####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS426_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS426_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.84 8.09 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.84 9.04 LCS_AVERAGE: 35.28 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.96 8.11 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 0 3 3 7 7 7 11 11 13 15 19 19 20 24 24 28 29 37 37 38 LCS_GDT V 3 V 3 3 7 38 0 3 4 7 8 11 13 14 20 21 27 29 30 35 36 36 38 38 38 38 LCS_GDT Q 4 Q 4 5 7 38 2 4 5 7 8 11 14 21 23 26 27 31 34 35 36 36 38 38 38 38 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT P 6 P 6 5 15 38 3 4 5 5 10 13 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT W 7 W 7 12 18 38 4 11 12 13 15 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT V 8 V 8 12 18 38 6 11 12 13 15 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT G 9 G 9 12 18 38 7 11 12 13 15 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT S 10 S 10 12 18 38 7 11 12 13 15 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT S 11 S 11 12 18 38 7 11 12 13 15 18 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT Y 12 Y 12 12 18 38 7 11 12 14 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT V 13 V 13 12 18 38 7 11 12 14 15 18 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT A 14 A 14 12 18 38 7 11 12 14 15 18 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT E 15 E 15 12 18 38 5 11 12 13 17 18 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT T 16 T 16 12 18 38 7 11 12 13 15 18 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT G 17 G 17 12 18 38 7 11 12 13 15 17 20 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT Q 18 Q 18 12 18 38 3 3 12 13 15 17 19 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT E 27 E 27 13 19 38 7 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT L 28 L 28 13 19 38 7 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT V 30 V 30 13 19 38 6 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT T 31 T 31 13 19 38 3 7 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT E 32 E 32 6 19 38 3 6 6 6 13 18 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT R 33 R 33 6 19 38 3 7 11 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 LCS_GDT P 34 P 34 6 19 38 3 6 9 14 17 19 20 24 26 28 29 33 34 35 36 36 38 38 38 38 LCS_GDT F 35 F 35 6 19 38 3 6 11 15 17 19 22 24 26 28 31 33 34 35 36 36 38 38 38 38 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 19 20 24 26 27 29 33 34 35 36 36 38 38 38 38 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 17 19 22 24 26 27 31 33 34 35 36 36 38 38 38 38 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 15 20 23 24 27 29 29 30 34 36 36 38 38 38 38 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 13 17 21 23 27 29 29 30 30 32 36 38 38 38 38 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 13 15 19 23 26 29 29 30 30 31 34 38 38 38 38 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 13 14 18 20 24 27 28 30 30 31 31 32 33 