####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS156_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 14 - 30 4.96 15.70 LONGEST_CONTINUOUS_SEGMENT: 17 24 - 40 4.90 14.61 LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 4.69 15.47 LONGEST_CONTINUOUS_SEGMENT: 17 26 - 42 4.69 16.43 LCS_AVERAGE: 34.81 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.75 14.09 LONGEST_CONTINUOUS_SEGMENT: 11 28 - 38 1.98 14.74 LCS_AVERAGE: 15.24 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 30 - 34 0.94 14.59 LONGEST_CONTINUOUS_SEGMENT: 5 31 - 35 0.87 13.68 LCS_AVERAGE: 8.42 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 4 4 6 6 7 7 10 12 13 14 14 15 16 17 19 20 21 23 24 LCS_GDT V 3 V 3 4 6 9 3 4 4 6 6 7 7 10 10 11 12 15 16 18 18 19 20 21 23 24 LCS_GDT Q 4 Q 4 4 6 9 3 4 4 6 6 7 8 10 10 10 12 15 16 18 18 19 20 21 23 24 LCS_GDT G 5 G 5 4 6 12 3 4 4 6 6 7 8 10 10 11 12 15 16 18 18 19 20 21 23 24 LCS_GDT P 6 P 6 4 6 12 0 3 4 5 6 7 7 8 10 11 12 15 16 18 18 19 20 21 22 24 LCS_GDT W 7 W 7 4 6 12 0 3 4 6 6 7 7 8 10 11 12 15 16 18 18 19 20 21 23 24 LCS_GDT V 8 V 8 4 4 13 0 5 5 5 6 6 7 9 10 11 12 15 16 18 18 19 20 21 23 24 LCS_GDT G 9 G 9 4 4 13 0 3 4 5 5 6 7 8 9 10 12 14 16 18 18 19 20 21 22 23 LCS_GDT S 10 S 10 3 4 13 1 3 5 5 5 6 6 8 9 10 12 12 14 14 15 18 19 20 22 23 LCS_GDT S 11 S 11 4 4 13 3 3 5 5 5 6 6 6 9 10 12 12 13 13 14 17 18 19 22 23 LCS_GDT Y 12 Y 12 4 4 13 3 3 5 5 5 5 6 6 7 10 11 11 12 13 14 15 16 18 22 23 LCS_GDT V 13 V 13 4 4 13 3 3 4 4 4 5 7 8 9 10 11 12 14 14 14 19 20 20 22 23 LCS_GDT A 14 A 14 4 4 17 3 3 4 5 5 6 7 9 9 10 12 14 15 15 17 19 20 20 22 23 LCS_GDT E 15 E 15 3 6 17 3 3 3 5 6 7 7 9 10 13 14 16 16 17 18 19 20 21 22 24 LCS_GDT T 16 T 16 3 6 17 3 3 4 4 8 9 10 12 13 13 14 16 16 18 18 19 20 21 23 24 LCS_GDT G 17 G 17 3 6 17 3 3 4 6 8 9 10 12 13 13 14 16 16 18 18 19 20 21 22 24 LCS_GDT Q 18 Q 18 3 6 17 0 3 4 5 6 7 7 9 12 13 14 16 16 18 18 19 20 21 23 24 LCS_GDT N 19 N 19 4 6 17 3 5 5 5 6 7 8 9 12 13 14 16 16 17 18 19 20 21 23 24 LCS_GDT W 20 W 20 4 6 17 3 5 5 5 6 7 8 9 12 13 14 16 16 17 18 19 20 21 23 24 LCS_GDT A 21 A 21 4 6 17 3 5 5 6 6 7 8 9 12 13 14 16 16 17 18 18 19 21 23 24 LCS_GDT S 22 S 22 4 4 17 3 5 5 6 6 7 8 9 12 13 14 16 16 17 18 18 19 20 21 22 LCS_GDT L 23 L 23 4 5 17 3 4 4 6 6 6 8 9 11 12 14 16 16 17 18 19 20 21 23 24 LCS_GDT A 24 A 24 4 5 17 3 4 4 6 6 6 7 9 10 11 13 14 15 16 18 19 20 21 23 24 LCS_GDT A 25 A 25 4 5 17 3 4 4 4 6 7 8 9 12 13 14 16 16 17 18 19 20 21 23 24 LCS_GDT N 26 N 26 4 5 17 3 4 4 4 6 7 8 9 12 13 14 16 16 17 18 19 20 21 23 24 LCS_GDT E 27 E 27 3 11 17 3 3 6 8 9 11 12 12 13 13 15 16 16 18 18 19 20 21 23 24 LCS_GDT L 28 L 28 3 11 17 3 4 7 8 10 11 12 12 13 13 15 16 16 18 18 19 20 21 23 24 LCS_GDT R 29 R 29 3 11 17 3 3 5 5 10 11 12 12 13 13 15 16 16 18 18 19 20 21 23 24 LCS_GDT V 30 V 30 5 11 17 3 4 6 7 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT T 31 T 31 5 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT E 32 E 32 5 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT R 33 R 33 5 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT P 34 P 34 5 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT F 35 F 35 5 11 17 3 4 6 8 10 11 12 12 13 13 15 15 16 18 18 19 20 21 23 24 LCS_GDT W 36 W 36 4 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 17 17 19 20 21 23 24 LCS_GDT I 37 I 37 4 11 17 3 4 7 8 10 11 12 12 13 13 15 15 16 17 17 19 20 21 23 24 LCS_GDT S 38 S 38 3 11 17 0 3 5 6 9 11 12 12 13 13 15 15 16 17 17 19 20 21 23 24 LCS_GDT S 39 S 39 3 4 17 0 3 3 3 4 6 9 11 13 13 15 15 16 17 17 19 20 21 23 24 LCS_GDT F 40 F 40 3 4 17 0 3 3 3 4 4 5 7 11 13 15 16 16 17 18 19 19 20 23 24 LCS_GDT I 41 I 41 3 5 17 0 3 4 6 6 6 7 9 11 13 15 16 16 17 18 18 19 20 21 23 LCS_GDT G 42 G 42 3 5 17 1 3 4 6 6 6 7 9 10 12 13 14 16 17 17 18 19 20 21 22 LCS_GDT R 43 R 43 3 5 16 0 3 3 4 4 5 7 7 8 10 11 14 15 16 17 18 19 20 21 21 LCS_GDT S 44 S 44 3 5 14 1 3 3 4 4 5 5 6 7 9 10 11 12 13 13 15 15 18 19 21 LCS_GDT K 45 K 45 0 5 10 0 0 3 4 4 5 5 6 7 7 10 10 12 12 13 13 14 14 16 16 LCS_AVERAGE LCS_A: 19.49 ( 8.42 15.24 34.81 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 5 7 8 10 11 12 12 13 13 15 16 16 18 18 19 20 21 23 24 GDT PERCENT_AT 6.82 11.36 15.91 18.18 22.73 25.00 27.27 27.27 29.55 29.55 34.09 36.36 36.36 40.91 40.91 43.18 45.45 47.73 52.27 54.55 GDT RMS_LOCAL 0.04 0.81 1.10 1.20 1.60 1.75 2.08 2.08 3.01 2.64 3.71 4.08 4.08 5.04 5.04 5.24 5.42 6.30 6.79 6.92 GDT RMS_ALL_AT 18.92 18.61 14.21 14.22 14.31 14.09 14.45 14.45 14.08 14.00 15.95 15.84 15.84 12.16 12.16 12.15 12.22 13.42 13.59 13.65 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.177 0 0.076 0.116 10.283 0.000 0.000 - LGA V 3 V 3 11.885 0 0.065 0.104 13.856 0.000 0.000 13.856 LGA Q 4 Q 4 17.613 0 0.119 0.937 20.268 0.000 0.000 18.324 LGA G 5 G 5 22.393 0 0.196 0.196 22.393 0.000 0.000 - LGA P 6 P 6 22.845 0 0.699 0.571 26.689 0.000 0.000 26.689 LGA W 7 W 7 21.513 0 0.405 0.360 30.398 0.000 0.000 30.398 LGA V 8 V 8 17.659 0 0.678 0.681 19.468 0.000 0.000 15.826 LGA G 9 G 9 20.161 0 0.538 0.538 20.161 0.000 0.000 - LGA S 10 S 10 22.745 0 0.650 0.687 25.273 0.000 0.000 25.114 LGA S 11 S 11 20.071 0 0.539 0.978 20.564 0.000 0.000 17.675 LGA Y 12 Y 12 18.563 0 0.060 1.250 24.872 0.000 0.000 24.872 LGA V 13 V 13 18.637 0 0.642 0.656 20.051 0.000 0.000 19.947 LGA A 14 A 14 17.102 0 0.590 0.557 17.218 0.000 0.000 - LGA E 15 E 15 12.513 0 0.653 1.227 15.295 0.000 0.000 14.585 LGA T 16 T 16 10.605 0 0.589 0.974 11.368 0.000 0.000 10.587 LGA G 17 G 17 13.380 0 0.645 0.645 16.806 0.000 0.000 - LGA Q 18 Q 18 15.218 0 0.489 0.942 21.779 0.000 0.000 21.779 LGA N 19 N 19 16.829 0 0.636 1.175 20.443 0.000 0.000 20.443 LGA W 20 W 20 19.638 0 0.110 0.166 24.541 0.000 0.000 24.541 LGA A 21 A 21 18.800 0 0.654 0.604 19.198 0.000 0.000 - LGA S 22 S 22 22.224 0 0.061 0.600 25.919 0.000 0.000 25.919 LGA L 23 L 23 16.961 0 0.574 1.447 19.042 0.000 0.000 18.351 LGA A 24 A 24 12.623 0 0.635 0.607 14.622 0.000 0.000 - LGA A 25 A 25 11.588 0 0.309 0.328 13.818 0.000 0.000 - LGA N 26 N 26 8.484 0 0.630 0.812 13.942 0.000 0.000 11.320 LGA E 27 E 27 2.350 0 0.652 0.972 7.530 33.182 15.354 5.748 LGA L 28 L 28 1.458 0 0.356 1.410 4.438 58.182 52.727 0.929 LGA R 29 R 29 3.033 0 0.649 1.293 11.665 21.364 7.769 11.665 LGA V 30 V 30 2.705 0 0.302 1.136 