####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS116_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 13 - 32 4.89 18.11 LONGEST_CONTINUOUS_SEGMENT: 20 14 - 33 4.96 17.92 LONGEST_CONTINUOUS_SEGMENT: 20 17 - 36 4.91 18.27 LCS_AVERAGE: 40.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 1.52 18.09 LCS_AVERAGE: 16.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 0.98 18.15 LCS_AVERAGE: 12.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 14 3 5 5 5 7 8 9 9 11 11 11 12 12 13 14 15 17 17 18 18 LCS_GDT V 3 V 3 3 5 14 3 5 5 5 7 8 9 9 11 11 11 12 12 13 15 16 17 17 18 19 LCS_GDT Q 4 Q 4 4 7 14 3 3 4 5 7 8 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT G 5 G 5 4 7 14 3 4 4 5 7 8 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT P 6 P 6 4 7 14 3 4 4 5 6 8 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT W 7 W 7 4 7 14 3 5 5 5 6 7 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT V 8 V 8 4 7 14 3 5 5 5 7 8 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT G 9 G 9 3 7 14 3 5 5 5 7 8 9 9 11 11 11 12 13 15 15 16 17 17 18 19 LCS_GDT S 10 S 10 3 7 14 3 3 3 5 7 8 9 9 11 11 11 12 13 15 15 16 17 24 25 26 LCS_GDT S 11 S 11 3 4 15 3 3 3 4 5 6 7 9 11 11 11 12 14 17 19 22 24 25 25 26 LCS_GDT Y 12 Y 12 3 4 15 3 3 3 3 4 4 5 8 10 10 11 12 13 17 19 22 24 25 25 26 LCS_GDT V 13 V 13 3 4 20 3 3 3 4 4 4 7 9 11 11 11 14 16 20 22 23 24 25 25 26 LCS_GDT A 14 A 14 3 4 20 3 3 3 4 6 7 9 11 12 13 16 17 18 20 22 23 24 25 25 26 LCS_GDT E 15 E 15 3 4 20 3 3 4 5 6 7 9 11 12 13 16 17 18 20 22 23 24 25 25 26 LCS_GDT T 16 T 16 3 4 20 3 3 4 4 6 7 9 9 10 13 14 14 16 20 22 23 24 25 25 26 LCS_GDT G 17 G 17 3 4 20 3 4 4 5 6 7 9 11 12 15 17 18 18 20 22 23 24 25 25 26 LCS_GDT Q 18 Q 18 4 4 20 3 4 4 5 6 7 9 11 13 15 17 18 18 20 22 23 24 25 25 26 LCS_GDT N 19 N 19 4 4 20 3 3 5 6 9 9 11 13 14 15 17 18 18 20 22 23 24 25 25 26 LCS_GDT W 20 W 20 11 12 20 4 8 10 11 11 12 12 13 14 16 16 17 18 19 22 23 24 25 25 26 LCS_GDT A 21 A 21 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT S 22 S 22 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT L 23 L 23 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT A 24 A 24 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT A 25 A 25 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT N 26 N 26 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT E 27 E 27 11 12 20 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT L 28 L 28 11 12 20 5 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT R 29 R 29 11 12 20 6 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT V 30 V 30 11 12 20 3 4 7 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT T 31 T 31 5 12 20 2 4 5 6 9 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT E 32 E 32 5 10 20 3 4 5 6 9 9 12 13 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT R 33 R 33 3 7 20 3 3 3 5 6 8 11 12 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT P 34 P 34 5 6 20 3 4 5 5 6 8 11 12 14 16 17 18 18 20 22 23 24 25 25 26 LCS_GDT F 35 F 35 5 6 20 3 4 5 5 6 8 11 12 14 16 17 18 18 19 22 23 23 25 25 26 LCS_GDT W 36 W 36 5 6 20 3 4 5 5 6 8 9 11 14 14 16 16 17 17 20 21 22 23 24 24 LCS_GDT I 37 I 37 5 6 18 3 4 5 5 6 8 9 12 14 14 16 16 17 17 18 20 22 23 23 23 LCS_GDT S 38 S 38 5 6 