####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS208_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS208_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 5 - 22 4.96 16.27 LONGEST_CONTINUOUS_SEGMENT: 18 6 - 23 4.99 16.20 LCS_AVERAGE: 37.50 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 27 - 35 2.00 16.07 LONGEST_CONTINUOUS_SEGMENT: 9 28 - 36 1.55 14.82 LCS_AVERAGE: 16.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 5 - 9 0.75 16.75 LONGEST_CONTINUOUS_SEGMENT: 5 21 - 25 0.67 20.33 LCS_AVERAGE: 9.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 4 4 4 5 5 7 9 11 14 16 16 17 18 19 19 20 20 23 24 26 LCS_GDT V 3 V 3 4 6 9 4 4 4 5 5 6 6 6 14 16 16 17 18 19 19 20 20 23 25 26 LCS_GDT Q 4 Q 4 4 6 13 4 4 4 5 5 7 9 11 14 16 16 17 18 19 19 21 23 24 25 26 LCS_GDT G 5 G 5 5 6 18 4 4 5 5 5 7 9 11 14 16 16 17 18 19 20 21 23 24 25 26 LCS_GDT P 6 P 6 5 6 18 3 4 5 8 8 9 9 11 14 16 16 17 18 19 20 21 23 24 25 26 LCS_GDT W 7 W 7 5 6 18 3 4 5 5 5 7 9 11 14 16 16 17 18 19 20 21 23 24 25 27 LCS_GDT V 8 V 8 5 6 18 3 4 6 6 7 7 8 8 14 16 16 17 18 19 20 21 23 24 26 27 LCS_GDT G 9 G 9 5 6 18 3 4 6 6 7 7 7 9 11 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT S 10 S 10 3 4 18 3 3 4 4 4 5 6 8 10 11 14 17 18 19 20 21 23 24 26 27 LCS_GDT S 11 S 11 3 4 18 3 3 4 4 4 5 6 8 10 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT Y 12 Y 12 3 4 18 3 3 4 4 4 6 7 8 10 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT V 13 V 13 3 3 18 3 3 3 3 3 6 7 8 10 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT A 14 A 14 3 7 18 3 3 3 5 6 7 8 9 11 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT E 15 E 15 4 8 18 3 4 5 7 7 8 8 9 10 14 15 17 18 19 20 21 22 23 26 27 LCS_GDT T 16 T 16 4 8 18 3 4 5 7 7 8 8 9 10 14 15 17 18 19 20 21 22 24 26 27 LCS_GDT G 17 G 17 4 8 18 3 4 5 7 7 8 8 9 10 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT Q 18 Q 18 4 8 18 3 4 4 7 7 8 8 9 10 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT N 19 N 19 4 8 18 3 4 5 7 7 8 8 9 11 14 15 17 18 19 20 21 23 24 26 27 LCS_GDT W 20 W 20 4 8 18 3 5 5 7 7 8 10 10 13 16 16 17 18 19 20 21 23 24 25 26 LCS_GDT A 21 A 21 5 8 18 4 5 5 7 7 8 10 11 14 16 16 17 18 19 20 21 23 24 25 26 LCS_GDT S 22 S 22 5 8 18 4 5 5 6 7 8 10 10 11 16 16 17 18 19 20 21 23 24 25 26 LCS_GDT L 23 L 23 5 7 18 4 5 5 6 7 8 10 10 14 16 16 17 18 19 20 21 23 24 26 27 LCS_GDT A 24 A 24 5 7 17 4 5 6 6 7 8 10 11 14 16 16 17 18 19 20 21 23 24 26 27 LCS_GDT A 25 A 25 5 7 17 3 5 5 6 7 8 10 11 14 16 16 17 18 19 20 21 23 24 26 27 LCS_GDT N 26 N 26 4 7 17 3 5 6 6 7 8 10 11 14 16 16 17 18 19 20 21 23 24 26 27 LCS_GDT E 27 E 27 4 9 17 3 5 6 6 7 10 10 11 14 16 16 17 18 19 19 21 23 24 26 27 LCS_GDT L 28 L 28 4 9 17 3 5 7 8 9 10 10 11 14 16 16 17 18 19 19 21 23 24 26 27 LCS_GDT R 29 R 29 4 9 17 3 3 7 8 9 10 10 11 12 13 14 17 18 19 19 20 22 23 26 27 LCS_GDT V 30 V 30 4 9 17 3 3 4 5 9 10 10 11 12 13 14 15 18 19 19 20 22 23 26 27 LCS_GDT T 31 T 31 4 9 17 3 3 5 8 9 10 10 11 12 13 13 15 17 17 18 19 22 23 26 27 LCS_GDT E 32 E 32 4 9 17 3 3 7 8 9 10 10 11 12 13 13 15 17 17 18 19 22 23 26 27 LCS_GDT R 33 R 33 4 9 17 3 4 7 8 9 10 10 11 12 13 13 15 17 17 18 19 21 23 26 27 LCS_GDT P 34 P 34 4 