####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS224_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 12 - 38 4.99 10.55 LCS_AVERAGE: 53.98 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.61 10.77 LCS_AVERAGE: 21.02 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.83 10.74 LCS_AVERAGE: 16.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 12 3 3 5 7 10 14 17 18 20 22 23 24 26 27 29 29 32 33 34 34 LCS_GDT V 3 V 3 4 6 12 3 3 5 7 9 13 15 18 20 22 23 24 26 27 29 29 32 33 34 34 LCS_GDT Q 4 Q 4 4 6 18 3 3 5 7 8 8 12 14 17 20 22 24 26 27 29 29 32 33 33 34 LCS_GDT G 5 G 5 4 6 19 0 3 4 7 8 8 9 14 16 16 17 24 24 27 28 28 32 33 33 34 LCS_GDT P 6 P 6 4 6 19 3 3 4 5 6 8 12 15 17 22 23 24 26 27 29 29 32 33 33 34 LCS_GDT W 7 W 7 4 6 19 3 3 4 5 6 8 9 11 20 22 23 24 26 27 29 29 32 33 34 34 LCS_GDT V 8 V 8 4 5 19 3 3 5 10 14 16 17 18 20 22 23 24 26 27 29 29 32 33 34 34 LCS_GDT G 9 G 9 6 9 19 5 6 6 9 9 11 14 17 19 21 23 24 26 27 29 29 32 33 34 34 LCS_GDT S 10 S 10 6 9 22 5 6 6 9 9 11 12 13 13 14 15 16 17 22 25 29 32 33 34 34 LCS_GDT S 11 S 11 6 9 23 5 6 6 9 9 11 12 14 15 17 20 23 26 29 30 30 31 33 34 34 LCS_GDT Y 12 Y 12 6 9 27 5 6 6 9 9 9 11 14 17 19 21 24 26 29 30 30 32 33 34 34 LCS_GDT V 13 V 13 6 9 27 5 6 6 9 9 11 12 14 17 19 21 24 26 29 30 30 32 33 34 34 LCS_GDT A 14 A 14 6 9 27 4 6 6 9 9 11 12 13 14 17 20 23 26 29 30 30 31 31 32 34 LCS_GDT E 15 E 15 4 9 27 4 4 5 9 9 11 12 13 13 17 19 23 26 29 30 30 31 31 32 34 LCS_GDT T 16 T 16 4 9 27 4 4 5 9 9 11 12 13 15 17 19 24 26 29 30 30 32 33 34 34 LCS_GDT G 17 G 17 4 9 27 3 4 5 9 9 11 12 13 15 17 21 24 26 29 30 30 32 33 34 34 LCS_GDT Q 18 Q 18 4 6 27 3 4 4 6 8 11 12 13 16 19 22 24 26 29 30 30 32 33 34 34 LCS_GDT N 19 N 19 4 6 27 3 3 5 7 8 10 12 16 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT W 20 W 20 13 14 27 6 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 31 33 34 34 LCS_GDT A 21 A 21 13 14 27 4 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT S 22 S 22 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT L 23 L 23 13 14 27 5 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT A 24 A 24 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT A 25 A 25 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT N 26 N 26 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT E 27 E 27 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT L 28 L 28 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT R 29 R 29 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT V 30 V 30 13 14 27 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT T 31 T 31 13 14 27 4 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT E 32 E 32 13 14 27 2 11 13 13 14 14 16 18 19 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT R 33 R 33 3 14 27 1 3 5 9 12 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT P 34 P 34 3 5 27 2 3 4 6 6 8 14 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT F 35 F 35 3 5 27 0 4 8 9 12 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 LCS_GDT W 36 W 36 6 7 27 3 4 6 8 11 16 17 18 20 22 23 24 26 28 30 30 32 33 34 34 LCS_GDT I 37 I 37 6 7 27 3 4 6 8 8 12 14 15 18 20 21 24 26 29 30 