18 0 3 5 5 6 8 9 12 14 14 16 16 17 17 18 20 22 23 23 23 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 5 6 9 12 12 14 16 16 17 17 18 20 22 23 23 23 LCS_GDT F 40 F 40 3 6 18 3 3 3 4 6 6 9 10 11 12 12 12 15 15 16 18 19 21 21 21 LCS_GDT I 41 I 41 5 6 18 5 5 5 5 6 6 9 10 11 12 12 12 15 15 16 18 19 21 21 21 LCS_GDT G 42 G 42 5 6 14 5 5 5 5 6 6 9 10 11 12 12 12 13 14 15 17 18 21 21 21 LCS_GDT R 43 R 43 5 6 14 5 5 5 5 6 6 9 9 9 10 11 11 11 13 13 13 14 14 14 16 LCS_GDT S 44 S 44 5 6 13 5 5 5 5 6 6 9 9 9 10 11 11 11 13 13 13 14 14 14 15 LCS_GDT K 45 K 45 5 6 12 5 5 5 5 6 6 9 9 9 10 10 10 10 11 12 12 12 12 13 13 LCS_AVERAGE LCS_A: 23.33 ( 12.96 16.79 40.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 11 11 12 12 13 14 16 17 18 18 20 22 23 24 25 25 26 GDT PERCENT_AT 15.91 20.45 22.73 25.00 25.00 27.27 27.27 29.55 31.82 36.36 38.64 40.91 40.91 45.45 50.00 52.27 54.55 56.82 56.82 59.09 GDT RMS_LOCAL 0.32 0.50 0.67 0.98 0.98 1.52 1.52 2.06 2.55 3.85 4.10 4.28 4.20 5.06 5.39 5.56 5.91 6.05 6.05 6.40 GDT RMS_ALL_AT 18.18 18.34 18.22 18.15 18.15 18.09 18.09 17.96 17.59 18.78 17.34 17.59 17.97 17.53 17.57 17.43 17.56 17.48 17.48 17.37 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 36.987 0 0.046 0.080 38.106 0.000 0.000 - LGA V 3 V 3 31.538 0 0.085 1.030 33.960 0.000 0.000 31.357 LGA Q 4 Q 4 27.821 0 0.607 1.156 28.607 0.000 0.000 24.638 LGA G 5 G 5 26.668 0 0.035 0.035 27.684 0.000 0.000 - LGA P 6 P 6 27.144 0 0.118 0.106 27.148 0.000 0.000 26.086 LGA W 7 W 7 23.747 0 0.458 1.235 24.964 0.000 0.000 16.117 LGA V 8 V 8 22.916 0 0.655 0.674 24.916 0.000 0.000 22.492 LGA G 9 G 9 18.613 0 0.503 0.503 19.587 0.000 0.000 - LGA S 10 S 10 14.999 0 0.685 0.872 17.794 0.000 0.000 11.415 LGA S 11 S 11 17.618 0 0.605 0.571 20.441 0.000 0.000 20.441 LGA Y 12 Y 12 16.072 0 0.659 1.395 18.743 0.000 0.000 15.431 LGA V 13 V 13 15.231 0 0.609 0.608 15.870 0.000 0.000 14.461 LGA A 14 A 14 17.824 0 0.639 0.620 19.258 0.000 0.000 - LGA E 15 E 15 16.005 0 0.634 0.759 18.149 0.000 0.000 14.971 LGA T 16 T 16 15.628 0 0.736 1.426 15.628 0.000 0.000 14.807 LGA G 17 G 17 12.090 0 0.254 0.254 13.661 0.000 0.000 - LGA Q 18 Q 18 9.667 0 0.600 0.938 15.969 0.000 0.000 13.597 LGA N 19 N 19 6.873 0 0.078 0.119 12.253 1.364 0.682 10.409 LGA W 20 W 20 1.702 0 0.597 0.469 9.455 47.727 18.831 9.188 LGA A 21 A 21 1.976 0 0.050 0.051 2.128 50.909 48.364 - LGA S 22 S 22 1.632 0 0.044 0.672 1.695 50.909 53.333 1.219 LGA L 23 L 23 1.541 0 0.076 1.022 5.309 62.273 39.545 5.309 LGA A 24 A 24 0.831 0 0.030 0.033 0.973 81.818 81.818 - LGA A 25 A 25 1.007 0 0.055 0.058 1.167 73.636 72.000 - LGA N 26 N 26 1.260 0 0.058 0.092 1.834 65.455 60.000 1.694 LGA E 27 E 27 1.091 0 0.132 0.834 6.539 73.636 42.626 6.539 LGA L 28 L 28 0.931 0 0.472 1.398 5.677 60.455 39.318 5.677 LGA R 29 R 29 1.743 0 0.524 1.266 10.355 70.455 27.769 10.355 LGA V 30 V 30 1.813 0 0.146 0.194 3.028 39.545 39.221 2.726 LGA T 31 T 31 3.026 0 0.635 0.576 3.922 21.364 22.597 2.831 LGA E 32 E 32 4.720 0 0.589 1.089 7.899 1.818 0.808 6.297 LGA R 33 R 33 10.273 0 0.129 0.669 18.296 0.000 0.000 18.296 LGA P 34 P 34 10.905 0 0.653 0.661 12.695 0.000 0.000 12.695 LGA F 35 F 35 11.310 0 0.049 1.260 14.195 0.000 0.000 13.380 LGA W 36 W 36 14.902 0 0.029 1.174 22.877 