####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS241_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 17 - 45 4.83 7.86 LCS_AVERAGE: 62.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.89 9.87 LCS_AVERAGE: 24.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 0.76 10.05 LCS_AVERAGE: 17.77 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 25 3 3 4 4 5 7 10 10 12 13 16 22 27 30 32 34 37 38 39 40 LCS_GDT V 3 V 3 4 6 25 3 3 4 5 5 7 10 12 16 17 22 22 27 30 32 34 37 38 39 40 LCS_GDT Q 4 Q 4 4 6 25 3 3 4 5 5 7 10 12 16 17 22 22 25 28 31 34 37 38 39 40 LCS_GDT G 5 G 5 4 6 25 0 3 4 5 6 7 10 12 16 17 22 22 27 28 28 32 35 38 39 40 LCS_GDT P 6 P 6 4 6 25 3 3 5 5 9 13 14 19 20 24 26 27 29 30 32 34 37 38 39 40 LCS_GDT W 7 W 7 4 6 25 3 3 7 11 16 18 20 22 24 26 27 29 29 30 32 34 37 38 39 40 LCS_GDT V 8 V 8 5 6 25 4 6 6 10 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT G 9 G 9 5 6 25 4 4 5 13 14 16 19 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 10 S 10 5 6 25 4 4 5 6 8 10 14 17 18 19 23 28 30 31 34 34 37 38 39 40 LCS_GDT S 11 S 11 5 6 25 4 4 5 6 8 10 11 15 18 23 25 28 30 31 34 34 37 38 39 40 LCS_GDT Y 12 Y 12 5 6 25 4 4 5 5 8 10 11 13 16 18 23 27 30 31 34 34 37 38 39 40 LCS_GDT V 13 V 13 5 6 25 4 5 5 5 6 6 9 12 15 17 23 27 29 31 34 34 37 38 39 40 LCS_GDT A 14 A 14 5 5 25 4 5 5 5 8 10 11 13 16 17 22 22 24 27 29 33 34 36 39 40 LCS_GDT E 15 E 15 5 5 25 4 5 5 5 5 5 9 13 16 17 22 22 22 23 26 29 32 35 37 40 LCS_GDT T 16 T 16 5 5 28 4 5 5 6 8 10 11 13 16 17 22 23 27 31 34 34 37 38 39 40 LCS_GDT G 17 G 17 5 5 29 3 5 5 5 5 5 8 10 13 16 22 24 27 31 34 34 37 38 39 40 LCS_GDT Q 18 Q 18 4 4 29 3 3 4 6 8 10 11 13 16 17 23 27 29 31 34 34 37 38 39 40 LCS_GDT N 19 N 19 4 15 29 3 3 4 4 5 8 14 19 23 25 26 28 30 31 34 34 37 38 39 40 LCS_GDT W 20 W 20 14 16 29 8 12 14 14 14 15 17 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 21 A 21 14 16 29 10 12 14 14 14 16 19 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 22 S 22 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT L 23 L 23 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 24 A 24 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT A 25 A 25 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT N 26 N 26 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT E 27 E 27 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT L 28 L 28 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT R 29 R 29 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT V 30 V 30 14 16 29 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT T 31 T 31 14 16 29 3 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT E 32 E 32 14 16 29 6 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT R 33 R 33 14 16 29 5 9 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT P 34 P 34 4 16 29 2 4 5 5 8 13 15 20 22 25 27 29 30 31 34 34 37 38 39 40 LCS_GDT F 35 F 35 5 16 29 2 5 7 10 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT W 36 W 36 5 11 29 5 6 7 10 13 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT I 37 I 37 5 11 29 5 6 7 11 