#######################################################
# #
# LGA #
# --------------- #
# #
# Local-Global Alignment #
# A Method for Finding 3-D Similarities #
# in Protein Structures #
# #
# ------------ 09/2011 #
# #
# Adam Zemla (adamz@llnl.gov) #
# Lawrence Livermore National Laboratory, CA #
# #
#######################################################
# Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS488_1-D1
# Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb
# PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS488_1-D1.lga
# FIXED Atom-Atom correspondence
# GDT and LCS analysis
LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 32 13 - 44 4.90 7.85
LCS_AVERAGE: 65.60
LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 14 19 - 32 1.92 10.29
LCS_AVERAGE: 22.62
LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS
LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.84 11.33
LCS_AVERAGE: 16.22
LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44
LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0
LCS_GDT A 2 A 2 3 3 17 3 3 3 5 6 6 7 10 14 16 19 23 24 31 32 35 38 40 42 43
LCS_GDT V 3 V 3 3 7 18 3 3 4 6 7 8 8 10 11 12 15 19 21 24 27 35 37 40 42 43
LCS_GDT Q 4 Q 4 3 7 20 3 3 4 5 7 8 8 10 11 12 13 18 21 24 30 35 38 40 42 43
LCS_GDT G 5 G 5 4 7 20 2 3 4 6 7 8 9 12 14 14 15 16 19 26 31 35 37 40 42 43
LCS_GDT P 6 P 6 4 7 20 3 4 4 6 7 9 10 13 14 14 15 16 19 21 24 26 31 38 41 43
LCS_GDT W 7 W 7 4 7 20 3 4 4 6 7 8 8 13 13 14 15 16 19 21 30 32 37 40 42 43
LCS_GDT V 8 V 8 4 10 20 3 4 5 6 8 10 10 13 14 14 15 16 19 26 31 35 38 40 42 43
LCS_GDT G 9 G 9 9 10 20 9 9 9 9 9 10 10 11 12 14 15 16 19 25 31 35 38 40 42 43
LCS_GDT S 10 S 10 9 10 20 9 9 9 9 9 10 10 13 15 21 27 29 31 32 32 35 38 40 42 43
LCS_GDT S 11 S 11 9 10 20 9 9 9 9 9 10 10 13 14 14 17 19 21 27 31 35 38 40 42 43
LCS_GDT Y 12 Y 12 9 10 20 9 9 9 9 9 10 10 13 14 14 15 18 21 25 31 35 38 40 42 43
LCS_GDT V 13 V 13 9 10 32 9 9 9 9 9 10 10 14 22 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT A 14 A 14 9 10 32 9 9 9 9 9 10 10 13 14 16 19 26 31 32 32 34 38 40 42 43
LCS_GDT E 15 E 15 9 10 32 9 9 9 9 9 10 10 13 14 14 15 16 19 22 23 30 34 39 42 43
LCS_GDT T 16 T 16 9 10 32 9 9 9 9 9 10 10 13 14 16 19 26 31 32 32 35 38 40 42 43
LCS_GDT G 17 G 17 9 10 32 9 9 9 9 12 14 18 20 22 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT Q 18 Q 18 4 10 32 3 3 5 9 13 15 18 20 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT N 19 N 19 4 14 32 3 5 8 12 14 16 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT W 20 W 20 12 14 32 11 11 12 15 15 17 20 23 24 25 26 27 29 30 31 34 38 40 42 43
