357 5.082 1.00 5.18 ATOM 822 C PHE 40 7.543 40.425 6.626 1.00 5.18 ATOM 823 O PHE 40 8.462 40.037 7.348 1.00 5.18 ATOM 824 CB PHE 40 7.160 39.053 4.424 1.00 5.48 ATOM 825 CG PHE 40 5.882 38.480 4.980 1.00 5.48 ATOM 826 CD1 PHE 40 4.708 39.245 4.975 1.00 5.48 ATOM 827 CD2 PHE 40 5.863 37.182 5.513 1.00 5.48 ATOM 828 CE1 PHE 40 3.544 38.743 5.565 1.00 5.48 ATOM 829 CE2 PHE 40 4.720 36.708 6.175 1.00 5.48 ATOM 830 CZ PHE 40 3.554 37.492 6.205 1.00 5.48 ATOM 831 N ILE 41 6.442 40.979 7.153 1.00 5.99 ATOM 832 CA ILE 41 6.299 41.348 8.579 1.00 5.99 ATOM 833 C ILE 41 5.028 40.737 9.198 1.00 5.99 ATOM 834 O ILE 41 3.975 40.699 8.559 1.00 5.99 ATOM 835 CB ILE 41 6.358 42.895 8.717 1.00 7.31 ATOM 836 CG1 ILE 41 7.769 43.422 8.345 1.00 7.31 ATOM 837 CG2 ILE 41 5.979 43.379 10.132 1.00 7.31 ATOM 838 CD1 ILE 41 7.853 44.943 8.159 1.00 7.31 ATOM 839 N GLY 42 5.117 40.290 10.461 1.00 5.38 ATOM 840 CA GLY 42 3.966 39.716 11.181 1.00 5.38 ATOM 841 C GLY 42 4.113 39.427 12.686 1.00 5.38 ATOM 842 O GLY 42 3.158 38.930 13.286 1.00 5.38 ATOM 843 N ARG 43 5.267 39.716 13.310 1.00 5.14 ATOM 844 CA ARG 43 5.554 39.453 14.740 1.00 5.14 ATOM 845 C ARG 43 6.232 40.651 15.418 1.00 5.14 ATOM 846 O ARG 43 6.789 41.523 14.752 1.00 5.14 ATOM 847 CB ARG 43 6.436 38.194 14.874 1.00 5.30 ATOM 848 CG ARG 43 5.727 36.895 14.463 1.00 5.30 ATOM 849 CD ARG 43 6.646 35.668 14.556 1.00 5.30 ATOM 850 NE ARG 43 7.081 35.391 15.938 1.00 5.30 ATOM 851 CZ ARG 43 6.512 34.626 16.845 1.00 5.30 ATOM 852 NH1 ARG 43 7.119 34.479 17.982 1.00 5.30 ATOM 853 NH2 ARG 43 5.373 34.021 16.651 1.00 5.30 ATOM 854 N SER 44 6.204 40.683 16.752 1.00 7.40 ATOM 855 CA SER 44 7.007 41.619 17.555 1.00 7.40 ATOM 856 C SER 44 8.419 41.050 17.770 1.00 7.40 ATOM 857 O SER 44 8.571 39.855 18.038 1.00 7.40 ATOM 858 CB SER 44 6.312 41.927 18.886 1.00 7.79 ATOM 859 OG SER 44 7.048 42.903 19.608 1.00 7.79 ATOM 860 N LYS 45 9.452 41.894 17.619 1.00 9.37 ATOM 861 CA LYS 45 10.893 41.541 17.661 1.00 9.37 ATOM 862 C LYS 45 11.357 40.509 16.603 1.00 9.37 ATOM 863 O LYS 45 12.481 40.016 16.685 1.00 9.37 ATOM 864 CB LYS 45 11.326 41.129 19.092 1.00 11.40 ATOM 865 CG LYS 45 10.770 41.951 20.272 1.00 11.40 ATOM 866 CD LYS 45 11.130 43.445 20.240 1.00 11.40 ATOM 867 CE LYS 45 10.570 44.124 21.499 1.00 11.40 ATOM 868 NZ LYS 45 10.895 45.575 21.544 1.00 11.40 TER END