9 17 3 4 7 8 9 10 10 11 12 13 13 15 17 17 18 19 21 23 26 27 LCS_GDT F 35 F 35 4 9 17 3 4 7 8 9 10 10 11 12 13 13 15 17 17 18 19 21 23 26 27 LCS_GDT W 36 W 36 4 9 17 3 4 7 8 9 10 10 11 12 13 13 15 17 17 18 19 21 23 26 27 LCS_GDT I 37 I 37 4 7 17 3 3 5 6 7 8 10 11 12 13 13 15 16 16 17 17 18 20 22 25 LCS_GDT S 38 S 38 3 8 17 3 3 5 8 8 9 9 11 12 13 13 15 16 16 17 17 18 20 21 25 LCS_GDT S 39 S 39 4 8 14 3 4 5 8 8 9 9 11 11 12 12 13 15 16 16 17 18 19 20 20 LCS_GDT F 40 F 40 4 8 14 3 4 5 8 8 9 9 11 11 12 12 13 15 16 16 17 18 19 20 20 LCS_GDT I 41 I 41 4 8 14 3 4 5 8 8 9 9 11 11 12 12 13 15 16 16 17 18 19 23 25 LCS_GDT G 42 G 42 4 8 14 3 4 4 8 8 9 9 11 11 12 12 13 15 16 16 16 17 17 20 22 LCS_GDT R 43 R 43 3 8 14 3 3 4 4 8 9 9 11 11 12 12 13 15 16 16 16 17 17 18 18 LCS_GDT S 44 S 44 3 8 14 3 3 4 8 8 9 9 11 11 12 12 13 15 16 16 16 17 17 18 18 LCS_GDT K 45 K 45 3 8 14 3 3 5 8 8 9 9 11 11 12 12 13 15 16 16 16 17 17 18 18 LCS_AVERAGE LCS_A: 21.11 ( 9.14 16.68 37.50 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 8 9 10 10 11 14 16 16 17 18 19 20 21 23 24 26 27 GDT PERCENT_AT 9.09 11.36 15.91 18.18 20.45 22.73 22.73 25.00 31.82 36.36 36.36 38.64 40.91 43.18 45.45 47.73 52.27 54.55 59.09 61.36 GDT RMS_LOCAL 0.08 0.67 1.10 1.23 1.55 2.01 2.01 2.42 3.24 3.50 3.50 3.82 4.20 4.52 5.36 5.62 6.36 6.52 7.19 7.39 GDT RMS_ALL_AT 20.05 20.33 14.61 14.80 14.82 15.46 15.46 16.16 14.94 15.16 15.16 14.96 14.29 14.07 15.35 14.95 13.23 13.35 12.83 12.68 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.770 0 0.342 0.393 9.859 0.000 0.000 - LGA V 3 V 3 7.892 0 0.320 0.375 9.818 0.000 0.000 7.383 LGA Q 4 Q 4 11.998 0 0.057 1.354 18.743 0.000 0.000 16.828 LGA G 5 G 5 16.260 0 0.684 0.684 19.717 0.000 0.000 - LGA P 6 P 6 16.975 0 0.045 0.283 17.952 0.000 0.000 16.981 LGA W 7 W 7 18.304 0 0.063 0.395 19.169 0.000 0.000 19.169 LGA V 8 V 8 17.919 0 0.052 0.342 18.283 0.000 0.000 16.946 LGA G 9 G 9 19.096 0 0.543 0.543 20.907 0.000 0.000 - LGA S 10 S 10 24.792 0 0.086 0.492 26.839 0.000 0.000 26.420 LGA S 11 S 11 26.844 0 0.025 0.610 29.712 0.000 0.000 29.712 LGA Y 12 Y 12 21.197 0 0.423 0.970 23.216 0.000 0.000 12.349 LGA V 13 V 13 22.687 0 0.570 1.414 25.204 0.000 0.000 25.204 LGA A 14 A 14 22.914 0 0.233 0.236 23.255 0.000 0.000 - LGA E 15 E 15 25.387 0 0.349 1.094 31.017 0.000 0.000 30.173 LGA T 16 T 16 20.211 0 0.662 1.348 21.661 0.000 0.000 18.629 LGA G 17 G 17 19.245 0 0.623 0.623 19.798 0.000 0.000 - LGA Q 18 Q 18 17.289 0 0.032 1.103 18.140 0.000 0.000 16.006 LGA N 19 N 19 16.953 0 0.628 1.119 19.564 0.000 0.000 18.887 LGA W 20 W 20 15.060 0 0.380 0.223 23.480 0.000 0.000 23.480 LGA A 21 A 21 14.235 0 0.373 0.355 16.069 0.000 0.000 - LGA S 22 S 22 13.591 0 0.030 0.560 15.273 0.000 0.000 15.273 LGA L 23 L 23 6.274 0 0.195 1.214 8.885 7.273 3.636 8.333 LGA A 24 A 24 6.857 0 0.156 0.164 8.701 0.000 0.000 - LGA A 25 A 25 10.708 0 0.369 0.351 12.787 0.000 0.000 - LGA N 26 N 26 8.572 0 0.075 0.771 13.807 0.000 0.000 13.639 LGA E 27 E 27 3.341 0 0.369 1.223 6.724 26.818 13.939 6.724 LGA L 28 L 28 2.849 0 0.654 1.407 8.334 25.909 12.955 5.736 LGA R 29 R 29 0.252 0 0.629 1.536 7.730 73.182 35.207 6.306 LGA V 30 V 30 3.021 0 0.068 0.091 7.170 