30 32 33 34 34 LCS_GDT S 38 S 38 6 7 27 4 4 6 8 8 10 11 15 17 19 21 24 26 29 30 30 31 33 34 34 LCS_GDT S 39 S 39 6 7 25 4 4 6 8 8 10 11 11 15 19 21 24 26 29 30 30 31 33 34 34 LCS_GDT F 40 F 40 6 7 25 4 4 6 8 8 10 11 11 16 19 21 24 26 29 30 30 31 33 34 34 LCS_GDT I 41 I 41 6 7 24 4 5 6 8 8 10 11 11 15 17 18 22 24 26 27 29 31 31 32 34 LCS_GDT G 42 G 42 5 7 15 4 5 6 8 8 9 10 10 15 17 17 20 20 24 25 29 30 31 32 34 LCS_GDT R 43 R 43 5 6 15 4 5 6 6 7 10 11 11 13 15 17 20 20 21 25 27 29 31 32 34 LCS_GDT S 44 S 44 5 6 15 4 5 6 6 7 7 8 9 10 12 14 15 18 21 21 22 25 31 32 34 LCS_GDT K 45 K 45 5 6 15 3 5 6 6 7 7 8 9 10 11 13 15 16 18 20 21 22 24 25 26 LCS_AVERAGE LCS_A: 30.48 ( 16.43 21.02 53.98 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 13 13 14 16 17 18 20 22 23 24 26 29 30 30 32 33 34 34 GDT PERCENT_AT 15.91 25.00 29.55 29.55 31.82 36.36 38.64 40.91 45.45 50.00 52.27 54.55 59.09 65.91 68.18 68.18 72.73 75.00 77.27 77.27 GDT RMS_LOCAL 0.30 0.64 0.83 0.83 1.32 2.02 2.35 2.48 2.99 3.17 3.33 3.57 3.99 5.12 5.21 5.21 5.60 5.65 6.05 6.01 GDT RMS_ALL_AT 10.78 10.66 10.74 10.74 10.92 11.10 11.22 11.19 11.32 11.26 11.19 11.50 11.21 10.68 10.62 10.62 10.49 10.55 9.95 10.23 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 4.636 0 0.579 0.576 7.174 5.000 4.000 - LGA V 3 V 3 5.826 0 0.042 0.067 7.609 0.455 2.857 6.286 LGA Q 4 Q 4 10.586 0 0.615 1.536 11.865 0.000 0.000 11.278 LGA G 5 G 5 11.955 0 0.062 0.062 11.955 0.000 0.000 - LGA P 6 P 6 9.500 0 0.693 0.601 11.722 0.000 0.000 11.010 LGA W 7 W 7 5.849 0 0.370 1.051 13.794 17.273 4.935 12.772 LGA V 8 V 8 2.404 0 0.669 1.484 6.613 28.636 17.403 4.990 LGA G 9 G 9 5.495 0 0.554 0.554 7.044 2.727 2.727 - LGA S 10 S 10 11.106 0 0.070 0.679 14.661 0.000 0.000 14.661 LGA S 11 S 11 13.372 0 0.019 0.039 15.330 0.000 0.000 15.330 LGA Y 12 Y 12 10.889 0 0.041 1.057 12.830 0.000 0.000 9.368 LGA V 13 V 13 10.399 0 0.206 1.199 13.672 0.000 0.000 9.432 LGA A 14 A 14 17.587 0 0.029 0.028 19.918 0.000 0.000 - LGA E 15 E 15 19.073 0 0.036 1.175 23.533 0.000 0.000 22.857 LGA T 16 T 16 14.706 0 0.695 0.605 15.699 0.000 0.000 10.220 LGA G 17 G 17 13.557 0 0.683 0.683 13.687 0.000 0.000 - LGA Q 18 Q 18 9.815 0 0.605 1.087 15.095 0.000 0.000 11.880 LGA N 19 N 19 6.753 0 0.098 0.972 10.826 0.455 0.227 9.935 LGA W 20 W 20 1.309 0 0.593 1.276 9.342 66.818 21.429 9.012 LGA A 21 A 21 1.686 0 0.056 0.054 2.723 58.182 52.000 - LGA S 22 S 22 1.586 0 0.073 0.110 2.984 54.545 47.273 2.984 LGA L 23 L 23 2.572 0 0.060 0.128 5.071 35.909 21.136 4.785 LGA A 24 A 24 2.287 0 0.051 0.050 2.410 44.545 43.273 - LGA A 25 A 25 0.741 0 0.035 0.033 1.056 77.727 82.182 - LGA N 26 N 26 1.486 0 0.049 0.068 2.561 58.182 48.409 1.746 LGA E 27 E 27 2.581 0 0.061 0.120 4.189 30.000 21.414 3.848 LGA L 28 L 28 2.375 0 0.161 0.171 3.941 44.545 32.955 3.099 LGA R 29 R 29 1.475 0 0.099 1.016 4.572 61.818 47.107 1.275 LGA V 30 V 30 0.908 0 0.140 0.189 1.290 86.364 77.403 1.055 LGA T 31 T 31 1.790 0 0.703 0.641 2.657 45.000 42.338 2.520 LGA E 32 E 32 3.767 0 0.613 1.354 11.559 26.818 11.919 11.474 LGA R 33 R 33 3.210 0 0.634 1.104 9.178 26.364 9.587 9.178 LGA P 34 P 34 5.878 0 0.058 0.065 9.300 