34 37 LCS_GDT G 42 G 42 4 9 34 3 4 4 7 9 9 12 13 16 18 21 24 27 28 31 31 32 33 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 5 7 9 9 12 13 16 18 20 21 24 27 30 31 32 33 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 5 9 9 12 13 15 15 19 21 24 24 27 29 32 33 33 33 LCS_GDT K 45 K 45 3 3 15 0 3 3 3 3 7 7 8 11 12 12 14 18 19 21 22 22 26 27 27 LCS_AVERAGE LCS_A: 46.83 ( 20.87 35.28 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 19 22 24 26 29 31 33 34 35 36 36 38 38 38 38 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 43.18 50.00 54.55 59.09 65.91 70.45 75.00 77.27 79.55 81.82 81.82 86.36 86.36 86.36 86.36 GDT RMS_LOCAL 0.30 0.57 0.57 1.32 1.47 1.73 2.37 2.58 2.82 3.42 3.65 3.82 3.98 4.15 4.37 4.37 4.84 4.84 4.84 4.84 GDT RMS_ALL_AT 7.99 7.96 7.96 8.87 9.26 8.98 7.96 8.18 8.18 8.72 8.50 8.49 8.51 8.48 8.32 8.32 8.09 8.09 8.09 8.09 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.746 0 0.588 0.580 17.366 0.000 0.000 - LGA V 3 V 3 10.876 0 0.118 1.040 12.126 0.000 0.000 8.378 LGA Q 4 Q 4 11.934 0 0.684 0.610 15.102 0.000 0.000 14.511 LGA G 5 G 5 10.509 0 0.111 0.111 11.106 0.000 0.000 - LGA P 6 P 6 9.159 0 0.051 0.129 11.846 0.000 0.000 10.862 LGA W 7 W 7 10.206 0 0.475 1.339 19.433 0.000 0.000 19.433 LGA V 8 V 8 8.748 0 0.084 0.084 10.158 0.000 0.000 8.630 LGA G 9 G 9 7.919 0 0.107 0.107 8.611 0.000 0.000 - LGA S 10 S 10 7.763 0 0.078 0.117 9.660 0.000 0.000 9.660 LGA S 11 S 11 4.828 0 0.031 0.649 6.097 12.727 8.788 4.755 LGA Y 12 Y 12 2.833 0 0.072 1.118 7.866 35.455 13.939 7.866 LGA V 13 V 13 3.557 0 0.043 0.982 7.715 11.364 8.052 7.715 LGA A 14 A 14 4.269 0 0.040 0.040 4.873 7.273 6.909 - LGA E 15 E 15 2.959 0 0.072 1.145 5.090 19.091 17.778 3.212 LGA T 16 T 16 3.976 0 0.132 1.182 5.895 7.727 13.247 2.169 LGA G 17 G 17 6.126 0 0.726 0.726 6.126 0.455 0.455 - LGA Q 18 Q 18 5.424 0 0.040 0.996 13.707 13.636 6.061 10.661 LGA N 19 N 19 1.656 0 0.659 1.142 7.703 51.364 26.364 5.288 LGA W 20 W 20 1.435 0 0.123 1.126 7.072 65.455 40.779 6.191 LGA A 21 A 21 2.375 0 0.046 0.041 3.048 38.182 34.182 - LGA S 22 S 22 2.203 0 0.050 0.648 2.522 44.545 40.606 2.522 LGA L 23 L 23 0.949 0 0.032 0.105 2.156 77.727 70.227 1.477 LGA A 24 A 24 1.479 0 0.010 0.016 1.880 58.182 56.727 - LGA A 25 A 25 2.193 0 0.037 0.035 2.486 44.545 43.273 - LGA N 26 N 26 1.438 0 0.043 0.263 2.566 61.818 57.045 2.566 LGA E 27 E 27 1.101 0 0.073 0.788 2.456 65.455 59.394 2.456 LGA L 28 L 28 1.055 0 0.085 0.120 1.456 65.455 65.455 1.456 LGA R 29 R 29 1.200 0 0.189 1.737 8.096 65.455 41.322 8.096 LGA V 30 V 30 1.452 0 0.150 0.193 2.019 58.182 55.325 1.410 LGA T 31 T 31 1.318 0 0.716 0.642 4.267 52.273 34.805 3.837 LGA E 32 E 32 3.620 0 0.606 1.345 10.708 28.636 12.727 10.708 LGA R 33 R 33 2.254 0 0.064 0.987 7.452 25.000 10.579 6.599 LGA P 34 P 34 3.885 0 0.241 0.704 5.560 12.727 7.792 5.560 LGA F 35 F 35 2.533 0 0.050 1.297 3.558 35.455 29.091 3.233 LGA W 36 W 36 3.762 0 0.655 1.271 14.454 14.545 4.156 14.305 LGA I 37 I 37 3.091 0 0.086 1.014 5.734 11.818 12.727 3.404 LGA S 38 S 38 6.790 0 