####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS470_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS470_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.90 14.92 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.83 15.90 LCS_AVERAGE: 36.36 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.96 13.94 LCS_AVERAGE: 15.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.61 12.64 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.84 21.42 LONGEST_CONTINUOUS_SEGMENT: 4 11 - 14 0.89 21.15 LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.64 17.52 LONGEST_CONTINUOUS_SEGMENT: 4 21 - 24 0.86 18.21 LONGEST_CONTINUOUS_SEGMENT: 4 23 - 26 0.65 19.25 LONGEST_CONTINUOUS_SEGMENT: 4 28 - 31 0.95 15.49 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.66 14.84 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.50 14.05 LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.92 14.21 LCS_AVERAGE: 8.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 4 5 6 7 7 8 13 13 14 15 15 17 18 20 20 22 23 25 LCS_GDT V 3 V 3 4 6 10 3 4 4 5 6 8 10 10 10 11 13 15 16 16 18 20 20 22 23 25 LCS_GDT Q 4 Q 4 4 6 13 3 4 4 5 6 8 10 10 10 11 13 15 16 16 18 20 20 21 23 24 LCS_GDT G 5 G 5 4 6 13 1 4 4 5 6 7 10 10 10 11 13 15 16 16 18 20 20 21 23 24 LCS_GDT P 6 P 6 4 6 13 0 4 4 5 6 7 7 8 9 10 12 13 15 16 18 20 20 21 23 24 LCS_GDT W 7 W 7 4 6 13 0 4 4 5 6 7 7 8 9 10 12 13 15 16 18 20 20 21 23 24 LCS_GDT V 8 V 8 4 5 13 1 4 4 5 5 6 7 8 10 11 13 15 16 16 18 20 20 21 23 24 LCS_GDT G 9 G 9 4 5 13 3 4 4 5 5 5 7 8 9 10 12 13 15 16 18 20 20 21 23 24 LCS_GDT S 10 S 10 3 5 13 3 3 5 5 5 5 7 8 9 10 12 13 14 15 15 17 19 21 23 24 LCS_GDT S 11 S 11 4 4 13 3 3 5 5 5 5 6 8 9 10 11 12 13 14 15 17 19 21 23 24 LCS_GDT Y 12 Y 12 4 4 13 3 3 5 5 5 5 5 6 6 9 11 11 11 12 14 15 19 20 23 24 LCS_GDT V 13 V 13 4 4 13 3 3 4 4 4 5 7 8 9 10 12 13 14 14 16 17 19 20 23 24 LCS_GDT A 14 A 14 4 4 17 3 3 4 4 4 5 7 8 9 10 12 15 15 16 16 18 19 21 23 24 LCS_GDT E 15 E 15 3 7 17 3 3 3 4 6 6 8 8 11 13 14 15 16 17 18 19 20 21 23 25 LCS_GDT T 16 T 16 3 7 17 3 3 4 5 6 8 10 12 13 13 14 15 16 17 18 20 20 21 23 25 LCS_GDT G 17 G 17 3 7 17 3 3 4 5 6 8 10 12 13 13 14 15 16 17 18 20 20 21 23 25 LCS_GDT Q 18 Q 18 3 7 17 0 3 4 4 6 6 8 8 12 13 14 15 16 17 18 20 20 21 23 25 LCS_GDT N 19 N 19 4 7 17 3 4 4 5 6 7 9 9 12 13 14 15 16 17 18 19 20 22 23 25 LCS_GDT W 20 W 20 4 7 17 3 4 4 5 6 7 9 9 12 13 14 15 16 17 18 19 20 22 23 25 LCS_GDT A 21 A 21 4 7 17 3 4 4 5 6 7 8 9 12 13 14 15 16 17 18 19 20 22 23 25 LCS_GDT S 22 S 22 4 4 17 3 4 4 5 6 7 9 9 12 13 14 15 16 17 18 18 19 21 22 24 LCS_GDT L 23 L 23 4 5 17 3 4 4 5 6 7 7 9 11 13 14 15 16 17 18 20 20 22 23 25 LCS_GDT A 24 A 24 4 5 18 3 4 4 5 5 7 7 9 9 10 11 12 15 17 18 20 20 22 23 25 LCS_GDT A 25 A 25 4 5 18 3 4 4 5 6 7 9 9 12 13 14 15 16 17 18 20 20 22 23 25 LCS_GDT N 26 N 26 4 5 18 3 4 4 5 6 7 9 9 12 14 15 16 17 17 18 20 20 22 23 25 LCS_GDT E 27 E 27 3 11 18 3 3 5 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT L 28 L 28 4 11 18 3 4 5 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT R 29 R 29 4 11 18 3 3 4 5 6 10 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT V 30 V 30 4 11 18 3 5 6 7 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT T 31 T 