40.000 22.857 6.103 LGA T 31 T 31 1.354 0 0.541 0.916 5.814 74.091 44.935 5.342 LGA E 32 E 32 1.281 0 0.343 1.184 3.568 53.636 47.071 2.682 LGA R 33 R 33 1.981 0 0.148 1.016 11.334 39.545 14.545 10.895 LGA P 34 P 34 0.761 0 0.180 0.235 2.387 62.727 54.026 2.387 LGA F 35 F 35 1.614 0 0.046 1.172 10.104 62.273 26.281 10.104 LGA W 36 W 36 2.820 0 0.668 1.411 11.638 25.909 7.403 11.431 LGA I 37 I 37 4.145 0 0.627 1.381 6.387 11.364 5.909 6.387 LGA S 38 S 38 5.011 0 0.361 0.359 9.028 1.364 3.030 4.722 LGA S 39 S 39 11.608 0 0.131 0.634 15.525 0.000 0.000 13.646 LGA F 40 F 40 13.626 0 0.633 1.172 14.825 0.000 0.000 14.647 LGA I 41 I 41 15.618 0 0.399 1.529 18.035 0.000 0.000 14.102 LGA G 42 G 42 22.883 0 0.654 0.654 24.681 0.000 0.000 - LGA R 43 R 43 26.490 0 0.647 1.021 29.013 0.000 0.000 26.766 LGA S 44 S 44 30.665 0 0.220 0.663 31.904 0.000 0.000 31.904 LGA K 45 K 45 33.332 0 0.072 0.746 39.502 0.000 0.000 39.502 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.161 11.098 12.623 11.457 6.632 1.922 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.42 25.568 24.456 0.437 LGA_LOCAL RMSD: 2.415 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.162 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.161 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.850118 * X + 0.076243 * Y + -0.521044 * Z + 40.654327 Y_new = -0.521701 * X + -0.012615 * Y + -0.853035 * Z + -56.122513 Z_new = -0.071611 * X + 0.997010 * Y + 0.029052 * Z + -5.233832 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.550418 0.071672 1.541666 [DEG: -31.5366 4.1065 88.3309 ] ZXZ: -0.548332 1.541740 -0.071702 [DEG: -31.4171 88.3352 -4.1082 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS208_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS208_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.42 24.456 11.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS208_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 REFINED PARENT N/A ATOM 9 N ALA 2 5.483 40.609 8.590 1.00 10.30 ATOM 10 CA ALA 2 4.841 40.148 9.833 1.00 10.30 ATOM 11 C ALA 2 3.309 40.333 9.833 1.00 10.30 ATOM 12 O ALA 2 2.783 41.300 10.384 1.00 10.30 ATOM 13 CB ALA 2 5.510 40.875 11.007 1.00 10.50 ATOM 14 N VAL 3 2.572 39.419 9.198 1.00 10.00 ATOM 15 CA VAL 3 1.130 39.585 8.906 1.00 10.00 ATOM 16 C VAL 3 0.215 39.176 10.080 1.00 10.00 ATOM 17 O VAL 3 -0.503 38.181 10.041 1.00 10.00 ATOM 18 CB VAL 3 0.811 38.973 7.522 1.00 9.90 ATOM 19 CG1 VAL 3 -0.678 38.987 7.156 1.00 9.90 ATOM 20 CG2 VAL 3 1.566 39.770 6.446 1.00 9.90 ATOM 21 N GLN 4 0.265 39.953 11.167 1.00 10.40 ATOM 22 CA GLN 4 -0.594 39.831 12.360 1.00 10.40 ATOM 23 C GLN 4 -2.061 40.253 12.091 1.00 10.40 ATOM 24 O GLN 4 -2.331 41.103 11.243 1.00 10.40 ATOM 25 CB GLN 4 0.064 40.657 13.491 1.00 10.90 ATOM 26 CG GLN 4 -0.744 40.898 14.782 1.00 10.90 ATOM 27 CD GLN 4 -1.128 39.637 15.556 1.00 10.90 ATOM 28 OE1 GLN 4 -0.335 38.746 15.801 1.00 10.90 ATOM 29 NE2 GLN 4 -2.367 39.522 15.977 1.00 10.90 ATOM 30 N GLY 5 -3.008 39.686 12.857 1.00 10.80 ATOM 31 CA GLY 5 -4.426 40.075 12.878 1.00 10.80 ATOM 32 C GLY 5 -5.383 39.602 11.761 1.00 10.80 ATOM 33 O GLY 5 -6.434 40.241 11.649 1.00 10.80 ATOM 34 N PRO 6 -5.142 38.561 10.924 1.00 10.80 ATOM 35 CA PRO 6 -6.020 38.323 9.768 1.00 10.80 ATOM 36 C PRO 6 -7.209 37.380 10.026 1.00 10.80 ATOM 37 O PRO 6 -8.187 37.410 9.282 1.00 10.80 ATOM 38 CB PRO 6 -5.094 37.773 8.681 1.00 11.00 ATOM 39 CG PRO 6 -3.683 37.786 9.259 1.00 11.00 ATOM 40 CD PRO 6 -3.973 37.700 10.742 1.00 11.00 ATOM 41 N TRP 7 -7.136 36.548 11.071 1.00 8.40 ATOM 42 CA TRP 7 -8.157 35.554 11.444 1.00 8.40 ATOM 43 C TRP 7 -8.886 36.062 12.698 1.00 8.40 ATOM 44 O TRP 7 -8.709 35.552 13.802 1.00 8.40 ATOM 45 CB TRP 7 -7.497 34.176 11.578 1.00 7.60 ATOM 46 CG TRP 7 -7.112 33.553 10.266 1.00 7.60 ATOM 47 CD1 TRP 7 -6.134 33.971 9.428 1.00 7.60 ATOM 48 CD2 TRP 7 -7.791 32.473 9.557 1.00 7.60 ATOM 49 NE1 TRP 7 -6.146 33.208 8.275 1.00 7.60 ATOM 50 CE2 TRP 7 -7.170 32.289 8.288 1.00 7.60 ATOM 51 CE3 TRP 7 -8.884 31.637 9.858 1.00 7.60 ATOM 52 CZ2 TRP 7 -7.623 31.345 7.358 1.00 7.60 ATOM 53 CZ3 TRP 7 -9.376 30.721 8.910 1.00 7.60 ATOM 54 CH2 TRP 7 -8.757 30.576 7.660 1.00 7.60 ATOM 55 N VAL 8 -9.663 37.129 12.484 1.00 7.90 ATOM 56 CA VAL 8 -10.244 38.041 13.495 1.00 7.90 ATOM 57 C VAL 8 -10.932 37.383 14.700 1.00 7.90 ATOM 58 O VAL 8 -10.785 37.868 15.820 1.00 7.90 ATOM 59 CB VAL 8 -11.225 39.046 12.848 1.00 8.80 ATOM 60 CG1 VAL 8 -11.308 40.324 13.692 1.00 8.80 ATOM 61 CG2 VAL 8 -10.855 39.465 11.415 1.00 8.80 ATOM 62 N GLY 9 -11.701 36.310 14.503 1.00 5.60 ATOM 63 CA GLY 9 -12.373 35.573 15.580 1.00 5.60 ATOM 64 C GLY 9 -13.186 36.476 16.514 1.00 5.60 ATOM 65 O GLY 9 -12.826 36.656 17.677 1.00 5.60 ATOM 66 N SER 10 -14.254 37.098 16.004 1.00 6.00 ATOM 67 CA SER 10 -14.993 38.149 16.737 1.00 6.00 ATOM 68 C SER 10 -15.850 37.636 17.917 1.00 6.00 ATOM 69 O SER 10 -16.324 38.441 18.717 1.00 6.00 ATOM 70 CB SER 10 -15.870 38.969 15.780 1.00 6.80 ATOM 71 OG SER 10 -15.222 39.207 14.538 1.00 6.80 ATOM 72 N SER 11 -16.036 36.311 18.043 1.00 4.80 ATOM 73 CA SER 11 -16.644 35.608 19.205 1.00 4.80 ATOM 74 C SER 11 -16.066 34.191 19.390 1.00 4.80 ATOM 75 O SER 11 -15.744 33.800 20.508 1.00 4.80 ATOM 76 CB SER 11 -18.177 35.546 19.097 1.00 5.30 ATOM 77 OG SER 11 -18.763 36.812 19.362 1.00 5.30 ATOM 78 N TYR 12 -15.943 33.437 18.283 1.00 4.60 ATOM 79 CA TYR 12 -15.193 32.173 18.112 1.00 4.60 ATOM 80 C TYR 12 -15.120 31.184 19.305 1.00 4.60 ATOM 81 O TYR 12 -14.029 30.789 19.708 1.00 4.60 ATOM 82 CB TYR 12 -13.797 32.530 17.557 1.00 5.00 ATOM 83 CG TYR 12 -13.119 31.409 16.792 1.00 5.00 ATOM 84 CD1 TYR 12 -13.592 31.092 15.511 1.00 5.00 ATOM 85 CD2 TYR 12 -12.021 30.708 17.321 1.00 5.00 ATOM 86 CE1 TYR 12 -12.959 30.102 14.733 1.00 5.00 ATOM 87 CE2 TYR 12 -11.383 29.713 16.554 1.00 5.00 ATOM 88 CZ TYR 12 -11.835 29.422 15.250 1.00 5.00 ATOM 89 OH TYR 12 -11.186 28.501 14.486 1.00 5.00 ATOM 90 N VAL 13 -16.255 30.737 19.870 1.00 6.20 ATOM 91 CA VAL 13 -16.243 29.785 21.013 1.00 6.20 ATOM 92 C VAL 13 -15.755 28.387 20.583 1.00 6.20 ATOM 93 O VAL 13 -16.477 27.622 19.955 1.00 6.20 ATOM 94 CB VAL 13 -17.581 29.759 21.796 1.00 7.00 ATOM 95 CG1 VAL 13 -17.955 31.166 22.280 1.00 7.00 ATOM 96 CG2 VAL 13 -18.799 29.192 21.058 1.00 7.00 ATOM 97 N ALA 14 -14.507 28.029 20.901 1.00 6.70 ATOM 98 CA ALA 14 -13.858 26.846 20.310 1.00 6.70 ATOM 