15.455 8.831 9.300 LGA F 35 F 35 3.337 0 0.608 1.350 11.038 21.364 7.769 11.038 LGA W 36 W 36 2.772 0 0.636 0.478 10.381 25.455 7.403 9.981 LGA I 37 I 37 6.717 0 0.049 0.845 11.194 0.000 0.000 8.015 LGA S 38 S 38 10.593 0 0.146 0.666 13.660 0.000 0.000 9.137 LGA S 39 S 39 11.306 0 0.130 0.704 14.569 0.000 0.000 9.516 LGA F 40 F 40 12.395 0 0.071 1.731 16.906 0.000 0.000 8.654 LGA I 41 I 41 18.618 0 0.589 0.559 22.021 0.000 0.000 18.340 LGA G 42 G 42 23.248 0 0.128 0.128 25.338 0.000 0.000 - LGA R 43 R 43 23.106 0 0.055 1.362 23.106 0.000 0.000 21.601 LGA S 44 S 44 25.210 0 0.152 0.639 29.158 0.000 0.000 29.158 LGA K 45 K 45 26.089 0 0.622 0.550 29.731 0.000 0.000 29.731 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.648 9.681 10.353 18.946 13.968 7.688 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.48 40.909 36.745 0.697 LGA_LOCAL RMSD: 2.481 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.189 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.648 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.317770 * X + -0.836997 * Y + 0.445486 * Z + 11.960730 Y_new = -0.656777 * X + -0.533174 * Y + -0.533263 * Z + 44.296135 Z_new = 0.683861 * X + -0.123129 * Y + -0.719147 * Z + 10.124738 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.120166 -0.753042 -2.972021 [DEG: -64.1808 -43.1461 -170.2843 ] ZXZ: 0.695954 2.373371 1.748938 [DEG: 39.8752 135.9841 100.2068 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS224_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.48 36.745 9.65 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS224_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 REFINED PARENT N/A ATOM 12 N ALA 2 9.545 34.111 16.164 1.00 93.94 ATOM 13 CA ALA 2 8.213 33.846 16.612 1.00 93.94 ATOM 14 C ALA 2 7.683 32.698 15.818 1.00 93.94 ATOM 15 O ALA 2 7.096 31.769 16.370 1.00 93.94 ATOM 17 CB ALA 2 7.346 35.087 16.462 1.00 93.94 ATOM 18 N VAL 3 7.902 32.719 14.489 1.00 97.83 ATOM 19 CA VAL 3 7.389 31.653 13.682 1.00 97.83 ATOM 20 C VAL 3 8.536 30.848 13.168 1.00 97.83 ATOM 21 O VAL 3 9.460 31.372 12.547 1.00 97.83 ATOM 23 CB VAL 3 6.522 32.186 12.526 1.00 97.83 ATOM 24 CG1 VAL 3 6.019 31.039 11.664 1.00 97.83 ATOM 25 CG2 VAL 3 5.357 33.002 13.066 1.00 97.83 ATOM 26 N GLN 4 8.510 29.533 13.457 1.00 97.98 ATOM 27 CA GLN 4 9.537 28.648 12.997 1.00 97.98 ATOM 28 C GLN 4 9.409 28.501 11.513 1.00 97.98 ATOM 29 O GLN 4 10.406 28.479 10.794 1.00 97.98 ATOM 31 CB GLN 4 9.434 27.295 13.705 1.00 97.98 ATOM 32 CD GLN 4 11.916 26.835 13.812 1.00 97.98 ATOM 33 CG GLN 4 10.559 26.330 13.363 1.00 97.98 ATOM 34 OE1 GLN 4 12.112 27.164 14.982 1.00 97.98 ATOM 37 NE2 GLN 4 12.860 26.899 12.879 1.00 97.98 ATOM 38 N GLY 5 8.160 28.427 11.014 1.00 99.12 ATOM 39 CA GLY 5 7.933 28.195 9.617 1.00 99.12 ATOM 40 C GLY 5 8.145 29.468 8.870 1.00 99.12 ATOM 41 O GLY 5 8.540 30.495 9.420 1.00 99.12 ATOM 43 N PRO 6 7.880 29.395 7.595 1.00 91.98 ATOM 44 CA PRO 6 8.064 30.537 6.753 1.00 91.98 ATOM 45 C PRO 6 7.125 31.611 7.168 1.00 91.98 ATOM 46 O PRO 6 5.977 31.312 7.494 1.00 91.98 ATOM 47 CB PRO 6 7.761 30.013 5.348 1.00 91.98 ATOM 48 CD PRO 6 7.585 28.122 6.804 1.00 91.98 