31 4 11 18 4 5 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT E 32 E 32 4 11 18 4 5 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT R 33 R 33 4 11 18 1 4 4 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT P 34 P 34 4 11 18 4 5 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT F 35 F 35 4 11 18 3 4 5 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT W 36 W 36 4 11 18 3 4 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT I 37 I 37 4 11 18 4 5 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT S 38 S 38 4 9 18 1 3 6 7 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 4 9 10 11 13 15 15 16 17 17 18 20 20 22 23 25 LCS_GDT F 40 F 40 3 4 18 3 3 3 4 4 5 7 9 12 15 15 16 17 17 18 20 20 21 23 25 LCS_GDT I 41 I 41 3 5 18 3 3 3 4 6 7 7 10 12 15 15 16 17 17 18 20 20 21 23 25 LCS_GDT G 42 G 42 3 5 18 3 3 4 5 5 7 7 9 11 13 13 16 17 17 18 18 19 21 21 23 LCS_GDT R 43 R 43 3 5 17 0 3 3 4 4 7 7 7 8 10 11 13 14 15 16 17 19 21 21 22 LCS_GDT S 44 S 44 3 5 15 0 3 3 4 4 4 5 6 7 10 10 11 12 13 15 15 15 19 21 22 LCS_GDT K 45 K 45 0 5 10 0 0 3 4 4 4 5 6 7 10 10 11 12 13 14 14 15 15 16 17 LCS_AVERAGE LCS_A: 20.09 ( 8.26 15.65 36.36 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 9 11 11 12 13 15 15 16 17 17 18 20 20 22 23 25 GDT PERCENT_AT 9.09 11.36 13.64 18.18 20.45 25.00 25.00 27.27 29.55 34.09 34.09 36.36 38.64 38.64 40.91 45.45 45.45 50.00 52.27 56.82 GDT RMS_LOCAL 0.36 0.46 0.75 1.35 1.49 1.95 1.95 2.17 2.71 3.56 3.56 3.94 4.41 4.41 4.78 5.52 5.52 6.40 6.58 7.10 GDT RMS_ALL_AT 14.27 14.55 14.67 13.89 13.81 14.18 14.18 14.28 13.76 15.65 15.65 15.37 16.07 16.07 15.38 11.93 11.93 13.55 13.47 13.90 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.621 0 0.091 0.135 10.864 0.000 0.000 - LGA V 3 V 3 11.613 0 0.055 0.083 13.350 0.000 0.000 13.047 LGA Q 4 Q 4 17.603 0 0.143 0.909 20.207 0.000 0.000 18.978 LGA G 5 G 5 22.240 0 0.219 0.219 22.240 0.000 0.000 - LGA P 6 P 6 22.791 0 0.672 0.594 26.361 0.000 0.000 26.361 LGA W 7 W 7 20.596 0 0.347 0.253 22.746 0.000 0.000 22.701 LGA V 8 V 8 19.235 0 0.677 0.868 20.509 0.000 0.000 19.411 LGA G 9 G 9 20.744 0 0.522 0.522 20.979 0.000 0.000 - LGA S 10 S 10 23.903 0 0.650 0.656 27.012 0.000 0.000 27.012 LGA S 11 S 11 20.057 0 0.602 0.784 20.982 0.000 0.000 16.328 LGA Y 12 Y 12 18.601 0 0.087 1.116 20.766 0.000 0.000 20.036 LGA V 13 V 13 18.603 0 0.611 1.421 21.460 0.000 0.000 21.460 LGA A 14 A 14 17.217 0 0.594 0.563 17.267 0.000 0.000 - LGA E 15 E 15 12.850 0 0.643 1.087 14.592 0.000 0.000 14.592 LGA T 16 T 16 11.002 0 0.620 0.959 11.854 0.000 0.000 10.786 LGA G 17 G 17 13.856 0 0.656 0.656 17.206 0.000 0.000 - LGA Q 18 Q 18 15.511 0 0.481 1.082 22.492 0.000 0.000 21.905 LGA N 19 N 19 17.217 0 0.650 1.190 21.052 0.000 0.000 21.052 LGA W 20 W 20 19.517 0 0.068 1.126 29.645 0.000 0.000 29.645 LGA A 21 A 21 18.073 0 0.664 0.615 18.537 0.000 0.000 - LGA S 22 S 22 21.373 0 0.018 0.628 24.919 0.000 0.000 24.919 LGA L 23 L 23 16.334 0 0.623 1.413 18.278 0.000 0.000 18.032 LGA A 24 A 24 12.423 0 0.642 0.613 14.215 0.000 0.000 - LGA A 25 A 25 10.759 0 0.395 0.386 12.732 0.000 0.000 - LGA N 26 N 26 7.762 0 0.646 0.946 12.435 0.000 0.000 11.244 LGA E 27 E 27 2.182 0 0.661 1.343 6.365 31.818 14.747 