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 38 S 38 5 11 29 5 6 7 10 12 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT S 39 S 39 6 11 29 5 6 7 10 12 15 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT F 40 F 40 6 11 29 4 5 7 10 12 17 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT I 41 I 41 6 11 29 4 5 6 10 15 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 LCS_GDT G 42 G 42 6 11 29 4 5 6 10 12 16 20 23 25 26 27 29 30 31 34 34 37 38 38 40 LCS_GDT R 43 R 43 6 11 29 4 5 7 10 12 14 18 23 25 26 27 29 30 31 34 34 35 38 38 40 LCS_GDT S 44 S 44 6 11 29 4 5 7 10 12 14 16 18 20 25 27 29 29 30 31 32 33 35 35 36 LCS_GDT K 45 K 45 6 11 29 3 4 7 10 12 14 16 18 20 23 26 29 29 30 30 32 33 33 34 35 LCS_AVERAGE LCS_A: 35.12 ( 17.77 24.64 62.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 16 18 20 23 25 26 27 29 30 31 34 34 37 38 39 40 GDT PERCENT_AT 22.73 27.27 31.82 31.82 36.36 40.91 45.45 52.27 56.82 59.09 61.36 65.91 68.18 70.45 77.27 77.27 84.09 86.36 88.64 90.91 GDT RMS_LOCAL 0.32 0.58 0.76 0.76 1.82 2.10 2.33 2.74 2.93 3.03 3.16 3.56 3.99 4.31 5.01 5.01 5.89 6.03 6.24 6.22 GDT RMS_ALL_AT 9.89 9.72 10.05 10.05 8.75 8.63 8.50 8.19 8.26 8.37 8.41 8.77 7.74 7.63 7.50 7.50 7.33 7.38 7.41 7.21 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.215 0 0.062 0.084 14.327 0.000 0.000 - LGA V 3 V 3 12.245 0 0.053 0.141 12.733 0.000 0.000 11.202 LGA Q 4 Q 4 14.128 0 0.377 0.877 16.905 0.000 0.000 15.225 LGA G 5 G 5 12.352 0 0.151 0.151 13.113 0.000 0.000 - LGA P 6 P 6 8.855 0 0.678 0.594 10.965 0.000 0.000 9.412 LGA W 7 W 7 4.813 0 0.420 1.201 9.777 11.818 5.714 9.454 LGA V 8 V 8 2.300 0 0.634 0.880 6.496 28.636 19.740 6.496 LGA G 9 G 9 4.446 0 0.173 0.173 7.422 5.909 5.909 - LGA S 10 S 10 9.589 0 0.069 0.192 12.004 0.000 0.000 8.500 LGA S 11 S 11 9.069 0 0.253 0.641 11.924 0.000 0.000 9.120 LGA Y 12 Y 12 10.206 0 0.601 1.218 13.912 0.000 0.909 5.086 LGA V 13 V 13 13.825 0 0.637 0.614 15.344 0.000 0.000 15.344 LGA A 14 A 14 17.923 0 0.027 0.027 19.544 0.000 0.000 - LGA E 15 E 15 18.924 0 0.018 1.449 26.316 0.000 0.000 26.316 LGA T 16 T 16 14.715 0 0.142 1.130 15.928 0.000 0.000 13.587 LGA G 17 G 17 14.155 0 0.190 0.190 14.155 0.000 0.000 - LGA Q 18 Q 18 12.257 0 0.595 0.975 19.699 0.000 0.000 16.683 LGA N 19 N 19 7.316 0 0.047 0.993 11.394 0.455 0.227 11.394 LGA W 20 W 20 4.660 0 0.579 1.464 15.349 6.364 1.818 15.349 LGA A 21 A 21 3.744 0 0.035 0.037 4.205 20.455 17.455 - LGA S 22 S 22 1.802 0 0.049 0.619 2.658 56.364 48.485 2.636 LGA L 23 L 23 1.626 0 0.044 0.189 4.211 66.364 41.818 4.211 LGA A 24 A 24 1.289 0 0.018 0.022 2.146 65.455 60.000 - LGA A 25 A 25 1.666 0 0.048 0.050 2.303 51.364 51.273 - LGA N 26 N 26 1.629 0 0.054 0.073 2.397 51.364 51.136 1.727 LGA E 27 E 27 1.772 0 0.053 0.828 4.361 45.455 41.414 4.361 LGA L 28 L 28 2.705 0 0.038 0.079 3.584 23.636 26.818 2.645 LGA R 29 R 29 3.261 0 0.050 1.561 10.799 18.636 8.430 10.799 LGA V 30 V 30 3.066 0 0.072 0.102 3.306 25.000 23.377 3.122 LGA T 31 T 31 2.493 0 0.045 0.059 2.708 35.455 35.065 2.450 LGA E 32 E 32 2.449 0 0.157 0.791 3.703 35.455 26.061 2.973 LGA