ATOM 49 CG PRO 6 8.025 28.546 5.431 1.00 91.98 ATOM 50 N TRP 7 7.594 32.868 7.163 1.00 93.35 ATOM 51 CA TRP 7 6.754 33.930 7.611 1.00 93.35 ATOM 52 C TRP 7 5.780 34.242 6.525 1.00 93.35 ATOM 53 O TRP 7 6.129 34.309 5.348 1.00 93.35 ATOM 55 CB TRP 7 7.591 35.153 7.988 1.00 93.35 ATOM 58 CG TRP 7 6.780 36.296 8.516 1.00 93.35 ATOM 59 CD1 TRP 7 6.429 36.520 9.817 1.00 93.35 ATOM 61 NE1 TRP 7 5.683 37.669 9.915 1.00 93.35 ATOM 62 CD2 TRP 7 6.217 37.372 7.757 1.00 93.35 ATOM 63 CE2 TRP 7 5.539 38.210 8.662 1.00 93.35 ATOM 64 CH2 TRP 7 4.889 39.669 6.923 1.00 93.35 ATOM 65 CZ2 TRP 7 4.871 39.363 8.255 1.00 93.35 ATOM 66 CE3 TRP 7 6.219 37.710 6.400 1.00 93.35 ATOM 67 CZ3 TRP 7 5.555 38.854 6.001 1.00 93.35 ATOM 68 N VAL 8 4.508 34.429 6.919 1.00 97.68 ATOM 69 CA VAL 8 3.470 34.706 5.974 1.00 97.68 ATOM 70 C VAL 8 2.798 35.960 6.435 1.00 97.68 ATOM 71 O VAL 8 2.912 36.346 7.598 1.00 97.68 ATOM 73 CB VAL 8 2.485 33.528 5.855 1.00 97.68 ATOM 74 CG1 VAL 8 3.206 32.279 5.371 1.00 97.68 ATOM 75 CG2 VAL 8 1.800 33.269 7.188 1.00 97.68 ATOM 76 N GLY 9 2.087 36.644 5.518 1.00 92.78 ATOM 77 CA GLY 9 1.455 37.881 5.868 1.00 92.78 ATOM 78 C GLY 9 0.054 37.574 6.259 1.00 92.78 ATOM 79 O GLY 9 -0.623 36.770 5.623 1.00 92.78 ATOM 81 N SER 10 -0.414 38.255 7.317 1.00 95.54 ATOM 82 CA SER 10 -1.717 38.059 7.872 1.00 95.54 ATOM 83 C SER 10 -2.741 38.445 6.852 1.00 95.54 ATOM 84 O SER 10 -3.791 37.815 6.744 1.00 95.54 ATOM 86 CB SER 10 -1.879 38.872 9.159 1.00 95.54 ATOM 88 OG SER 10 -3.163 38.679 9.725 1.00 95.54 ATOM 89 N SER 11 -2.455 39.501 6.069 1.00 94.77 ATOM 90 CA SER 11 -3.395 39.987 5.095 1.00 94.77 ATOM 91 C SER 11 -3.620 38.950 4.038 1.00 94.77 ATOM 92 O SER 11 -4.752 38.710 3.621 1.00 94.77 ATOM 94 CB SER 11 -2.895 41.293 4.474 1.00 94.77 ATOM 96 OG SER 11 -3.816 41.789 3.518 1.00 94.77 ATOM 97 N TYR 12 -2.535 38.286 3.598 1.00 96.29 ATOM 98 CA TYR 12 -2.584 37.320 2.535 1.00 96.29 ATOM 99 C TYR 12 -3.434 36.173 2.977 1.00 96.29 ATOM 100 O TYR 12 -4.156 35.568 2.186 1.00 96.29 ATOM 102 CB TYR 12 -1.172 36.860 2.163 1.00 96.29 ATOM 103 CG TYR 12 -1.132 35.867 1.024 1.00 96.29 ATOM 105 OH TYR 12 -1.020 33.150 -2.122 1.00 96.29 ATOM 106 CZ TYR 12 -1.058 34.048 -1.079 1.00 96.29 ATOM 107 CD1 TYR 12 -1.270 36.289 -0.292 1.00 96.29 ATOM 108 CE1 TYR 12 -1.233 35.389 -1.340 1.00 96.29 ATOM 109 CD2 TYR 12 -0.954 34.512 1.267 1.00 96.29 ATOM 110 CE2 TYR 12 -0.916 33.597 0.232 1.00 96.29 ATOM 111 N VAL 13 -3.360 35.866 4.279 1.00 93.65 ATOM 112 CA VAL 13 -3.985 34.747 4.915 1.00 93.65 ATOM 113 C VAL 13 -5.481 34.884 4.835 1.00 93.65 ATOM 114 O VAL 13 -6.215 33.978 5.223 1.00 93.65 ATOM 116 CB VAL 13 -3.534 34.608 6.381 1.00 93.65 ATOM 117 CG1 VAL 13 -2.032 34.377 6.457 1.00 93.65 ATOM 118 CG2 VAL 13 -3.928 35.841 7.179 1.00 93.65 ATOM 119 N ALA 14 -5.986 36.035 4.351 1.00 95.13 ATOM 120 CA ALA 14 -7.406 36.264 4.308 1.00 95.13 ATOM 121 C ALA 14 -8.062 35.126 3.578 1.00 95.13 ATOM 122 O ALA 14 -9.156 34.703 3.948 1.00 95.13 ATOM 124 CB ALA 14 -7.709 37.596 3.638 1.00 95.13 ATOM 125 N GLU 15 -7.417 34.608 2.519 1.00 99.52 ATOM 126 CA GLU 15 -7.930 33.490 1.775 1.00 99.52 ATOM 127 C GLU 15 -7.893 32.241 2.624 