LCS_GDT A 21 A 21 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT S 22 S 22 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT L 23 L 23 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT A 24 A 24 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT A 25 A 25 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT N 26 N 26 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT E 27 E 27 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT L 28 L 28 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT R 29 R 29 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT V 30 V 30 12 14 32 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT T 31 T 31 12 14 32 3 4 9 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT E 32 E 32 6 14 32 3 4 6 10 14 17 20 23 24 26 28 29 30 32 32 34 38 40 42 43
LCS_GDT R 33 R 33 4 6 32 4 5 6 8 14 17 19 21 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT P 34 P 34 4 5 32 4 4 4 4 5 13 17 20 23 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT F 35 F 35 4 7 32 4 4 6 10 14 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT W 36 W 36 4 8 32 4 4 7 13 14 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT I 37 I 37 4 8 32 4 4 4 10 13 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT S 38 S 38 4 8 32 3 4 6 10 13 17 21 23 24 26 28 29 31 32 32 34 35 40 42 43
LCS_GDT S 39 S 39 4 8 32 3 4 6 10 14 17 21 23 24 26 28 29 31 32 32 34 38 40 42 43
LCS_GDT F 40 F 40 4 8 32 4 9 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT I 41 I 41 4 8 32 4 5 9 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT G 42 G 42 4 8 32 3 5 9 15 15 17 21 23 24 26 28 29 31 32 32 34 38 40 42 43
LCS_GDT R 43 R 43 4 8 32 4 5 8 12 14 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT S 44 S 44 3 8 32 3 3 6 9 11 15 18 22 24 26 28 29 31 32 32 35 38 40 42 43
LCS_GDT K 45 K 45 3 4 31 3 3 3 5 7 7 9 11 13 17 22 28 31 32 32 35 38 40 42 43
LCS_AVERAGE LCS_A: 34.81 ( 16.22 22.62 65.60 )
GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00
GDT NUMBER_AT 11 11 12 15 15 17 21 23 24 26 28 29 31 32 32 35 38 40 42 43
GDT PERCENT_AT 25.00 25.00 27.27 34.09 34.09 38.64 47.73 52.27 54.55 59.09 63.64 65.91 70.45 72.73 72.73 79.55 86.36 90.91 95.45 97.73
GDT RMS_LOCAL 0.28 0.28 0.61 1.26 1.26 1.77 2.49 2.59 2.78 3.22 3.59 3.84 4.44 4.50 4.50 6.14 6.02 6.16 6.49 6.68
GDT RMS_ALL_AT 11.62 11.62 11.42 10.53 10.53 9.92 9.66 10.00 9.77 8.83 8.46 8.16 7.88 7.91 7.91 6.96 7.08 7.10 7.00 6.94
# Checking swapping
# possible swapping detected: E 27 E 27
# possible swapping detected: E 32 E 32
# Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at
LGA A 2 A 2 17.833 0 0.025 0.032 18.809 0.000 0.000 -
LGA V 3 V 3 17.503 0 0.657 1.344 20.704 0.000 0.000 16.200
LGA Q 4 Q 4 18.374 0 0.647 0.967 23.095 0.000 0.000 21.784
LGA G 5 G 5 16.407 0 0.079 0.079 17.885 0.000 0.000 -
LGA P 6 P 6 17.495 0 0.653 0.568 17.780 0.000 0.000 16.479
LGA W 7 W 7 15.034 0 0.369 1.110 17.039 0.000 0.000 16.532
LGA V 8 V 8 14.244 0 0.663 0.648 15.684 0.000 0.000 13.645
LGA G 9 G 9 12.790 0 0.464 0.464 13.300 0.000 0.000 -
LGA S 10 S 10 13.157 0 0.027 0.594 15.076 0.000 0.000 13.882
LGA S 11 S 11 18.255 0 0.075 0.578 21.921 0.000 0.000 21.921
LGA Y 12 Y 12 15.499 0 0.104 1.029 16.064 0.000 0.000 11.226
LGA V 13 V 13 10.664 0 0.117 1.159 12.486 0.000 0.000 9.395
LGA A 14 A 14 16.511 0 0.050 0.054 18.580 0.000 0.000 -