5.545 LGA L 28 L 28 1.563 0 0.294 0.313 2.160 51.364 53.182 2.013 LGA R 29 R 29 3.640 0 0.566 1.602 12.703 16.364 5.950 11.792 LGA V 30 V 30 2.819 0 0.274 1.123 6.380 45.455 26.234 6.271 LGA T 31 T 31 1.916 0 0.278 0.267 2.751 52.273 54.026 1.265 LGA E 32 E 32 0.783 0 0.346 0.938 3.252 70.000 46.869 3.252 LGA R 33 R 33 2.326 0 0.693 1.565 5.832 26.818 25.289 4.272 LGA P 34 P 34 1.000 0 0.657 0.626 3.770 52.273 39.481 3.770 LGA F 35 F 35 2.291 0 0.045 1.350 11.791 41.364 16.033 11.791 LGA W 36 W 36 0.298 0 0.042 1.159 5.470 82.273 35.065 4.054 LGA I 37 I 37 1.694 0 0.648 1.379 5.712 59.091 30.909 5.712 LGA S 38 S 38 3.026 0 0.658 0.752 4.312 18.182 16.970 3.781 LGA S 39 S 39 7.532 0 0.694 0.578 9.362 0.000 0.000 7.801 LGA F 40 F 40 8.038 0 0.652 0.911 12.922 0.000 0.000 12.922 LGA I 41 I 41 11.151 0 0.138 1.058 14.910 0.000 0.000 14.623 LGA G 42 G 42 15.777 0 0.671 0.671 16.470 0.000 0.000 - LGA R 43 R 43 17.729 0 0.257 1.100 21.951 0.000 0.000 18.720 LGA S 44 S 44 17.546 0 0.653 0.564 21.049 0.000 0.000 16.200 LGA K 45 K 45 17.971 0 0.617 0.756 20.474 0.000 0.000 11.310 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.344 11.230 12.214 12.438 8.290 4.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.17 25.568 23.550 0.529 LGA_LOCAL RMSD: 2.169 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.283 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.344 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.120777 * X + -0.691505 * Y + 0.712203 * Z + 23.434059 Y_new = 0.936380 * X + -0.317545 * Y + -0.149524 * Z + 59.027077 Z_new = 0.329553 * X + 0.648834 * Y + 0.685864 * Z + -18.074789 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.699070 -0.335831 0.757661 [DEG: 97.3496 -19.2417 43.4108 ] ZXZ: 1.363856 0.815006 0.469961 [DEG: 78.1432 46.6964 26.9268 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS470_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS470_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.17 23.550 11.34 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS470_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 1923 N ALA 2 15.598 39.091 17.678 1.00 1.83 ATOM 1925 CA ALA 2 15.284 38.475 18.945 1.00 1.83 ATOM 1926 CB ALA 2 16.501 38.211 19.848 1.00 1.83 ATOM 1927 C ALA 2 14.339 39.381 19.681 1.00 1.83 ATOM 1928 O ALA 2 14.570 40.590 19.788 1.00 1.83 ATOM 1929 N VAL 3 13.234 38.790 20.180 1.00 1.83 ATOM 1931 CA VAL 3 12.208 39.504 20.885 1.00 1.83 ATOM 1932 CB VAL 3 10.815 39.160 20.359 1.00 1.83 ATOM 1933 CG1 VAL 3 9.715 39.919 21.124 1.00 1.83 ATOM 1934 CG2 VAL 3 10.760 39.409 18.841 1.00 1.83 ATOM 1935 C VAL 3 12.305 39.152 22.345 1.00 1.83 ATOM 1936 O VAL 3 12.200 37.982 22.728 1.00 1.83 ATOM 1937 N GLN 4 12.533 40.195 23.176 1.00 2.00 ATOM 1939 CA GLN 4 12.608 40.072 24.606 1.00 2.00 ATOM 1940 CB GLN 4 13.943 40.558 25.223 1.00 2.00 ATOM 1941 CG GLN 4 15.203 39.780 24.800 1.00 2.00 ATOM 1942 CD GLN 4 15.159 38.317 25.256 1.00 2.00 ATOM 1943 OE1 GLN 4 14.778 37.975 26.376 1.00 2.00 ATOM 1944 NE2 GLN 4 15.579 37.404 24.342 1.00 2.00 ATOM 1947 C GLN 4 11.513 41.007 25.022 1.00 2.00 ATOM 1948 O GLN 4 11.624 42.226 24.864 1.00 2.00 ATOM 1949 N GLY 5 10.406 40.435 25.536 1.00 2.25 ATOM 1951 CA GLY 5 9.252 