1.00 99.52 ATOM 128 O GLU 15 -8.767 31.384 2.514 1.00 99.52 ATOM 130 CB GLU 15 -7.129 33.290 0.487 1.00 99.52 ATOM 131 CD GLU 15 -6.496 34.173 -1.793 1.00 99.52 ATOM 132 CG GLU 15 -7.320 34.393 -0.540 1.00 99.52 ATOM 133 OE1 GLU 15 -5.650 33.254 -1.793 1.00 99.52 ATOM 134 OE2 GLU 15 -6.695 34.919 -2.775 1.00 99.52 ATOM 135 N THR 16 -6.876 32.121 3.503 1.00 99.16 ATOM 136 CA THR 16 -6.610 30.942 4.292 1.00 99.16 ATOM 137 C THR 16 -7.689 30.752 5.328 1.00 99.16 ATOM 138 O THR 16 -8.538 31.618 5.529 1.00 99.16 ATOM 140 CB THR 16 -5.233 31.021 4.979 1.00 99.16 ATOM 142 OG1 THR 16 -5.214 32.127 5.890 1.00 99.16 ATOM 143 CG2 THR 16 -4.134 31.221 3.947 1.00 99.16 ATOM 144 N GLY 17 -7.688 29.577 6.000 1.00 96.36 ATOM 145 CA GLY 17 -8.669 29.225 6.991 1.00 96.36 ATOM 146 C GLY 17 -8.507 30.147 8.155 1.00 96.36 ATOM 147 O GLY 17 -7.434 30.702 8.381 1.00 96.36 ATOM 149 N GLN 18 -9.597 30.319 8.929 1.00 97.17 ATOM 150 CA GLN 18 -9.609 31.237 10.029 1.00 97.17 ATOM 151 C GLN 18 -8.650 30.817 11.095 1.00 97.17 ATOM 152 O GLN 18 -7.908 31.645 11.619 1.00 97.17 ATOM 154 CB GLN 18 -11.019 31.358 10.610 1.00 97.17 ATOM 155 CD GLN 18 -13.414 32.078 10.260 1.00 97.17 ATOM 156 CG GLN 18 -12.004 32.079 9.704 1.00 97.17 ATOM 157 OE1 GLN 18 -13.806 31.163 10.985 1.00 97.17 ATOM 160 NE2 GLN 18 -14.183 33.107 9.922 1.00 97.17 ATOM 161 N ASN 19 -8.626 29.519 11.444 1.00 91.42 ATOM 162 CA ASN 19 -7.762 29.096 12.510 1.00 91.42 ATOM 163 C ASN 19 -6.348 29.338 12.106 1.00 91.42 ATOM 164 O ASN 19 -5.556 29.893 12.866 1.00 91.42 ATOM 166 CB ASN 19 -8.015 27.626 12.852 1.00 91.42 ATOM 167 CG ASN 19 -9.324 27.416 13.588 1.00 91.42 ATOM 168 OD1 ASN 19 -9.893 28.356 14.143 1.00 91.42 ATOM 171 ND2 ASN 19 -9.806 26.179 13.594 1.00 91.42 ATOM 172 N TRP 20 -6.005 28.936 10.871 1.00 96.07 ATOM 173 CA TRP 20 -4.668 29.079 10.382 1.00 96.07 ATOM 174 C TRP 20 -4.353 30.534 10.297 1.00 96.07 ATOM 175 O TRP 20 -3.272 30.973 10.683 1.00 96.07 ATOM 177 CB TRP 20 -4.518 28.390 9.023 1.00 96.07 ATOM 180 CG TRP 20 -3.135 28.480 8.455 1.00 96.07 ATOM 181 CD1 TRP 20 -2.100 27.619 8.678 1.00 96.07 ATOM 183 NE1 TRP 20 -0.985 28.026 7.986 1.00 96.07 ATOM 184 CD2 TRP 20 -2.635 29.489 7.569 1.00 96.07 ATOM 185 CE2 TRP 20 -1.291 29.174 7.297 1.00 96.07 ATOM 186 CH2 TRP 20 -1.066 31.063 5.898 1.00 96.07 ATOM 187 CZ2 TRP 20 -0.495 29.956 6.461 1.00 96.07 ATOM 188 CE3 TRP 20 -3.192 30.628 6.980 1.00 96.07 ATOM 189 CZ3 TRP 20 -2.400 31.399 6.152 1.00 96.07 ATOM 190 N ALA 21 -5.315 31.325 9.792 1.00 90.16 ATOM 191 CA ALA 21 -5.117 32.727 9.587 1.00 90.16 ATOM 192 C ALA 21 -4.876 33.424 10.881 1.00 90.16 ATOM 193 O ALA 21 -3.996 34.277 10.979 1.00 90.16 ATOM 195 CB ALA 21 -6.317 33.335 8.877 1.00 90.16 ATOM 196 N SER 22 -5.652 33.061 11.913 1.00 92.43 ATOM 197 CA SER 22 -5.568 33.721 13.180 1.00 92.43 ATOM 198 C SER 22 -4.223 33.468 13.780 1.00 92.43 ATOM 199 O SER 22 -3.733 34.272 14.572 1.00 92.43 ATOM 201 CB SER 22 -6.684 33.239 14.111 1.00 92.43 ATOM 203 OG SER 22 -6.518 31.871 14.439 1.00 92.43 ATOM 204 N LEU 23 -3.580 32.350 13.401 1.00 91.37 ATOM 205 CA LEU 23 -2.330 31.987 13.999 1.00 91.37 ATOM 206 C LEU 23 -1.321 33.054 13.728 1.00 