#######################################################
# #
# LGA #
# --------------- #
# #
# Local-Global Alignment #
# A Method for Finding 3-D Similarities #
# in Protein Structures #
# #
# ------------ 09/2011 #
# #
# Adam Zemla (adamz@llnl.gov) #
# Lawrence Livermore National Laboratory, CA #
# #
#######################################################
# Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS007_1-D1
# Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb
# PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_1-D1.lga
# FIXED Atom-Atom correspondence
# GDT and LCS analysis
LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 12 2 - 13 4.47 56.09
LONGEST_CONTINUOUS_SEGMENT: 12 3 - 14 4.98 54.85
LONGEST_CONTINUOUS_SEGMENT: 12 32 - 43 4.91 54.23
LONGEST_CONTINUOUS_SEGMENT: 12 33 - 44 4.87 56.08
LCS_AVERAGE: 25.93
LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 7 27 - 33 1.99 35.33
LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.76 37.16
LCS_AVERAGE: 12.96
LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.50 52.72
LONGEST_CONTINUOUS_SEGMENT: 4 3 - 6 0.93 53.70
LONGEST_CONTINUOUS_SEGMENT: 4 4 - 7 0.55 66.94
LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.69 46.91
LONGEST_CONTINUOUS_SEGMENT: 4 17 - 20 0.64 35.29
LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.95 32.87
LONGEST_CONTINUOUS_SEGMENT: 4 31 - 34 0.68 47.05
LONGEST_CONTINUOUS_SEGMENT: 4 33 - 36 1.00 47.82
LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.71 53.07
LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.35 66.29
LCS_AVERAGE: 8.16
LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44
LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0
LCS_GDT A 2 A 2 4 6 12 3 4 4 5 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT V 3 V 3 4 6 12 3 4 4 5 5 6 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT Q 4 Q 4 4 6 12 3 4 4 5 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT G 5 G 5 4 6 12 3 4 4 5 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT P 6 P 6 4 6 12 3 4 4 5 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT W 7 W 7 4 6 12 3 4 4 4 5 6 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT V 8 V 8 4 5 12 3 4 4 4 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT G 9 G 9 4 5 12 3 4 4 5 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT S 10 S 10 3 4 12 3 3 3 3 5 7 9 9 9 9 9 11 11 12 12 13 13 13 15 16
LCS_GDT S 11 S 11 3 4 12 3 3 3 3 3 4 4 5 7 8 9 11 11 12 12 13 13 13 15 16
LCS_GDT Y 12 Y 12 3 4 12 3 3 3 3 3 4 4 5 6 8 9 9 11 12 12 13 13 13 15 16
LCS_GDT V 13 V 13 3 4 12 3 3 3 3 4 4 4 5 6 8 9 11 11 12 12 13 13 13 15 16
LCS_GDT A 14 A 14 3 6 12 3 3 3 3 6 6 7 7 7 7 8 9 10 10 11 13 13 13 15 16
LCS_GDT E 15 E 15 3 6 10 3 3 3 5 6 6 7 7 7 7 8 9 9 9 10 12 13 13 14 16
LCS_GDT T 16 T 16 3 6 9 3 3 3 5 6 6 7 7 7 7 8 9 9 10 11 12 13 13 15 16
LCS_GDT G 17 G 17 4 6 9 3 4 4 5 6 6 7 7 7 7 8 9 9 9 10 12 13 13 15 16
LCS_GDT Q 18 Q 18 4 6 9 3 4 4 5 6 6 7 7 7 7 8 9 9 9 10 10 12 13 14 16
LCS_GDT N 19 N 19 4 6 11 3 4 4 5 6 6 7 7 7 7 9 10 10 11 11 11 11 12 12 13