R 33 R 33 2.913 0 0.122 1.338 6.062 14.091 11.570 3.630 LGA P 34 P 34 5.568 0 0.415 0.599 8.170 2.727 1.558 8.170 LGA F 35 F 35 1.764 0 0.581 1.391 8.903 47.727 18.678 8.903 LGA W 36 W 36 3.172 0 0.018 1.241 9.945 30.455 10.260 6.769 LGA I 37 I 37 2.117 0 0.048 0.376 3.609 38.636 30.909 3.609 LGA S 38 S 38 3.352 0 0.015 0.073 4.342 15.455 12.121 4.342 LGA S 39 S 39 3.812 0 0.127 0.166 4.724 14.545 10.303 4.611 LGA F 40 F 40 2.524 0 0.072 0.900 4.032 38.636 26.281 4.032 LGA I 41 I 41 2.304 0 0.641 1.556 6.399 38.636 23.409 6.399 LGA G 42 G 42 3.805 0 0.060 0.060 5.296 8.636 8.636 - LGA R 43 R 43 5.126 0 0.021 1.166 11.375 1.364 0.826 11.375 LGA S 44 S 44 8.014 0 0.095 0.681 10.268 0.000 0.000 10.268 LGA K 45 K 45 9.209 0 0.669 0.747 13.343 0.000 0.000 13.343 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.126 7.063 8.013 18.161 14.095 6.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 23 2.74 47.159 42.483 0.810 LGA_LOCAL RMSD: 2.741 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.186 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.126 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.909223 * X + 0.012455 * Y + -0.416124 * Z + 2.609870 Y_new = 0.402269 * X + 0.283689 * Y + -0.870460 * Z + 70.580772 Z_new = 0.107208 * X + -0.958836 * Y + -0.262946 * Z + 19.795898 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.725050 -0.107414 -1.838451 [DEG: 156.1339 -6.1544 -105.3355 ] ZXZ: -0.445934 1.836871 3.030245 [DEG: -25.5502 105.2450 173.6202 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS241_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 23 2.74 42.483 7.13 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS241_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 -1.460 29.201 13.254 1.00 0.00 ATOM 22 CA ALA 2 -0.964 29.892 12.064 1.00 0.00 ATOM 24 CB ALA 2 0.408 30.453 12.341 1.00 0.00 ATOM 28 C ALA 2 -0.915 28.978 10.839 1.00 0.00 ATOM 29 O ALA 2 -0.600 27.784 10.944 1.00 0.00 ATOM 30 N VAL 3 -1.205 29.564 9.675 1.00 0.00 ATOM 32 CA VAL 3 -1.218 28.860 8.395 1.00 0.00 ATOM 34 CB VAL 3 -1.671 29.821 7.278 1.00 0.00 ATOM 36 CG1 VAL 3 -1.553 29.152 5.940 1.00 0.00 ATOM 40 CG2 VAL 3 -3.105 30.270 7.517 1.00 0.00 ATOM 44 C VAL 3 0.150 28.310 8.016 1.00 0.00 ATOM 45 O VAL 3 1.138 29.040 7.947 1.00 0.00 ATOM 46 N GLN 4 0.201 27.026 7.685 1.00 0.00 ATOM 48 CA GLN 4 1.472 26.392 7.354 1.00 0.00 ATOM 50 CB GLN 4 1.426 24.924 7.769 1.00 0.00 ATOM 53 CG GLN 4 1.176 24.732 9.278 1.00 0.00 ATOM 56 CD GLN 4 2.309 25.274 10.150 1.00 0.00 ATOM 57 OE1 GLN 4 3.439 24.772 10.100 1.00 0.00 ATOM 58 NE2 GLN 4 2.011 26.296 10.959 1.00 0.00 ATOM 61 C GLN 4 1.832 26.540 5.874 1.00 0.00 ATOM 62 O GLN 4 1.828 25.573 5.111 1.00 0.00 ATOM 63 N GLY 5 2.118 27.776 5.494 1.00 0.00 ATOM 65 CA GLY 5 2.466 28.148 4.124 1.00 0.00 ATOM 68 C GLY 5 3.933 28.585 4.055 1.00 0.00 ATOM 69 O GLY 5 4.752 28.122 4.850 1.00 0.00 ATOM 70 N PRO 6 4.298 29.448 3.089 1.00 0.00 ATOM 71 CD PRO 6 3.339 29.764 1.987 1.00 0.00 ATOM 74 CG PRO 6 4.240 30.359 0.936 1.00 0.00 ATOM 77 CB PRO 6 5.416 30.951 1.703 1.00 0.00 ATOM 80 CA PRO 