LGA E 15 E 15 18.650 0 0.058 1.180 25.747 0.000 0.000 25.747
LGA T 16 T 16 13.603 0 0.090 0.125 15.523 0.000 0.000 11.916
LGA G 17 G 17 10.616 0 0.218 0.218 11.507 0.000 0.000 -
LGA Q 18 Q 18 8.225 0 0.638 0.939 15.526 0.000 0.000 11.982
LGA N 19 N 19 4.110 0 0.076 0.987 7.311 10.000 6.364 7.061
LGA W 20 W 20 3.100 0 0.621 1.088 10.454 41.364 11.818 10.454
LGA A 21 A 21 1.682 0 0.036 0.035 2.254 51.364 51.273 -
LGA S 22 S 22 2.703 0 0.035 0.102 3.557 32.727 26.667 3.557
LGA L 23 L 23 2.739 0 0.041 0.145 5.107 39.091 22.500 5.026
LGA A 24 A 24 1.099 0 0.020 0.021 1.539 74.545 72.727 -
LGA A 25 A 25 1.015 0 0.048 0.048 1.708 69.545 65.818 -
LGA N 26 N 26 1.129 0 0.062 0.063 3.325 82.727 56.818 2.835
LGA E 27 E 27 1.116 0 0.091 0.999 6.518 65.909 35.556 6.518
LGA L 28 L 28 1.737 0 0.101 0.191 3.443 51.364 40.909 2.618
LGA R 29 R 29 1.539 0 0.082 1.562 5.405 51.364 35.868 5.043
LGA V 30 V 30 2.375 0 0.108 0.140 3.483 35.455 28.052 3.483
LGA T 31 T 31 2.017 0 0.636 1.296 3.798 44.545 36.883 3.229
LGA E 32 E 32 3.331 0 0.653 1.374 11.086 11.818 5.253 9.950
LGA R 33 R 33 6.106 0 0.506 0.526 14.486 2.727 0.992 14.486
LGA P 34 P 34 7.196 0 0.045 0.356 8.457 4.545 2.597 8.457
LGA F 35 F 35 4.305 0 0.041 1.233 13.213 4.091 1.488 13.213
LGA W 36 W 36 1.169 0 0.086 1.063 9.128 46.364 17.013 7.670
LGA I 37 I 37 3.492 0 0.198 0.858 6.085 23.182 11.591 6.085
LGA S 38 S 38 3.854 0 0.080 0.639 4.575 16.364 13.030 3.535
LGA S 39 S 39 2.499 0 0.035 0.079 3.359 42.273 35.758 2.738
LGA F 40 F 40 0.960 0 0.105 0.444 4.148 65.000 35.702 4.148
LGA I 41 I 41 2.930 0 0.623 1.297 5.157 24.091 22.273 3.009
LGA G 42 G 42 2.820 0 0.191 0.191 4.078 19.545 19.545 -
LGA R 43 R 43 2.830 0 0.609 1.147 8.201 30.455 15.041 8.201
LGA S 44 S 44 6.585 0 0.092 0.704 10.371 0.000 0.000 8.407
LGA K 45 K 45 11.735 0 0.687 0.727 16.345 0.000 0.000 16.345
# RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at
NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35
SUMMARY(RMSD_GDC): 6.916 6.753 8.328 21.374 15.262 4.675
#CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q
SUMMARY(GDT) 44 44 4.0 23 2.59 47.727 41.611 0.856
LGA_LOCAL RMSD: 2.586 Number of atoms: 23 under DIST: 4.00
LGA_ASGN_ATOMS RMSD: 10.000 Number of assigned atoms: 44
Std_ASGN_ATOMS RMSD: 6.916 Standard rmsd on all 44 assigned CA atoms
Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2)
X_new = 0.594010 * X + 0.797896 * Y + -0.102538 * Z + 18.287264
Y_new = -0.595302 * X + 0.350253 * Y + -0.723145 * Z + 34.415310
Z_new = -0.541080 * X + 0.490596 * Y + 0.683043 * Z + -1.769160
Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
Phi Theta Psi [DEG: Phi Theta Psi ]
XYZ: -0.786484 0.571721 0.622870 [DEG: -45.0622 32.7572 35.6878 ]
ZXZ: -0.140855 0.818876 -0.834293 [DEG: -8.0704 46.9181 -47.8015 ]
# END of job
REMARK ----------------------------------------------------------
REMARK Citing LGA:
REMARK Zemla A., LGA - a Method for Finding 3D Similarities in
REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31,
REMARK No. 13, pp. 3370-3374.