91.37 ATOM 207 O LEU 23 -0.557 33.429 14.616 1.00 91.37 ATOM 209 CB LEU 23 -1.853 30.635 13.465 1.00 91.37 ATOM 210 CG LEU 23 -2.666 29.411 13.894 1.00 91.37 ATOM 211 CD1 LEU 23 -2.199 28.168 13.153 1.00 91.37 ATOM 212 CD2 LEU 23 -2.567 29.199 15.397 1.00 91.37 ATOM 213 N ALA 24 -1.299 33.589 12.495 1.00 98.04 ATOM 214 CA ALA 24 -0.309 34.570 12.168 1.00 98.04 ATOM 215 C ALA 24 -0.498 35.749 13.064 1.00 98.04 ATOM 216 O ALA 24 0.466 36.280 13.612 1.00 98.04 ATOM 218 CB ALA 24 -0.415 34.961 10.702 1.00 98.04 ATOM 219 N ALA 25 -1.759 36.169 13.259 1.00 91.57 ATOM 220 CA ALA 25 -2.055 37.316 14.063 1.00 91.57 ATOM 221 C ALA 25 -1.610 37.058 15.457 1.00 91.57 ATOM 222 O ALA 25 -1.023 37.930 16.092 1.00 91.57 ATOM 224 CB ALA 25 -3.541 37.632 14.009 1.00 91.57 ATOM 225 N ASN 26 -1.887 35.852 15.976 1.00 94.01 ATOM 226 CA ASN 26 -1.556 35.554 17.338 1.00 94.01 ATOM 227 C ASN 26 -0.072 35.594 17.511 1.00 94.01 ATOM 228 O ASN 26 0.432 36.190 18.463 1.00 94.01 ATOM 230 CB ASN 26 -2.132 34.196 17.745 1.00 94.01 ATOM 231 CG ASN 26 -3.635 34.233 17.930 1.00 94.01 ATOM 232 OD1 ASN 26 -4.225 35.301 18.088 1.00 94.01 ATOM 235 ND2 ASN 26 -4.261 33.062 17.909 1.00 94.01 ATOM 236 N GLU 27 0.679 34.968 16.587 1.00 91.30 ATOM 237 CA GLU 27 2.105 34.935 16.737 1.00 91.30 ATOM 238 C GLU 27 2.629 36.326 16.594 1.00 91.30 ATOM 239 O GLU 27 3.605 36.707 17.241 1.00 91.30 ATOM 241 CB GLU 27 2.731 33.992 15.707 1.00 91.30 ATOM 242 CD GLU 27 2.974 32.014 17.258 1.00 91.30 ATOM 243 CG GLU 27 2.421 32.523 15.942 1.00 91.30 ATOM 244 OE1 GLU 27 4.181 32.213 17.512 1.00 91.30 ATOM 245 OE2 GLU 27 2.201 31.416 18.036 1.00 91.30 ATOM 246 N LEU 28 1.989 37.098 15.698 1.00 91.09 ATOM 247 CA LEU 28 2.298 38.464 15.401 1.00 91.09 ATOM 248 C LEU 28 1.946 39.342 16.564 1.00 91.09 ATOM 249 O LEU 28 2.528 40.415 16.718 1.00 91.09 ATOM 251 CB LEU 28 1.556 38.919 14.143 1.00 91.09 ATOM 252 CG LEU 28 1.995 38.274 12.826 1.00 91.09 ATOM 253 CD1 LEU 28 1.081 38.699 11.687 1.00 91.09 ATOM 254 CD2 LEU 28 3.439 38.630 12.508 1.00 91.09 ATOM 255 N ARG 29 0.991 38.913 17.416 1.00 99.99 ATOM 256 CA ARG 29 0.510 39.742 18.483 1.00 99.99 ATOM 257 C ARG 29 -0.300 40.847 17.879 1.00 99.99 ATOM 258 O ARG 29 -0.173 42.018 18.235 1.00 99.99 ATOM 260 CB ARG 29 1.679 40.282 19.309 1.00 99.99 ATOM 261 CD ARG 29 3.615 39.810 20.835 1.00 99.99 ATOM 263 NE ARG 29 4.516 40.676 20.078 1.00 99.99 ATOM 264 CG ARG 29 2.534 39.204 19.954 1.00 99.99 ATOM 265 CZ ARG 29 5.525 40.235 19.335 1.00 99.99 ATOM 268 NH1 ARG 29 6.293 41.097 18.681 1.00 99.99 ATOM 271 NH2 ARG 29 5.766 38.934 19.246 1.00 99.99 ATOM 272 N VAL 30 -1.171 40.464 16.921 1.00 92.18 ATOM 273 CA VAL 30 -2.050 41.372 16.244 1.00 92.18 ATOM 274 C VAL 30 -3.457 40.954 16.560 1.00 92.18 ATOM 275 O VAL 30 -3.740 39.766 16.705 1.00 92.18 ATOM 277 CB VAL 30 -1.785 41.389 14.727 1.00 92.18 ATOM 278 CG1 VAL 30 -2.777 42.301 14.023 1.00 92.18 ATOM 279 CG2 VAL 30 -0.357 41.825 14.440 1.00 92.18 ATOM 280 N THR 31 -4.381 41.930 16.705 1.00 95.13 ATOM 281 CA THR 31 -5.744 41.565 16.971 1.00 95.13 ATOM 282 C THR 31 -6.600 42.136 15.888 1.00 95.13 ATOM 283 O THR 31 -6.093 42.751 14.955 1.00 95.13 ATOM 285 CB