6 5.623 30.011 2.891 1.00 0.00 ATOM 82 C PRO 6 6.142 30.759 4.114 1.00 0.00 ATOM 83 O PRO 6 5.377 31.295 4.918 1.00 0.00 ATOM 84 N TRP 7 7.461 30.752 4.270 1.00 0.00 ATOM 86 CA TRP 7 8.177 31.412 5.367 1.00 0.00 ATOM 88 CB TRP 7 9.677 31.140 5.194 1.00 0.00 ATOM 91 CG TRP 7 10.290 31.839 4.014 1.00 0.00 ATOM 92 CD1 TRP 7 10.351 31.394 2.726 1.00 0.00 ATOM 94 NE1 TRP 7 11.014 32.309 1.941 1.00 0.00 ATOM 96 CE2 TRP 7 11.425 33.355 2.731 1.00 0.00 ATOM 97 CZ2 TRP 7 12.131 34.500 2.401 1.00 0.00 ATOM 99 CH2 TRP 7 12.425 35.396 3.430 1.00 0.00 ATOM 101 CZ3 TRP 7 12.038 35.158 4.724 1.00 0.00 ATOM 103 CE3 TRP 7 11.327 34.011 5.057 1.00 0.00 ATOM 105 CD2 TRP 7 11.008 33.096 4.039 1.00 0.00 ATOM 106 C TRP 7 7.926 32.927 5.502 1.00 0.00 ATOM 107 O TRP 7 8.101 33.488 6.586 1.00 0.00 ATOM 108 N VAL 8 7.547 33.595 4.405 1.00 0.00 ATOM 110 CA VAL 8 7.363 35.045 4.425 1.00 0.00 ATOM 112 CB VAL 8 8.463 35.711 3.584 1.00 0.00 ATOM 114 CG1 VAL 8 8.323 35.272 2.144 1.00 0.00 ATOM 118 CG2 VAL 8 8.444 37.217 3.735 1.00 0.00 ATOM 122 C VAL 8 6.011 35.474 3.880 1.00 0.00 ATOM 123 O VAL 8 5.529 34.954 2.874 1.00 0.00 ATOM 124 N GLY 9 5.433 36.487 4.512 1.00 0.00 ATOM 126 CA GLY 9 4.131 37.029 4.141 1.00 0.00 ATOM 129 C GLY 9 4.010 37.486 2.681 1.00 0.00 ATOM 130 O GLY 9 2.933 37.419 2.084 1.00 0.00 ATOM 131 N SER 10 5.113 37.933 2.093 1.00 0.00 ATOM 133 CA SER 10 5.138 38.416 0.716 1.00 0.00 ATOM 135 CB SER 10 6.478 39.058 0.410 1.00 0.00 ATOM 138 OG SER 10 7.509 38.115 0.421 1.00 0.00 ATOM 140 C SER 10 4.836 37.331 -0.326 1.00 0.00 ATOM 141 O SER 10 4.576 37.644 -1.489 1.00 0.00 ATOM 142 N SER 11 4.901 36.061 0.073 1.00 0.00 ATOM 144 CA SER 11 4.634 34.945 -0.827 1.00 0.00 ATOM 146 CB SER 11 5.592 33.816 -0.539 1.00 0.00 ATOM 149 OG SER 11 6.915 34.187 -0.828 1.00 0.00 ATOM 151 C SER 11 3.187 34.431 -0.766 1.00 0.00 ATOM 152 O SER 11 2.856 33.434 -1.410 1.00 0.00 ATOM 153 N TYR 12 2.332 35.086 0.020 1.00 0.00 ATOM 155 CA TYR 12 0.956 34.618 0.195 1.00 0.00 ATOM 157 CB TYR 12 0.562 34.819 1.653 1.00 0.00 ATOM 160 CG TYR 12 1.149 33.832 2.573 1.00 0.00 ATOM 161 CD1 TYR 12 2.463 33.890 2.897 1.00 0.00 ATOM 163 CE1 TYR 12 2.980 32.985 3.760 1.00 0.00 ATOM 165 CZ TYR 12 2.157 32.015 4.334 1.00 0.00 ATOM 166 OH TYR 12 2.687 31.120 5.216 1.00 0.00 ATOM 168 CE2 TYR 12 0.830 31.971 4.024 1.00 0.00 ATOM 170 CD2 TYR 12 0.330 32.884 3.135 1.00 0.00 ATOM 172 C TYR 12 -0.142 35.237 -0.664 1.00 0.00 ATOM 173 O TYR 12 -0.169 36.436 -0.947 1.00 0.00 ATOM 174 N VAL 13 -1.110 34.382 -0.994 1.00 0.00 ATOM 176 CA VAL 13 -2.368 34.763 -1.622 1.00 0.00 ATOM 178 CB VAL 13 -3.225 33.526 -1.947 1.00 0.00 ATOM 180 CG1 VAL 13 -4.608 33.948 -2.445 1.00 0.00 ATOM 184 CG2 VAL 13 -2.509 32.691 -2.987 1.00 0.00 ATOM 188 C VAL 13 -3.044 35.605 -0.583 1.00 0.00 ATOM 189 O VAL 13 -3.021 35.218 0.582 1.00 0.00 ATOM 190 N ALA 14 -3.631 36.739 -0.942 1.00 0.00 ATOM 192 CA ALA 14 -4.180 37.573 0.115 1.00 0.00 ATOM 194 CB ALA 14 -4.859 38.791 -0.474 1.00 0.00 ATOM 198 C ALA 14 -5.173 36.849 1.020 1.00 0.00 ATOM 199 O ALA 14 -5.099 37.014 2.228 1.00 0.00 ATOM 200 N GLU 15 -6.045 