0.000 0.000 22.877 LGA I 37 I 37 18.233 0 0.675 1.222 21.956 0.000 0.000 21.956 LGA S 38 S 38 21.619 0 0.683 0.613 23.907 0.000 0.000 23.907 LGA S 39 S 39 20.500 0 0.701 0.821 21.002 0.000 0.000 21.002 LGA F 40 F 40 22.955 0 0.668 1.477 24.341 0.000 0.000 24.220 LGA I 41 I 41 28.009 0 0.103 0.644 32.973 0.000 0.000 32.973 LGA G 42 G 42 26.693 0 0.161 0.161 27.501 0.000 0.000 - LGA R 43 R 43 26.992 0 0.041 1.445 27.972 0.000 0.000 24.425 LGA S 44 S 44 25.998 0 0.044 0.071 26.762 0.000 0.000 24.245 LGA K 45 K 45 27.567 0 0.062 0.806 31.175 0.000 0.000 31.175 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 17.016 16.863 17.039 15.940 12.430 4.883 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.06 31.818 27.712 0.603 LGA_LOCAL RMSD: 2.056 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.957 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 17.016 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.802180 * X + -0.046464 * Y + 0.595272 * Z + -48.137108 Y_new = 0.385712 * X + -0.720702 * Y + -0.576034 * Z + 58.983536 Z_new = 0.455778 * X + 0.691686 * Y + -0.560211 * Z + -83.182373 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.448194 -0.473247 2.251557 [DEG: 25.6796 -27.1150 129.0047 ] ZXZ: 0.801821 2.165436 0.582633 [DEG: 45.9410 124.0704 33.3824 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS116_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.06 27.712 17.02 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS116_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 3jurD1 ATOM 9 N ALA 2 -5.955 34.222 -19.094 1.00210.21 N ATOM 10 CA ALA 2 -5.241 33.288 -19.911 1.00210.21 C ATOM 11 CB ALA 2 -4.502 33.931 -21.098 1.00210.21 C ATOM 12 C ALA 2 -4.209 32.655 -19.045 1.00210.21 C ATOM 13 O ALA 2 -3.663 33.288 -18.143 1.00210.21 O ATOM 14 N VAL 3 -3.927 31.364 -19.298 1.00108.26 N ATOM 15 CA VAL 3 -2.953 30.681 -18.506 1.00108.26 C ATOM 16 CB VAL 3 -2.932 29.197 -18.723 1.00108.26 C ATOM 17 CG1 VAL 3 -2.422 28.921 -20.148 1.00108.26 C ATOM 18 CG2 VAL 3 -2.088 28.553 -17.612 1.00108.26 C ATOM 19 C VAL 3 -1.620 31.221 -18.892 1.00108.26 C ATOM 20 O VAL 3 -1.387 31.575 -20.047 1.00108.26 O ATOM 21 N GLN 4 -0.711 31.320 -17.906 1.00 39.16 N ATOM 22 CA GLN 4 0.595 31.847 -18.153 1.00 39.16 C ATOM 23 CB GLN 4 1.453 31.918 -16.880 1.00 39.16 C ATOM 24 CG GLN 4 0.868 32.841 -15.808 1.00 39.16 C ATOM 25 CD GLN 4 1.804 32.822 -14.610 1.00 39.16 C ATOM 26 OE1 GLN 4 1.569 33.500 -13.611 1.00 39.16 O ATOM 27 NE2 GLN 4 2.900 32.023 -14.711 1.00 39.16 N ATOM 28 C GLN 4 1.274 30.927 -19.109 1.00 39.16 C ATOM 29 O GLN 4 1.948 31.367 -20.039 1.00 39.16 O ATOM 30 N GLY 5 1.097 29.609 -18.909 1.00115.29 N ATOM 31 CA GLY 5 1.722 28.665 -19.787 1.00115.29 C ATOM 32 C GLY 5 0.722 27.592 -20.055 1.00115.29 C ATOM 33 O GLY 5 -0.259 27.444 -19.328 1.00115.29 O ATOM 34 N PRO 6 0.979 26.839 -21.090 1.00169.82 N ATOM 35 CA PRO 6 0.091 25.786 -21.499 1.00169.82 C ATOM 36 CD PRO 6 2.346 26.582 -21.508 1.00169.82 C ATOM 37 CB PRO 6 0.831 25.040 -22.604 1.00169.82 C ATOM 38 CG PRO 6 2.305 25.205 -22.194 1.00169.82 C ATOM 39 C PRO 6 -0.140 24.902 -20.322 1.00169.82 C ATOM 40 O PRO 6 -1.239 24.362 -20.188 1.00169.82 O ATOM 41 N TRP 7 0.881 24.731 -19.465 1.00247.24 N ATOM 42 CA TRP 7 