0.117 0.131 8.997 0.000 0.000 5.867 LGA S 39 S 39 7.386 0 0.169 0.202 10.515 0.000 0.000 6.034 LGA F 40 F 40 7.888 0 0.080 1.059 11.141 0.000 0.000 9.553 LGA I 41 I 41 11.855 0 0.582 0.569 15.251 0.000 0.000 11.998 LGA G 42 G 42 16.633 0 0.190 0.190 19.280 0.000 0.000 - LGA R 43 R 43 16.531 0 0.621 1.085 17.175 0.000 0.000 15.611 LGA S 44 S 44 18.522 0 0.720 0.809 21.543 0.000 0.000 17.168 LGA K 45 K 45 22.218 0 0.171 0.401 25.040 0.000 0.000 20.601 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.605 7.782 8.475 22.376 17.677 11.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.58 49.432 47.436 0.896 LGA_LOCAL RMSD: 2.580 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.184 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.605 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.537847 * X + -0.678250 * Y + 0.500697 * Z + 0.619288 Y_new = -0.842998 * X + -0.426547 * Y + 0.327738 * Z + 26.541414 Z_new = -0.008718 * X + -0.598360 * Y + -0.801180 * Z + -14.502035 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.002891 0.008718 -2.500112 [DEG: -57.4614 0.4995 -143.2459 ] ZXZ: 2.150373 2.500061 -3.127025 [DEG: 123.2073 143.2430 -179.1653 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS426_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS426_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.58 47.436 7.60 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS426_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 11 N ALA 2 -2.239 45.728 12.247 1.00 0.00 ATOM 12 CA ALA 2 -2.597 44.943 13.477 1.00 0.00 ATOM 13 C ALA 2 -1.361 44.717 14.204 1.00 0.00 ATOM 14 O ALA 2 -1.330 44.853 15.425 1.00 0.00 ATOM 15 CB ALA 2 -3.264 43.613 13.143 1.00 0.00 ATOM 17 N VAL 3 -0.320 44.366 13.380 1.00 0.00 ATOM 18 CA VAL 3 1.033 43.928 13.683 1.00 0.00 ATOM 19 C VAL 3 2.193 45.011 13.814 1.00 0.00 ATOM 20 O VAL 3 2.039 46.138 13.349 1.00 0.00 ATOM 21 CB VAL 3 1.400 42.886 12.604 1.00 0.00 ATOM 22 CG1 VAL 3 0.439 41.699 12.659 1.00 0.00 ATOM 23 CG2 VAL 3 1.318 43.511 11.212 1.00 0.00 ATOM 25 N GLN 4 3.293 44.624 14.426 1.00 0.00 ATOM 26 CA GLN 4 4.560 45.400 14.502 1.00 0.00 ATOM 27 C GLN 4 5.215 45.611 13.228 1.00 0.00 ATOM 28 O GLN 4 6.004 46.544 13.088 1.00 0.00 ATOM 29 CB GLN 4 5.509 44.684 15.468 1.00 0.00 ATOM 30 CG GLN 4 4.944 44.651 16.889 1.00 0.00 ATOM 31 CD GLN 4 5.804 43.782 17.799 1.00 0.00 ATOM 32 NE2 GLN 4 6.162 44.277 18.966 1.00 0.00 ATOM 33 OE1 GLN 4 6.148 42.660 17.456 1.00 0.00 ATOM 35 N GLY 5 4.908 44.732 12.189 1.00 0.00 ATOM 36 CA GLY 5 4.967 45.332 10.845 1.00 0.00 ATOM 37 C GLY 5 4.695 44.240 9.922 1.00 0.00 ATOM 38 O GLY 5 4.255 43.172 10.343 1.00 0.00 ATOM 39 N PRO 6 4.914 44.346 8.577 1.00 0.00 ATOM 40 CA PRO 6 4.667 43.054 7.798 1.00 0.00 ATOM 41 C PRO 6 5.723 41.971 8.161 1.00 0.00 ATOM 42 O PRO 6 5.517 40.792 7.883 1.00 0.00 ATOM 43 CB PRO 6 4.784 43.472 6.331 1.00 0.00 ATOM 44 CG PRO 6 5.736 44.649 6.324 1.00 0.00 ATOM 45 CD PRO 6 5.329 45.536 7.487 1.00 0.00 ATOM 47 N TRP 7 6.781 42.409 8.759 1.00 0.00 ATOM 48 CA TRP 7 7.922 41.596 