REMARK ----------------------------------------------------------
REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule
REMARK 1: T0953s2TS488_1-D1
REMARK 2: T0953s2-D1.pdb
REMARK GDT and LCS analysis
REMARK FIXED Atom-Atom correspondence
REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS488_1-D1.lga
REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global
REMARK SUMMARY: 44 44 4.0 23 2.59 41.611 6.92
REMARK ----------------------------------------------------------
MOLECULE T0953s2TS488_1-D1
PFRMAT TS
TARGET T0953s2
MODEL 1
PARENT 2b7e_A
ATOM 20 N ALA 2 5.620 27.991 -1.141 1.00 0.00 N
ATOM 21 CA ALA 2 5.496 29.067 -2.112 1.00 0.00 C
ATOM 22 C ALA 2 4.403 28.708 -3.092 1.00 0.00 C
ATOM 23 O ALA 2 4.158 27.529 -3.326 1.00 0.00 O
ATOM 24 CB ALA 2 6.812 29.305 -2.840 1.00 0.00 C
ATOM 30 N VAL 3 3.768 29.709 -3.697 1.00 0.00 N
ATOM 31 CA VAL 3 2.682 29.468 -4.655 1.00 0.00 C
ATOM 32 C VAL 3 3.098 28.596 -5.853 1.00 0.00 C
ATOM 33 O VAL 3 2.253 27.936 -6.459 1.00 0.00 O
ATOM 34 CB VAL 3 2.100 30.809 -5.141 1.00 0.00 C
ATOM 35 CG1 VAL 3 3.076 31.534 -6.044 1.00 0.00 C
ATOM 36 CG2 VAL 3 0.790 30.555 -5.871 1.00 0.00 C
ATOM 46 N GLN 4 4.389 28.588 -6.186 1.00 0.00 N
ATOM 47 CA GLN 4 4.903 27.760 -7.270 1.00 0.00 C
ATOM 48 C GLN 4 5.639 26.500 -6.784 1.00 0.00 C
ATOM 49 O GLN 4 6.264 25.812 -7.593 1.00 0.00 O
ATOM 50 CB GLN 4 5.862 28.561 -8.158 1.00 0.00 C
ATOM 51 CG GLN 4 5.248 29.755 -8.867 1.00 0.00 C
ATOM 52 CD GLN 4 4.119 29.360 -9.801 1.00 0.00 C
ATOM 53 OE1 GLN 4 4.255 28.425 -10.594 1.00 0.00 O
ATOM 54 NE2 GLN 4 2.999 30.069 -9.716 1.00 0.00 N
ATOM 63 N GLY 5 5.605 26.203 -5.479 1.00 0.00 N
ATOM 64 CA GLY 5 6.348 25.047 -4.977 1.00 0.00 C
ATOM 65 C GLY 5 5.464 23.874 -4.529 1.00 0.00 C
ATOM 66 O GLY 5 4.239 23.918 -4.663 1.00 0.00 O
ATOM 70 N PRO 6 6.102 22.834 -3.967 1.00 0.00 N
ATOM 71 CA PRO 6 5.569 21.558 -3.488 1.00 0.00 C
ATOM 72 C PRO 6 4.437 21.740 -2.498 1.00 0.00 C
ATOM 73 O PRO 6 4.552 22.516 -1.551 1.00 0.00 O
ATOM 74 CB PRO 6 6.781 20.909 -2.811 1.00 0.00 C
ATOM 75 CG PRO 6 7.950 21.462 -3.546 1.00 0.00 C
ATOM 76 CD PRO 6 7.572 22.889 -3.822 1.00 0.00 C
ATOM 84 N TRP 7 3.338 21.018 -2.753 1.00 0.00 N
ATOM 85 CA TRP 7 2.123 21.018 -1.930 1.00 0.00 C
ATOM 86 C TRP 7 1.223 22.230 -2.094 1.00 0.00 C
ATOM 87 O TRP 7 0.091 22.215 -1.615 1.00 0.00 O
ATOM 88 CB TRP 7 2.437 20.856 -0.435 1.00 0.00 C
ATOM 89 CG TRP 7 3.038 19.534 -0.093 1.00 0.00 C