41.190 25.944 1.00 2.25 ATOM 1952 C GLY 5 8.362 41.084 24.734 1.00 2.25 ATOM 1953 O GLY 5 8.706 41.680 23.709 1.00 2.25 ATOM 1954 N PRO 6 7.211 40.423 24.816 1.00 2.82 ATOM 1955 CA PRO 6 6.307 40.219 23.700 1.00 2.82 ATOM 1956 CB PRO 6 5.189 39.315 24.225 1.00 2.82 ATOM 1957 CG PRO 6 5.832 38.568 25.403 1.00 2.82 ATOM 1958 CD PRO 6 6.862 39.568 25.950 1.00 2.82 ATOM 1959 C PRO 6 5.773 41.446 23.016 1.00 2.82 ATOM 1960 O PRO 6 5.666 42.505 23.639 1.00 2.82 ATOM 1961 N TRP 7 5.460 41.282 21.712 1.00 3.60 ATOM 1963 CA TRP 7 5.115 42.329 20.783 1.00 3.60 ATOM 1964 CB TRP 7 4.810 41.803 19.363 1.00 3.60 ATOM 1965 CG TRP 7 5.952 41.223 18.566 1.00 3.60 ATOM 1966 CD1 TRP 7 6.204 39.921 18.236 1.00 3.60 ATOM 1967 NE1 TRP 7 7.324 39.842 17.437 1.00 3.60 ATOM 1969 CE2 TRP 7 7.810 41.115 17.240 1.00 3.60 ATOM 1970 CZ2 TRP 7 8.899 41.581 16.514 1.00 3.60 ATOM 1971 CH2 TRP 7 9.150 42.957 16.498 1.00 3.60 ATOM 1972 CZ3 TRP 7 8.319 43.845 17.193 1.00 3.60 ATOM 1973 CE3 TRP 7 7.216 43.380 17.919 1.00 3.60 ATOM 1974 CD2 TRP 7 6.976 42.009 17.936 1.00 3.60 ATOM 1975 C TRP 7 3.881 43.095 21.147 1.00 3.60 ATOM 1976 O TRP 7 2.878 42.529 21.588 1.00 3.60 ATOM 1977 N VAL 8 3.973 44.431 20.970 1.00 4.39 ATOM 1979 CA VAL 8 2.904 45.361 21.211 1.00 4.39 ATOM 1980 CB VAL 8 2.947 45.996 22.609 1.00 4.39 ATOM 1981 CG1 VAL 8 4.243 46.805 22.848 1.00 4.39 ATOM 1982 CG2 VAL 8 1.657 46.801 22.858 1.00 4.39 ATOM 1983 C VAL 8 3.014 46.399 20.116 1.00 4.39 ATOM 1984 O VAL 8 4.122 46.744 19.684 1.00 4.39 ATOM 1985 N GLY 9 1.857 46.900 19.625 1.00 5.25 ATOM 1987 CA GLY 9 1.905 47.912 18.613 1.00 5.25 ATOM 1988 C GLY 9 0.668 48.073 17.811 1.00 5.25 ATOM 1989 O GLY 9 0.085 47.113 17.302 1.00 5.25 ATOM 1990 N SER 10 0.279 49.359 17.672 1.00 5.83 ATOM 1992 CA SER 10 -0.857 49.759 16.901 1.00 5.83 ATOM 1993 CB SER 10 -1.712 50.848 17.582 1.00 5.83 ATOM 1994 OG SER 10 -2.229 50.362 18.813 1.00 5.83 ATOM 1996 C SER 10 -0.182 50.337 15.698 1.00 5.83 ATOM 1997 O SER 10 0.524 51.347 15.785 1.00 5.83 ATOM 1998 N SER 11 -0.368 49.663 14.550 1.00 6.10 ATOM 2000 CA SER 11 0.232 50.063 13.309 1.00 6.10 ATOM 2001 CB SER 11 1.515 49.251 13.005 1.00 6.10 ATOM 2002 OG SER 11 1.227 47.866 12.847 1.00 6.10 ATOM 2004 C SER 11 -0.745 49.879 12.192 1.00 6.10 ATOM 2005 O SER 11 -1.728 49.155 12.346 1.00 6.10 ATOM 2006 N TYR 12 -0.492 50.560 11.047 1.00 6.24 ATOM 2008 CA TYR 12 -1.334 50.479 9.878 1.00 6.24 ATOM 2009 CB TYR 12 -1.004 51.608 8.872 1.00 6.24 ATOM 2010 CG TYR 12 -1.940 51.609 7.706 1.00 6.24 ATOM 2011 CD1 TYR 12 -3.254 52.040 7.900 1.00 6.24 ATOM 2012 CE1 TYR 12 -4.159 52.076 6.845 1.00 6.24 ATOM 2013 CZ TYR 12 -3.749 51.690 5.574 1.00 6.24 ATOM 2014 OH TYR 12 -4.679 51.743 4.523 1.00 6.24 ATOM 2016 CE2 TYR 12 -2.437 51.266 5.351 1.00 6.24 ATOM 2017 CD2 TYR 12 -1.533 51.230 6.418 1.00 6.24 ATOM 2018 C TYR 12 -1.135 49.116 9.256 1.00 6.24 ATOM 2019 O TYR 12 -2.104 48.446 8.902 1.00 6.24 ATOM 2020 N VAL 13 0.142 48.694 9.112 1.00 6.34 ATOM 2022 CA VAL 13 0.516 47.406 8.586 1.00 6.34 ATOM 2023 CB VAL 13 1.045 47.364 7.150 1.00 6.34 ATOM 2024 CG1 VAL 13 -0.078 47.758 6.173 1.00 6.34 ATOM 2025 CG2 VAL 13 2.283 48.273 6.978 1.00 6.34 ATOM 2026 C VAL 13 1.532 46.840 9.535 1.00 6.34 ATOM 2027 O VAL 13 2.304 