9.234 1.00 0.00 ATOM 49 C TRP 7 7.402 40.603 10.272 1.00 0.00 ATOM 50 O TRP 7 7.791 39.438 10.261 1.00 0.00 ATOM 51 CB TRP 7 9.028 42.462 9.843 1.00 0.00 ATOM 52 CG TRP 7 10.186 41.636 10.329 1.00 0.00 ATOM 53 CD1 TRP 7 11.271 41.277 9.598 1.00 0.00 ATOM 54 CD2 TRP 7 10.374 41.071 11.637 1.00 0.00 ATOM 55 NE1 TRP 7 12.117 40.524 10.378 1.00 0.00 ATOM 56 CE2 TRP 7 11.597 40.376 11.644 1.00 0.00 ATOM 57 CE3 TRP 7 9.605 41.097 12.807 1.00 0.00 ATOM 58 CZ2 TRP 7 12.061 39.715 12.778 1.00 0.00 ATOM 59 CZ3 TRP 7 10.070 40.436 13.943 1.00 0.00 ATOM 60 CH2 TRP 7 11.287 39.750 13.929 1.00 0.00 ATOM 62 N VAL 8 6.487 41.059 11.205 1.00 0.00 ATOM 63 CA VAL 8 5.909 40.180 12.219 1.00 0.00 ATOM 64 C VAL 8 5.140 39.089 11.579 1.00 0.00 ATOM 65 O VAL 8 5.263 37.932 11.977 1.00 0.00 ATOM 66 CB VAL 8 5.003 40.970 13.189 1.00 0.00 ATOM 67 CG1 VAL 8 4.247 40.016 14.113 1.00 0.00 ATOM 68 CG2 VAL 8 5.841 41.915 14.049 1.00 0.00 ATOM 70 N GLY 9 4.380 39.510 10.605 1.00 0.00 ATOM 71 CA GLY 9 3.622 38.477 9.913 1.00 0.00 ATOM 72 C GLY 9 4.402 37.488 9.191 1.00 0.00 ATOM 73 O GLY 9 4.110 36.296 9.267 1.00 0.00 ATOM 75 N SER 10 5.466 37.970 8.442 1.00 0.00 ATOM 76 CA SER 10 6.294 37.159 7.658 1.00 0.00 ATOM 77 C SER 10 7.061 36.196 8.551 1.00 0.00 ATOM 78 O SER 10 7.247 35.036 8.190 1.00 0.00 ATOM 79 CB SER 10 7.274 38.001 6.837 1.00 0.00 ATOM 80 OG SER 10 8.117 38.746 7.703 1.00 0.00 ATOM 82 N SER 11 7.512 36.601 9.696 1.00 0.00 ATOM 83 CA SER 11 8.186 35.702 10.621 1.00 0.00 ATOM 84 C SER 11 7.366 34.585 11.138 1.00 0.00 ATOM 85 O SER 11 7.839 33.454 11.206 1.00 0.00 ATOM 86 CB SER 11 8.717 36.538 11.787 1.00 0.00 ATOM 87 OG SER 11 9.725 37.428 11.328 1.00 0.00 ATOM 89 N TYR 12 6.211 34.957 11.457 1.00 0.00 ATOM 90 CA TYR 12 5.304 33.951 12.000 1.00 0.00 ATOM 91 C TYR 12 4.998 32.878 10.982 1.00 0.00 ATOM 92 O TYR 12 5.033 31.693 11.305 1.00 0.00 ATOM 93 CB TYR 12 4.004 34.611 12.471 1.00 0.00 ATOM 94 CG TYR 12 3.021 33.604 13.034 1.00 0.00 ATOM 95 CD1 TYR 12 3.164 33.129 14.340 1.00 0.00 ATOM 96 CD2 TYR 12 1.963 33.141 12.253 1.00 0.00 ATOM 97 CE1 TYR 12 2.259 32.202 14.857 1.00 0.00 ATOM 98 CE2 TYR 12 1.055 32.213 12.768 1.00 0.00 ATOM 99 CZ TYR 12 1.207 31.747 14.070 1.00 0.00 ATOM 100 OH TYR 12 0.315 30.833 14.578 1.00 0.00 ATOM 102 N VAL 13 4.695 33.257 9.713 1.00 0.00 ATOM 103 CA VAL 13 4.333 32.337 8.670 1.00 0.00 ATOM 104 C VAL 13 5.613 31.450 8.328 1.00 0.00 ATOM 105 O VAL 13 5.489 30.248 8.102 1.00 0.00 ATOM 106 CB VAL 13 3.831 33.057 7.398 1.00 0.00 ATOM 107 CG1 VAL 13 4.984 33.776 6.700 1.00 0.00 ATOM 108 CG2 VAL 13 3.226 32.051 6.420 1.00 0.00 ATOM 110 N ALA 14 6.781 32.143 8.326 1.00 0.00 ATOM 111 CA ALA 14 7.973 31.388 8.008 1.00 0.00 ATOM 112 C ALA 14 8.247 30.272 8.892 1.00 0.00 ATOM 113 O ALA 14 8.661 29.209 8.434 1.00 0.00 ATOM 114 CB ALA 14 9.151 32.354 7.995 1.00 0.00 ATOM 116 N GLU 15 8.010 30.496 10.207 1.00 0.00 ATOM 117 CA GLU 15 8.182 29.353 11.152 1.00 0.00 ATOM 118 C GLU 15 6.947 28.503 11.418 1.00 0.00 ATOM 119 O GLU 15 7.070 27.323 11.739 1.00 0.00 ATOM 120 CB GLU 15 8.724 