35.996 0.495 1.00 0.00 ATOM 202 CA GLU 15 -6.991 35.348 1.406 1.00 0.00 ATOM 204 CB GLU 15 -7.999 34.520 0.604 1.00 0.00 ATOM 207 CG GLU 15 -8.980 35.350 -0.226 1.00 0.00 ATOM 210 CD GLU 15 -9.913 34.507 -1.065 1.00 0.00 ATOM 211 OE1 GLU 15 -9.726 33.313 -1.113 1.00 0.00 ATOM 212 OE2 GLU 15 -10.813 35.059 -1.655 1.00 0.00 ATOM 213 C GLU 15 -6.275 34.453 2.433 1.00 0.00 ATOM 214 O GLU 15 -6.629 34.425 3.620 1.00 0.00 ATOM 215 N THR 16 -5.249 33.738 1.976 1.00 0.00 ATOM 217 CA THR 16 -4.504 32.833 2.836 1.00 0.00 ATOM 219 CB THR 16 -3.596 31.904 2.019 1.00 0.00 ATOM 221 CG2 THR 16 -2.886 30.977 2.954 1.00 0.00 ATOM 225 OG1 THR 16 -4.383 31.123 1.106 1.00 0.00 ATOM 227 C THR 16 -3.662 33.629 3.823 1.00 0.00 ATOM 228 O THR 16 -3.560 33.295 5.006 1.00 0.00 ATOM 229 N GLY 17 -3.026 34.673 3.306 1.00 0.00 ATOM 231 CA GLY 17 -2.176 35.551 4.078 1.00 0.00 ATOM 234 C GLY 17 -2.957 36.261 5.174 1.00 0.00 ATOM 235 O GLY 17 -2.432 36.550 6.256 1.00 0.00 ATOM 236 N GLN 18 -4.213 36.591 4.889 1.00 0.00 ATOM 238 CA GLN 18 -5.064 37.202 5.886 1.00 0.00 ATOM 240 CB GLN 18 -6.359 37.672 5.238 1.00 0.00 ATOM 243 CG GLN 18 -6.197 38.917 4.337 1.00 0.00 ATOM 246 CD GLN 18 -7.419 39.234 3.501 1.00 0.00 ATOM 247 OE1 GLN 18 -8.529 38.742 3.748 1.00 0.00 ATOM 248 NE2 GLN 18 -7.222 40.067 2.476 1.00 0.00 ATOM 251 C GLN 18 -5.302 36.201 7.004 1.00 0.00 ATOM 252 O GLN 18 -5.170 36.539 8.183 1.00 0.00 ATOM 253 N ASN 19 -5.536 34.932 6.642 1.00 0.00 ATOM 255 CA ASN 19 -5.702 33.908 7.662 1.00 0.00 ATOM 257 CB ASN 19 -6.184 32.604 7.063 1.00 0.00 ATOM 260 CG ASN 19 -7.634 32.648 6.683 1.00 0.00 ATOM 261 OD1 ASN 19 -8.408 33.467 7.200 1.00 0.00 ATOM 262 ND2 ASN 19 -8.031 31.776 5.789 1.00 0.00 ATOM 265 C ASN 19 -4.412 33.700 8.451 1.00 0.00 ATOM 266 O ASN 19 -4.465 33.538 9.672 1.00 0.00 ATOM 267 N TRP 20 -3.243 33.778 7.796 1.00 0.00 ATOM 269 CA TRP 20 -1.994 33.610 8.543 1.00 0.00 ATOM 271 CB TRP 20 -0.716 33.661 7.683 1.00 0.00 ATOM 274 CG TRP 20 0.579 33.484 8.561 1.00 0.00 ATOM 275 CD1 TRP 20 0.582 33.238 9.887 1.00 0.00 ATOM 277 NE1 TRP 20 1.893 33.147 10.362 1.00 0.00 ATOM 279 CE2 TRP 20 2.747 33.324 9.338 1.00 0.00 ATOM 280 CZ2 TRP 20 4.135 33.316 9.326 1.00 0.00 ATOM 282 CH2 TRP 20 4.774 33.529 8.110 1.00 0.00 ATOM 284 CZ3 TRP 20 4.066 33.736 6.982 1.00 0.00 ATOM 286 CE3 TRP 20 2.668 33.738 7.003 1.00 0.00 ATOM 288 CD2 TRP 20 2.000 33.531 8.182 1.00 0.00 ATOM 289 C TRP 20 -1.907 34.667 9.619 1.00 0.00 ATOM 290 O TRP 20 -1.675 34.357 10.782 1.00 0.00 ATOM 291 N ALA 21 -2.069 35.933 9.233 1.00 0.00 ATOM 293 CA ALA 21 -1.965 37.004 10.215 1.00 0.00 ATOM 295 CB ALA 21 -2.093 38.347 9.531 1.00 0.00 ATOM 299 C ALA 21 -3.020 36.875 11.313 1.00 0.00 ATOM 300 O ALA 21 -2.726 37.108 12.487 1.00 0.00 ATOM 301 N SER 22 -4.246 36.479 10.954 1.00 0.00 ATOM 303 CA SER 22 -5.313 36.365 11.943 1.00 0.00 ATOM 305 CB SER 22 -6.619 36.010 11.253 1.00 0.00 ATOM 308 OG SER 22 -7.681 35.907 12.170 1.00 0.00 ATOM 310 C SER 22 -4.993 35.304 12.981 1.00 0.00 ATOM 311 O SER 22 -5.065 35.528 14.195 1.00 0.00 ATOM 312 N LEU 23 -4.635 34.137 12.490 1.00 0.00 ATOM 314 CA LEU 23 -4.351 33.010 13.335 1.00 0.00 ATOM 316 CB LEU 23 -4.316 31.799 12.425 1.00 0.00 ATOM 319 CG LEU 23 -5.709 31.465 11.827 1.00 0.00 ATOM 321 CD1 LEU 23 -5.609 30.429 10.723 1.00 0.00 ATOM 325 CD2 LEU 23 -6.596 30.955 12.950 1.00 0.00 ATOM 329 C LEU 23 -3.072 33.251 14.138 1.00 0.00 ATOM 330 O LEU 23 -3.017 32.941 15.333 1.00 0.00 ATOM 331 N ALA 24 -2.063 33.868 13.506 1.00 0.00 ATOM 333 CA ALA 24 -0.830 34.202 14.201 1.00 0.00 ATOM 335 CB ALA 24 0.182 34.795 13.250 1.00 0.00 ATOM 339 C ALA 24 -1.109 35.194 15.310 1.00 0.00 ATOM 340 O ALA 24 -0.559 35.073 16.397 1.00 0.00 ATOM 341 N ALA 25 -1.997 36.152 15.068 1.00 0.00 ATOM 343 CA ALA 25 -2.330 37.146 16.068 1.00 0.00 ATOM 345 CB ALA 25 -3.346 38.097 15.513 1.00 0.00 ATOM 349 C ALA 25 -2.861 36.476 17.309 1.00 0.00 ATOM 350 O ALA 25 -2.591 36.902 18.435 1.00 0.00 ATOM 351 N ASN 26 -3.620 35.398 17.128 1.00 0.00 ATOM 353 CA ASN 26 -4.112 34.709 18.299 1.00 0.00 ATOM 355 CB ASN 26 -5.156 33.682 17.915 1.00 0.00 ATOM 358 CG ASN 26 -6.450 34.279 17.461 1.00 0.00 ATOM 359 OD1 ASN 26 -6.775 35.445 17.725 1.00 0.00 ATOM 360 ND2 ASN 26 -7.218 33.480 16.770 1.00 0.00 ATOM 363 C ASN 26 -2.923 34.057 19.036 1.00 0.00 ATOM 364 O ASN 26 -2.781 34.207 20.253 1.00 0.00 ATOM 365 N GLU 27 -2.002 33.427 18.284 1.00 0.00 ATOM 367 CA GLU 27 -0.834 32.752 18.890 1.00 0.00 ATOM 369 CB GLU 27 0.046 32.045 17.829 1.00 0.00 ATOM 372 CG GLU 27 -0.563 30.829 17.133 1.00 0.00 ATOM 375 CD GLU 27 0.379 30.133 16.156 1.00 0.00 ATOM 376 OE1 GLU 27 1.447 30.637 15.908 1.00 0.00 ATOM 377 OE2 GLU 27 0.012 29.074 15.651 1.00 0.00 ATOM 378 C GLU 27 0.071 33.742 19.630 1.00 0.00 ATOM 379 O GLU 27 0.648 33.437 20.676 1.00 0.00 ATOM 380 N LEU 28 0.181 34.928 19.053 1.00 0.00 ATOM 382 CA LEU 28 1.019 36.022 19.502 1.00 0.00 ATOM 384 CB LEU 28 1.358 36.887 18.287 1.00 0.00 ATOM 387 CG LEU 28 2.203 36.246 17.191 1.00 0.00 ATOM 389 CD1 LEU 28 2.240 37.201 16.005 1.00 0.00 ATOM 393 CD2 LEU 28 3.585 35.970 17.720 1.00 0.00 ATOM 397 C LEU 28 0.362 36.908 20.564 1.00 0.00 ATOM 398 O LEU 28 0.970 37.878 21.014 1.00 0.00 ATOM 399 N ARG 29 -0.886 36.605 20.942 1.00 0.00 ATOM 401 CA ARG 29 -1.650 37.392 21.914 1.00 0.00 ATOM 403 CB ARG 29 -0.999 37.317 23.290 1.00 0.00 ATOM 406 CG ARG 29 -0.896 35.910 23.870 1.00 0.00 ATOM 409 CD ARG 29 -0.310 35.924 25.241 1.00 0.00 ATOM 412 NE ARG 29 -0.176 34.582 25.793 1.00 0.00 ATOM 414 CZ ARG 29 0.383 34.298 26.987 1.00 0.00 ATOM 415 NH1 ARG 29 0.852 35.268 27.742 1.00 0.00 ATOM 418 NH2 ARG 29 0.461 33.045 27.400 1.00 0.00 ATOM 421 C ARG 29 -1.802 38.866 21.511 1.00 0.00 ATOM 422 O ARG 29 -1.690 39.768 22.347 1.00 0.00 ATOM 423 N VAL 30 -2.079 39.106 20.233 1.00 0.00 ATOM 425 CA VAL 30 -2.275 40.450 19.702 1.00 0.00 ATOM 427 CB VAL 30 -1.833 40.467 18.228 1.00 0.00 ATOM 429 CG1 VAL 30 -2.101 41.808 17.562 1.00 0.00 ATOM 433 CG2 VAL 30 -0.373 40.126 18.180 1.00 0.00 ATOM 437 C VAL 30 -3.726 40.900 19.858 1.00 0.00 ATOM 438 O VAL 30 -4.653 40.186 19.484 1.00 0.00 ATOM 439 N THR 31 -3.916 42.094 20.430 1.00 0.00 ATOM 441 CA THR 31 -5.253 42.647 20.664 1.00 0.00 ATOM 443 CB THR 31 -5.302 