LCS_GDT W 20 W 20 4 6 11 3 4 4 5 6 6 7 7 7 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT A 21 A 21 4 6 11 3 3 4 5 6 6 6 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT S 22 S 22 4 6 11 3 3 4 4 6 6 6 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT L 23 L 23 3 4 11 3 3 3 3 4 4 5 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT A 24 A 24 3 4 11 3 3 3 3 4 4 5 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT A 25 A 25 3 4 11 3 3 3 3 4 4 5 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT N 26 N 26 3 3 11 3 3 3 3 3 4 5 6 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT E 27 E 27 3 7 11 3 3 3 5 6 7 8 8 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT L 28 L 28 3 7 11 1 3 4 5 7 7 8 8 8 8 9 10 10 11 11 11 11 12 12 13
LCS_GDT R 29 R 29 3 7 11 3 3 4 5 7 7 8 8 8 8 9 9 10 11 11 11 11 12 12 13
LCS_GDT V 30 V 30 3 7 10 3 3 4 5 7 7 8 8 8 8 9 9 9 10 10 10 11 12 12 13
LCS_GDT T 31 T 31 4 7 11 3 4 4 5 7 7 8 8 8 8 9 9 9 10 10 10 12 12 12 13
LCS_GDT E 32 E 32 4 7 12 3 4 4 5 7 7 8 8 8 8 9 9 9 11 11 11 12 12 12 13
LCS_GDT R 33 R 33 4 7 12 3 4 5 5 7 7 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT P 34 P 34 4 7 12 3 4 5 5 7 7 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT F 35 F 35 4 6 12 2 4 4 5 6 6 6 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT W 36 W 36 4 6 12 0 4 5 5 6 6 7 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT I 37 I 37 4 6 12 2 4 5 5 6 6 7 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT S 38 S 38 4 6 12 0 4 5 5 6 6 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT S 39 S 39 3 4 12 3 3 3 3 4 6 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT F 40 F 40 3 6 12 3 3 3 4 6 6 8 8 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT I 41 I 41 3 6 12 3 3 4 5 6 6 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT G 42 G 42 4 6 12 4 4 4 5 6 6 8 9 10 10 10 10 11 11 11 12 12 12 12 12
LCS_GDT R 43 R 43 4 6 12 4 4 4 5 6 6 8 8 8 9 9 10 11 11 11 12 12 12 12 12
LCS_GDT S 44 S 44 4 6 12 4 4 4 5 6 6 8 8 8 9 9 10 11 11 11 12 12 12 12 12
LCS_GDT K 45 K 45 4 6 11 4 4 4 5 6 6 8 8 8 9 9 10 10 10 10 10 11 12 12 12
LCS_AVERAGE LCS_A: 15.69 ( 8.16 12.96 25.93 )
GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00
GDT NUMBER_AT 4 4 5 5 7 7 9 9 10 10 10 11 11 12 12 13 13 13 15 16
GDT PERCENT_AT 9.09 9.09 11.36 11.36 15.91 15.91 20.45 20.45 22.73 22.73 22.73 25.00 25.00 27.27 27.27 29.55 29.55 29.55 34.09 36.36
GDT RMS_LOCAL 0.35 0.35 1.00 1.00 1.76 1.76 2.47 2.47 3.27 3.27 3.27 3.99 3.99 4.47 4.47 5.06 5.06 5.06 6.62 7.00
GDT RMS_ALL_AT 66.29 66.29 51.37 51.37 37.16 37.16 59.97 59.97 53.98 53.98 53.98 57.43 57.43 56.09 56.09 55.77 55.77 55.77 52.07 51.63
# Checking swapping
# possible swapping detected: Y 12 Y 12
# possible swapping detected: E 15 E 15
# possible swapping detected: F 35 F 35
# Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at
LGA A 2 A 2 1.713 0 0.045 0.059 4.138 36.364 30.182 -
LGA V 3 V 3 3.392 0 0.063 0.074 7.507 42.727 24.416 7.296
LGA Q 4 Q 4 2.003 0 0.077 0.120 9.586 27.273 12.727 9.361
LGA G 5 G 5 2.079 0 0.178 0.178 2.920 53.182 53.182 -
LGA P 6 P 6 0.463 0 0.731 0.570 2.559 72.727 67.532 1.587
LGA W 7 W 7 3.261 0 0.327 1.184 12.439 22.273 6.364 11.950
LGA V 8 V 8 3.105 0 0.680 0.875 7.486 47.273 27.013 6.353
LGA G 9 G 9 1.413 0 0.558 0.558 3.541 38.182 38.182 -
LGA S 10 S 10 3.074 0 0.682 0.857 5.652 26.364 20.606 5.652
LGA S 11 S 11 7.647 0 0.629 0.930 9.884 0.000 0.000 9.729
LGA Y 12 Y 12 11.224 0 0.608 1.032 18.934 0.000 0.000 18.934
LGA V 13 V 13 10.060 0 0.610 0.607 10.646 0.000 0.000 8.935
LGA A 14 A 14 12.785 0 0.619 0.604 14.559 0.000 0.000 -
LGA E 15 E 15 18.995 0 0.656 1.303 25.284 0.000 0.000 25.284
LGA T 16 T 16 21.527 0 0.669 1.401 24.475 0.000 0.000 22.859
LGA G 17 G 17 21.768 0 0.714 0.714 21.892 0.000 0.000 -