29.920 12.466 1.00 0.00 ATOM 121 CG GLU 15 10.130 30.495 12.291 1.00 0.00 ATOM 122 CD GLU 15 10.655 31.068 13.603 1.00 0.00 ATOM 123 OE1 GLU 15 11.802 31.522 13.622 1.00 0.00 ATOM 124 OE2 GLU 15 9.901 31.048 14.583 1.00 0.00 ATOM 126 N THR 16 5.722 29.167 11.260 1.00 0.00 ATOM 127 CA THR 16 4.455 28.431 11.525 1.00 0.00 ATOM 128 C THR 16 3.886 27.575 10.457 1.00 0.00 ATOM 129 O THR 16 3.435 26.466 10.732 1.00 0.00 ATOM 130 CB THR 16 3.417 29.487 11.950 1.00 0.00 ATOM 131 OG1 THR 16 3.874 30.143 13.126 1.00 0.00 ATOM 132 CG2 THR 16 2.061 28.848 12.242 1.00 0.00 ATOM 134 N GLY 17 3.889 28.059 9.160 1.00 0.00 ATOM 135 CA GLY 17 3.195 27.399 8.063 1.00 0.00 ATOM 136 C GLY 17 1.735 27.824 8.166 1.00 0.00 ATOM 137 O GLY 17 1.421 28.793 8.853 1.00 0.00 ATOM 139 N GLN 18 0.847 27.152 7.530 1.00 0.00 ATOM 140 CA GLN 18 -0.592 27.575 7.377 1.00 0.00 ATOM 141 C GLN 18 -1.257 27.719 8.732 1.00 0.00 ATOM 142 O GLN 18 -1.159 26.820 9.565 1.00 0.00 ATOM 143 CB GLN 18 -1.359 26.565 6.520 1.00 0.00 ATOM 144 CG GLN 18 -0.887 26.590 5.065 1.00 0.00 ATOM 145 CD GLN 18 -1.680 25.602 4.216 1.00 0.00 ATOM 146 NE2 GLN 18 -2.090 26.000 3.030 1.00 0.00 ATOM 147 OE1 GLN 18 -1.925 24.476 4.624 1.00 0.00 ATOM 149 N ASN 19 -1.876 28.833 8.824 1.00 0.00 ATOM 150 CA ASN 19 -2.589 29.084 10.049 1.00 0.00 ATOM 151 C ASN 19 -3.772 29.836 9.797 1.00 0.00 ATOM 152 O ASN 19 -3.872 30.501 8.767 1.00 0.00 ATOM 153 CB ASN 19 -1.699 29.823 11.055 1.00 0.00 ATOM 154 CG ASN 19 -2.237 29.682 12.475 1.00 0.00 ATOM 155 ND2 ASN 19 -1.996 30.662 13.321 1.00 0.00 ATOM 156 OD1 ASN 19 -2.870 28.691 12.815 1.00 0.00 ATOM 158 N TRP 20 -4.816 29.830 10.710 1.00 0.00 ATOM 159 CA TRP 20 -5.911 30.759 10.612 1.00 0.00 ATOM 160 C TRP 20 -5.397 32.080 11.004 1.00 0.00 ATOM 161 O TRP 20 -4.453 32.166 11.787 1.00 0.00 ATOM 162 CB TRP 20 -7.092 30.370 11.506 1.00 0.00 ATOM 163 CG TRP 20 -7.864 29.210 10.943 1.00 0.00 ATOM 164 CD1 TRP 20 -8.772 29.270 9.938 1.00 0.00 ATOM 165 CD2 TRP 20 -7.797 27.832 11.347 1.00 0.00 ATOM 166 NE1 TRP 20 -9.271 28.011 9.697 1.00 0.00 ATOM 167 CE2 TRP 20 -8.692 27.096 10.548 1.00 0.00 ATOM 168 CE3 TRP 20 -7.053 27.158 12.322 1.00 0.00 ATOM 169 CZ2 TRP 20 -8.855 25.722 10.701 1.00 0.00 ATOM 170 CZ3 TRP 20 -7.215 25.783 12.475 1.00 0.00 ATOM 171 CH2 TRP 20 -8.110 25.069 11.672 1.00 0.00 ATOM 173 N ALA 21 -6.036 33.169 10.452 1.00 0.00 ATOM 174 CA ALA 21 -5.743 34.589 10.782 1.00 0.00 ATOM 175 C ALA 21 -6.007 34.787 12.254 1.00 0.00 ATOM 176 O ALA 21 -5.252 35.485 12.928 1.00 0.00 ATOM 177 CB ALA 21 -6.594 35.548 9.959 1.00 0.00 ATOM 179 N SER 22 -7.117 34.132 12.727 1.00 0.00 ATOM 180 CA SER 22 -7.340 34.324 14.176 1.00 0.00 ATOM 181 C SER 22 -6.282 33.785 15.109 1.00 0.00 ATOM 182 O SER 22 -5.898 34.459 16.061 1.00 0.00 ATOM 183 CB SER 22 -8.695 33.699 14.511 1.00 0.00 ATOM 184 OG SER 22 -9.736 34.418 13.867 1.00 0.00 ATOM 186 N LEU 23 -5.864 32.628 14.797 1.00 0.00 ATOM 187 CA LEU 23 -4.840 32.022 15.643 1.00 0.00 ATOM 188 C LEU 23 -3.552 32.841 15.604 1.00 0.00 ATOM 189 O LEU 23 -2.903 33.020 16.632 1.00 0.00 