6.613 48.636 28.052 6.387 LGA T 31 T 31 1.677 0 0.303 1.120 3.379 52.273 48.052 2.709 LGA E 32 E 32 0.743 0 0.261 0.813 3.684 78.182 49.697 3.210 LGA R 33 R 33 1.670 0 0.640 1.552 7.407 36.364 28.430 4.549 LGA P 34 P 34 1.076 0 0.694 0.610 2.748 52.273 43.117 2.748 LGA F 35 F 35 2.319 0 0.058 1.343 12.053 41.364 16.033 12.053 LGA W 36 W 36 0.664 0 0.028 0.208 2.286 65.909 55.584 2.286 LGA I 37 I 37 1.619 0 0.656 0.628 5.519 59.091 31.818 5.519 LGA S 38 S 38 3.441 0 0.671 0.755 4.683 15.909 12.424 4.452 LGA S 39 S 39 7.922 0 0.714 0.818 9.591 0.000 0.000 9.094 LGA F 40 F 40 8.598 0 0.635 0.950 12.943 0.000 0.000 12.937 LGA I 41 I 41 12.299 0 0.148 1.049 16.005 0.000 0.000 15.440 LGA G 42 G 42 17.225 0 0.710 0.710 17.788 0.000 0.000 - LGA R 43 R 43 18.960 0 0.226 1.138 26.273 0.000 0.000 25.965 LGA S 44 S 44 19.016 0 0.657 0.575 22.389 0.000 0.000 18.115 LGA K 45 K 45 19.261 0 0.640 0.748 21.600 0.000 0.000 13.389 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.517 11.411 12.269 12.789 8.842 5.714 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.08 25.000 23.626 0.551 LGA_LOCAL RMSD: 2.077 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.452 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.517 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.725640 * X + 0.544544 * Y + 0.420617 * Z + 163.590988 Y_new = -0.642715 * X + -0.754691 * Y + -0.131752 * Z + 219.574326 Z_new = 0.245691 * X + -0.365942 * Y + 0.897621 * Z + -137.908401 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.416722 -0.248232 -0.387109 [DEG: -138.4680 -14.2227 -22.1797 ] ZXZ: 1.267241 0.456455 2.550325 [DEG: 72.6076 26.1530 146.1229 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS156_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.08 23.626 11.52 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS156_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 4RU5_C ATOM 20 N ALA 2 16.171 38.330 16.355 1.00 3.61 ATOM 22 CA ALA 2 16.228 37.573 17.581 1.00 3.61 ATOM 24 CB ALA 2 17.668 37.166 17.956 1.00 3.61 ATOM 28 C ALA 2 15.667 38.407 18.707 1.00 3.61 ATOM 29 O ALA 2 15.949 39.600 18.819 1.00 3.61 ATOM 30 N VAL 3 14.816 37.779 19.545 1.00 3.61 ATOM 32 CA VAL 3 14.057 38.454 20.570 1.00 3.61 ATOM 34 CB VAL 3 12.552 38.268 20.359 1.00 3.61 ATOM 36 CG1 VAL 3 11.731 38.954 21.465 1.00 3.61 ATOM 40 CG2 VAL 3 12.150 38.818 18.974 1.00 3.61 ATOM 44 C VAL 3 14.455 37.906 21.918 1.00 3.61 ATOM 45 O VAL 3 14.289 36.715 22.190 1.00 3.61 ATOM 46 N GLN 4 14.963 38.803 22.802 1.00 3.66 ATOM 48 CA GLN 4 15.052 38.584 24.230 1.00 3.66 ATOM 50 CB GLN 4 16.474 38.691 24.835 1.00 3.66 ATOM 53 CG GLN 4 17.482 37.671 24.276 1.00 3.66 ATOM 56 CD GLN 4 17.044 36.241 24.598 1.00 3.66 ATOM 57 OE1 GLN 4 16.630 35.911 25.708 1.00 3.66 ATOM 58 NE2 GLN 4 17.103 35.354 23.575 1.00 3.66 ATOM 61 C GLN 4 14.211 39.687 24.810 1.00 3.66 ATOM 62 O GLN 4 14.518 40.864 24.632 1.00 3.66 ATOM 63 N GLY 5 13.092 39.322 25.477 1.00 4.00 ATOM 65 CA GLY 5 12.102 40.256 25.974 1.00 4.00 ATOM 68 C GLY 5 11.092 40.500 24.874 1.00 4.00 ATOM 69 O GLY 5 11.499 41.021 23.837 1.00 4.00 ATOM 70 N PRO 6 9.799 40.177 