LGA Q 18 Q 18 24.351 0 0.112 0.990 27.218 0.000 0.000 26.616
LGA N 19 N 19 26.848 0 0.638 0.745 28.678 0.000 0.000 24.107
LGA W 20 W 20 31.723 0 0.079 1.131 35.137 0.000 0.000 29.006
LGA A 21 A 21 38.406 0 0.646 0.604 40.121 0.000 0.000 -
LGA S 22 S 22 42.985 0 0.639 0.817 44.780 0.000 0.000 43.570
LGA L 23 L 23 43.305 0 0.613 0.899 45.631 0.000 0.000 40.648
LGA A 24 A 24 46.660 0 0.638 0.613 48.886 0.000 0.000 -
LGA A 25 A 25 53.279 0 0.616 0.602 55.594 0.000 0.000 -
LGA N 26 N 26 54.478 0 0.619 0.962 56.893 0.000 0.000 56.893
LGA E 27 E 27 55.577 0 0.667 1.081 57.359 0.000 0.000 56.993
LGA L 28 L 28 59.063 0 0.600 1.253 63.210 0.000 0.000 55.249
LGA R 29 R 29 65.878 0 0.585 1.528 72.435 0.000 0.000 72.435
LGA V 30 V 30 69.379 0 0.157 1.017 71.323 0.000 0.000 70.760
LGA T 31 T 31 75.154 0 0.720 1.450 78.798 0.000 0.000 78.798
LGA E 32 E 32 79.747 0 0.037 1.136 83.938 0.000 0.000 83.938
LGA R 33 R 33 82.141 0 0.060 1.299 84.843 0.000 0.000 80.511
LGA P 34 P 34 84.619 0 0.082 0.295 86.772 0.000 0.000 86.772
LGA F 35 F 35 84.771 0 0.168 1.190 85.615 0.000 0.000 75.774
LGA W 36 W 36 87.508 0 0.096 1.157 95.384 0.000 0.000 93.690
LGA I 37 I 37 87.036 0 0.653 0.604 88.109 0.000 0.000 86.138
LGA S 38 S 38 90.596 0 0.691 0.615 93.080 0.000 0.000 93.080
LGA S 39 S 39 95.519 0 0.721 0.878 97.498 0.000 0.000 96.299
LGA F 40 F 40 94.251 0 0.673 0.909 95.907 0.000 0.000 95.907
LGA I 41 I 41 95.754 0 0.082 1.043 98.399 0.000 0.000 95.493
LGA G 42 G 42 99.284 0 0.686 0.686 99.856 0.000 0.000 -
LGA R 43 R 43 101.627 0 0.069 1.137 106.864 0.000 0.000 105.296
LGA S 44 S 44 102.280 0 0.020 0.032 103.783 0.000 0.000 101.334
LGA K 45 K 45 104.042 0 0.038 0.715 105.430 0.000 0.000 99.848
# RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at
NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35
SUMMARY(RMSD_GDC): 29.871 29.857 29.965 8.326 6.368 1.455
#CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q
SUMMARY(GDT) 44 44 4.0 9 2.47 17.614 17.137 0.351
LGA_LOCAL RMSD: 2.466 Number of atoms: 9 under DIST: 4.00
LGA_ASGN_ATOMS RMSD: 59.967 Number of assigned atoms: 44
Std_ASGN_ATOMS RMSD: 29.871 Standard rmsd on all 44 assigned CA atoms
Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2)
X_new = -0.783970 * X + 0.330454 * Y + -0.525538 * Z + 117.318062
Y_new = -0.363812 * X + -0.930508 * Y + -0.042381 * Z + -172.378372
Z_new = -0.503022 * X + 0.157972 * Y + 0.849714 * Z + 15.680477
Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
Phi Theta Psi [DEG: Phi Theta Psi ]
XYZ: -2.707105 0.527092 0.183813 [DEG: -155.1057 30.2001 10.5317 ]
ZXZ: -1.490328 0.555354 -1.266504 [DEG: -85.3895 31.8194 -72.5654 ]
# END of job
REMARK ----------------------------------------------------------
REMARK Citing LGA:
REMARK Zemla A., LGA - a Method for Finding 3D Similarities in
REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31,
REMARK No. 13, pp. 3370-3374.
REMARK ----------------------------------------------------------
REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule
REMARK 1: T0953s2TS007_1-D1
REMARK 2: T0953s2-D1.pdb
REMARK GDT and LCS analysis
REMARK FIXED Atom-Atom correspondence
REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS007_1-D1.lga
REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global
REMARK SUMMARY: 44 44 4.0 9 2.47 17.137 29.87
REMARK ----------------------------------------------------------
MOLECULE T0953s2TS007_1-D1
PFRMAT TS
TARGET T0953s2
MODEL 1
PARENT 2lrg_A