43.341 22.034 1.00 0.00 ATOM 445 CG2 THR 31 -4.924 42.350 23.134 1.00 0.00 ATOM 449 OG1 THR 31 -4.374 44.437 22.048 1.00 0.00 ATOM 451 C THR 31 -5.666 43.636 19.572 1.00 0.00 ATOM 452 O THR 31 -6.806 44.099 19.527 1.00 0.00 ATOM 453 N GLU 32 -4.714 43.959 18.716 1.00 0.00 ATOM 455 CA GLU 32 -4.868 44.888 17.604 1.00 0.00 ATOM 457 CB GLU 32 -3.557 45.638 17.373 1.00 0.00 ATOM 460 CG GLU 32 -3.184 46.500 18.587 1.00 0.00 ATOM 463 CD GLU 32 -1.888 47.234 18.472 1.00 0.00 ATOM 464 OE1 GLU 32 -1.130 46.926 17.600 1.00 0.00 ATOM 465 OE2 GLU 32 -1.660 48.109 19.274 1.00 0.00 ATOM 466 C GLU 32 -5.345 44.085 16.403 1.00 0.00 ATOM 467 O GLU 32 -5.481 42.871 16.507 1.00 0.00 ATOM 468 N ARG 33 -5.707 44.745 15.308 1.00 0.00 ATOM 470 CA ARG 33 -6.259 44.012 14.170 1.00 0.00 ATOM 472 CB ARG 33 -7.342 44.842 13.530 1.00 0.00 ATOM 475 CG ARG 33 -8.537 45.119 14.414 1.00 0.00 ATOM 478 CD ARG 33 -9.419 43.910 14.511 1.00 0.00 ATOM 481 NE ARG 33 -8.950 42.944 15.512 1.00 0.00 ATOM 483 CZ ARG 33 -9.437 41.690 15.657 1.00 0.00 ATOM 484 NH1 ARG 33 -10.410 41.264 14.879 1.00 0.00 ATOM 487 NH2 ARG 33 -8.940 40.882 16.581 1.00 0.00 ATOM 490 C ARG 33 -5.225 43.550 13.092 1.00 0.00 ATOM 491 O ARG 33 -4.600 44.362 12.414 1.00 0.00 ATOM 492 N PRO 34 -5.029 42.225 12.914 1.00 0.00 ATOM 493 CD PRO 34 -5.831 41.260 13.674 1.00 0.00 ATOM 496 CG PRO 34 -5.364 39.960 13.154 1.00 0.00 ATOM 499 CB PRO 34 -3.983 40.204 12.616 1.00 0.00 ATOM 502 CA PRO 34 -4.054 41.587 12.028 1.00 0.00 ATOM 504 C PRO 34 -4.487 41.499 10.572 1.00 0.00 ATOM 505 O PRO 34 -4.741 40.423 10.055 1.00 0.00 ATOM 506 N PHE 35 -4.594 42.644 9.934 1.00 0.00 ATOM 508 CA PHE 35 -5.126 42.748 8.565 1.00 0.00 ATOM 510 CB PHE 35 -4.735 44.088 8.012 1.00 0.00 ATOM 513 CG PHE 35 -5.339 45.093 8.730 1.00 0.00 ATOM 514 CD1 PHE 35 -6.348 44.801 9.598 1.00 0.00 ATOM 516 CE1 PHE 35 -6.910 45.780 10.321 1.00 0.00 ATOM 518 CZ PHE 35 -6.499 46.999 10.201 1.00 0.00 ATOM 520 CE2 PHE 35 -5.489 47.290 9.321 1.00 0.00 ATOM 522 CD2 PHE 35 -4.920 46.342 8.600 1.00 0.00 ATOM 524 C PHE 35 -4.643 41.724 7.555 1.00 0.00 ATOM 525 O PHE 35 -5.441 41.078 6.886 1.00 0.00 ATOM 526 N TRP 36 -3.330 41.665 7.362 1.00 0.00 ATOM 528 CA TRP 36 -2.741 40.780 6.366 1.00 0.00 ATOM 530 CB TRP 36 -3.033 41.348 4.960 1.00 0.00 ATOM 533 CG TRP 36 -2.511 40.589 3.767 1.00 0.00 ATOM 534 CD1 TRP 36 -2.206 39.298 3.696 1.00 0.00 ATOM 536 NE1 TRP 36 -1.750 38.975 2.456 1.00 0.00 ATOM 538 CE2 TRP 36 -1.791 40.067 1.676 1.00 0.00 ATOM 539 CZ2 TRP 36 -1.446 40.221 0.349 1.00 0.00 ATOM 541 CH2 TRP 36 -1.602 41.486 -0.208 1.00 0.00 ATOM 543 CZ3 TRP 36 -2.079 42.543 0.533 1.00 0.00 ATOM 545 CE3 TRP 36 -2.421 42.383 1.869 1.00 0.00 ATOM 547 CD2 TRP 36 -2.272 41.118 2.448 1.00 0.00 ATOM 548 C TRP 36 -1.263 40.582 6.621 1.00 0.00 ATOM 549 O TRP 36 -0.513 41.553 6.850 1.00 0.00 ATOM 550 N ILE 37 -0.833 39.335 6.492 1.00 0.00 ATOM 552 CA ILE 37 0.522 38.917 6.716 1.00 0.00 ATOM 554 CB ILE 37 0.689 37.441 6.518 1.00 0.00 ATOM 556 CG2 ILE 37 0.700 37.085 5.060 1.00 0.00 ATOM 560 CG1 ILE 37 1.914 37.052 7.149 1.00 0.00 ATOM 563 CD1 ILE 37 1.874 