ATOM 90 CD1 TRP 7 3.259 18.491 -0.942 1.00 0.00 C
ATOM 91 CD2 TRP 7 3.476 19.093 1.210 1.00 0.00 C
ATOM 92 NE1 TRP 7 3.806 17.437 -0.258 1.00 0.00 N
ATOM 93 CE2 TRP 7 3.948 17.784 1.061 1.00 0.00 C
ATOM 94 CE3 TRP 7 3.503 19.692 2.475 1.00 0.00 C
ATOM 95 CZ2 TRP 7 4.443 17.059 2.130 1.00 0.00 C
ATOM 96 CZ3 TRP 7 4.005 18.965 3.546 1.00 0.00 C
ATOM 97 CH2 TRP 7 4.463 17.683 3.375 1.00 0.00 C
ATOM 108 N VAL 8 1.688 23.284 -2.744 1.00 0.00 N
ATOM 109 CA VAL 8 0.875 24.471 -2.816 1.00 0.00 C
ATOM 110 C VAL 8 0.193 24.655 -4.156 1.00 0.00 C
ATOM 111 O VAL 8 0.735 24.092 -5.109 1.00 0.00 O
ATOM 112 CB VAL 8 1.737 25.688 -2.506 1.00 0.00 C
ATOM 113 CG1 VAL 8 0.899 26.938 -2.607 1.00 0.00 C
ATOM 114 CG2 VAL 8 2.332 25.542 -1.112 1.00 0.00 C
ATOM 124 N GLY 9 -1.128 24.594 -4.040 1.00 0.00 N
ATOM 125 CA GLY 9 -1.910 25.486 -4.876 1.00 0.00 C
ATOM 126 C GLY 9 -2.584 26.569 -4.036 1.00 0.00 C
ATOM 127 O GLY 9 -2.342 26.682 -2.832 1.00 0.00 O
ATOM 131 N SER 10 -3.439 27.356 -4.676 1.00 0.00 N
ATOM 132 CA SER 10 -4.101 28.458 -3.994 1.00 0.00 C
ATOM 133 C SER 10 -5.234 28.003 -3.066 1.00 0.00 C
ATOM 134 O SER 10 -5.508 28.669 -2.067 1.00 0.00 O
ATOM 135 CB SER 10 -4.603 29.471 -5.003 1.00 0.00 C
ATOM 136 OG SER 10 -3.536 30.081 -5.674 1.00 0.00 O
ATOM 142 N SER 11 -5.898 26.881 -3.375 1.00 0.00 N
ATOM 143 CA SER 11 -6.967 26.432 -2.484 1.00 0.00 C
ATOM 144 C SER 11 -6.354 25.780 -1.269 1.00 0.00 C
ATOM 145 O SER 11 -6.938 25.801 -0.187 1.00 0.00 O
ATOM 146 CB SER 11 -7.884 25.443 -3.157 1.00 0.00 C
ATOM 147 OG SER 11 -7.231 24.227 -3.372 1.00 0.00 O
ATOM 153 N TYR 12 -5.147 25.237 -1.443 1.00 0.00 N
ATOM 154 CA TYR 12 -4.400 24.657 -0.340 1.00 0.00 C
ATOM 155 C TYR 12 -4.109 25.687 0.729 1.00 0.00 C
ATOM 156 O TYR 12 -4.394 25.470 1.906 1.00 0.00 O
ATOM 157 CB TYR 12 -3.094 24.060 -0.820 1.00 0.00 C
ATOM 158 CG TYR 12 -2.264 23.486 0.296 1.00 0.00 C
ATOM 159 CD1 TYR 12 -2.718 22.359 0.952 1.00 0.00 C
ATOM 160 CD2 TYR 12 -1.049 24.056 0.645 1.00 0.00 C
ATOM 161 CE1 TYR 12 -1.958 21.787 1.942 1.00 0.00 C
ATOM 162 CE2 TYR 12 -0.283 23.478 1.640 1.00 0.00 C
ATOM 163 CZ TYR 12 -0.736 22.340 2.281 1.00 0.00 C
ATOM 164 OH TYR 12 0.013 21.720 3.249 1.00 0.00 O
ATOM 174 N VAL 13 -3.530 26.817 0.311 1.00 0.00 N
ATOM 175 CA VAL 13 -3.219 27.863 1.275 1.00 0.00 C
ATOM 176 C VAL 13 -4.479 28.570 1.758 1.00 0.00 C
ATOM 177 O VAL 13 -4.487 29.125 2.853 1.00 0.00 O
ATOM 178 CB VAL 13 -2.219 28.876 0.683 1.00 0.00 C
ATOM 179 CG1 VAL 13 -0.929 28.164 0.341 1.00 0.00 C