ATOM 190 CB LEU 23 -4.561 30.584 15.198 1.00 0.00 ATOM 191 CG LEU 23 -5.756 29.650 15.421 1.00 0.00 ATOM 192 CD1 LEU 23 -5.459 28.267 14.845 1.00 0.00 ATOM 193 CD2 LEU 23 -6.042 29.507 16.916 1.00 0.00 ATOM 195 N ALA 24 -3.254 33.292 14.448 1.00 0.00 ATOM 196 CA ALA 24 -2.051 34.108 14.304 1.00 0.00 ATOM 197 C ALA 24 -2.156 35.397 15.118 1.00 0.00 ATOM 198 O ALA 24 -1.184 35.810 15.745 1.00 0.00 ATOM 199 CB ALA 24 -1.812 34.430 12.834 1.00 0.00 ATOM 201 N ALA 25 -3.353 36.056 15.127 1.00 0.00 ATOM 202 CA ALA 25 -3.570 37.268 15.916 1.00 0.00 ATOM 203 C ALA 25 -3.348 36.869 17.398 1.00 0.00 ATOM 204 O ALA 25 -2.664 37.579 18.132 1.00 0.00 ATOM 205 CB ALA 25 -4.967 37.846 15.728 1.00 0.00 ATOM 207 N ASN 26 -3.920 35.747 17.805 1.00 0.00 ATOM 208 CA ASN 26 -3.708 35.439 19.171 1.00 0.00 ATOM 209 C ASN 26 -2.321 35.115 19.523 1.00 0.00 ATOM 210 O ASN 26 -1.811 35.604 20.529 1.00 0.00 ATOM 211 CB ASN 26 -4.634 34.283 19.558 1.00 0.00 ATOM 212 CG ASN 26 -6.093 34.725 19.575 1.00 0.00 ATOM 213 ND2 ASN 26 -6.979 33.939 18.998 1.00 0.00 ATOM 214 OD1 ASN 26 -6.427 35.774 20.108 1.00 0.00 ATOM 216 N GLU 27 -1.756 34.308 18.682 1.00 0.00 ATOM 217 CA GLU 27 -0.365 33.875 19.126 1.00 0.00 ATOM 218 C GLU 27 0.625 35.110 19.082 1.00 0.00 ATOM 219 O GLU 27 1.475 35.250 19.959 1.00 0.00 ATOM 220 CB GLU 27 0.166 32.744 18.241 1.00 0.00 ATOM 221 CG GLU 27 -0.603 31.443 18.474 1.00 0.00 ATOM 222 CD GLU 27 0.019 30.293 17.689 1.00 0.00 ATOM 223 OE1 GLU 27 1.134 30.465 17.191 1.00 0.00 ATOM 224 OE2 GLU 27 -0.628 29.244 17.593 1.00 0.00 ATOM 226 N LEU 28 0.510 35.970 18.103 1.00 0.00 ATOM 227 CA LEU 28 1.404 37.092 17.972 1.00 0.00 ATOM 228 C LEU 28 1.115 38.234 19.042 1.00 0.00 ATOM 229 O LEU 28 1.889 39.181 19.157 1.00 0.00 ATOM 230 CB LEU 28 1.297 37.662 16.555 1.00 0.00 ATOM 231 CG LEU 28 1.815 36.695 15.485 1.00 0.00 ATOM 232 CD1 LEU 28 1.556 37.264 14.091 1.00 0.00 ATOM 233 CD2 LEU 28 3.319 36.476 15.653 1.00 0.00 ATOM 235 N ARG 29 0.082 38.161 19.783 1.00 0.00 ATOM 236 CA ARG 29 -0.353 39.092 20.856 1.00 0.00 ATOM 237 C ARG 29 -0.513 40.389 20.279 1.00 0.00 ATOM 238 O ARG 29 0.174 41.329 20.674 1.00 0.00 ATOM 239 CB ARG 29 0.657 39.150 22.006 1.00 0.00 ATOM 240 CG ARG 29 0.739 37.819 22.753 1.00 0.00 ATOM 241 CD ARG 29 1.778 37.889 23.871 1.00 0.00 ATOM 242 NE ARG 29 1.331 38.838 24.911 1.00 0.00 ATOM 243 CZ ARG 29 0.578 38.464 25.931 1.00 0.00 ATOM 244 NH1 ARG 29 0.200 39.341 26.838 1.00 0.00 ATOM 245 NH2 ARG 29 0.206 37.206 26.042 1.00 0.00 ATOM 247 N VAL 30 -1.508 40.420 19.272 1.00 0.00 ATOM 248 CA VAL 30 -1.710 41.387 18.225 1.00 0.00 ATOM 249 C VAL 30 -3.226 41.632 18.008 1.00 0.00 ATOM 250 O VAL 30 -4.035 40.737 18.242 1.00 0.00 ATOM 251 CB VAL 30 -1.052 40.927 16.904 1.00 0.00 ATOM 252 CG1 VAL 30 -1.429 41.869 15.762 1.00 0.00 ATOM 253 CG2 VAL 30 0.470 40.919 17.043 1.00 0.00 ATOM 255 N THR 31 -3.665 42.787 17.567 1.00 0.00 ATOM 256 CA THR 31 -4.946 43.171 17.217 1.00 0.00 ATOM 257 C THR 31 -5.320 42.370 15.921 1.00 0.00 ATOM 258 O THR 31 -4.439 41.831 15.254 1.00 0.00 ATOM 259 CB THR 31 -5.071 44.683 16.945 1.00 0.00 ATOM 260 OG1 THR 31 -4.235 45.030 15.849 1.00 0.00 ATOM 261 CG2 THR 31 -4.648 45.503 18.163 1.00 0.00 ATOM 263 N GLU 32 -6.661 42.265 15.507 1.00 0.00 ATOM 264 CA GLU 32 -7.273 41.440 14.463 1.00 0.00 ATOM 265 C GLU 32 -7.535 42.271 13.125 1.00 0.00 ATOM 266 O GLU 32 -8.245 41.803 12.238 1.00 0.00 ATOM 267 CB GLU 32 -8.585 40.839 14.975 1.00 0.00 ATOM 268 CG GLU 32 -8.335 39.801 16.069 1.00 0.00 ATOM 269 CD GLU 32 -9.648 39.325 16.682 1.00 0.00 ATOM 270 OE1 GLU 32 -9.600 38.475 17.575 1.00 0.00 ATOM 271 OE2 GLU 32 -10.698 39.818 16.251 1.00 0.00 ATOM 273 N ARG 33 -6.965 43.504 12.962 1.00 0.00 ATOM 274 CA ARG 33 -7.594 44.693 12.339 1.00 0.00 ATOM 275 C ARG 33 -6.420 45.235 11.437 1.00 0.00 ATOM 276 O ARG 33 -5.403 45.689 11.956 1.00 0.00 ATOM 277 CB ARG 33 -8.047 45.778 13.319 1.00 0.00 ATOM 278 CG ARG 33 -9.234 45.315 14.165 1.00 0.00 ATOM 279 CD ARG 33 -10.461 45.071 13.288 1.00 0.00 ATOM 280 NE ARG 33 -11.618 44.713 14.136 1.00 0.00 ATOM 281 CZ ARG 33 -11.880 43.465 14.482 1.00 0.00 ATOM 282 NH1 ARG 33 -12.922 43.189 15.240 1.00 0.00 ATOM 283 NH2 ARG 33 -11.096 42.493 14.067 1.00 0.00 ATOM 284 N PRO 34 -6.700 45.135 10.066 1.00 0.00 ATOM 285 CA PRO 34 -5.670 44.784 8.990 1.00 0.00 ATOM 286 C PRO 34 -4.809 43.716 9.496 1.00 0.00 ATOM 287 O PRO 34 -3.928 43.971 10.313 1.00 0.00 ATOM 288 CB PRO 34 -4.877 46.071 8.754 1.00 0.00 ATOM 289 CG PRO 34 -5.861 47.197 8.980 1.00 0.00 ATOM 290 CD PRO 34 -7.140 46.799 8.266 1.00 0.00 ATOM 292 N PHE 35 -5.067 42.451 8.982 1.00 0.00 ATOM 293 CA PHE 35 -4.195 41.369 9.133 1.00 0.00 ATOM 294 C PHE 35 -2.855 41.555 8.356 1.00 0.00 ATOM 295 O PHE 35 -2.840 42.161 7.287 1.00 0.00 ATOM 296 CB PHE 35 -4.896 40.087 8.668 1.00 0.00 ATOM 297 CG PHE 35 -5.943 39.623 9.653 1.00 0.00 ATOM 298 CD1 PHE 35 -7.290 39.906 9.434 1.00 0.00 ATOM 299 CD2 PHE 35 -5.570 38.907 10.788 1.00 0.00 ATOM 300 CE1 PHE 35 -8.255 39.477 10.344 1.00 0.00 ATOM 301 CE2 PHE 35 -6.535 38.478 11.698 1.00 0.00 ATOM 302 CZ PHE 35 -7.877 38.763 11.474 1.00 0.00 ATOM 304 N TRP 36 -1.886 41.009 8.979 1.00 0.00 ATOM 305 CA TRP 36 -0.590 40.858 8.298 1.00 0.00 ATOM 306 C TRP 36 -0.676 39.937 7.110 1.00 0.00 ATOM 307 O TRP 36 0.158 40.012 6.210 1.00 0.00 ATOM 308 CB TRP 36 0.460 40.342 9.287 1.00 0.00 ATOM 309 CG TRP 36 0.040 39.049 9.927 1.00 0.00 ATOM 310 CD1 TRP 36 -0.662 38.921 11.080 1.00 0.00 ATOM 311 CD2 TRP 36 0.294 37.714 9.457 1.00 0.00 ATOM 312 NE1 TRP 36 -0.858 37.587 11.350 1.00 0.00 ATOM 313 CE2 TRP 36 -0.281 36.811 10.370 1.00 0.00 ATOM 314 CE3 TRP 36 0.963 37.208 8.336 1.00 0.00 ATOM 315 CZ2 TRP 36 -0.203 35.433 10.188 1.00 0.00 ATOM 316 CZ3 TRP 36 1.041 35.827 8.154 1.00 0.00 ATOM 317 CH2 TRP 36 0.462 34.946 9.072 1.00 0.00 ATOM 319 N ILE 37 -1.749 39.032 7.122 1.00 0.00 ATOM 320 CA ILE 37 -1.972 38.082 6.122 1.00 0.00 ATOM 321 C ILE 37 -2.231 38.743 4.785 1.00 0.00 ATOM 322 O ILE 37 -1.742 38.273 3.760 1.00 0.00 ATOM 323 CB ILE 37 -3.156 37.163 6.500 1.00 0.00 ATOM 324 CG1 ILE 37 -2.809 36.326 7.737 1.00 0.00 ATOM 325 CG2 ILE 37 -3.483 