37.121 8.671 1.00 0.00 ATOM 567 C ILE 37 1.576 39.618 5.907 1.00 0.00 ATOM 568 O ILE 37 2.706 39.737 6.363 1.00 0.00 ATOM 569 N SER 38 1.218 40.156 4.730 1.00 0.00 ATOM 571 CA SER 38 2.223 40.813 3.912 1.00 0.00 ATOM 573 CB SER 38 1.625 41.280 2.602 1.00 0.00 ATOM 576 OG SER 38 0.735 42.343 2.795 1.00 0.00 ATOM 578 C SER 38 2.864 41.991 4.645 1.00 0.00 ATOM 579 O SER 38 3.978 42.393 4.307 1.00 0.00 ATOM 580 N SER 39 2.171 42.543 5.655 1.00 0.00 ATOM 582 CA SER 39 2.762 43.610 6.442 1.00 0.00 ATOM 584 CB SER 39 1.928 44.877 6.343 1.00 0.00 ATOM 587 OG SER 39 0.642 44.701 6.886 1.00 0.00 ATOM 589 C SER 39 2.888 43.176 7.901 1.00 0.00 ATOM 590 O SER 39 3.834 43.556 8.588 1.00 0.00 ATOM 591 N PHE 40 1.986 42.298 8.358 1.00 0.00 ATOM 593 CA PHE 40 1.960 41.856 9.756 1.00 0.00 ATOM 595 CB PHE 40 0.717 40.994 10.022 1.00 0.00 ATOM 598 CG PHE 40 0.399 40.591 11.443 1.00 0.00 ATOM 599 CD1 PHE 40 -0.158 41.505 12.331 1.00 0.00 ATOM 601 CE1 PHE 40 -0.503 41.124 13.615 1.00 0.00 ATOM 603 CZ PHE 40 -0.305 39.819 14.021 1.00 0.00 ATOM 605 CE2 PHE 40 0.238 38.902 13.151 1.00 0.00 ATOM 607 CD2 PHE 40 0.587 39.283 11.874 1.00 0.00 ATOM 609 C PHE 40 3.284 41.155 10.101 1.00 0.00 ATOM 610 O PHE 40 3.849 41.376 11.173 1.00 0.00 ATOM 611 N ILE 41 3.792 40.325 9.179 1.00 0.00 ATOM 613 CA ILE 41 5.034 39.582 9.386 1.00 0.00 ATOM 615 CB ILE 41 5.345 38.683 8.162 1.00 0.00 ATOM 617 CG2 ILE 41 5.829 39.509 6.956 1.00 0.00 ATOM 621 CG1 ILE 41 6.383 37.642 8.539 1.00 0.00 ATOM 624 CD1 ILE 41 5.876 36.662 9.563 1.00 0.00 ATOM 628 C ILE 41 6.253 40.483 9.642 1.00 0.00 ATOM 629 O ILE 41 7.256 40.016 10.184 1.00 0.00 ATOM 630 N GLY 42 6.207 41.748 9.202 1.00 0.00 ATOM 632 CA GLY 42 7.320 42.671 9.382 1.00 0.00 ATOM 635 C GLY 42 7.179 43.561 10.617 1.00 0.00 ATOM 636 O GLY 42 7.987 44.471 10.821 1.00 0.00 ATOM 637 N ARG 43 6.155 43.329 11.432 1.00 0.00 ATOM 639 CA ARG 43 5.927 44.195 12.581 1.00 0.00 ATOM 641 CB ARG 43 4.463 44.190 12.969 1.00 0.00 ATOM 644 CG ARG 43 3.505 44.648 11.876 1.00 0.00 ATOM 647 CD ARG 43 3.647 46.080 11.514 1.00 0.00 ATOM 650 NE ARG 43 2.580 46.505 10.613 1.00 0.00 ATOM 652 CZ ARG 43 2.366 47.773 10.200 1.00 0.00 ATOM 653 NH1 ARG 43 3.131 48.756 10.599 1.00 0.00 ATOM 656 NH2 ARG 43 1.373 48.060 9.388 1.00 0.00 ATOM 659 C ARG 43 6.756 43.796 13.798 1.00 0.00 ATOM 660 O ARG 43 7.086 42.625 13.998 1.00 0.00 ATOM 661 N SER 44 7.068 44.790 14.623 1.00 0.00 ATOM 663 CA SER 44 7.743 44.596 15.901 1.00 0.00 ATOM 665 CB SER 44 8.370 45.884 16.382 1.00 0.00 ATOM 668 OG SER 44 7.368 46.780 16.729 1.00 0.00 ATOM 670 C SER 44 6.728 44.133 16.935 1.00 0.00 ATOM 671 O SER 44 5.526 44.148 16.674 1.00 0.00 ATOM 672 N LYS 45 7.204 43.754 18.119 1.00 0.00 ATOM 674 CA LYS 45 6.319 43.336 19.209 1.00 0.00 ATOM 676 CB LYS 45 7.157 42.862 20.397 1.00 0.00 ATOM 679 CG LYS 45 7.902 41.547 20.144 1.00 0.00 ATOM 682 CD LYS 45 8.746 41.125 21.345 1.00 0.00 ATOM 685 CE LYS 45 9.499 39.826 21.061 1.00 0.00 ATOM 688 NZ LYS 45 10.363 39.421 22.203 1.00 0.00 ATOM 692 C LYS 45 5.361 44.463 19.647 1.00 0.00 ATOM 693 O LYS 45 4.277 44.194 20.174 1.00 0.00 TER END