0.702 23.922 -18.301 1.00247.24 C ATOM 43 CB TRP 7 1.882 22.992 -17.978 1.00247.24 C ATOM 44 CG TRP 7 1.631 22.131 -16.765 1.00247.24 C ATOM 45 CD2 TRP 7 2.660 21.648 -15.889 1.00247.24 C ATOM 46 CD1 TRP 7 0.447 21.681 -16.255 1.00247.24 C ATOM 47 NE1 TRP 7 0.676 20.945 -15.118 1.00247.24 N ATOM 48 CE2 TRP 7 2.033 20.920 -14.880 1.00247.24 C ATOM 49 CE3 TRP 7 4.015 21.809 -15.921 1.00247.24 C ATOM 50 CZ2 TRP 7 2.759 20.335 -13.881 1.00247.24 C ATOM 51 CZ3 TRP 7 4.744 21.215 -14.916 1.00247.24 C ATOM 52 CH2 TRP 7 4.127 20.493 -13.915 1.00247.24 C ATOM 53 C TRP 7 0.587 24.877 -17.167 1.00247.24 C ATOM 54 O TRP 7 1.069 26.007 -17.246 1.00247.24 O ATOM 55 N VAL 8 -0.079 24.456 -16.077 1.00 55.90 N ATOM 56 CA VAL 8 -0.245 25.349 -14.973 1.00 55.90 C ATOM 57 CB VAL 8 -1.298 24.902 -14.004 1.00 55.90 C ATOM 58 CG1 VAL 8 -1.364 25.915 -12.848 1.00 55.90 C ATOM 59 CG2 VAL 8 -2.619 24.717 -14.767 1.00 55.90 C ATOM 60 C VAL 8 1.040 25.395 -14.219 1.00 55.90 C ATOM 61 O VAL 8 1.637 24.363 -13.917 1.00 55.90 O ATOM 62 N GLY 9 1.512 26.615 -13.916 1.00 65.96 N ATOM 63 CA GLY 9 2.703 26.738 -13.136 1.00 65.96 C ATOM 64 C GLY 9 2.247 26.861 -11.724 1.00 65.96 C ATOM 65 O GLY 9 1.053 26.767 -11.441 1.00 65.96 O ATOM 66 N SER 10 3.192 27.080 -10.794 1.00153.55 N ATOM 67 CA SER 10 2.775 27.254 -9.438 1.00153.55 C ATOM 68 CB SER 10 3.937 27.307 -8.431 1.00153.55 C ATOM 69 OG SER 10 3.436 27.480 -7.114 1.00153.55 O ATOM 70 C SER 10 2.089 28.576 -9.418 1.00153.55 C ATOM 71 O SER 10 2.497 29.504 -10.114 1.00153.55 O ATOM 72 N SER 11 1.010 28.697 -8.628 1.00197.21 N ATOM 73 CA SER 11 0.329 29.953 -8.629 1.00197.21 C ATOM 74 CB SER 11 -1.019 29.928 -9.371 1.00197.21 C ATOM 75 OG SER 11 -1.625 31.213 -9.326 1.00197.21 O ATOM 76 C SER 11 0.058 30.314 -7.211 1.00197.21 C ATOM 77 O SER 11 0.157 29.482 -6.310 1.00197.21 O ATOM 78 N TYR 12 -0.268 31.597 -6.979 1.00202.20 N ATOM 79 CA TYR 12 -0.556 32.025 -5.650 1.00202.20 C ATOM 80 CB TYR 12 -0.426 33.543 -5.446 1.00202.20 C ATOM 81 CG TYR 12 0.998 33.909 -5.682 1.00202.20 C ATOM 82 CD1 TYR 12 1.466 34.092 -6.964 1.00202.20 C ATOM 83 CD2 TYR 12 1.864 34.074 -4.627 1.00202.20 C ATOM 84 CE1 TYR 12 2.778 34.432 -7.190 1.00202.20 C ATOM 85 CE2 TYR 12 3.178 34.415 -4.847 1.00202.20 C ATOM 86 CZ TYR 12 3.637 34.595 -6.130 1.00202.20 C ATOM 87 OH TYR 12 4.985 34.945 -6.355 1.00202.20 O ATOM 88 C TYR 12 -1.978 31.672 -5.393 1.00202.20 C ATOM 89 O TYR 12 -2.851 31.914 -6.226 1.00202.20 O ATOM 90 N VAL 13 -2.237 31.059 -4.227 1.00 57.95 N ATOM 91 CA VAL 13 -3.573 30.696 -3.874 1.00 57.95 C ATOM 92 CB VAL 13 -3.712 29.253 -3.477 1.00 57.95 C ATOM 93 CG1 VAL 13 -5.152 28.992 -3.004 1.00 57.95 C ATOM 94 CG2 VAL 13 -3.287 28.379 -4.669 1.00 57.95 C ATOM 95 C VAL 13 -3.913 31.521 -2.681 1.00 57.95 C ATOM 96 O VAL 13 -3.029 31.971 -1.955 1.00 57.95 O ATOM 97 N ALA 14 -5.216 31.763 -2.462 1.00 42.45 N ATOM 98 CA ALA 14 -5.586 32.521 -1.309 1.00 42.45 C ATOM 99 CB ALA 14 -7.104 32.699 -1.137 1.00 42.45 C ATOM 100 C ALA 14 -5.089 31.727 -0.158 1.00 42.45 C ATOM 101 O ALA 14 -4.869 30.523 -0.282 1.00 42.45 O ATOM 102 N GLU 15 -4.847 32.388 0.988 1.00143.94 N ATOM 103 CA GLU 15 -4.339 31.638 2.090 1.00143.94 C ATOM 104 CB GLU 15 -4.098 32.483 3.354 1.00143.94 C ATOM 105 CG GLU 15 -3.443 31.707 4.499 1.00143.94 C ATOM 106 CD GLU 15 -1.983 31.465 4.140 1.00143.94 C ATOM 107 OE1 GLU 15 -1.608 31.737 2.968 1.00143.94 O ATOM 108 OE2 GLU 15 -1.223 31.002 5.032 1.00143.94 O ATOM 109 C GLU 15 -5.358 30.601 2.410 1.00143.94 C ATOM 110 O GLU 15 -6.505 30.906 2.737 1.00143.94 O ATOM 111 N THR 16 -4.942 29.325 2.323 1.00277.43 N ATOM 112 CA THR 16 -5.845 28.255 2.596 1.00277.43 C ATOM 113 CB THR 16 -5.574 27.005 1.808 1.00277.43 C ATOM 114 OG1 THR 16 -6.639 26.079 1.966 1.00277.43 O ATOM 115 CG2 THR 16 -4.253 26.390 2.300 1.00277.43 C ATOM 116 C THR 16 -5.624 27.958 4.025 1.00277.43 C ATOM 117 O THR 16 -4.528 28.164 4.545 1.00277.43 O ATOM 118 N GLY 17 -6.667 27.480 4.717 1.00226.01 N ATOM 119 CA GLY 17 -6.431 27.372 6.112 1.00226.01 C ATOM 120 C GLY 17 -6.303 28.798 6.514 1.00226.01 C ATOM 121 O GLY 17 -5.394 29.184 7.245 1.00226.01 O ATOM 122 N GLN 18 -7.204 29.626 5.956 1.00106.02 N ATOM 123 CA GLN 18 -7.212 31.024 6.244 1.00106.02 C ATOM 124 CB GLN 18 -8.381 31.746 5.551 1.00106.02 C ATOM 125 CG GLN 18 -9.756 31.252 6.010 1.00106.02 C ATOM 126 CD GLN 18 -10.822 32.035 5.255 1.00106.02 C ATOM 127 OE1 GLN 18 -10.706 33.243 5.063 1.00106.02 O ATOM 128 NE2 GLN 18 -11.889 31.323 4.803 1.00106.02 N ATOM 129 C GLN 18 -7.416 31.083 7.708 1.00106.02 C ATOM 130 O GLN 18 -6.852 31.923 8.406 1.00106.02 O ATOM 131 N ASN 19 -8.234 30.143 8.205 1.00 50.06 N ATOM 132 CA ASN 19 -8.492 30.060 9.607 1.00 50.06 C ATOM 133 CB ASN 19 -9.463 28.923 9.968 1.00 50.06 C ATOM 134 CG ASN 19 -10.830 29.287 9.408 1.00 50.06 C ATOM 135 OD1 ASN 19 -11.220 28.823 8.337 1.00 50.06 O ATOM 136 ND2 ASN 19 -11.582 30.142 10.150 1.00 50.06 N ATOM 137 C ASN 19 -7.188 29.773 10.278 1.00 50.06 C ATOM 138 O ASN 19 -6.895 30.315 11.343 1.00 50.06 O ATOM 139 N TRP 20 -6.360 28.913 9.655 1.00 41.19 N ATOM 140 CA TRP 20 -5.082 28.560 10.203 1.00 41.19 C ATOM 141 CB TRP 20 -4.296 27.559 9.333 1.00 41.19 C ATOM 142 CG TRP 20 -4.882 26.167 9.284 1.00 41.19 C ATOM 143 CD2 TRP 20 -4.551 25.112 10.203 1.00 41.19 C ATOM 144 CD1 TRP 20 -5.788 25.644 8.410 1.00 41.19 C ATOM 145 NE1 TRP 20 -6.043 24.331 8.722 1.00 41.19 N ATOM 146 CE2 TRP 20 -5.290 23.990 9.826 1.00 41.19 C ATOM 147 CE3 TRP 20 -3.703 25.080 11.274 1.00 41.19 C ATOM 148 CZ2 TRP 20 -5.188 22.815 10.514 1.00 41.19 C ATOM 149 CZ3 TRP 20 -3.604 23.893 11.968 1.00 41.19 C ATOM 150 CH2 TRP 20 -4.334 22.783 11.596 1.00 41.19 C ATOM 151 C TRP 20 -4.269 29.810 10.289 1.00 41.19 C ATOM 152 O TRP 20 -3.568 30.040 11.274 1.00 41.19 O ATOM 153 N ALA 21 -4.366 30.666 9.256 1.00 28.87 N ATOM 154 CA ALA 21 -3.615 31.886 9.215 1.00 28.87 C ATOM 155 CB ALA 21 -3.911 32.730 7.963 1.00 28.87 C ATOM 156 C ALA 21 -4.011 32.690 10.407 1.00 28.87 C ATOM 157 O ALA 21 -3.180 33.357 11.021 1.00 28.87 O ATOM 158 N SER 22 -5.305 32.640 10.769 1.00 61.09 N ATOM 159 CA SER 22 -5.775 33.383 11.901 1.00 61.09 C ATOM 160 CB SER 22 -7.273 33.165 12.176 1.00 61.09 C ATOM 161 OG SER 22 -7.675 33.924 13.306 1.00 61.09 O ATOM 162 C SER 22 -5.032 32.907 13.103 1.00 61.09 C ATOM 163 O SER 22 -4.747 33.681 14.017 1.00 61.09 O ATOM 164 N LEU 23 -4.682 31.606 13.133 1.00130.74 N ATOM 165 CA LEU 23 -3.975 31.083 14.262 1.00130.74 C ATOM 166 CB LEU 23 -3.698 29.568 14.128 1.00130.74 C ATOM 167 CG LEU 23 -2.970 28.908 15.320 1.00130.74 C ATOM 168 CD1 LEU 23 -1.501 29.346 15.433 1.00130.74 C ATOM 169 CD2 LEU 23 -3.756 29.102 16.627 1.00130.74 C ATOM 170 C LEU 23 -2.669 31.807 14.328 1.00130.74 C ATOM 171 O LEU 23 -2.227 32.210 15.402 1.00130.74 O ATOM 172 N ALA 24 -2.031 32.015 13.161 1.00 25.39 N ATOM 173 CA ALA 24 -0.750 32.662 13.105 1.00 25.39 C ATOM 174 CB ALA 24 -0.206 32.768 11.672 1.00 25.39 C ATOM 175 C ALA 24 -0.887 34.051 13.636 1.00 25.39 C ATOM 176 O ALA 24 -0.025 34.536 14.368 1.00 25.39 O ATOM 177 N ALA 25 -1.992 34.730 13.288 1.00 23.51 N ATOM 178 CA ALA 25 -2.183 36.076 13.740 1.00 23.51 C ATOM 179 CB ALA 25 -3.520 36.679 13.282 1.00 23.51 C ATOM 180 C ALA 25 -2.204 36.022 15.228 1.00 23.51 C ATOM 181 O ALA 25 -1.652 36.889 15.903 1.00 23.51 O ATOM 182 N ASN 26 -2.837 34.972 15.771 1.00 37.18 N ATOM 183 CA ASN 26 -2.938 34.796 17.185 1.00 37.18 C ATOM 184 CB ASN 26 -3.773 33.567 17.577 1.00 37.18 C ATOM 185 CG ASN 26 -5.226 33.909 17.281 1.00 37.18 C ATOM 186 OD1 ASN 26 -5.565 35.064 17.031 1.00 37.18 O ATOM 187 ND2 ASN 26 -6.116 32.881 17.328 1.00 37.18 N ATOM 188 C ASN 26 -1.558 34.626 17.730 1.00 37.18 C ATOM 189 O ASN 26 -1.297 34.976 18.879 1.00 37.18 O ATOM 190 N GLU 27 -0.639 34.087 16.904 1.00 39.66 N ATOM 191 CA GLU 27 0.699 33.841 17.351 1.00 39.66 C ATOM 192 CB GLU 27 1.619 33.356 16.217 1.00 39.66 C ATOM 193 CG GLU 27 1.208 32.000 15.638 1.00 39.66 C ATOM 194 CD GLU 27 2.188 31.638 14.530 1.00 39.66 C ATOM 195 OE1 GLU 27 3.207 32.362 14.382 1.00 39.66 O ATOM 196 OE2 GLU 27 1.928 30.632 13.815 1.00 39.66 O ATOM 197 C GLU 27 1.235 35.142 17.850 1.00 39.66 C ATOM 198 O GLU 27 1.810 35.203 18.933 1.00 39.66 O ATOM 199 N LEU 28 1.047 36.229 17.079 1.00130.71 N ATOM 200 CA LEU 28 1.461 37.502 17.591 1.00130.71 C ATOM 201 CB LEU 28 2.341 38.294 16.607 1.00130.71 C ATOM 202 CG LEU 28 2.808 39.663 17.136 1.00130.71 C ATOM 203 CD1 LEU 28 3.755 39.504 18.338 1.00130.71 C ATOM 204 CD2 LEU 28 3.412 40.516 16.008 1.00130.71 C ATOM 205 C LEU 28 0.193 38.265 17.785 1.00130.71 C ATOM 206 O LEU 28 -0.343 38.846 16.846 1.00130.71 O ATOM 207 N ARG 29 -0.315 38.309 19.030 1.00212.90 N ATOM 208 CA ARG 29 -1.580 38.947 19.229 1.00212.90 C ATOM 209 CB ARG 29 -2.129 38.768 20.652 1.00212.90 C ATOM 210 CG ARG 29 -2.510 37.309 20.909 1.00212.90 C ATOM 211 CD ARG 29 -2.955 36.995 22.335 1.00212.90 C ATOM 212 NE ARG 29 -3.260 35.536 22.368 1.00212.90 N ATOM 213 CZ ARG 29 -2.244 34.638 22.513 1.00212.90 C ATOM 214 NH1 ARG 29 -0.956 35.077 22.631 1.00212.90 N ATOM 215 NH2 ARG 29 -2.512 33.299 22.532 1.00212.90 N ATOM 216 C ARG 29 -1.430 40.393 18.919 1.00212.90 C ATOM 217 O ARG 29 -0.443 41.027 19.289 1.00212.90 O ATOM 218 N VAL 30 -2.426 40.949 18.201 1.00 63.27 N ATOM 219 CA VAL 30 -2.344 42.319 17.802 1.00 63.27 C ATOM 220 CB VAL 30 -2.425 42.513 16.315 1.00 63.27 C ATOM 221 CG1 VAL 30 -2.353 44.020 16.013 1.00 63.27 C ATOM 222 CG2 VAL 30 -1.315 41.687 15.643 1.00 63.27 C ATOM 223 C VAL 30 -3.505 43.048 18.388 1.00 63.27 C ATOM 224 O VAL 30 -4.586 42.492 18.572 1.00 63.27 O ATOM 225 N THR 31 -3.277 44.327 18.730 1.00193.50 N ATOM 226 CA THR 31 -4.307 45.178 19.242 1.00193.50 C ATOM 227 CB THR 31 -3.967 45.787 20.565 1.00193.50 C ATOM 228 OG1 THR 31 -2.814 46.607 20.444 1.00193.50 