ATOM 9 N ALA 2 8.441 37.098 14.244 1.00177.04
ATOM 10 CA ALA 2 8.846 36.288 13.140 1.00177.04
ATOM 11 CB ALA 2 7.672 35.735 12.315 1.00177.04
ATOM 12 C ALA 2 9.674 37.147 12.250 1.00177.04
ATOM 13 O ALA 2 9.510 38.365 12.211 1.00177.04
ATOM 14 N VAL 3 10.616 36.515 11.525 1.00 77.00
ATOM 15 CA VAL 3 11.480 37.242 10.647 1.00 77.00
ATOM 16 CB VAL 3 12.602 36.406 10.100 1.00 77.00
ATOM 17 CG1 VAL 3 13.385 37.240 9.071 1.00 77.00
ATOM 18 CG2 VAL 3 13.456 35.908 11.277 1.00 77.00
ATOM 19 C VAL 3 10.656 37.711 9.495 1.00 77.00
ATOM 20 O VAL 3 9.789 36.995 9.000 1.00 77.00
ATOM 21 N GLN 4 10.906 38.959 9.055 1.00174.14
ATOM 22 CA GLN 4 10.174 39.504 7.955 1.00174.14
ATOM 23 CB GLN 4 9.890 41.013 8.090 1.00174.14
ATOM 24 CG GLN 4 8.949 41.337 9.254 1.00174.14
ATOM 25 CD GLN 4 8.733 42.843 9.305 1.00174.14
ATOM 26 OE1 GLN 4 9.682 43.621 9.219 1.00174.14
ATOM 27 NE2 GLN 4 7.450 43.272 9.455 1.00174.14
ATOM 28 C GLN 4 10.980 39.271 6.720 1.00174.14
ATOM 29 O GLN 4 12.174 38.981 6.784 1.00174.14
ATOM 30 N GLY 5 10.323 39.373 5.552 1.00 64.85
ATOM 31 CA GLY 5 10.982 39.140 4.302 1.00 64.85
ATOM 32 C GLY 5 9.901 39.114 3.279 1.00 64.85
ATOM 33 O GLY 5 8.928 39.860 3.375 1.00 64.85
ATOM 34 N PRO 6 10.049 38.290 2.286 1.00 85.52
ATOM 35 CA PRO 6 8.995 38.157 1.328 1.00 85.52
ATOM 36 CD PRO 6 11.342 37.943 1.726 1.00 85.52
ATOM 37 CB PRO 6 9.587 37.375 0.150 1.00 85.52
ATOM 38 CG PRO 6 10.980 36.922 0.636 1.00 85.52
ATOM 39 C PRO 6 7.892 37.486 2.068 1.00 85.52
ATOM 40 O PRO 6 8.180 36.687 2.958 1.00 85.52
ATOM 41 N TRP 7 6.627 37.795 1.745 1.00198.56
ATOM 42 CA TRP 7 5.590 37.212 2.535 1.00198.56
ATOM 43 CB TRP 7 4.285 38.027 2.521 1.00198.56
ATOM 44 CG TRP 7 4.412 39.375 3.196 1.00198.56
ATOM 45 CD2 TRP 7 4.757 40.595 2.517 1.00198.56
ATOM 46 CD1 TRP 7 4.231 39.704 4.508 1.00198.56
ATOM 47 NE1 TRP 7 4.445 41.050 4.690 1.00198.56
ATOM 48 CE2 TRP 7 4.769 41.610 3.473 1.00198.56
ATOM 49 CE3 TRP 7 5.042 40.846 1.205 1.00198.56
ATOM 50 CZ2 TRP 7 5.068 42.899 3.131 1.00198.56
ATOM 51 CZ3 TRP 7 5.339 42.148 0.863 1.00198.56
ATOM 52 CH2 TRP 7 5.352 43.153 1.808 1.00198.56
ATOM 53 C TRP 7 5.310 35.843 2.018 1.00198.56
ATOM 54 O TRP 7 5.053 35.642 0.832 1.00198.56
ATOM 55 N VAL 8 5.387 34.853 2.927 1.00109.73
ATOM 56 CA VAL 8 5.095 33.494 2.591 1.00109.73
ATOM 57 CB VAL 8 6.318 32.661 2.341 1.00109.73
ATOM 58 CG1 VAL 8 7.163 32.631 3.626 1.00109.73
ATOM 59 CG2 VAL 8 5.870 31.269 1.866 1.00109.73
ATOM 60 C VAL 8 4.410 32.926 3.784 1.00109.73
ATOM 61 O VAL 8 4.643 33.370 4.906 1.00109.73
ATOM 62 N GLY 9 3.521 31.939 3.575 1.00108.37
ATOM 63 CA GLY 9 2.865 31.376 4.713 1.00108.37
ATOM 64 C GLY 9 2.651 29.928 4.443 1.00108.37
ATOM 65 O GLY 9 1.881 29.546 3.566 1.00108.37
ATOM 66 N SER 10 3.343 29.075 5.215 1.00213.74
ATOM 67 CA SER 10 3.175 27.662 5.072 1.00213.74
ATOM 68 CB SER 10 3.744 27.097 3.761 1.00213.74
ATOM 69 OG SER 10 3.536 25.692 3.705 1.00213.74
ATOM 70 C SER 10 3.935 27.042 6.191 1.00213.74
ATOM 71 O SER 10 4.795 27.679 6.792 1.00213.74
ATOM 72 N SER 11 3.615 25.778 6.520 1.00171.30
ATOM 73 CA SER 11 4.357 25.131 7.558 1.00171.30
ATOM 74 CB SER 11 3.544 24.887 8.840 1.00171.30
ATOM 75 OG SER 11 3.162 26.129 9.413 1.00171.30
ATOM 76 C SER 11 4.746 23.799 7.020 1.00171.30
ATOM 77 O SER 11 3.937 23.114 6.394 1.00171.30
ATOM 78 N TYR 12 6.009 23.396 7.239 1.00228.30
ATOM 79 CA TYR 12 6.402 22.120 6.735 1.00228.30
ATOM 80 CB TYR 12 7.668 22.156 5.865 1.00228.30