THR 31 -6.201 42.062 18.355 1.00 95.13 ATOM 287 OG1 THR 31 -6.231 43.495 18.365 1.00 95.13 ATOM 288 CG2 THR 31 -5.242 41.588 19.436 1.00 95.13 ATOM 289 N GLU 32 -7.931 41.975 16.003 1.00 98.39 ATOM 290 CA GLU 32 -8.837 42.304 14.939 1.00 98.39 ATOM 291 C GLU 32 -8.656 43.733 14.537 1.00 98.39 ATOM 292 O GLU 32 -8.679 44.057 13.350 1.00 98.39 ATOM 294 CB GLU 32 -10.282 42.042 15.366 1.00 98.39 ATOM 295 CD GLU 32 -12.046 40.350 16.006 1.00 98.39 ATOM 296 CG GLU 32 -10.631 40.569 15.508 1.00 98.39 ATOM 297 OE1 GLU 32 -12.689 41.337 16.421 1.00 98.39 ATOM 298 OE2 GLU 32 -12.511 39.192 15.982 1.00 98.39 ATOM 299 N ARG 33 -8.466 44.627 15.520 1.00 96.13 ATOM 300 CA ARG 33 -8.297 46.024 15.237 1.00 96.13 ATOM 301 C ARG 33 -7.037 46.257 14.467 1.00 96.13 ATOM 302 O ARG 33 -7.003 47.111 13.583 1.00 96.13 ATOM 304 CB ARG 33 -8.286 46.835 16.534 1.00 96.13 ATOM 305 CD ARG 33 -10.719 47.443 16.623 1.00 96.13 ATOM 307 NE ARG 33 -11.273 46.626 15.545 1.00 96.13 ATOM 308 CG ARG 33 -9.574 46.743 17.336 1.00 96.13 ATOM 309 CZ ARG 33 -12.064 45.574 15.735 1.00 96.13 ATOM 312 NH1 ARG 33 -12.520 44.892 14.694 1.00 96.13 ATOM 315 NH2 ARG 33 -12.395 45.208 16.966 1.00 96.13 ATOM 316 N PRO 34 -5.990 45.544 14.763 1.00 92.96 ATOM 317 CA PRO 34 -4.780 45.824 14.055 1.00 92.96 ATOM 318 C PRO 34 -4.858 45.644 12.582 1.00 92.96 ATOM 319 O PRO 34 -5.660 44.847 12.097 1.00 92.96 ATOM 320 CB PRO 34 -3.770 44.838 14.646 1.00 92.96 ATOM 321 CD PRO 34 -5.813 44.500 15.845 1.00 92.96 ATOM 322 CG PRO 34 -4.318 44.503 15.993 1.00 92.96 ATOM 323 N PHE 35 -4.011 46.406 11.865 1.00 96.38 ATOM 324 CA PHE 35 -4.024 46.490 10.437 1.00 96.38 ATOM 325 C PHE 35 -3.760 45.136 9.865 1.00 96.38 ATOM 326 O PHE 35 -4.344 44.765 8.848 1.00 96.38 ATOM 328 CB PHE 35 -2.989 47.506 9.950 1.00 96.38 ATOM 329 CG PHE 35 -2.950 47.663 8.457 1.00 96.38 ATOM 330 CZ PHE 35 -2.871 47.951 5.694 1.00 96.38 ATOM 331 CD1 PHE 35 -3.901 48.425 7.801 1.00 96.38 ATOM 332 CE1 PHE 35 -3.865 48.569 6.427 1.00 96.38 ATOM 333 CD2 PHE 35 -1.961 47.051 7.708 1.00 96.38 ATOM 334 CE2 PHE 35 -1.924 47.196 6.334 1.00 96.38 ATOM 335 N TRP 36 -2.867 44.364 10.504 1.00 95.24 ATOM 336 CA TRP 36 -2.510 43.059 10.029 1.00 95.24 ATOM 337 C TRP 36 -3.724 42.184 10.005 1.00 95.24 ATOM 338 O TRP 36 -3.808 41.257 9.204 1.00 95.24 ATOM 340 CB TRP 36 -1.416 42.450 10.908 1.00 95.24 ATOM 343 CG TRP 36 -0.078 43.104 10.741 1.00 95.24 ATOM 344 CD1 TRP 36 0.556 43.914 11.638 1.00 95.24 ATOM 346 NE1 TRP 36 1.766 44.326 11.134 1.00 95.24 ATOM 347 CD2 TRP 36 0.791 43.004 9.606 1.00 95.24 ATOM 348 CE2 TRP 36 1.931 43.779 9.885 1.00 95.24 ATOM 349 CH2 TRP 36 2.887 43.240 7.794 1.00 95.24 ATOM 350 CZ2 TRP 36 2.988 43.903 8.985 1.00 95.24 ATOM 351 CE3 TRP 36 0.713 42.336 8.380 1.00 95.24 ATOM 352 CZ3 TRP 36 1.763 42.462 7.491 1.00 95.24 ATOM 353 N ILE 37 -4.643 42.393 10.962 1.00 94.94 ATOM 354 CA ILE 37 -5.879 41.670 11.100 1.00 94.94 ATOM 355 C ILE 37 -6.942 42.021 10.096 1.00 94.94 ATOM 356 O ILE 37 -7.863 41.235 9.891 1.00 94.94 ATOM 358 CB ILE 37 -6.487 41.854 12.503 1.00 94.94 ATOM 359 CD1 ILE 37 -5.273 39.801 13.403 1.00 94.94 ATOM 360 CG1 ILE 37 -5.552 41.279 13.569 1.00 94.94 