47.587 10.146 1.00 6.34 ATOM 2028 N ALA 14 1.520 45.502 9.715 1.00 6.71 ATOM 2030 CA ALA 14 2.463 44.882 10.602 1.00 6.71 ATOM 2031 CB ALA 14 1.854 44.381 11.924 1.00 6.71 ATOM 2032 C ALA 14 3.118 43.724 9.924 1.00 6.71 ATOM 2033 O ALA 14 2.500 42.682 9.685 1.00 6.71 ATOM 2034 N GLU 15 4.401 43.923 9.556 1.00 7.63 ATOM 2036 CA GLU 15 5.162 42.885 8.927 1.00 7.63 ATOM 2037 CB GLU 15 6.027 43.377 7.747 1.00 7.63 ATOM 2038 CG GLU 15 6.780 42.267 7.006 1.00 7.63 ATOM 2039 CD GLU 15 7.431 42.869 5.773 1.00 7.63 ATOM 2040 OE1 GLU 15 7.074 42.403 4.661 1.00 7.63 ATOM 2041 OE2 GLU 15 8.286 43.786 5.903 1.00 7.63 ATOM 2042 C GLU 15 6.002 42.328 10.034 1.00 7.63 ATOM 2043 O GLU 15 6.833 43.028 10.621 1.00 7.63 ATOM 2044 N THR 16 5.763 41.043 10.356 1.00 8.48 ATOM 2046 CA THR 16 6.480 40.388 11.405 1.00 8.48 ATOM 2047 CB THR 16 5.529 39.960 12.508 1.00 8.48 ATOM 2048 CG2 THR 16 6.320 39.348 13.672 1.00 8.48 ATOM 2049 OG1 THR 16 4.847 41.100 13.014 1.00 8.48 ATOM 2051 C THR 16 7.116 39.210 10.714 1.00 8.48 ATOM 2052 O THR 16 6.441 38.240 10.357 1.00 8.48 ATOM 2053 N GLY 17 8.450 39.286 10.513 1.00 8.69 ATOM 2055 CA GLY 17 9.170 38.230 9.855 1.00 8.69 ATOM 2056 C GLY 17 10.509 38.067 10.496 1.00 8.69 ATOM 2057 O GLY 17 11.114 39.038 10.957 1.00 8.69 ATOM 2058 N GLN 18 10.995 36.800 10.493 1.00 8.33 ATOM 2060 CA GLN 18 12.247 36.319 11.046 1.00 8.33 ATOM 2061 CB GLN 18 13.497 36.498 10.129 1.00 8.33 ATOM 2062 CG GLN 18 14.029 37.919 9.858 1.00 8.33 ATOM 2063 CD GLN 18 14.976 37.931 8.653 1.00 8.33 ATOM 2064 OE1 GLN 18 15.379 36.921 8.074 1.00 8.33 ATOM 2065 NE2 GLN 18 15.364 39.167 8.246 1.00 8.33 ATOM 2068 C GLN 18 12.475 36.738 12.483 1.00 8.33 ATOM 2069 O GLN 18 13.584 37.069 12.914 1.00 8.33 ATOM 2070 N ASN 19 11.370 36.735 13.260 1.00 7.40 ATOM 2072 CA ASN 19 11.391 37.099 14.647 1.00 7.40 ATOM 2073 CB ASN 19 10.242 38.034 15.073 1.00 7.40 ATOM 2074 CG ASN 19 10.491 39.357 14.357 1.00 7.40 ATOM 2075 OD1 ASN 19 11.476 40.051 14.611 1.00 7.40 ATOM 2076 ND2 ASN 19 9.599 39.704 13.397 1.00 7.40 ATOM 2079 C ASN 19 11.417 35.883 15.495 1.00 7.40 ATOM 2080 O ASN 19 10.698 34.915 15.238 1.00 7.40 ATOM 2081 N TRP 20 12.302 35.911 16.510 1.00 6.60 ATOM 2083 CA TRP 20 12.420 34.806 17.405 1.00 6.60 ATOM 2084 CB TRP 20 13.821 34.138 17.408 1.00 6.60 ATOM 2085 CG TRP 20 13.933 32.916 18.300 1.00 6.60 ATOM 2086 CD1 TRP 20 13.546 31.631 18.039 1.00 6.60 ATOM 2087 NE1 TRP 20 13.791 30.825 19.126 1.00 6.60 ATOM 2089 CE2 TRP 20 14.369 31.589 20.115 1.00 6.60 ATOM 2090 CZ2 TRP 20 14.809 31.258 21.390 1.00 6.60 ATOM 2091 CH2 TRP 20 15.368 32.270 22.181 1.00 6.60 ATOM 2092 CZ3 TRP 20 15.483 33.582 21.699 1.00 6.60 ATOM 2093 CE3 TRP 20 15.038 33.915 20.414 1.00 6.60 ATOM 2094 CD2 TRP 20 14.481 32.907 19.632 1.00 6.60 ATOM 2095 C TRP 20 12.077 35.287 18.773 1.00 6.60 ATOM 2096 O TRP 20 12.798 36.083 19.373 1.00 6.60 ATOM 2097 N ALA 21 10.918 34.824 19.271 1.00 6.39 ATOM 2099 CA ALA 21 10.478 35.152 20.592 1.00 6.39 ATOM 2100 CB ALA 21 8.967 35.361 20.729 1.00 6.39 ATOM 2101 C ALA 21 10.885 33.983 21.427 1.00 6.39 ATOM 2102 O ALA 21 10.736 32.829 21.012 1.00 6.39 ATOM 2103 N SER 22 11.409 34.278 22.636 1.00 6.42 ATOM 2105 CA SER 22 11.860 33.280 23.573 1.00 6.42 ATOM 2106 CB SER 22 12.471 