ATOM 81 CG TYR 12 8.002 20.738 5.558 1.00228.30
ATOM 82 CD1 TYR 12 7.358 20.067 4.545 1.00228.30
ATOM 83 CD2 TYR 12 8.962 20.078 6.289 1.00228.30
ATOM 84 CE1 TYR 12 7.667 18.756 4.266 1.00228.30
ATOM 85 CE2 TYR 12 9.276 18.767 6.016 1.00228.30
ATOM 86 CZ TYR 12 8.631 18.105 5.000 1.00228.30
ATOM 87 OH TYR 12 8.949 16.761 4.714 1.00228.30
ATOM 88 C TYR 12 6.694 21.235 7.895 1.00228.30
ATOM 89 O TYR 12 7.712 21.383 8.570 1.00228.30
ATOM 90 N VAL 13 5.785 20.282 8.157 1.00 86.89
ATOM 91 CA VAL 13 6.010 19.353 9.217 1.00 86.89
ATOM 92 CB VAL 13 5.262 19.688 10.472 1.00 86.89
ATOM 93 CG1 VAL 13 5.457 18.542 11.478 1.00 86.89
ATOM 94 CG2 VAL 13 5.748 21.056 10.977 1.00 86.89
ATOM 95 C VAL 13 5.500 18.039 8.745 1.00 86.89
ATOM 96 O VAL 13 4.420 17.955 8.162 1.00 86.89
ATOM 97 N ALA 14 6.276 16.967 8.972 1.00269.93
ATOM 98 CA ALA 14 5.804 15.681 8.567 1.00269.93
ATOM 99 CB ALA 14 5.628 15.531 7.046 1.00269.93
ATOM 100 C ALA 14 6.828 14.688 8.985 1.00269.93
ATOM 101 O ALA 14 7.972 15.037 9.267 1.00269.93
ATOM 102 N GLU 15 6.424 13.407 9.052 1.00271.74
ATOM 103 CA GLU 15 7.362 12.386 9.395 1.00271.74
ATOM 104 CB GLU 15 6.702 11.081 9.873 1.00271.74
ATOM 105 CG GLU 15 7.686 10.090 10.493 1.00271.74
ATOM 106 CD GLU 15 6.876 8.918 11.026 1.00271.74
ATOM 107 OE1 GLU 15 5.641 8.896 10.778 1.00271.74
ATOM 108 OE2 GLU 15 7.479 8.031 11.687 1.00271.74
ATOM 109 C GLU 15 8.123 12.102 8.147 1.00271.74
ATOM 110 O GLU 15 7.619 12.305 7.043 1.00271.74
ATOM 111 N THR 16 9.375 11.634 8.281 1.00235.30
ATOM 112 CA THR 16 10.124 11.399 7.087 1.00235.30
ATOM 113 CB THR 16 11.563 11.824 7.191 1.00235.30
ATOM 114 OG1 THR 16 12.192 11.745 5.922 1.00235.30
ATOM 115 CG2 THR 16 12.295 10.934 8.209 1.00235.30
ATOM 116 C THR 16 10.069 9.939 6.785 1.00235.30
ATOM 117 O THR 16 10.346 9.093 7.633 1.00235.30
ATOM 118 N GLY 17 9.656 9.615 5.547 1.00100.53
ATOM 119 CA GLY 17 9.570 8.245 5.139 1.00100.53
ATOM 120 C GLY 17 8.279 7.716 5.667 1.00100.53
ATOM 121 O GLY 17 7.639 8.342 6.510 1.00100.53
ATOM 122 N GLN 18 7.859 6.535 5.177 1.00276.08
ATOM 123 CA GLN 18 6.651 5.949 5.673 1.00276.08
ATOM 124 CB GLN 18 5.424 6.190 4.773 1.00276.08
ATOM 125 CG GLN 18 5.523 5.540 3.391 1.00276.08
ATOM 126 CD GLN 18 4.249 5.882 2.626 1.00276.08
ATOM 127 OE1 GLN 18 3.541 4.999 2.144 1.00276.08
ATOM 128 NE2 GLN 18 3.952 7.204 2.506 1.00276.08
ATOM 129 C GLN 18 6.878 4.479 5.739 1.00276.08
ATOM 130 O GLN 18 7.775 3.947 5.087 1.00276.08
ATOM 131 N ASN 19 6.077 3.779 6.561 1.00199.27
ATOM 132 CA ASN 19 6.233 2.360 6.621 1.00199.27
ATOM 133 CB ASN 19 5.914 1.760 7.999 1.00199.27
ATOM 134 CG ASN 19 7.033 2.138 8.959 1.00199.27
ATOM 135 OD1 ASN 19 6.883 2.038 10.175 1.00199.27
ATOM 136 ND2 ASN 19 8.189 2.586 8.398 1.00199.27
ATOM 137 C ASN 19 5.248 1.797 5.659 1.00199.27
ATOM 138 O ASN 19 4.038 1.887 5.865 1.00199.27
ATOM 139 N TRP 20 5.751 1.205 4.561 1.00339.92
ATOM 140 CA TRP 20 4.864 0.649 3.586 1.00339.92
ATOM 141 CB TRP 20 4.950 1.360 2.223 1.00339.92
ATOM 142 CG TRP 20 3.977 0.852 1.184 1.00339.92
ATOM 143 CD2 TRP 20 2.659 1.389 1.003 1.00339.92
ATOM 144 CD1 TRP 20 4.124 -0.137 0.255 1.00339.92
ATOM 145 NE1 TRP 20 2.977 -0.249 -0.495 1.00339.92
ATOM 146 CE2 TRP 20 2.066 0.685 -0.046 1.00339.92
ATOM 147 CE3 TRP 20 1.997 2.392 1.655 1.00339.92
ATOM 148 CZ2 TRP 20 0.798 0.976 -0.461 1.00339.92
ATOM 149 CZ3 TRP 20 0.716 2.677 1.238 1.00339.92
ATOM 150 CH2 TRP 20 0.129 1.983 0.199 1.00339.92
ATOM 151 C TRP 20 5.301 -0.759 3.372 1.00339.92