99 C ALA 14 -14.166 25.456 20.937 1.00 6.70 ATOM 100 O ALA 14 -13.622 24.464 20.470 1.00 6.70 ATOM 101 CB ALA 14 -12.368 27.166 20.152 1.00 6.40 ATOM 102 N GLU 15 -14.975 25.368 22.005 1.00 9.30 ATOM 103 CA GLU 15 -15.636 24.146 22.552 1.00 9.30 ATOM 104 C GLU 15 -14.899 22.765 22.536 1.00 9.30 ATOM 105 O GLU 15 -15.540 21.712 22.456 1.00 9.30 ATOM 106 CB GLU 15 -17.058 24.076 21.939 1.00 10.40 ATOM 107 CG GLU 15 -18.040 25.059 22.605 1.00 10.40 ATOM 108 CD GLU 15 -18.552 24.616 23.997 1.00 10.40 ATOM 109 OE1 GLU 15 -18.167 23.538 24.512 1.00 10.40 ATOM 110 OE2 GLU 15 -19.366 25.363 24.593 1.00 10.40 ATOM 111 N THR 16 -13.565 22.725 22.654 1.00 9.60 ATOM 112 CA THR 16 -12.771 21.477 22.782 1.00 9.60 ATOM 113 C THR 16 -12.459 21.131 24.253 1.00 9.60 ATOM 114 O THR 16 -12.982 21.765 25.178 1.00 9.60 ATOM 115 CB THR 16 -11.513 21.541 21.891 1.00 9.60 ATOM 116 OG1 THR 16 -11.030 20.230 21.671 1.00 9.60 ATOM 117 CG2 THR 16 -10.360 22.345 22.495 1.00 9.60 ATOM 118 N GLY 17 -11.616 20.117 24.479 1.00 9.10 ATOM 119 CA GLY 17 -11.017 19.782 25.778 1.00 9.10 ATOM 120 C GLY 17 -9.917 20.774 26.205 1.00 9.10 ATOM 121 O GLY 17 -10.091 21.992 26.131 1.00 9.10 ATOM 122 N GLN 18 -8.769 20.254 26.653 1.00 6.90 ATOM 123 CA GLN 18 -7.592 21.051 27.041 1.00 6.90 ATOM 124 C GLN 18 -7.072 21.926 25.884 1.00 6.90 ATOM 125 O GLN 18 -7.030 21.499 24.727 1.00 6.90 ATOM 126 CB GLN 18 -6.508 20.095 27.582 1.00 6.80 ATOM 127 CG GLN 18 -5.108 20.688 27.847 1.00 6.80 ATOM 128 CD GLN 18 -5.034 21.722 28.976 1.00 6.80 ATOM 129 OE1 GLN 18 -6.016 22.090 29.609 1.00 6.80 ATOM 130 NE2 GLN 18 -3.853 22.217 29.284 1.00 6.80 ATOM 131 N ASN 19 -6.633 23.148 26.206 1.00 6.20 ATOM 132 CA ASN 19 -5.971 24.055 25.268 1.00 6.20 ATOM 133 C ASN 19 -4.588 23.513 24.837 1.00 6.20 ATOM 134 O ASN 19 -3.709 23.295 25.671 1.00 6.20 ATOM 135 CB ASN 19 -5.876 25.466 25.898 1.00 6.80 ATOM 136 CG ASN 19 -5.145 25.505 27.238 1.00 6.80 ATOM 137 OD1 ASN 19 -5.644 25.032 28.250 1.00 6.80 ATOM 138 ND2 ASN 19 -3.957 26.067 27.301 1.00 6.80 ATOM 139 N TRP 20 -4.376 23.376 23.523 1.00 4.50 ATOM 140 CA TRP 20 -3.073 23.090 22.890 1.00 4.50 ATOM 141 C TRP 20 -2.672 24.276 21.998 1.00 4.50 ATOM 142 O TRP 20 -2.312 24.152 20.829 1.00 4.50 ATOM 143 CB TRP 20 -3.108 21.722 22.196 1.00 5.00 ATOM 144 CG TRP 20 -3.427 20.583 23.121 1.00 5.00 ATOM 145 CD1 TRP 20 -4.583 19.883 23.143 1.00 5.00 ATOM 146 CD2 TRP 20 -2.617 20.041 24.215 1.00 5.00 ATOM 147 NE1 TRP 20 -4.541 18.938 24.150 1.00 5.00 ATOM 148 CE2 TRP 20 -3.358 19.001 24.853 1.00 5.00 ATOM 149 CE3 TRP 20 -1.339 20.334 24.748 1.00 5.00 ATOM 150 CZ2 TRP 20 -2.862 18.288 25.956 1.00 5.00 ATOM 151 CZ3 TRP 20 -0.834 19.627 25.858 1.00 5.00 ATOM 152 CH2 TRP 20 -1.591 18.608 26.462 1.00 5.00 ATOM 153 N ALA 21 -2.819 25.465 22.586 1.00 5.10 ATOM 154 CA ALA 21 -2.763 26.779 21.958 1.00 5.10 ATOM 155 C ALA 21 -1.342 27.291 21.651 1.00 5.10 ATOM 156 O ALA 21 -1.059 28.467 21.871 1.00 5.10 ATOM 157 CB ALA 21 -3.586 27.724 22.852 1.00 5.40 ATOM 158 N SER 22 -0.449 26.469 21.087 1.00 5.30 ATOM 159 CA SER 22 0.910 26.897 20.689 1.00 5.30 ATOM 160 C SER 22 0.870 28.154 19.802 1.00 5.30 ATOM 161 O SER 22 1.611 29.109 20.015 1.00 5.30 ATOM 162 