33.937 24.823 1.00 6.42 ATOM 2107 OG SER 22 13.652 34.645 24.468 1.00 6.42 ATOM 2109 C SER 22 10.694 32.419 23.985 1.00 6.42 ATOM 2110 O SER 22 10.838 31.202 24.126 1.00 6.42 ATOM 2111 N LEU 23 9.513 33.051 24.169 1.00 6.56 ATOM 2113 CA LEU 23 8.304 32.375 24.534 1.00 6.56 ATOM 2114 CB LEU 23 7.263 33.349 25.141 1.00 6.56 ATOM 2115 CG LEU 23 5.931 32.744 25.642 1.00 6.56 ATOM 2116 CD1 LEU 23 6.130 31.806 26.846 1.00 6.56 ATOM 2117 CD2 LEU 23 4.891 33.846 25.889 1.00 6.56 ATOM 2118 C LEU 23 7.699 31.691 23.336 1.00 6.56 ATOM 2119 O LEU 23 7.500 32.293 22.277 1.00 6.56 ATOM 2120 N ALA 24 7.426 30.380 23.501 1.00 6.58 ATOM 2122 CA ALA 24 6.792 29.556 22.506 1.00 6.58 ATOM 2123 CB ALA 24 6.928 28.045 22.766 1.00 6.58 ATOM 2124 C ALA 24 5.334 29.920 22.571 1.00 6.58 ATOM 2125 O ALA 24 4.811 30.252 23.639 1.00 6.58 ATOM 2126 N ALA 25 4.649 29.828 21.414 1.00 6.45 ATOM 2128 CA ALA 25 3.261 30.177 21.231 1.00 6.45 ATOM 2129 CB ALA 25 2.258 29.312 22.038 1.00 6.45 ATOM 2130 C ALA 25 3.046 31.657 21.450 1.00 6.45 ATOM 2131 O ALA 25 2.016 32.096 21.969 1.00 6.45 ATOM 2132 N ASN 26 4.070 32.456 21.057 1.00 6.29 ATOM 2134 CA ASN 26 4.037 33.888 21.125 1.00 6.29 ATOM 2135 CB ASN 26 5.430 34.553 21.089 1.00 6.29 ATOM 2136 CG ASN 26 5.314 36.067 21.253 1.00 6.29 ATOM 2137 OD1 ASN 26 4.895 36.583 22.287 1.00 6.29 ATOM 2138 ND2 ASN 26 5.689 36.807 20.176 1.00 6.29 ATOM 2141 C ASN 26 3.291 34.300 19.895 1.00 6.29 ATOM 2142 O ASN 26 3.570 33.828 18.793 1.00 6.29 ATOM 2143 N GLU 27 2.298 35.181 20.083 1.00 6.13 ATOM 2145 CA GLU 27 1.478 35.689 19.021 1.00 6.13 ATOM 2146 CB GLU 27 0.296 36.535 19.529 1.00 6.13 ATOM 2147 CG GLU 27 -0.740 35.798 20.390 1.00 6.13 ATOM 2148 CD GLU 27 -0.399 35.769 21.886 1.00 6.13 ATOM 2149 OE1 GLU 27 0.670 36.271 22.326 1.00 6.13 ATOM 2150 OE2 GLU 27 -1.253 35.218 22.628 1.00 6.13 ATOM 2151 C GLU 27 2.275 36.621 18.159 1.00 6.13 ATOM 2152 O GLU 27 3.041 37.440 18.675 1.00 6.13 ATOM 2153 N LEU 28 2.133 36.488 16.814 1.00 6.16 ATOM 2155 CA LEU 28 2.809 37.374 15.894 1.00 6.16 ATOM 2156 CB LEU 28 2.754 36.869 14.438 1.00 6.16 ATOM 2157 CG LEU 28 3.653 35.637 14.209 1.00 6.16 ATOM 2158 CD1 LEU 28 3.394 34.971 12.856 1.00 6.16 ATOM 2159 CD2 LEU 28 5.142 35.989 14.379 1.00 6.16 ATOM 2160 C LEU 28 2.095 38.692 16.029 1.00 6.16 ATOM 2161 O LEU 28 2.734 39.731 16.203 1.00 6.16 ATOM 2162 N ARG 29 0.743 38.645 15.977 1.00 6.63 ATOM 2164 CA ARG 29 -0.107 39.790 16.169 1.00 6.63 ATOM 2165 CB ARG 29 -0.139 40.834 15.012 1.00 6.63 ATOM 2166 CG ARG 29 -0.812 42.168 15.398 1.00 6.63 ATOM 2167 CD ARG 29 -0.815 43.270 14.328 1.00 6.63 ATOM 2168 NE ARG 29 -1.464 44.483 14.928 1.00 6.63 ATOM 2170 CZ ARG 29 -1.472 45.709 14.309 1.00 6.63 ATOM 2171 NH1 ARG 29 -0.927 45.910 13.073 1.00 6.63 ATOM 2174 NH2 ARG 29 -2.039 46.783 14.934 1.00 6.63 ATOM 2177 C ARG 29 -1.491 39.223 16.374 1.00 6.63 ATOM 2178 O ARG 29 -1.857 38.204 15.780 1.00 6.63 ATOM 2179 N VAL 30 -2.257 39.862 17.286 1.00 7.16 ATOM 2181 CA VAL 30 -3.625 39.564 17.666 1.00 7.16 ATOM 2182 CB VAL 30 -3.844 38.519 18.774 1.00 7.16 ATOM 2183 CG1 VAL 30 -3.400 37.120 18.314 1.00 7.16 ATOM 2184 CG2 VAL 30 -3.120 38.961 20.065 1.00 7.16 ATOM 2185 C VAL 30 -4.308 40.865 18.033 1.00 7.16 ATOM 2186 O VAL 30 -3.718 