24.992 1.00 4.81 ATOM 71 CA PRO 6 8.868 40.211 23.868 1.00 4.81 ATOM 73 CB PRO 6 7.612 39.482 24.386 1.00 4.81 ATOM 76 CG PRO 6 7.658 39.701 25.903 1.00 4.81 ATOM 79 CD PRO 6 9.165 39.657 26.203 1.00 4.81 ATOM 82 C PRO 6 8.534 41.619 23.432 1.00 4.81 ATOM 83 O PRO 6 8.683 42.542 24.233 1.00 4.81 ATOM 84 N TRP 7 8.108 41.785 22.154 1.00 5.87 ATOM 86 CA TRP 7 7.747 43.074 21.599 1.00 5.87 ATOM 88 CB TRP 7 8.730 43.590 20.508 1.00 5.87 ATOM 91 CG TRP 7 10.147 43.855 20.984 1.00 5.87 ATOM 92 CD1 TRP 7 11.200 42.984 21.020 1.00 5.87 ATOM 94 NE1 TRP 7 12.321 43.604 21.527 1.00 5.87 ATOM 96 CE2 TRP 7 12.002 44.912 21.822 1.00 5.87 ATOM 97 CZ2 TRP 7 12.770 45.946 22.356 1.00 5.87 ATOM 99 CH2 TRP 7 12.153 47.193 22.545 1.00 5.87 ATOM 101 CZ3 TRP 7 10.799 47.387 22.225 1.00 5.87 ATOM 103 CE3 TRP 7 10.018 46.339 21.707 1.00 5.87 ATOM 105 CD2 TRP 7 10.638 45.105 21.504 1.00 5.87 ATOM 106 C TRP 7 6.409 42.918 20.911 1.00 5.87 ATOM 107 O TRP 7 6.146 41.866 20.325 1.00 5.87 ATOM 108 N VAL 8 5.544 43.973 20.967 1.00 6.67 ATOM 110 CA VAL 8 4.272 44.066 20.258 1.00 6.67 ATOM 112 CB VAL 8 3.064 43.563 21.079 1.00 6.67 ATOM 114 CG1 VAL 8 1.723 43.708 20.316 1.00 6.67 ATOM 118 CG2 VAL 8 3.250 42.080 21.477 1.00 6.67 ATOM 122 C VAL 8 4.093 45.546 19.911 1.00 6.67 ATOM 123 O VAL 8 4.587 46.414 20.633 1.00 6.67 ATOM 124 N GLY 9 3.385 45.887 18.796 1.00 7.21 ATOM 126 CA GLY 9 3.060 47.266 18.481 1.00 7.21 ATOM 129 C GLY 9 1.910 47.346 17.515 1.00 7.21 ATOM 130 O GLY 9 1.836 46.591 16.545 1.00 7.21 ATOM 131 N SER 10 0.981 48.305 17.760 1.00 7.16 ATOM 133 CA SER 10 -0.173 48.551 16.921 1.00 7.16 ATOM 135 CB SER 10 -1.399 49.080 17.704 1.00 7.16 ATOM 138 OG SER 10 -1.887 48.093 18.605 1.00 7.16 ATOM 140 C SER 10 0.196 49.588 15.899 1.00 7.16 ATOM 141 O SER 10 0.693 50.655 16.252 1.00 7.16 ATOM 142 N SER 11 -0.025 49.282 14.599 1.00 6.68 ATOM 144 CA SER 11 0.459 50.100 13.507 1.00 6.68 ATOM 146 CB SER 11 1.857 49.621 13.008 1.00 6.68 ATOM 149 OG SER 11 2.835 49.714 14.038 1.00 6.68 ATOM 151 C SER 11 -0.532 50.024 12.360 1.00 6.68 ATOM 152 O SER 11 -1.662 49.565 12.523 1.00 6.68 ATOM 153 N TYR 12 -0.135 50.519 11.160 1.00 6.90 ATOM 155 CA TYR 12 -0.967 50.549 9.970 1.00 6.90 ATOM 157 CB TYR 12 -0.706 51.807 9.101 1.00 6.90 ATOM 160 CG TYR 12 -1.108 53.035 9.872 1.00 6.90 ATOM 161 CD1 TYR 12 -0.132 53.874 10.446 1.00 6.90 ATOM 163 CE1 TYR 12 -0.508 55.000 11.191 1.00 6.90 ATOM 165 CZ TYR 12 -1.867 55.300 11.366 1.00 6.90 ATOM 166 OH TYR 12 -2.246 56.441 12.104 1.00 6.90 ATOM 168 CE2 TYR 12 -2.849 54.464 10.813 1.00 6.90 ATOM 170 CD2 TYR 12 -2.469 53.340 10.066 1.00 6.90 ATOM 172 C TYR 12 -0.714 49.332 9.103 1.00 6.90 ATOM 173 O TYR 12 -1.533 48.980 8.256 1.00 6.90 ATOM 174 N VAL 13 0.454 48.688 9.293 1.00 7.26 ATOM 176 CA VAL 13 0.924 47.500 8.632 1.00 7.26 ATOM 178 CB VAL 13 1.947 47.812 7.537 1.00 7.26 ATOM 180 CG1 VAL 13 2.494 46.517 6.900 1.00 7.26 ATOM 184 CG2 VAL 13 1.296 48.707 6.469 1.00 7.26 ATOM 188 C VAL 13 1.658 46.805 9.740 1.00 7.26 ATOM 189 O VAL 13 2.339 47.470 10.516 1.00 7.26 ATOM 190 N ALA 14 1.562 45.464 9.849 1.00 7.40 ATOM 192 CA ALA 14 2.373 44.738 10.794 1.00 7.40 ATOM 194 CB ALA 