ATOM 152 O TRP 20 6.495 -1.051 3.351 1.00339.92
ATOM 153 N ALA 21 4.338 -1.689 3.231 1.00276.97
ATOM 154 CA ALA 21 4.755 -3.035 2.989 1.00276.97
ATOM 155 CB ALA 21 4.735 -3.926 4.241 1.00276.97
ATOM 156 C ALA 21 3.815 -3.648 2.009 1.00276.97
ATOM 157 O ALA 21 2.613 -3.398 2.040 1.00276.97
ATOM 158 N SER 22 4.362 -4.462 1.087 1.00191.55
ATOM 159 CA SER 22 3.531 -5.165 0.161 1.00191.55
ATOM 160 CB SER 22 4.241 -5.516 -1.160 1.00191.55
ATOM 161 OG SER 22 3.356 -6.210 -2.029 1.00191.55
ATOM 162 C SER 22 3.177 -6.440 0.840 1.00191.55
ATOM 163 O SER 22 3.907 -6.905 1.714 1.00191.55
ATOM 164 N LEU 23 2.032 -7.044 0.479 1.00238.96
ATOM 165 CA LEU 23 1.726 -8.281 1.128 1.00238.96
ATOM 166 CB LEU 23 0.239 -8.412 1.532 1.00238.96
ATOM 167 CG LEU 23 -0.117 -9.601 2.455 1.00238.96
ATOM 168 CD1 LEU 23 -1.620 -9.611 2.771 1.00238.96
ATOM 169 CD2 LEU 23 0.358 -10.958 1.907 1.00238.96
ATOM 170 C LEU 23 2.056 -9.343 0.135 1.00238.96
ATOM 171 O LEU 23 1.346 -9.540 -0.849 1.00238.96
ATOM 172 N ALA 24 3.176 -10.047 0.368 1.00275.49
ATOM 173 CA ALA 24 3.557 -11.115 -0.504 1.00275.49
ATOM 174 CB ALA 24 4.470 -10.678 -1.664 1.00275.49
ATOM 175 C ALA 24 4.339 -12.059 0.337 1.00275.49
ATOM 176 O ALA 24 4.908 -11.669 1.355 1.00275.49
ATOM 177 N ALA 25 4.373 -13.343 -0.053 1.00227.12
ATOM 178 CA ALA 25 5.139 -14.258 0.732 1.00227.12
ATOM 179 CB ALA 25 4.498 -15.650 0.859 1.00227.12
ATOM 180 C ALA 25 6.439 -14.429 0.028 1.00227.12
ATOM 181 O ALA 25 6.478 -14.735 -1.162 1.00227.12
ATOM 182 N ASN 26 7.551 -14.208 0.751 1.00207.86
ATOM 183 CA ASN 26 8.821 -14.394 0.127 1.00207.86
ATOM 184 CB ASN 26 9.799 -13.227 0.348 1.00207.86
ATOM 185 CG ASN 26 11.021 -13.481 -0.522 1.00207.86
ATOM 186 OD1 ASN 26 11.631 -14.548 -0.467 1.00207.86
ATOM 187 ND2 ASN 26 11.384 -12.476 -1.363 1.00207.86
ATOM 188 C ASN 26 9.415 -15.604 0.756 1.00207.86
ATOM 189 O ASN 26 9.771 -15.597 1.934 1.00207.86
ATOM 190 N GLU 27 9.538 -16.687 -0.030 1.00239.73
ATOM 191 CA GLU 27 10.105 -17.881 0.513 1.00239.73
ATOM 192 CB GLU 27 9.332 -19.158 0.136 1.00239.73
ATOM 193 CG GLU 27 9.915 -20.440 0.738 1.00239.73
ATOM 194 CD GLU 27 9.051 -21.614 0.288 1.00239.73
ATOM 195 OE1 GLU 27 8.792 -21.717 -0.940 1.00239.73
ATOM 196 OE2 GLU 27 8.633 -22.419 1.166 1.00239.73
ATOM 197 C GLU 27 11.472 -17.989 -0.065 1.00239.73
ATOM 198 O GLU 27 11.660 -17.857 -1.274 1.00239.73
ATOM 199 N LEU 28 12.476 -18.214 0.799 1.00242.53
ATOM 200 CA LEU 28 13.803 -18.318 0.285 1.00242.53
ATOM 201 CB LEU 28 14.867 -17.662 1.179 1.00242.53
ATOM 202 CG LEU 28 14.701 -16.137 1.341 1.00242.53
ATOM 203 CD1 LEU 28 14.943 -15.398 0.014 1.00242.53
ATOM 204 CD2 LEU 28 13.349 -15.791 1.984 1.00242.53
ATOM 205 C LEU 28 14.122 -19.772 0.207 1.00242.53
ATOM 206 O LEU 28 13.919 -20.517 1.165 1.00242.53
ATOM 207 N ARG 29 14.618 -20.216 -0.962 1.00265.91
ATOM 208 CA ARG 29 14.970 -21.594 -1.116 1.00265.91
ATOM 209 CB ARG 29 14.181 -22.312 -2.228 1.00265.91
ATOM 210 CG ARG 29 14.502 -23.806 -2.336 1.00265.91
ATOM 211 CD ARG 29 13.707 -24.533 -3.422 1.00265.91
ATOM 212 NE ARG 29 14.125 -25.964 -3.404 1.00265.91
ATOM 213 CZ ARG 29 13.337 -26.914 -3.985 1.00265.91
ATOM 214 NH1 ARG 29 12.160 -26.557 -4.578 1.00265.91
ATOM 215 NH2 ARG 29 13.724 -28.224 -3.981 1.00265.91
ATOM 216 C ARG 29 16.417 -21.619 -1.483 1.00265.91
ATOM 217 O ARG 29 16.937 -20.670 -2.067 1.00265.91
ATOM 218 N VAL 30 17.115 -22.709 -1.113 1.00122.39
ATOM 219 CA VAL 30 18.514 -22.803 -1.403 1.00122.39
ATOM 220 CB VAL 30 19.367 -23.017 -0.185 1.00122.39