36.215 5.346 1.00 0.00 ATOM 326 CD1 ILE 37 -4.024 35.565 8.259 1.00 0.00 ATOM 328 N SER 38 -2.967 39.785 4.853 1.00 0.00 ATOM 329 CA SER 38 -3.175 40.430 3.590 1.00 0.00 ATOM 330 C SER 38 -1.887 40.947 2.951 1.00 0.00 ATOM 331 O SER 38 -1.681 40.774 1.751 1.00 0.00 ATOM 332 CB SER 38 -4.163 41.583 3.774 1.00 0.00 ATOM 333 OG SER 38 -3.560 42.626 4.527 1.00 0.00 ATOM 335 N SER 39 -1.049 41.560 3.759 1.00 0.00 ATOM 336 CA SER 39 0.214 42.086 3.252 1.00 0.00 ATOM 337 C SER 39 1.127 40.967 2.826 1.00 0.00 ATOM 338 O SER 39 1.770 41.058 1.784 1.00 0.00 ATOM 339 CB SER 39 0.904 42.944 4.313 1.00 0.00 ATOM 340 OG SER 39 1.260 42.143 5.430 1.00 0.00 ATOM 342 N PHE 40 1.218 39.850 3.616 1.00 0.00 ATOM 343 CA PHE 40 2.045 38.736 3.306 1.00 0.00 ATOM 344 C PHE 40 1.648 38.083 1.985 1.00 0.00 ATOM 345 O PHE 40 2.512 37.763 1.172 1.00 0.00 ATOM 346 CB PHE 40 1.979 37.709 4.439 1.00 0.00 ATOM 347 CG PHE 40 2.835 36.495 4.156 1.00 0.00 ATOM 348 CD1 PHE 40 4.209 36.536 4.380 1.00 0.00 ATOM 349 CD2 PHE 40 2.255 35.326 3.670 1.00 0.00 ATOM 350 CE1 PHE 40 4.998 35.417 4.118 1.00 0.00 ATOM 351 CE2 PHE 40 3.043 34.206 3.408 1.00 0.00 ATOM 352 CZ PHE 40 4.413 34.252 3.632 1.00 0.00 ATOM 354 N ILE 41 0.398 37.929 1.838 1.00 0.00 ATOM 355 CA ILE 41 -0.069 37.299 0.640 1.00 0.00 ATOM 356 C ILE 41 0.236 38.113 -0.561 1.00 0.00 ATOM 357 O ILE 41 0.719 37.584 -1.559 1.00 0.00 ATOM 358 CB ILE 41 -1.589 37.033 0.729 1.00 0.00 ATOM 359 CG1 ILE 41 -1.884 35.971 1.795 1.00 0.00 ATOM 360 CG2 ILE 41 -2.122 36.534 -0.616 1.00 0.00 ATOM 361 CD1 ILE 41 -3.379 35.854 2.073 1.00 0.00 ATOM 363 N GLY 42 -0.039 39.471 -0.491 1.00 0.00 ATOM 364 CA GLY 42 0.270 40.300 -1.597 1.00 0.00 ATOM 365 C GLY 42 1.741 40.214 -1.941 1.00 0.00 ATOM 366 O GLY 42 2.096 40.178 -3.118 1.00 0.00 ATOM 368 N ARG 43 2.629 40.168 -1.031 1.00 0.00 ATOM 369 CA ARG 43 4.063 39.940 -1.284 1.00 0.00 ATOM 370 C ARG 43 4.578 38.543 -1.743 1.00 0.00 ATOM 371 O ARG 43 5.414 38.459 -2.640 1.00 0.00 ATOM 372 CB ARG 43 4.762 40.357 0.012 1.00 0.00 ATOM 373 CG ARG 43 4.632 41.860 0.263 1.00 0.00 ATOM 374 CD ARG 43 5.327 42.252 1.567 1.00 0.00 ATOM 375 NE ARG 43 5.199 43.709 1.783 1.00 0.00 ATOM 376 CZ ARG 43 5.821 44.334 2.766 1.00 0.00 ATOM 377 NH1 ARG 43 5.680 45.635 2.924 1.00 0.00 ATOM 378 NH2 ARG 43 6.586 43.654 3.594 1.00 0.00 ATOM 380 N SER 44 4.043 37.545 -1.101 1.00 0.00 ATOM 381 CA SER 44 4.558 36.151 -1.338 1.00 0.00 ATOM 382 C SER 44 3.663 35.142 -2.076 1.00 0.00 ATOM 383 O SER 44 4.152 34.126 -2.564 1.00 0.00 ATOM 384 CB SER 44 4.936 35.600 0.038 1.00 0.00 ATOM 385 OG SER 44 3.772 35.441 0.836 1.00 0.00 ATOM 387 N LYS 45 2.321 35.524 -2.113 1.00 0.00 ATOM 388 CA LYS 45 1.365 34.635 -2.797 1.00 0.00 ATOM 389 C LYS 45 0.410 35.211 -3.776 1.00 0.00 ATOM 390 O LYS 45 -0.402 36.061 -3.419 1.00 0.00 ATOM 391 CB LYS 45 0.604 33.909 -1.683 1.00 0.00 ATOM 392 CG LYS 45 -0.401 32.906 -2.250 1.00 0.00 ATOM 393 CD LYS 45 -1.174 32.220 -1.124 1.00 0.00 ATOM 394 CE LYS 45 -2.189 31.229 -1.693 1.00 0.00 ATOM 395 NZ LYS 45 -2.939 30.579 -0.585 1.00 0.00 TER END