CB SER 22 1.628 25.781 19.910 1.00 5.40 ATOM 163 OG SER 22 1.394 24.494 20.460 1.00 5.40 ATOM 164 N LEU 23 -0.074 28.180 18.855 1.00 5.80 ATOM 165 CA LEU 23 -0.276 29.262 17.883 1.00 5.80 ATOM 166 C LEU 23 -1.209 30.400 18.368 1.00 5.80 ATOM 167 O LEU 23 -1.453 31.325 17.597 1.00 5.80 ATOM 168 CB LEU 23 -0.749 28.624 16.550 1.00 6.10 ATOM 169 CG LEU 23 0.164 28.960 15.356 1.00 6.10 ATOM 170 CD1 LEU 23 1.534 28.285 15.470 1.00 6.10 ATOM 171 CD2 LEU 23 -0.472 28.464 14.059 1.00 6.10 ATOM 172 N ALA 24 -1.722 30.361 19.611 1.00 6.90 ATOM 173 CA ALA 24 -2.687 31.356 20.132 1.00 6.90 ATOM 174 C ALA 24 -2.509 31.804 21.602 1.00 6.90 ATOM 175 O ALA 24 -3.115 32.793 22.014 1.00 6.90 ATOM 176 CB ALA 24 -4.106 30.841 19.870 1.00 7.00 ATOM 177 N ALA 25 -1.658 31.130 22.382 1.00 8.10 ATOM 178 CA ALA 25 -1.349 31.433 23.786 1.00 8.10 ATOM 179 C ALA 25 0.158 31.260 24.095 1.00 8.10 ATOM 180 O ALA 25 0.549 30.958 25.223 1.00 8.10 ATOM 181 CB ALA 25 -2.251 30.569 24.679 1.00 8.20 ATOM 182 N ASN 26 1.003 31.420 23.065 1.00 9.70 ATOM 183 CA ASN 26 2.466 31.330 23.149 1.00 9.70 ATOM 184 C ASN 26 3.131 32.096 21.986 1.00 9.70 ATOM 185 O ASN 26 3.975 32.963 22.211 1.00 9.70 ATOM 186 CB ASN 26 2.874 29.838 23.176 1.00 9.70 ATOM 187 CG ASN 26 4.288 29.591 23.683 1.00 9.70 ATOM 188 OD1 ASN 26 4.947 30.441 24.265 1.00 9.70 ATOM 189 ND2 ASN 26 4.800 28.395 23.486 1.00 9.70 ATOM 190 N GLU 27 2.697 31.829 20.745 1.00 10.90 ATOM 191 CA GLU 27 3.277 32.374 19.503 1.00 10.90 ATOM 192 C GLU 27 2.302 33.293 18.724 1.00 10.90 ATOM 193 O GLU 27 2.119 33.148 17.513 1.00 10.90 ATOM 194 CB GLU 27 3.848 31.211 18.663 1.00 12.10 ATOM 195 CG GLU 27 4.963 30.448 19.404 1.00 12.10 ATOM 196 CD GLU 27 5.631 29.344 18.556 1.00 12.10 ATOM 197 OE1 GLU 27 4.927 28.575 17.858 1.00 12.10 ATOM 198 OE2 GLU 27 6.879 29.225 18.614 1.00 12.10 ATOM 199 N LEU 28 1.662 34.246 19.424 1.00 10.20 ATOM 200 CA LEU 28 0.691 35.223 18.878 1.00 10.20 ATOM 201 C LEU 28 0.798 36.605 19.576 1.00 10.20 ATOM 202 O LEU 28 1.289 36.677 20.704 1.00 10.20 ATOM 203 CB LEU 28 -0.723 34.605 19.009 1.00 9.20 ATOM 204 CG LEU 28 -1.879 35.382 18.345 1.00 9.20 ATOM 205 CD1 LEU 28 -1.676 35.525 16.835 1.00 9.20 ATOM 206 CD2 LEU 28 -3.217 34.674 18.558 1.00 9.20 ATOM 207 N ARG 29 0.315 37.692 18.939 1.00 11.80 ATOM 208 CA ARG 29 0.225 39.050 19.537 1.00 11.80 ATOM 209 C ARG 29 -1.143 39.746 19.321 1.00 11.80 ATOM 210 O ARG 29 -2.140 39.084 19.046 1.00 11.80 ATOM 211 CB ARG 29 1.447 39.886 19.089 1.00 13.90 ATOM 212 CG ARG 29 1.856 40.842 20.221 1.00 13.90 ATOM 213 CD ARG 29 2.827 41.936 19.783 1.00 13.90 ATOM 214 NE ARG 29 2.973 42.902 20.895 1.00 13.90 ATOM 215 CZ ARG 29 2.517 44.141 20.965 1.00 13.90 ATOM 216 NH1 ARG 29 2.568 44.800 22.084 1.00 13.90 ATOM 217 NH2 ARG 29 2.005 44.742 19.933 1.00 13.90 ATOM 218 N VAL 30 -1.205 41.075 19.501 1.00 10.60 ATOM 219 CA VAL 30 -2.427 41.908 19.562 1.00 10.60 ATOM 220 C VAL 30 -3.186 41.923 18.233 1.00 10.60 ATOM 221 O VAL 30 -2.629 42.249 17.187 1.00 10.60 ATOM 222 CB VAL 30 -2.085 43.371 19.970 1.00 10.00 ATOM 223 CG1 VAL 30 -3.254 44.362 19.838 1.00 10.00 ATOM 224 CG2 VAL 30 -1.641 43.467 21.433 1.00 10.00 ATOM 225 N THR 31 -4.483 41.625 18.279 1.00 