ATOM 221 CG1 VAL 30 18.935 -24.328 0.496 1.00122.39
ATOM 222 CG2 VAL 30 20.843 -23.011 -0.619 1.00122.39
ATOM 223 C VAL 30 18.715 -23.982 -2.290 1.00122.39
ATOM 224 O VAL 30 17.965 -24.954 -2.233 1.00122.39
ATOM 225 N THR 31 19.743 -23.915 -3.153 1.00234.64
ATOM 226 CA THR 31 19.986 -25.025 -4.017 1.00234.64
ATOM 227 CB THR 31 21.102 -24.791 -4.992 1.00234.64
ATOM 228 OG1 THR 31 21.138 -25.826 -5.963 1.00234.64
ATOM 229 CG2 THR 31 22.428 -24.732 -4.216 1.00234.64
ATOM 230 C THR 31 20.382 -26.140 -3.115 1.00234.64
ATOM 231 O THR 31 21.019 -25.918 -2.087 1.00234.64
ATOM 232 N GLU 32 19.988 -27.379 -3.463 1.00255.28
ATOM 233 CA GLU 32 20.319 -28.447 -2.575 1.00255.28
ATOM 234 CB GLU 32 19.199 -29.478 -2.375 1.00255.28
ATOM 235 CG GLU 32 19.601 -30.590 -1.405 1.00255.28
ATOM 236 CD GLU 32 18.476 -31.613 -1.347 1.00255.28
ATOM 237 OE1 GLU 32 17.516 -31.483 -2.153 1.00255.28
ATOM 238 OE2 GLU 32 18.565 -32.537 -0.497 1.00255.28
ATOM 239 C GLU 32 21.475 -29.197 -3.134 1.00255.28
ATOM 240 O GLU 32 21.485 -29.580 -4.303 1.00255.28
ATOM 241 N ARG 33 22.501 -29.400 -2.290 1.00228.28
ATOM 242 CA ARG 33 23.626 -30.192 -2.673 1.00228.28
ATOM 243 CB ARG 33 24.957 -29.425 -2.570 1.00228.28
ATOM 244 CG ARG 33 26.161 -30.126 -3.202 1.00228.28
ATOM 245 CD ARG 33 27.451 -29.305 -3.099 1.00228.28
ATOM 246 NE ARG 33 28.550 -30.071 -3.753 1.00228.28
ATOM 247 CZ ARG 33 29.689 -29.423 -4.137 1.00228.28
ATOM 248 NH1 ARG 33 29.812 -28.081 -3.916 1.00228.28
ATOM 249 NH2 ARG 33 30.701 -30.106 -4.748 1.00228.28
ATOM 250 C ARG 33 23.640 -31.289 -1.665 1.00228.28
ATOM 251 O ARG 33 23.761 -31.037 -0.467 1.00228.28
ATOM 252 N PRO 34 23.491 -32.502 -2.104 1.00 98.24
ATOM 253 CA PRO 34 23.467 -33.579 -1.160 1.00 98.24
ATOM 254 CD PRO 34 22.695 -32.798 -3.282 1.00 98.24
ATOM 255 CB PRO 34 22.766 -34.751 -1.858 1.00 98.24
ATOM 256 CG PRO 34 22.679 -34.333 -3.339 1.00 98.24
ATOM 257 C PRO 34 24.848 -33.877 -0.696 1.00 98.24
ATOM 258 O PRO 34 25.791 -33.668 -1.458 1.00 98.24
ATOM 259 N PHE 35 24.997 -34.347 0.555 1.00179.52
ATOM 260 CA PHE 35 26.298 -34.734 1.002 1.00179.52
ATOM 261 CB PHE 35 26.551 -34.466 2.495 1.00179.52
ATOM 262 CG PHE 35 26.578 -32.993 2.704 1.00179.52
ATOM 263 CD1 PHE 35 25.407 -32.286 2.843 1.00179.52
ATOM 264 CD2 PHE 35 27.777 -32.322 2.764 1.00179.52
ATOM 265 CE1 PHE 35 25.433 -30.925 3.040 1.00179.52
ATOM 266 CE2 PHE 35 27.811 -30.963 2.960 1.00179.52
ATOM 267 CZ PHE 35 26.637 -30.262 3.097 1.00179.52
ATOM 268 C PHE 35 26.311 -36.209 0.825 1.00179.52
ATOM 269 O PHE 35 25.597 -36.929 1.520 1.00179.52
ATOM 270 N TRP 36 27.119 -36.709 -0.124 1.00313.39
ATOM 271 CA TRP 36 27.066 -38.119 -0.338 1.00313.39
ATOM 272 CB TRP 36 26.183 -38.492 -1.539 1.00313.39
ATOM 273 CG TRP 36 26.037 -39.970 -1.802 1.00313.39
ATOM 274 CD2 TRP 36 24.953 -40.772 -1.310 1.00313.39
ATOM 275 CD1 TRP 36 26.828 -40.799 -2.542 1.00313.39
ATOM 276 NE1 TRP 36 26.303 -42.069 -2.541 1.00313.39
ATOM 277 CE2 TRP 36 25.149 -42.067 -1.788 1.00313.39
ATOM 278 CE3 TRP 36 23.881 -40.456 -0.527 1.00313.39
ATOM 279 CZ2 TRP 36 24.270 -43.069 -1.489 1.00313.39
ATOM 280 CZ3 TRP 36 22.999 -41.469 -0.225 1.00313.39
ATOM 281 CH2 TRP 36 23.190 -42.751 -0.697 1.00313.39
ATOM 282 C TRP 36 28.448 -38.596 -0.626 1.00313.39
ATOM 283 O TRP 36 29.286 -37.857 -1.141 1.00313.39
ATOM 284 N ILE 37 28.718 -39.865 -0.274 1.00113.51
ATOM 285 CA ILE 37 29.992 -40.446 -0.558 1.00113.51
ATOM 286 CB ILE 37 30.709 -40.937 0.670 1.00113.51