14 1.580 44.214 11.992 1.00 7.40 ATOM 198 C ALA 14 2.980 43.567 10.084 1.00 7.40 ATOM 199 O ALA 14 2.326 42.557 9.824 1.00 7.40 ATOM 200 N GLU 15 4.281 43.676 9.753 1.00 7.59 ATOM 202 CA GLU 15 5.033 42.593 9.180 1.00 7.59 ATOM 204 CB GLU 15 6.036 43.032 8.089 1.00 7.59 ATOM 207 CG GLU 15 5.374 43.645 6.839 1.00 7.59 ATOM 210 CD GLU 15 6.424 44.058 5.803 1.00 7.59 ATOM 211 OE1 GLU 15 7.648 43.884 6.044 1.00 7.59 ATOM 212 OE2 GLU 15 6.003 44.570 4.734 1.00 7.59 ATOM 213 C GLU 15 5.820 42.004 10.300 1.00 7.59 ATOM 214 O GLU 15 6.466 42.724 11.061 1.00 7.59 ATOM 215 N THR 16 5.743 40.669 10.446 1.00 7.45 ATOM 217 CA THR 16 6.451 39.992 11.497 1.00 7.45 ATOM 219 CB THR 16 5.547 39.676 12.672 1.00 7.45 ATOM 221 CG2 THR 16 6.305 38.979 13.821 1.00 7.45 ATOM 225 OG1 THR 16 4.949 40.863 13.178 1.00 7.45 ATOM 227 C THR 16 6.984 38.755 10.841 1.00 7.45 ATOM 228 O THR 16 6.262 37.773 10.673 1.00 7.45 ATOM 229 N GLY 17 8.277 38.802 10.436 1.00 7.30 ATOM 231 CA GLY 17 8.914 37.736 9.700 1.00 7.30 ATOM 234 C GLY 17 10.334 37.544 10.146 1.00 7.30 ATOM 235 O GLY 17 11.024 38.489 10.533 1.00 7.30 ATOM 236 N GLN 18 10.796 36.267 10.075 1.00 7.52 ATOM 238 CA GLN 18 12.127 35.784 10.395 1.00 7.52 ATOM 240 CB GLN 18 13.205 36.276 9.392 1.00 7.52 ATOM 243 CG GLN 18 12.897 35.796 7.956 1.00 7.52 ATOM 246 CD GLN 18 13.976 36.246 6.975 1.00 7.52 ATOM 247 OE1 GLN 18 14.990 36.836 7.340 1.00 7.52 ATOM 248 NE2 GLN 18 13.751 35.960 5.670 1.00 7.52 ATOM 251 C GLN 18 12.514 36.028 11.831 1.00 7.52 ATOM 252 O GLN 18 13.668 36.322 12.150 1.00 7.52 ATOM 253 N ASN 19 11.520 35.902 12.739 1.00 8.04 ATOM 255 CA ASN 19 11.712 36.158 14.143 1.00 8.04 ATOM 257 CB ASN 19 10.608 37.042 14.780 1.00 8.04 ATOM 260 CG ASN 19 10.664 38.452 14.185 1.00 8.04 ATOM 261 OD1 ASN 19 11.685 39.120 14.308 1.00 8.04 ATOM 262 ND2 ASN 19 9.575 38.952 13.557 1.00 8.04 ATOM 265 C ASN 19 11.920 34.878 14.906 1.00 8.04 ATOM 266 O ASN 19 11.441 33.806 14.542 1.00 8.04 ATOM 267 N TRP 20 12.705 34.984 15.995 1.00 8.97 ATOM 269 CA TRP 20 12.970 33.913 16.921 1.00 8.97 ATOM 271 CB TRP 20 14.355 33.236 16.748 1.00 8.97 ATOM 274 CG TRP 20 14.465 32.354 15.520 1.00 8.97 ATOM 275 CD1 TRP 20 14.985 32.586 14.275 1.00 8.97 ATOM 277 NE1 TRP 20 14.926 31.436 13.515 1.00 8.97 ATOM 279 CE2 TRP 20 14.353 30.436 14.270 1.00 8.97 ATOM 280 CZ2 TRP 20 14.075 29.101 13.977 1.00 8.97 ATOM 282 CH2 TRP 20 13.461 28.322 14.974 1.00 8.97 ATOM 284 CZ3 TRP 20 13.141 28.869 16.229 1.00 8.97 ATOM 286 CE3 TRP 20 13.434 30.208 16.526 1.00 8.97 ATOM 288 CD2 TRP 20 14.035 30.982 15.532 1.00 8.97 ATOM 289 C TRP 20 12.877 34.467 18.300 1.00 8.97 ATOM 290 O TRP 20 13.792 35.119 18.799 1.00 8.97 ATOM 291 N ALA 21 11.742 34.176 18.964 1.00 10.40 ATOM 293 CA ALA 21 11.593 34.404 20.367 1.00 10.40 ATOM 295 CB ALA 21 10.178 34.863 20.774 1.00 10.40 ATOM 299 C ALA 21 11.906 33.100 21.001 1.00 10.40 ATOM 300 O ALA 21 11.371 32.057 20.617 1.00 10.40 ATOM 301 N SER 22 12.760 33.152 22.051 1.00 11.43 ATOM 303 CA SER 22 13.088 32.028 22.909 1.00 11.43 ATOM 305 CB SER 22 13.988 32.451 24.098 1.00 11.43 ATOM 308 OG SER 22 15.249 32.919 23.638 1.00 11.43 ATOM 310 C SER 22 11.823 