ATOM 361 CG2 ILE 37 -7.873 41.230 12.568 1.00 94.94 ATOM 362 N SER 38 -6.881 43.210 9.468 1.00 99.73 ATOM 363 CA SER 38 -7.928 43.708 8.608 1.00 99.73 ATOM 364 C SER 38 -8.436 42.658 7.650 1.00 99.73 ATOM 365 O SER 38 -9.647 42.475 7.538 1.00 99.73 ATOM 367 CB SER 38 -7.438 44.922 7.817 1.00 99.73 ATOM 369 OG SER 38 -7.171 46.018 8.676 1.00 99.73 ATOM 370 N SER 39 -7.551 41.924 6.948 1.00 92.93 ATOM 371 CA SER 39 -8.004 40.925 6.013 1.00 92.93 ATOM 372 C SER 39 -8.684 39.807 6.750 1.00 92.93 ATOM 373 O SER 39 -9.634 39.204 6.255 1.00 92.93 ATOM 375 CB SER 39 -6.831 40.394 5.186 1.00 92.93 ATOM 377 OG SER 39 -6.296 41.407 4.352 1.00 92.93 ATOM 378 N PHE 40 -8.208 39.521 7.972 1.00 97.71 ATOM 379 CA PHE 40 -8.704 38.485 8.833 1.00 97.71 ATOM 380 C PHE 40 -10.138 38.770 9.143 1.00 97.71 ATOM 381 O PHE 40 -10.964 37.860 9.191 1.00 97.71 ATOM 383 CB PHE 40 -7.863 38.398 10.107 1.00 97.71 ATOM 384 CG PHE 40 -8.311 37.324 11.057 1.00 97.71 ATOM 385 CZ PHE 40 -9.142 35.341 12.819 1.00 97.71 ATOM 386 CD1 PHE 40 -7.980 35.999 10.831 1.00 97.71 ATOM 387 CE1 PHE 40 -8.392 35.011 11.705 1.00 97.71 ATOM 388 CD2 PHE 40 -9.063 37.639 12.175 1.00 97.71 ATOM 389 CE2 PHE 40 -9.475 36.650 13.049 1.00 97.71 ATOM 390 N ILE 41 -10.467 40.055 9.359 1.00 95.27 ATOM 391 CA ILE 41 -11.804 40.454 9.691 1.00 95.27 ATOM 392 C ILE 41 -12.681 40.026 8.560 1.00 95.27 ATOM 393 O ILE 41 -13.807 39.577 8.771 1.00 95.27 ATOM 395 CB ILE 41 -11.892 41.969 9.952 1.00 95.27 ATOM 396 CD1 ILE 41 -10.935 43.822 11.417 1.00 95.27 ATOM 397 CG1 ILE 41 -11.140 42.335 11.233 1.00 95.27 ATOM 398 CG2 ILE 41 -13.345 42.418 9.999 1.00 95.27 ATOM 399 N GLY 42 -12.174 40.154 7.319 1.00 97.70 ATOM 400 CA GLY 42 -12.932 39.776 6.164 1.00 97.70 ATOM 401 C GLY 42 -13.234 41.017 5.395 1.00 97.70 ATOM 402 O GLY 42 -13.442 40.965 4.184 1.00 97.70 ATOM 404 N ARG 43 -13.250 42.173 6.083 1.00 94.00 ATOM 405 CA ARG 43 -13.518 43.409 5.412 1.00 94.00 ATOM 406 C ARG 43 -12.263 43.850 4.730 1.00 94.00 ATOM 407 O ARG 43 -11.162 43.457 5.113 1.00 94.00 ATOM 409 CB ARG 43 -14.021 44.459 6.404 1.00 94.00 ATOM 410 CD ARG 43 -15.775 45.176 8.050 1.00 94.00 ATOM 412 NE ARG 43 -14.886 45.161 9.210 1.00 94.00 ATOM 413 CG ARG 43 -15.376 44.139 7.014 1.00 94.00 ATOM 414 CZ ARG 43 -14.921 46.059 10.189 1.00 94.00 ATOM 417 NH1 ARG 43 -14.073 45.966 11.203 1.00 94.00 ATOM 420 NH2 ARG 43 -15.803 47.048 10.150 1.00 94.00 ATOM 421 N SER 44 -12.417 44.657 3.661 1.00 98.92 ATOM 422 CA SER 44 -11.294 45.182 2.941 1.00 98.92 ATOM 423 C SER 44 -10.930 46.487 3.572 1.00 98.92 ATOM 424 O SER 44 -11.494 46.872 4.594 1.00 98.92 ATOM 426 CB SER 44 -11.632 45.335 1.457 1.00 98.92 ATOM 428 OG SER 44 -12.588 46.363 1.256 1.00 98.92 ATOM 429 N LYS 45 -9.949 47.196 2.978 1.00 92.83 ATOM 430 CA LYS 45 -9.513 48.440 3.538 1.00 92.83 ATOM 431 C LYS 45 -10.618 49.442 3.469 1.00 92.83 ATOM 432 O LYS 45 -10.777 50.255 4.377 1.00 92.83 ATOM 434 CB LYS 45 -8.271 48.952 2.806 1.00 92.83 ATOM 435 CD LYS 45 -6.408 50.628 2.676 1.00 92.83 ATOM 436 CE LYS 45 -5.836 51.916 3.248 1.00 92.83 ATOM 437 CG LYS 45 -7.700 50.239 3.376 1.00 92.83 ATOM 441 NZ LYS 45 -4.571 52.310 2.570 1.00 92.83 TER END