ATOM 287 CG1 ILE 37 32.118 -41.430 0.307 1.00113.51
ATOM 288 CG2 ILE 37 29.823 -41.973 1.381 1.00113.51
ATOM 289 CD1 ILE 37 33.004 -41.671 1.526 1.00113.51
ATOM 290 C ILE 37 29.724 -41.607 -1.457 1.00113.51
ATOM 291 O ILE 37 28.897 -42.466 -1.151 1.00113.51
ATOM 292 N SER 38 30.393 -41.645 -2.624 1.00108.03
ATOM 293 CA SER 38 30.153 -42.733 -3.525 1.00108.03
ATOM 294 CB SER 38 30.482 -42.425 -4.997 1.00108.03
ATOM 295 OG SER 38 31.870 -42.171 -5.144 1.00108.03
ATOM 296 C SER 38 31.001 -43.878 -3.094 1.00108.03
ATOM 297 O SER 38 32.061 -43.695 -2.496 1.00108.03
ATOM 298 N SER 39 30.533 -45.106 -3.382 1.00166.16
ATOM 299 CA SER 39 31.271 -46.272 -3.010 1.00166.16
ATOM 300 CB SER 39 30.428 -47.558 -3.012 1.00166.16
ATOM 301 OG SER 39 29.398 -47.470 -2.038 1.00166.16
ATOM 302 C SER 39 32.349 -46.445 -4.023 1.00166.16
ATOM 303 O SER 39 32.284 -45.879 -5.113 1.00166.16
ATOM 304 N PHE 40 33.388 -47.226 -3.673 1.00230.15
ATOM 305 CA PHE 40 34.440 -47.466 -4.611 1.00230.15
ATOM 306 CB PHE 40 35.708 -48.055 -3.967 1.00230.15
ATOM 307 CG PHE 40 36.750 -48.151 -5.026 1.00230.15
ATOM 308 CD1 PHE 40 37.499 -47.046 -5.361 1.00230.15
ATOM 309 CD2 PHE 40 36.983 -49.339 -5.680 1.00230.15
ATOM 310 CE1 PHE 40 38.466 -47.124 -6.335 1.00230.15
ATOM 311 CE2 PHE 40 37.949 -49.423 -6.656 1.00230.15
ATOM 312 CZ PHE 40 38.689 -48.314 -6.985 1.00230.15
ATOM 313 C PHE 40 33.900 -48.462 -5.581 1.00230.15
ATOM 314 O PHE 40 33.187 -49.388 -5.198 1.00230.15
ATOM 315 N ILE 41 34.212 -48.288 -6.881 1.00101.70
ATOM 316 CA ILE 41 33.675 -49.198 -7.849 1.00101.70
ATOM 317 CB ILE 41 32.841 -48.537 -8.912 1.00101.70
ATOM 318 CG1 ILE 41 32.075 -49.595 -9.729 1.00101.70
ATOM 319 CG2 ILE 41 33.767 -47.639 -9.749 1.00101.70
ATOM 320 CD1 ILE 41 31.005 -49.019 -10.659 1.00101.70
ATOM 321 C ILE 41 34.808 -49.872 -8.543 1.00101.70
ATOM 322 O ILE 41 35.818 -49.248 -8.872 1.00101.70
ATOM 323 N GLY 42 34.669 -51.193 -8.753 1.00 81.23
ATOM 324 CA GLY 42 35.671 -51.944 -9.444 1.00 81.23
ATOM 325 C GLY 42 36.602 -52.490 -8.419 1.00 81.23
ATOM 326 O GLY 42 36.889 -51.842 -7.413 1.00 81.23
ATOM 327 N ARG 43 37.096 -53.717 -8.658 1.00301.75
ATOM 328 CA ARG 43 38.029 -54.314 -7.755 1.00301.75
ATOM 329 CB ARG 43 37.369 -54.938 -6.518 1.00301.75
ATOM 330 CG ARG 43 36.865 -53.896 -5.520 1.00301.75
ATOM 331 CD ARG 43 35.978 -54.488 -4.428 1.00301.75
ATOM 332 NE ARG 43 34.679 -54.841 -5.068 1.00301.75
ATOM 333 CZ ARG 43 34.009 -55.967 -4.688 1.00301.75
ATOM 334 NH1 ARG 43 34.539 -56.789 -3.737 1.00301.75
ATOM 335 NH2 ARG 43 32.806 -56.268 -5.262 1.00301.75
ATOM 336 C ARG 43 38.710 -55.405 -8.505 1.00301.75
ATOM 337 O ARG 43 38.164 -55.941 -9.469 1.00301.75
ATOM 338 N SER 44 39.942 -55.752 -8.090 1.00188.93
ATOM 339 CA SER 44 40.625 -56.808 -8.771 1.00188.93
ATOM 340 CB SER 44 41.857 -56.349 -9.568 1.00188.93
ATOM 341 OG SER 44 41.460 -55.541 -10.665 1.00188.93
ATOM 342 C SER 44 41.107 -57.771 -7.740 1.00188.93
ATOM 343 O SER 44 41.491 -57.386 -6.636 1.00188.93
ATOM 344 N LYS 45 41.082 -59.071 -8.088 1.00245.67
ATOM 345 CA LYS 45 41.524 -60.078 -7.175 1.00245.67
ATOM 346 CB LYS 45 40.380 -60.971 -6.663 1.00245.67
ATOM 347 CG LYS 45 40.757 -61.814 -5.446 1.00245.67
ATOM 348 CD LYS 45 39.554 -62.468 -4.765 1.00245.67
ATOM 349 CE LYS 45 38.439 -61.479 -4.414 1.00245.67
ATOM 350 NZ LYS 45 37.322 -62.188 -3.753 1.00245.67
ATOM 351 C LYS 45 42.479 -60.948 -7.923 1.00245.67
ATOM 352 O LYS 45 42.383 -61.084 -9.142 1.00245.67
TER
END