O ATOM 229 CG2 THR 31 -3.708 44.645 21.561 1.00193.50 C ATOM 230 C THR 31 -4.440 46.281 18.249 1.00193.50 C ATOM 231 O THR 31 -4.332 46.053 17.044 1.00193.50 O ATOM 232 N GLU 32 -4.702 47.513 18.722 1.00104.69 N ATOM 233 CA GLU 32 -4.760 48.584 17.774 1.00104.69 C ATOM 234 CB GLU 32 -5.025 49.963 18.406 1.00104.69 C ATOM 235 CG GLU 32 -6.409 50.115 19.039 1.00104.69 C ATOM 236 CD GLU 32 -6.333 49.623 20.478 1.00104.69 C ATOM 237 OE1 GLU 32 -5.506 50.178 21.251 1.00104.69 O ATOM 238 OE2 GLU 32 -7.099 48.684 20.823 1.00104.69 O ATOM 239 C GLU 32 -3.400 48.633 17.159 1.00104.69 C ATOM 240 O GLU 32 -3.257 48.758 15.943 1.00104.69 O ATOM 241 N ARG 33 -2.355 48.522 18.001 1.00231.92 N ATOM 242 CA ARG 33 -1.021 48.474 17.483 1.00231.92 C ATOM 243 CB ARG 33 0.072 48.942 18.461 1.00231.92 C ATOM 244 CG ARG 33 0.095 50.463 18.636 1.00231.92 C ATOM 245 CD ARG 33 0.334 51.221 17.325 1.00231.92 C ATOM 246 NE ARG 33 0.301 52.679 17.632 1.00231.92 N ATOM 247 CZ ARG 33 0.231 53.599 16.624 1.00231.92 C ATOM 248 NH1 ARG 33 0.156 53.191 15.325 1.00231.92 N ATOM 249 NH2 ARG 33 0.236 54.933 16.916 1.00231.92 N ATOM 250 C ARG 33 -0.757 47.056 17.096 1.00231.92 C ATOM 251 O ARG 33 -1.374 46.117 17.598 1.00231.92 O ATOM 252 N PRO 34 0.134 46.921 16.159 1.00264.12 N ATOM 253 CA PRO 34 0.469 45.636 15.605 1.00264.12 C ATOM 254 CD PRO 34 0.314 47.992 15.192 1.00264.12 C ATOM 255 CB PRO 34 1.274 45.932 14.341 1.00264.12 C ATOM 256 CG PRO 34 0.747 47.305 13.889 1.00264.12 C ATOM 257 C PRO 34 1.136 44.649 16.513 1.00264.12 C ATOM 258 O PRO 34 1.016 43.453 16.249 1.00264.12 O ATOM 259 N PHE 35 1.848 45.084 17.569 1.00219.48 N ATOM 260 CA PHE 35 2.538 44.098 18.354 1.00219.48 C ATOM 261 CB PHE 35 4.016 44.442 18.601 1.00219.48 C ATOM 262 CG PHE 35 4.695 44.637 17.290 1.00219.48 C ATOM 263 CD1 PHE 35 4.605 45.850 16.647 1.00219.48 C ATOM 264 CD2 PHE 35 5.426 43.626 16.711 1.00219.48 C ATOM 265 CE1 PHE 35 5.228 46.052 15.439 1.00219.48 C ATOM 266 CE2 PHE 35 6.052 43.822 15.501 1.00219.48 C ATOM 267 CZ PHE 35 5.953 45.036 14.866 1.00219.48 C ATOM 268 C PHE 35 1.917 44.074 19.711 1.00219.48 C ATOM 269 O PHE 35 1.489 45.111 20.216 1.00219.48 O ATOM 270 N TRP 36 1.823 42.886 20.344 1.00194.50 N ATOM 271 CA TRP 36 1.315 42.962 21.679 1.00194.50 C ATOM 272 CB TRP 36 -0.043 42.292 21.934 1.00194.50 C ATOM 273 CG TRP 36 -0.508 42.499 23.358 1.00194.50 C ATOM 274 CD2 TRP 36 -0.986 43.755 23.868 1.00194.50 C ATOM 275 CD1 TRP 36 -0.525 41.626 24.407 1.00194.50 C ATOM 276 NE1 TRP 36 -0.998 42.255 25.534 1.00194.50 N ATOM 277 CE2 TRP 36 -1.282 43.566 25.219 1.00194.50 C ATOM 278 CE3 TRP 36 -1.160 44.966 23.263 1.00194.50 C ATOM 279 CZ2 TRP 36 -1.758 44.590 25.988 1.00194.50 C ATOM 280 CZ3 TRP 36 -1.645 45.996 24.038 1.00194.50 C ATOM 281 CH2 TRP 36 -1.938 45.810 25.374 1.00194.50 C ATOM 282 C TRP 36 2.309 42.369 22.615 1.00194.50 C ATOM 283 O TRP 36 2.877 41.302 22.377 1.00194.50 O ATOM 284 N ILE 37 2.524 43.081 23.732 1.00 91.73 N ATOM 285 CA ILE 37 3.465 42.694 24.735 1.00 91.73 C ATOM 286 CB ILE 37 4.502 43.746 24.994 1.00 91.73 C ATOM 287 CG1 ILE 37 3.829 45.032 25.501 1.00 91.73 C ATOM 288 CG2 ILE 37 5.321 43.941 23.705 1.00 91.73 C ATOM 289 CD1 ILE 37 4.804 46.054 26.080 1.00 91.73 C ATOM 290 C ILE 37 2.687 42.504 25.994 