41.940 17.900 1.00 7.16 ATOM 2187 N THR 31 -5.604 40.779 18.442 1.00 7.35 ATOM 2189 CA THR 31 -6.493 41.841 18.869 1.00 7.35 ATOM 2190 CB THR 31 -6.111 42.628 20.123 1.00 7.35 ATOM 2191 CG2 THR 31 -6.097 41.661 21.322 1.00 7.35 ATOM 2192 OG1 THR 31 -4.850 43.273 20.005 1.00 7.35 ATOM 2194 C THR 31 -6.895 42.760 17.758 1.00 7.35 ATOM 2195 O THR 31 -8.066 42.769 17.370 1.00 7.35 ATOM 2196 N GLU 32 -5.929 43.517 17.188 1.00 7.42 ATOM 2198 CA GLU 32 -6.197 44.438 16.119 1.00 7.42 ATOM 2199 CB GLU 32 -5.281 45.672 16.166 1.00 7.42 ATOM 2200 CG GLU 32 -5.492 46.523 17.423 1.00 7.42 ATOM 2201 CD GLU 32 -4.560 47.717 17.386 1.00 7.42 ATOM 2202 OE1 GLU 32 -3.319 47.504 17.364 1.00 7.42 ATOM 2203 OE2 GLU 32 -5.079 48.864 17.384 1.00 7.42 ATOM 2204 C GLU 32 -6.111 43.712 14.804 1.00 7.42 ATOM 2205 O GLU 32 -5.251 43.961 13.958 1.00 7.42 ATOM 2206 N ARG 33 -7.078 42.784 14.621 1.00 7.37 ATOM 2208 CA ARG 33 -7.230 41.952 13.458 1.00 7.37 ATOM 2209 CB ARG 33 -8.143 40.736 13.691 1.00 7.37 ATOM 2210 CG ARG 33 -7.533 39.786 14.737 1.00 7.37 ATOM 2211 CD ARG 33 -8.365 38.554 15.103 1.00 7.37 ATOM 2212 NE ARG 33 -8.207 37.532 14.028 1.00 7.37 ATOM 2214 CZ ARG 33 -9.094 36.500 13.869 1.00 7.37 ATOM 2215 NH1 ARG 33 -8.733 35.461 13.064 1.00 7.37 ATOM 2218 NH2 ARG 33 -10.318 36.479 14.479 1.00 7.37 ATOM 2221 C ARG 33 -7.561 42.674 12.166 1.00 7.37 ATOM 2222 O ARG 33 -7.202 42.092 11.138 1.00 7.37 ATOM 2223 N PRO 34 -8.259 43.832 12.068 1.00 7.42 ATOM 2224 CA PRO 34 -8.502 44.496 10.804 1.00 7.42 ATOM 2225 CB PRO 34 -9.470 45.645 11.082 1.00 7.42 ATOM 2226 CG PRO 34 -9.314 45.908 12.584 1.00 7.42 ATOM 2227 CD PRO 34 -8.975 44.520 13.144 1.00 7.42 ATOM 2228 C PRO 34 -7.259 44.976 10.106 1.00 7.42 ATOM 2229 O PRO 34 -7.326 45.167 8.892 1.00 7.42 ATOM 2230 N PHE 35 -6.145 45.207 10.841 1.00 7.75 ATOM 2232 CA PHE 35 -4.915 45.665 10.239 1.00 7.75 ATOM 2233 CB PHE 35 -3.883 46.201 11.234 1.00 7.75 ATOM 2234 CG PHE 35 -4.388 47.471 11.815 1.00 7.75 ATOM 2235 CD1 PHE 35 -4.741 47.495 13.164 1.00 7.75 ATOM 2236 CE1 PHE 35 -5.213 48.661 13.760 1.00 7.75 ATOM 2237 CZ PHE 35 -5.342 49.814 12.993 1.00 7.75 ATOM 2238 CE2 PHE 35 -5.012 49.804 11.634 1.00 7.75 ATOM 2239 CD2 PHE 35 -4.542 48.631 11.046 1.00 7.75 ATOM 2240 C PHE 35 -4.255 44.548 9.499 1.00 7.75 ATOM 2241 O PHE 35 -4.302 43.395 9.934 1.00 7.75 ATOM 2242 N TRP 36 -3.634 44.877 8.343 1.00 8.03 ATOM 2244 CA TRP 36 -2.972 43.880 7.550 1.00 8.03 ATOM 2245 CB TRP 36 -2.970 44.125 6.040 1.00 8.03 ATOM 2246 CG TRP 36 -4.351 43.755 5.560 1.00 8.03 ATOM 2247 CD1 TRP 36 -4.830 42.557 5.100 1.00 8.03 ATOM 2248 NE1 TRP 36 -6.181 42.650 4.851 1.00 8.03 ATOM 2250 CE2 TRP 36 -6.592 43.928 5.161 1.00 8.03 ATOM 2251 CZ2 TRP 36 -7.838 44.529 5.121 1.00 8.03 ATOM 2252 CH2 TRP 36 -7.946 45.872 5.497 1.00 8.03 ATOM 2253 CZ3 TRP 36 -6.824 46.584 5.927 1.00 8.03 ATOM 2254 CE3 TRP 36 -5.570 45.978 5.997 1.00 8.03 ATOM 2255 CD2 TRP 36 -5.469 44.650 5.603 1.00 8.03 ATOM 2256 C TRP 36 -1.664 43.437 8.092 1.00 8.03 ATOM 2257 O TRP 36 -0.822 44.228 8.523 1.00 8.03 ATOM 2258 N ILE 37 -1.526 42.099 8.079 1.00 8.10 ATOM 2260 CA ILE 37 -0.402 41.384 8.602 1.00 8.10 ATOM 2261 CB ILE 37 -0.890 40.341 9.627 1.00 8.10 ATOM 2262 CG2 ILE 37 0.265 39.466 10.174 1.00 