31.454 23.514 1.00 11.43 ATOM 311 O SER 22 11.747 30.271 23.836 1.00 11.43 ATOM 312 N LEU 23 10.780 32.310 23.626 1.00 11.47 ATOM 314 CA LEU 23 9.445 31.929 23.987 1.00 11.47 ATOM 316 CB LEU 23 8.692 33.159 24.569 1.00 11.47 ATOM 319 CG LEU 23 7.236 32.947 25.054 1.00 11.47 ATOM 321 CD1 LEU 23 7.122 31.923 26.200 1.00 11.47 ATOM 325 CD2 LEU 23 6.587 34.290 25.451 1.00 11.47 ATOM 329 C LEU 23 8.711 31.381 22.780 1.00 11.47 ATOM 330 O LEU 23 8.206 32.102 21.917 1.00 11.47 ATOM 331 N ALA 24 8.588 30.039 22.733 1.00 10.65 ATOM 333 CA ALA 24 7.633 29.369 21.891 1.00 10.65 ATOM 335 CB ALA 24 7.899 27.861 21.748 1.00 10.65 ATOM 339 C ALA 24 6.289 29.590 22.533 1.00 10.65 ATOM 340 O ALA 24 6.178 29.705 23.752 1.00 10.65 ATOM 341 N ALA 25 5.260 29.712 21.687 1.00 9.23 ATOM 343 CA ALA 25 3.915 30.136 21.982 1.00 9.23 ATOM 345 CB ALA 25 3.209 29.414 23.154 1.00 9.23 ATOM 349 C ALA 25 3.776 31.630 22.121 1.00 9.23 ATOM 350 O ALA 25 2.768 32.107 22.637 1.00 9.23 ATOM 351 N ASN 26 4.752 32.416 21.605 1.00 7.95 ATOM 353 CA ASN 26 4.652 33.854 21.543 1.00 7.95 ATOM 355 CB ASN 26 6.057 34.521 21.492 1.00 7.95 ATOM 358 CG ASN 26 6.003 36.050 21.613 1.00 7.95 ATOM 359 OD1 ASN 26 5.046 36.624 22.124 1.00 7.95 ATOM 360 ND2 ASN 26 7.071 36.736 21.136 1.00 7.95 ATOM 363 C ASN 26 3.903 34.188 20.285 1.00 7.95 ATOM 364 O ASN 26 4.286 33.770 19.196 1.00 7.95 ATOM 365 N GLU 27 2.821 34.976 20.427 1.00 7.77 ATOM 367 CA GLU 27 1.946 35.413 19.374 1.00 7.77 ATOM 369 CB GLU 27 0.811 36.254 20.000 1.00 7.77 ATOM 372 CG GLU 27 -0.137 35.399 20.868 1.00 7.77 ATOM 375 CD GLU 27 -1.167 36.247 21.609 1.00 7.77 ATOM 376 OE1 GLU 27 -1.046 37.499 21.619 1.00 7.77 ATOM 377 OE2 GLU 27 -2.111 35.647 22.184 1.00 7.77 ATOM 378 C GLU 27 2.707 36.272 18.394 1.00 7.77 ATOM 379 O GLU 27 3.545 37.091 18.765 1.00 7.77 ATOM 380 N LEU 28 2.404 36.083 17.098 1.00 8.10 ATOM 382 CA LEU 28 2.815 36.896 15.979 1.00 8.10 ATOM 384 CB LEU 28 1.984 36.335 14.798 1.00 8.10 ATOM 387 CG LEU 28 2.102 37.011 13.437 1.00 8.10 ATOM 389 CD1 LEU 28 3.499 36.782 12.866 1.00 8.10 ATOM 393 CD2 LEU 28 0.935 36.572 12.539 1.00 8.10 ATOM 397 C LEU 28 2.344 38.317 16.208 1.00 8.10 ATOM 398 O LEU 28 3.146 39.239 16.361 1.00 8.10 ATOM 399 N ARG 29 1.001 38.453 16.309 1.00 8.39 ATOM 401 CA ARG 29 0.283 39.615 16.756 1.00 8.39 ATOM 403 CB ARG 29 0.401 40.843 15.804 1.00 8.39 ATOM 406 CG ARG 29 -0.219 42.165 16.300 1.00 8.39 ATOM 409 CD ARG 29 0.114 43.352 15.392 1.00 8.39 ATOM 412 NE ARG 29 -0.511 43.137 14.044 1.00 8.39 ATOM 414 CZ ARG 29 -1.778 43.505 13.717 1.00 8.39 ATOM 415 NH1 ARG 29 -2.601 44.111 14.602 1.00 8.39 ATOM 418 NH2 ARG 29 -2.221 43.284 12.457 1.00 8.39 ATOM 421 C ARG 29 -1.148 39.108 16.893 1.00 8.39 ATOM 422 O ARG 29 -1.439 38.011 16.409 1.00 8.39 ATOM 423 N VAL 30 -2.052 39.869 17.582 1.00 8.84 ATOM 425 CA VAL 30 -3.475 39.605 17.743 1.00 8.84 ATOM 427 CB VAL 30 -3.860 38.625 18.875 1.00 8.84 ATOM 429 CG1 VAL 30 -3.319 37.202 18.619 1.00 8.84 ATOM 433 CG2 VAL 30 -3.377 39.143 20.248 1.00 8.84 ATOM 437 C VAL 30 -4.173 40.948 17.936 1.00 8.84 ATOM 438 O VAL 30 -3.583 42.002 17.686 1.00 8.84 ATOM 439 N THR 31 -5.465 40.918 18.378 1.00 