12.60 ATOM 226 CA THR 31 -5.434 41.856 17.178 1.00 12.60 ATOM 227 C THR 31 -5.629 43.365 16.997 1.00 12.60 ATOM 228 O THR 31 -6.444 43.985 17.680 1.00 12.60 ATOM 229 CB THR 31 -6.787 41.196 17.487 1.00 13.30 ATOM 230 OG1 THR 31 -6.554 39.844 17.796 1.00 13.30 ATOM 231 CG2 THR 31 -7.758 41.262 16.306 1.00 13.30 ATOM 232 N GLU 32 -4.872 43.983 16.093 1.00 12.50 ATOM 233 CA GLU 32 -4.974 45.418 15.791 1.00 12.50 ATOM 234 C GLU 32 -5.935 45.650 14.608 1.00 12.50 ATOM 235 O GLU 32 -5.513 46.059 13.529 1.00 12.50 ATOM 236 CB GLU 32 -3.563 46.007 15.621 1.00 13.00 ATOM 237 CG GLU 32 -3.595 47.543 15.550 1.00 13.00 ATOM 238 CD GLU 32 -2.255 48.214 15.914 1.00 13.00 ATOM 239 OE1 GLU 32 -1.187 47.556 15.890 1.00 13.00 ATOM 240 OE2 GLU 32 -2.269 49.431 16.226 1.00 13.00 ATOM 241 N ARG 33 -7.228 45.339 14.830 1.00 11.30 ATOM 242 CA ARG 33 -8.320 45.239 13.826 1.00 11.30 ATOM 243 C ARG 33 -8.071 44.164 12.733 1.00 11.30 ATOM 244 O ARG 33 -6.953 43.661 12.601 1.00 11.30 ATOM 245 CB ARG 33 -8.636 46.638 13.229 1.00 12.20 ATOM 246 CG ARG 33 -9.183 47.685 14.217 1.00 12.20 ATOM 247 CD ARG 33 -10.414 47.217 15.009 1.00 12.20 ATOM 248 NE ARG 33 -11.123 48.350 15.642 1.00 12.20 ATOM 249 CZ ARG 33 -11.089 48.744 16.905 1.00 12.20 ATOM 250 NH1 ARG 33 -11.850 49.725 17.303 1.00 12.20 ATOM 251 NH2 ARG 33 -10.317 48.190 17.799 1.00 12.20 ATOM 252 N PRO 34 -9.102 43.764 11.954 1.00 9.20 ATOM 253 CA PRO 34 -8.917 42.926 10.763 1.00 9.20 ATOM 254 C PRO 34 -7.868 43.518 9.797 1.00 9.20 ATOM 255 O PRO 34 -8.049 44.638 9.317 1.00 9.20 ATOM 256 CB PRO 34 -10.302 42.845 10.099 1.00 9.90 ATOM 257 CG PRO 34 -11.317 43.246 11.167 1.00 9.90 ATOM 258 CD PRO 34 -10.519 43.978 12.240 1.00 9.90 ATOM 259 N PHE 35 -6.792 42.776 9.490 1.00 7.20 ATOM 260 CA PHE 35 -5.670 43.236 8.644 1.00 7.20 ATOM 261 C PHE 35 -4.989 42.100 7.847 1.00 7.20 ATOM 262 O PHE 35 -4.932 40.970 8.320 1.00 7.20 ATOM 263 CB PHE 35 -4.622 43.968 9.506 1.00 7.20 ATOM 264 CG PHE 35 -4.673 45.485 9.433 1.00 7.20 ATOM 265 CD1 PHE 35 -5.388 46.215 10.396 1.00 7.20 ATOM 266 CD2 PHE 35 -3.953 46.178 8.439 1.00 7.20 ATOM 267 CE1 PHE 35 -5.324 47.618 10.420 1.00 7.20 ATOM 268 CE2 PHE 35 -3.912 47.585 8.444 1.00 7.20 ATOM 269 CZ PHE 35 -4.576 48.304 9.451 1.00 7.20 ATOM 270 N TRP 36 -4.427 42.414 6.665 1.00 6.20 ATOM 271 CA TRP 36 -3.532 41.514 5.895 1.00 6.20 ATOM 272 C TRP 36 -2.210 42.179 5.449 1.00 6.20 ATOM 273 O TRP 36 -1.223 41.476 5.258 1.00 6.20 ATOM 274 CB TRP 36 -4.235 40.868 4.688 1.00 8.20 ATOM 275 CG TRP 36 -3.588 39.581 4.248 1.00 8.20 ATOM 276 CD1 TRP 36 -2.487 39.453 3.470 1.00 8.20 ATOM 277 CD2 TRP 36 -3.904 38.226 4.689 1.00 8.20 ATOM 278 NE1 TRP 36 -2.068 38.135 3.464 1.00 8.20 ATOM 279 CE2 TRP 36 -2.864 37.350 4.267 1.00 8.20 ATOM 280 CE3 TRP 36 -4.959 37.651 5.423 1.00 8.20 ATOM 281 CZ2 TRP 36 -2.837 35.992 4.622 1.00 8.20 ATOM 282 CZ3 TRP 36 -4.921 36.300 5.814 1.00 8.20 ATOM 283 CH2 TRP 36 -3.865 35.468 5.415 1.00 8.20 ATOM 284 N ILE 37 -2.152 43.521 5.385 1.00 4.30 ATOM 285 CA ILE 37 -0.932 44.325 5.127 1.00 4.30 ATOM 286 C ILE 37 -0.391 44.194 3.678 1.00 4.30 ATOM 287 O ILE 37 -0.764 43.301 2.917 1.00 4.30 ATOM 288 CB ILE 37 0.129 44.028 6.238 1.00 4.30 ATOM 289 CG1 