ATOM 180 CG2 VAL 13 -2.794 29.534 -0.551 1.00 0.00 C
ATOM 190 N ALA 14 -5.558 28.539 0.988 1.00 0.00 N
ATOM 191 CA ALA 14 -6.800 29.093 1.489 1.00 0.00 C
ATOM 192 C ALA 14 -7.337 28.227 2.637 1.00 0.00 C
ATOM 193 O ALA 14 -7.662 28.722 3.712 1.00 0.00 O
ATOM 194 CB ALA 14 -7.830 29.194 0.376 1.00 0.00 C
ATOM 200 N GLU 15 -7.398 26.921 2.403 1.00 0.00 N
ATOM 201 CA GLU 15 -7.942 25.991 3.383 1.00 0.00 C
ATOM 202 C GLU 15 -7.096 25.820 4.634 1.00 0.00 C
ATOM 203 O GLU 15 -7.606 25.906 5.753 1.00 0.00 O
ATOM 204 CB GLU 15 -8.143 24.623 2.749 1.00 0.00 C
ATOM 205 CG GLU 15 -8.836 23.622 3.662 1.00 0.00 C
ATOM 206 CD GLU 15 -9.103 22.297 3.010 1.00 0.00 C
ATOM 207 OE1 GLU 15 -8.216 21.481 2.973 1.00 0.00 O
ATOM 208 OE2 GLU 15 -10.204 22.092 2.555 1.00 0.00 O
ATOM 215 N THR 16 -5.809 25.543 4.448 1.00 0.00 N
ATOM 216 CA THR 16 -4.937 25.269 5.577 1.00 0.00 C
ATOM 217 C THR 16 -4.236 26.517 6.075 1.00 0.00 C
ATOM 218 O THR 16 -3.971 26.644 7.273 1.00 0.00 O
ATOM 219 CB THR 16 -3.875 24.232 5.177 1.00 0.00 C
ATOM 220 OG1 THR 16 -3.066 24.765 4.121 1.00 0.00 O
ATOM 221 CG2 THR 16 -4.537 22.954 4.690 1.00 0.00 C
ATOM 229 N GLY 17 -3.981 27.451 5.165 1.00 0.00 N
ATOM 230 CA GLY 17 -3.302 28.688 5.509 1.00 0.00 C
ATOM 231 C GLY 17 -4.132 29.550 6.434 1.00 0.00 C
ATOM 232 O GLY 17 -3.572 30.171 7.330 1.00 0.00 O
ATOM 236 N GLN 18 -5.462 29.574 6.259 1.00 0.00 N
ATOM 237 CA GLN 18 -6.299 30.353 7.171 1.00 0.00 C
ATOM 238 C GLN 18 -6.223 29.848 8.608 1.00 0.00 C
ATOM 239 O GLN 18 -6.240 30.648 9.545 1.00 0.00 O
ATOM 240 CB GLN 18 -7.764 30.370 6.722 1.00 0.00 C
ATOM 241 CG GLN 18 -8.047 31.208 5.486 1.00 0.00 C
ATOM 242 CD GLN 18 -9.505 31.122 5.070 1.00 0.00 C
ATOM 243 OE1 GLN 18 -10.395 31.050 5.926 1.00 0.00 O
ATOM 244 NE2 GLN 18 -9.756 31.116 3.768 1.00 0.00 N
ATOM 253 N ASN 19 -6.132 28.532 8.787 1.00 0.00 N
ATOM 254 CA ASN 19 -6.021 27.984 10.131 1.00 0.00 C
ATOM 255 C ASN 19 -4.691 28.392 10.747 1.00 0.00 C
ATOM 256 O ASN 19 -4.637 28.821 11.903 1.00 0.00 O
ATOM 257 CB ASN 19 -6.163 26.475 10.107 1.00 0.00 C
ATOM 258 CG ASN 19 -7.576 26.036 9.852 1.00 0.00 C
ATOM 259 OD1 ASN 19 -8.529 26.791 10.083 1.00 0.00 O
ATOM 260 ND2 ASN 19 -7.732 24.826 9.378 1.00 0.00 N
ATOM 267 N TRP 20 -3.635 28.302 9.943 1.00 0.00 N
ATOM 268 CA TRP 20 -2.297 28.670 10.373 1.00 0.00 C
ATOM 269 C TRP 20 -2.217 30.167 10.644 1.00 0.00 C
ATOM 270 O TRP 20 -1.535 30.599 11.571 1.00 0.00 O