8.68 ATOM 441 CA THR 31 -6.300 42.026 18.810 1.00 8.68 ATOM 443 CB THR 31 -5.683 42.973 19.850 1.00 8.68 ATOM 445 CG2 THR 31 -6.705 44.048 20.298 1.00 8.68 ATOM 449 OG1 THR 31 -5.305 42.242 21.009 1.00 8.68 ATOM 451 C THR 31 -6.859 42.775 17.637 1.00 8.68 ATOM 452 O THR 31 -8.055 42.682 17.359 1.00 8.68 ATOM 453 N GLU 32 -6.008 43.540 16.913 1.00 8.47 ATOM 455 CA GLU 32 -6.469 44.429 15.883 1.00 8.47 ATOM 457 CB GLU 32 -5.672 45.739 15.840 1.00 8.47 ATOM 460 CG GLU 32 -5.763 46.501 17.186 1.00 8.47 ATOM 463 CD GLU 32 -4.954 47.800 17.198 1.00 8.47 ATOM 464 OE1 GLU 32 -4.335 48.163 16.162 1.00 8.47 ATOM 465 OE2 GLU 32 -4.942 48.448 18.279 1.00 8.47 ATOM 466 C GLU 32 -6.535 43.661 14.592 1.00 8.47 ATOM 467 O GLU 32 -5.650 43.682 13.733 1.00 8.47 ATOM 468 N ARG 33 -7.672 42.944 14.482 1.00 8.59 ATOM 470 CA ARG 33 -8.071 42.057 13.428 1.00 8.59 ATOM 472 CB ARG 33 -9.477 41.465 13.750 1.00 8.59 ATOM 475 CG ARG 33 -10.061 40.410 12.796 1.00 8.59 ATOM 478 CD ARG 33 -9.344 39.052 12.850 1.00 8.59 ATOM 481 NE ARG 33 -10.069 38.128 11.922 1.00 8.59 ATOM 483 CZ ARG 33 -9.799 36.799 11.843 1.00 8.59 ATOM 484 NH1 ARG 33 -10.303 36.095 10.806 1.00 8.59 ATOM 487 NH2 ARG 33 -9.076 36.152 12.785 1.00 8.59 ATOM 490 C ARG 33 -8.063 42.749 12.071 1.00 8.59 ATOM 491 O ARG 33 -7.596 42.103 11.131 1.00 8.59 ATOM 492 N PRO 34 -8.508 44.008 11.861 1.00 8.93 ATOM 493 CA PRO 34 -8.504 44.604 10.536 1.00 8.93 ATOM 495 CB PRO 34 -9.376 45.874 10.653 1.00 8.93 ATOM 498 CG PRO 34 -10.260 45.619 11.873 1.00 8.93 ATOM 501 CD PRO 34 -9.334 44.810 12.776 1.00 8.93 ATOM 504 C PRO 34 -7.162 45.003 9.972 1.00 8.93 ATOM 505 O PRO 34 -7.124 45.266 8.772 1.00 8.93 ATOM 506 N PHE 35 -6.064 45.127 10.762 1.00 9.87 ATOM 508 CA PHE 35 -4.853 45.683 10.181 1.00 9.87 ATOM 510 CB PHE 35 -3.883 46.383 11.161 1.00 9.87 ATOM 513 CG PHE 35 -4.475 47.712 11.552 1.00 9.87 ATOM 514 CD1 PHE 35 -5.085 47.884 12.798 1.00 9.87 ATOM 516 CE1 PHE 35 -5.666 49.108 13.164 1.00 9.87 ATOM 518 CZ PHE 35 -5.635 50.186 12.269 1.00 9.87 ATOM 520 CE2 PHE 35 -5.027 50.035 11.014 1.00 9.87 ATOM 522 CD2 PHE 35 -4.460 48.800 10.655 1.00 9.87 ATOM 524 C PHE 35 -4.117 44.681 9.331 1.00 9.87 ATOM 525 O PHE 35 -4.048 43.487 9.625 1.00 9.87 ATOM 526 N TRP 36 -3.557 45.194 8.209 1.00 10.58 ATOM 528 CA TRP 36 -2.865 44.424 7.204 1.00 10.58 ATOM 530 CB TRP 36 -2.443 45.285 5.988 1.00 10.58 ATOM 533 CG TRP 36 -3.581 45.819 5.122 1.00 10.58 ATOM 534 CD1 TRP 36 -4.110 47.082 5.135 1.00 10.58 ATOM 536 NE1 TRP 36 -4.950 47.265 4.059 1.00 10.58 ATOM 538 CE2 TRP 36 -4.896 46.148 3.262 1.00 10.58 ATOM 539 CZ2 TRP 36 -5.498 45.864 2.039 1.00 10.58 ATOM 541 CH2 TRP 36 -5.210 44.634 1.429 1.00 10.58 ATOM 543 CZ3 TRP 36 -4.355 43.706 2.050 1.00 10.58 ATOM 545 CE3 TRP 36 -3.765 43.986 3.295 1.00 10.58 ATOM 547 CD2 TRP 36 -4.039 45.215 3.890 1.00 10.58 ATOM 548 C TRP 36 -1.628 43.811 7.812 1.00 10.58 ATOM 549 O TRP 36 -0.911 44.463 8.566 1.00 10.58 ATOM 550 N ILE 37 -1.412 42.508 7.547 1.00 10.53 ATOM 552 CA ILE 37 -0.473 41.720 8.309 1.00 10.53 ATOM 554 CB ILE 37 -1.168 41.002 9.482 1.00 10.53 ATOM 556 CG2 ILE 37 -2.308 40.079 8.992 1.00 10.53 ATOM 560 CG1 ILE 37 -0.198 40.284 10.458 1.00 10.53 ATOM 563 CD1 ILE 37 -0.848 39.826 11.769 1.00 10.53 ATOM 567 C ILE 37 0.256 40.767 7.394 1.00 10.53 ATOM 568 O ILE 37 -0.308 40.274 6.418 1.00 10.53 ATOM 569 N SER 38 1.555 40.512 7.694 1.00 10.25 ATOM 571 CA SER 38 2.378 39.526 7.006 1.00 10.25 ATOM 573 CB SER 38 3.448 40.174 6.100 1.00 10.25 ATOM 576 OG SER 38 2.828 40.961 5.087 1.00 10.25 ATOM 578 C SER 38 3.098 38.613 8.012 1.00 10.25 ATOM 579 O SER 38 3.617 39.126 9.005 1.00 10.25 ATOM 580 N SER 39 3.122 37.255 7.742 1.00 9.55 ATOM 582 CA SER 39 3.617 36.120 8.563 1.00 9.55 ATOM 584 CB SER 39 2.535 35.718 9.591 1.00 9.55 ATOM 587 OG SER 39 2.961 34.700 10.492 1.00 9.55 ATOM 589 C SER 39 3.877 34.842 7.681 1.00 9.55 ATOM 590 O SER 39 3.469 34.881 6.527 1.00 9.55 ATOM 591 N PHE 40 4.518 33.698 8.188 1.00 8.92 ATOM 593 CA PHE 40 4.689 32.381 7.512 1.00 8.92 ATOM 595 CB PHE 40 5.619 32.476 6.247 1.00 8.92 ATOM 598 CG PHE 40 5.789 31.167 5.496 1.00 8.92 ATOM 599 CD1 PHE 40 4.801 30.708 4.607 1.00 8.92 ATOM 601 CE1 PHE 40 4.929 29.469 3.956 1.00 8.92 ATOM 603 CZ PHE 40 6.068 28.681 4.175 1.00 8.92 ATOM 605 CE2 PHE 40 7.075 29.131 5.040 1.00 8.92 ATOM 607 CD2 PHE 40 6.933 30.365 5.696 1.00 8.92 ATOM 609 C PHE 40 5.272 31.273 8.438 1.00 8.92 ATOM 610 O PHE 40 6.228 31.534 9.166 1.00 8.92 ATOM 611 N ILE 41 4.758 29.990 8.386 1.00 8.61 ATOM 613 CA ILE 41 5.288 28.850 9.150 1.00 8.61 ATOM 615 CB ILE 41 4.819 28.901 10.618 1.00 8.61 ATOM 617 CG2 ILE 41 3.280 28.779 10.713 1.00 8.61 ATOM 621 CG1 ILE 41 5.566 27.922 11.560 1.00 8.61 ATOM 624 CD1 ILE 41 5.362 28.210 13.053 1.00 8.61 ATOM 628 C ILE 41 4.908 27.539 8.471 1.00 8.61 ATOM 629 O ILE 41 3.997 27.499 7.650 1.00 8.61 ATOM 630 N GLY 42 5.589 26.406 8.783 1.00 8.05 ATOM 632 CA GLY 42 5.192 25.127 8.239 1.00 8.05 ATOM 635 C GLY 42 5.745 24.057 9.096 1.00 8.05 ATOM 636 O GLY 42 6.713 24.264 9.824 1.00 8.05 ATOM 637 N ARG 43 5.156 22.843 9.007 1.00 7.59 ATOM 639 CA ARG 43 5.816 21.706 9.568 1.00 7.59 ATOM 641 CB ARG 43 5.084 20.978 10.716 1.00 7.59 ATOM 644 CG ARG 43 6.012 19.995 11.444 1.00 7.59 ATOM 647 CD ARG 43 5.383 19.294 12.646 1.00 7.59 ATOM 650 NE ARG 43 6.370 18.342 13.248 1.00 7.59 ATOM 652 CZ ARG 43 6.016 17.434 14.196 1.00 7.59 ATOM 653 NH1 ARG 43 4.760 17.361 14.695 1.00 7.59 ATOM 656 NH2 ARG 43 6.926 16.540 14.641 1.00 7.59 ATOM 659 C ARG 43 6.096 20.921 8.338 1.00 7.59 ATOM 660 O ARG 43 5.253 20.193 7.809 1.00 7.59 ATOM 661 N SER 44 7.343 21.154 7.869 1.00 7.28 ATOM 663 CA SER 44 7.996 20.554 6.733 1.00 7.28 ATOM 665 CB SER 44 9.103 21.455 6.138 1.00 7.28 ATOM 668 OG SER 44 8.543 22.662 5.638 1.00 7.28 ATOM 670 C SER 44 8.646 19.280 7.191 1.00 7.28 ATOM 671 O SER 44 8.972 18.412 6.386 1.00 7.28 ATOM 672 N LYS 45 8.762 19.105 8.530 1.00 7.07 ATOM 674 CA LYS 45 8.953 17.818 9.162 1.00 7.07 ATOM 676 CB LYS 45 9.135 17.953 10.690 1.00 7.07 ATOM 679 CG LYS 45 10.430 18.632 11.131 1.00 7.07 ATOM 682 CD LYS 45 10.491 18.774 12.659 1.00 7.07 ATOM 685 CE LYS 45 11.766 19.460 13.172 1.00 7.07 ATOM 688 NZ LYS 45 11.725 19.620 14.641 1.00 7.07 ATOM 692 C LYS 45 7.715 16.986 8.934 1.00 7.07 ATOM 693 O LYS 45 7.799 15.761 8.866 1.00 7.07 TER END