8.10 ATOM 2263 CG1 ILE 37 -1.623 41.041 10.798 1.00 8.10 ATOM 2264 CD1 ILE 37 -2.370 40.092 11.743 1.00 8.10 ATOM 2265 C ILE 37 0.347 40.691 7.496 1.00 8.10 ATOM 2266 O ILE 37 -0.213 40.296 6.469 1.00 8.10 ATOM 2267 N SER 38 1.677 40.610 7.698 1.00 8.03 ATOM 2269 CA SER 38 2.569 39.924 6.816 1.00 8.03 ATOM 2270 CB SER 38 3.465 40.881 6.032 1.00 8.03 ATOM 2271 OG SER 38 2.648 41.617 5.133 1.00 8.03 ATOM 2273 C SER 38 3.372 39.019 7.721 1.00 8.03 ATOM 2274 O SER 38 4.037 39.485 8.646 1.00 8.03 ATOM 2275 N SER 39 3.258 37.686 7.508 1.00 7.93 ATOM 2277 CA SER 39 3.933 36.671 8.280 1.00 7.93 ATOM 2278 CB SER 39 3.250 36.437 9.644 1.00 7.93 ATOM 2279 OG SER 39 1.937 35.911 9.503 1.00 7.93 ATOM 2281 C SER 39 4.027 35.363 7.529 1.00 7.93 ATOM 2282 O SER 39 3.289 35.131 6.568 1.00 7.93 ATOM 2283 N PHE 40 4.978 34.489 7.951 1.00 7.79 ATOM 2285 CA PHE 40 5.191 33.197 7.345 1.00 7.79 ATOM 2286 CB PHE 40 6.146 33.285 6.116 1.00 7.79 ATOM 2287 CG PHE 40 6.430 31.967 5.456 1.00 7.79 ATOM 2288 CD1 PHE 40 5.497 31.377 4.598 1.00 7.79 ATOM 2289 CE1 PHE 40 5.767 30.155 3.977 1.00 7.79 ATOM 2290 CZ PHE 40 6.988 29.519 4.209 1.00 7.79 ATOM 2291 CE2 PHE 40 7.937 30.098 5.053 1.00 7.79 ATOM 2292 CD2 PHE 40 7.657 31.320 5.667 1.00 7.79 ATOM 2293 C PHE 40 5.773 32.249 8.361 1.00 7.79 ATOM 2294 O PHE 40 6.639 32.624 9.153 1.00 7.79 ATOM 2295 N ILE 41 5.283 30.987 8.355 1.00 7.59 ATOM 2297 CA ILE 41 5.772 29.950 9.234 1.00 7.59 ATOM 2298 CB ILE 41 5.101 29.926 10.618 1.00 7.59 ATOM 2299 CG2 ILE 41 3.593 29.657 10.497 1.00 7.59 ATOM 2300 CG1 ILE 41 5.817 28.972 11.597 1.00 7.59 ATOM 2301 CD1 ILE 41 5.400 29.146 13.055 1.00 7.59 ATOM 2302 C ILE 41 5.633 28.647 8.487 1.00 7.59 ATOM 2303 O ILE 41 4.775 28.503 7.611 1.00 7.59 ATOM 2304 N GLY 42 6.499 27.663 8.801 1.00 7.31 ATOM 2306 CA GLY 42 6.397 26.406 8.134 1.00 7.31 ATOM 2307 C GLY 42 7.016 25.329 8.932 1.00 7.31 ATOM 2308 O GLY 42 8.004 25.524 9.646 1.00 7.31 ATOM 2309 N ARG 43 6.397 24.141 8.818 1.00 7.07 ATOM 2311 CA ARG 43 6.873 22.975 9.466 1.00 7.07 ATOM 2312 CB ARG 43 5.809 22.129 10.201 1.00 7.07 ATOM 2313 CG ARG 43 5.006 22.932 11.244 1.00 7.07 ATOM 2314 CD ARG 43 5.784 23.604 12.387 1.00 7.07 ATOM 2315 NE ARG 43 6.369 22.569 13.293 1.00 7.07 ATOM 2317 CZ ARG 43 7.219 22.908 14.313 1.00 7.07 ATOM 2318 NH1 ARG 43 7.678 21.927 15.145 1.00 7.07 ATOM 2321 NH2 ARG 43 7.619 24.199 14.529 1.00 7.07 ATOM 2324 C ARG 43 7.459 22.269 8.294 1.00 7.07 ATOM 2325 O ARG 43 6.822 21.467 7.601 1.00 7.07 ATOM 2326 N SER 44 8.725 22.670 8.061 1.00 6.88 ATOM 2328 CA SER 44 9.641 22.197 7.065 1.00 6.88 ATOM 2329 CB SER 44 10.820 23.165 6.862 1.00 6.88 ATOM 2330 OG SER 44 10.341 24.411 6.373 1.00 6.88 ATOM 2332 C SER 44 10.170 20.880 7.578 1.00 6.88 ATOM 2333 O SER 44 10.759 20.108 6.822 1.00 6.88 ATOM 2334 N LYS 45 9.976 20.622 8.905 1.00 6.70 ATOM 2336 CA LYS 45 10.323 19.416 9.610 1.00 6.70 ATOM 2337 CB LYS 45 9.971 19.495 11.104 1.00 6.70 ATOM 2338 CG LYS 45 10.870 20.459 11.877 1.00 6.70 ATOM 2339 CD LYS 45 10.531 20.567 13.360 1.00 6.70 ATOM 2340 CE LYS 45 11.440 21.537 14.113 1.00 6.70 ATOM 2341 NZ LYS 45 11.023 21.620 15.524 1.00 6.70 ATOM 2345 C LYS 45 9.484 18.338 8.978 1.00 6.70 ATOM 2346 O LYS 45 9.947 17.202 8.856 1.00 6.70 TER END