ILE 37 -0.422 44.331 7.651 1.00 4.30 ATOM 290 CG2 ILE 37 1.479 44.756 6.093 1.00 4.30 ATOM 291 CD1 ILE 37 -0.186 43.207 8.660 1.00 4.30 ATOM 292 N SER 38 0.522 45.097 3.290 1.00 5.00 ATOM 293 CA SER 38 1.370 45.035 2.079 1.00 5.00 ATOM 294 C SER 38 0.642 45.187 0.730 1.00 5.00 ATOM 295 O SER 38 0.786 44.361 -0.172 1.00 5.00 ATOM 296 CB SER 38 2.336 43.832 2.164 1.00 5.60 ATOM 297 OG SER 38 1.693 42.571 2.068 1.00 5.60 ATOM 298 N SER 39 -0.100 46.292 0.575 1.00 5.30 ATOM 299 CA SER 39 -0.898 46.656 -0.622 1.00 5.30 ATOM 300 C SER 39 -2.222 45.879 -0.787 1.00 5.30 ATOM 301 O SER 39 -2.835 45.898 -1.858 1.00 5.30 ATOM 302 CB SER 39 -0.060 46.683 -1.920 1.00 5.80 ATOM 303 OG SER 39 1.179 47.367 -1.740 1.00 5.80 ATOM 304 N PHE 40 -2.706 45.257 0.295 1.00 4.00 ATOM 305 CA PHE 40 -4.002 44.573 0.390 1.00 4.00 ATOM 306 C PHE 40 -4.605 44.721 1.807 1.00 4.00 ATOM 307 O PHE 40 -3.974 44.288 2.772 1.00 4.00 ATOM 308 CB PHE 40 -3.828 43.069 0.133 1.00 5.40 ATOM 309 CG PHE 40 -3.208 42.532 -1.142 1.00 5.40 ATOM 310 CD1 PHE 40 -1.538 42.233 -1.146 1.00 5.40 ATOM 311 CD2 PHE 40 -4.253 41.701 -2.208 1.00 5.40 ATOM 312 CE1 PHE 40 -0.678 41.138 -2.127 1.00 5.40 ATOM 313 CE2 PHE 40 -2.990 40.060 -3.650 1.00 5.40 ATOM 314 CZ PHE 40 -1.311 40.102 -3.313 1.00 5.40 ATOM 315 N ILE 41 -5.799 45.325 1.923 1.00 3.50 ATOM 316 CA ILE 41 -6.710 45.471 3.082 1.00 3.50 ATOM 317 C ILE 41 -7.895 46.450 2.778 1.00 3.50 ATOM 318 O ILE 41 -8.234 47.314 3.589 1.00 3.50 ATOM 319 CB ILE 41 -5.957 45.801 4.416 1.00 4.30 ATOM 320 CG1 ILE 41 -6.806 45.733 5.702 1.00 4.30 ATOM 321 CG2 ILE 41 -5.177 47.122 4.379 1.00 4.30 ATOM 322 CD1 ILE 41 -7.474 44.368 5.838 1.00 4.30 ATOM 323 N GLY 42 -8.557 46.344 1.614 1.00 4.30 ATOM 324 CA GLY 42 -9.837 47.039 1.330 1.00 4.30 ATOM 325 C GLY 42 -9.839 48.298 0.429 1.00 4.30 ATOM 326 O GLY 42 -8.818 48.951 0.210 1.00 4.30 ATOM 327 N ARG 43 -11.062 48.668 -0.002 1.00 4.20 ATOM 328 CA ARG 43 -11.500 49.698 -0.989 1.00 4.20 ATOM 329 C ARG 43 -11.543 49.299 -2.480 1.00 4.20 ATOM 330 O ARG 43 -11.655 50.176 -3.340 1.00 4.20 ATOM 331 CB ARG 43 -10.833 51.075 -0.797 1.00 6.00 ATOM 332 CG ARG 43 -10.827 51.620 0.638 1.00 6.00 ATOM 333 CD ARG 43 -11.175 53.115 0.637 1.00 6.00 ATOM 334 NE ARG 43 -10.708 53.778 1.867 1.00 6.00 ATOM 335 CZ ARG 43 -10.869 55.051 2.181 1.00 6.00 ATOM 336 NH1 ARG 43 -10.257 55.548 3.217 1.00 6.00 ATOM 337 NH2 ARG 43 -11.622 55.854 1.479 1.00 6.00 ATOM 338 N SER 44 -11.504 48.007 -2.808 1.00 3.90 ATOM 339 CA SER 44 -11.539 47.512 -4.203 1.00 3.90 ATOM 340 C SER 44 -12.728 46.566 -4.488 1.00 3.90 ATOM 341 O SER 44 -13.761 46.641 -3.818 1.00 3.90 ATOM 342 CB SER 44 -10.163 46.920 -4.538 1.00 4.50 ATOM 343 OG SER 44 -10.022 46.677 -5.931 1.00 4.50 ATOM 344 N LYS 45 -12.620 45.705 -5.508 1.00 2.90 ATOM 345 CA LYS 45 -13.613 44.691 -5.905 1.00 2.90 ATOM 346 C LYS 45 -13.582 43.427 -5.034 1.00 2.90 ATOM 347 O LYS 45 -12.655 43.192 -4.259 1.00 2.90 ATOM 348 CB LYS 45 -13.394 44.317 -7.385 1.00 3.80 ATOM 349 CG LYS 45 -13.883 45.419 -8.334 1.00 3.80 ATOM 350 CD LYS 45 -13.892 44.914 -9.783 1.00 3.80 ATOM 351 CE LYS 45 -14.444 45.998 -10.717 1.00 3.80 ATOM 352 NZ LYS 45 -14.546 45.511 -12.120 1.00 3.80 TER END