1.00 91.73 C ATOM 291 O ILE 37 1.672 43.162 26.217 1.00 91.73 O ATOM 292 N SER 38 3.138 41.564 26.845 1.00 46.87 N ATOM 293 CA SER 38 2.429 41.288 28.059 1.00 46.87 C ATOM 294 CB SER 38 2.974 40.075 28.836 1.00 46.87 C ATOM 295 OG SER 38 4.289 40.336 29.306 1.00 46.87 O ATOM 296 C SER 38 2.526 42.480 28.955 1.00 46.87 C ATOM 297 O SER 38 3.496 43.235 28.913 1.00 46.87 O ATOM 298 N SER 39 1.485 42.689 29.782 1.00145.91 N ATOM 299 CA SER 39 1.511 43.796 30.688 1.00145.91 C ATOM 300 CB SER 39 0.125 44.169 31.244 1.00145.91 C ATOM 301 OG SER 39 0.237 45.273 32.130 1.00145.91 O ATOM 302 C SER 39 2.389 43.416 31.837 1.00145.91 C ATOM 303 O SER 39 2.496 42.248 32.202 1.00145.91 O ATOM 304 N PHE 40 3.062 44.419 32.426 1.00112.36 N ATOM 305 CA PHE 40 3.931 44.185 33.540 1.00112.36 C ATOM 306 CB PHE 40 5.415 44.383 33.179 1.00112.36 C ATOM 307 CG PHE 40 5.558 45.754 32.604 1.00112.36 C ATOM 308 CD1 PHE 40 5.759 46.854 33.407 1.00112.36 C ATOM 309 CD2 PHE 40 5.485 45.935 31.241 1.00112.36 C ATOM 310 CE1 PHE 40 5.888 48.108 32.855 1.00112.36 C ATOM 311 CE2 PHE 40 5.613 47.184 30.684 1.00112.36 C ATOM 312 CZ PHE 40 5.813 48.276 31.492 1.00112.36 C ATOM 313 C PHE 40 3.572 45.180 34.593 1.00112.36 C ATOM 314 O PHE 40 3.208 46.313 34.289 1.00112.36 O ATOM 315 N ILE 41 3.661 44.774 35.872 1.00126.39 N ATOM 316 CA ILE 41 3.332 45.659 36.950 1.00126.39 C ATOM 317 CB ILE 41 3.267 44.999 38.291 1.00126.39 C ATOM 318 CG1 ILE 41 2.145 43.945 38.333 1.00126.39 C ATOM 319 CG2 ILE 41 3.124 46.110 39.343 1.00126.39 C ATOM 320 CD1 ILE 41 0.748 44.526 38.120 1.00126.39 C ATOM 321 C ILE 41 4.408 46.690 37.028 1.00126.39 C ATOM 322 O ILE 41 5.583 46.399 36.817 1.00126.39 O ATOM 323 N GLY 42 4.009 47.938 37.331 1.00 86.08 N ATOM 324 CA GLY 42 4.903 49.058 37.372 1.00 86.08 C ATOM 325 C GLY 42 5.964 48.857 38.411 1.00 86.08 C ATOM 326 O GLY 42 7.101 49.282 38.224 1.00 86.08 O ATOM 327 N ARG 43 5.630 48.217 39.544 1.00166.10 N ATOM 328 CA ARG 43 6.570 48.110 40.625 1.00166.10 C ATOM 329 CB ARG 43 5.981 47.462 41.887 1.00166.10 C ATOM 330 CG ARG 43 5.501 46.025 41.688 1.00166.10 C ATOM 331 CD ARG 43 4.586 45.542 42.813 1.00166.10 C ATOM 332 NE ARG 43 3.203 45.969 42.459 1.00166.10 N ATOM 333 CZ ARG 43 2.756 47.211 42.801 1.00166.10 C ATOM 334 NH1 ARG 43 3.570 48.064 43.490 1.00166.10 N ATOM 335 NH2 ARG 43 1.497 47.603 42.447 1.00166.10 N ATOM 336 C ARG 43 7.776 47.328 40.211 1.00166.10 C ATOM 337 O ARG 43 7.747 46.589 39.227 1.00166.10 O ATOM 338 N SER 44 8.898 47.540 40.941 1.00 89.56 N ATOM 339 CA SER 44 10.121 46.830 40.687 1.00 89.56 C ATOM 340 CB SER 44 11.066 47.550 39.709 1.00 89.56 C ATOM 341 OG SER 44 10.489 47.594 38.414 1.00 89.56 O ATOM 342 C SER 44 10.871 46.677 41.979 1.00 89.56 C ATOM 343 O SER 44 10.679 47.447 42.918 1.00 89.56 O ATOM 344 N LYS 45 11.739 45.643 42.054 1.00 44.11 N ATOM 345 CA LYS 45 12.562 45.411 43.209 1.00 44.11 C ATOM 346 CB LYS 45 12.136 44.192 44.043 1.00 44.11 C ATOM 347 CG LYS 45 10.778 44.401 44.720 1.00 44.11 C ATOM 348 CD LYS 45 10.195 43.144 45.368 1.00 44.11 C ATOM 349 CE LYS 45 8.840 43.377 46.044 1.00 44.11 C ATOM 350 NZ LYS 45 8.375 42.134 46.697 1.00 44.11 N ATOM 351 C LYS 45 13.954 45.180 42.709 1.00 44.11 C ATOM 352 O LYS 45 14.152 44.870 41.536 1.00 44.11 O TER END