ATOM 271 CB TRP 20 -1.297 28.271 9.293 1.00 0.00 C
ATOM 272 CG TRP 20 -1.292 26.794 9.035 1.00 0.00 C
ATOM 273 CD1 TRP 20 -1.762 25.819 9.864 1.00 0.00 C
ATOM 274 CD2 TRP 20 -0.821 26.113 7.843 1.00 0.00 C
ATOM 275 NE1 TRP 20 -1.616 24.583 9.276 1.00 0.00 N
ATOM 276 CE2 TRP 20 -1.040 24.750 8.039 1.00 0.00 C
ATOM 277 CE3 TRP 20 -0.247 26.550 6.641 1.00 0.00 C
ATOM 278 CZ2 TRP 20 -0.704 23.804 7.080 1.00 0.00 C
ATOM 279 CZ3 TRP 20 0.088 25.604 5.678 1.00 0.00 C
ATOM 280 CH2 TRP 20 -0.135 24.268 5.893 1.00 0.00 C
ATOM 291 N ALA 21 -2.934 30.948 9.834 1.00 0.00 N
ATOM 292 CA ALA 21 -2.985 32.391 9.968 1.00 0.00 C
ATOM 293 C ALA 21 -3.619 32.799 11.286 1.00 0.00 C
ATOM 294 O ALA 21 -3.150 33.741 11.923 1.00 0.00 O
ATOM 295 CB ALA 21 -3.756 33.008 8.811 1.00 0.00 C
ATOM 301 N SER 22 -4.673 32.092 11.712 1.00 0.00 N
ATOM 302 CA SER 22 -5.299 32.434 12.985 1.00 0.00 C
ATOM 303 C SER 22 -4.375 32.086 14.149 1.00 0.00 C
ATOM 304 O SER 22 -4.358 32.790 15.160 1.00 0.00 O
ATOM 305 CB SER 22 -6.609 31.699 13.149 1.00 0.00 C
ATOM 306 OG SER 22 -6.392 30.326 13.311 1.00 0.00 O
ATOM 312 N LEU 23 -3.558 31.043 13.978 1.00 0.00 N
ATOM 313 CA LEU 23 -2.577 30.690 14.995 1.00 0.00 C
ATOM 314 C LEU 23 -1.506 31.767 15.079 1.00 0.00 C
ATOM 315 O LEU 23 -1.077 32.141 16.175 1.00 0.00 O
ATOM 316 CB LEU 23 -1.937 29.335 14.673 1.00 0.00 C
ATOM 317 CG LEU 23 -2.852 28.119 14.818 1.00 0.00 C
ATOM 318 CD1 LEU 23 -2.148 26.887 14.266 1.00 0.00 C
ATOM 319 CD2 LEU 23 -3.190 27.943 16.289 1.00 0.00 C
ATOM 331 N ALA 24 -1.107 32.284 13.917 1.00 0.00 N
ATOM 332 CA ALA 24 -0.144 33.365 13.842 1.00 0.00 C
ATOM 333 C ALA 24 -0.715 34.619 14.475 1.00 0.00 C
ATOM 334 O ALA 24 -0.008 35.319 15.185 1.00 0.00 O
ATOM 335 CB ALA 24 0.253 33.635 12.397 1.00 0.00 C
ATOM 341 N ALA 25 -2.004 34.879 14.240 1.00 0.00 N
ATOM 342 CA ALA 25 -2.681 36.039 14.810 1.00 0.00 C
ATOM 343 C ALA 25 -2.672 35.979 16.328 1.00 0.00 C
ATOM 344 O ALA 25 -2.531 37.009 16.997 1.00 0.00 O
ATOM 345 CB ALA 25 -4.109 36.122 14.297 1.00 0.00 C
ATOM 351 N ASN 26 -2.801 34.774 16.878 1.00 0.00 N
ATOM 352 CA ASN 26 -2.739 34.619 18.318 1.00 0.00 C
ATOM 353 C ASN 26 -1.338 34.996 18.808 1.00 0.00 C
ATOM 354 O ASN 26 -1.194 35.794 19.735 1.00 0.00 O
ATOM 355 CB ASN 26 -3.085 33.198 18.729 1.00 0.00 C
ATOM 356 CG ASN 26 -4.536 32.857 18.525 1.00 0.00 C
ATOM 357 OD1 ASN 26 -5.373 33.731 18.282 1.00 0.00 O
ATOM 358 ND2 ASN 26 -4.853 31.591 18.627 1.00 0.00 N
ATOM 365 N GLU 27 -0.308 34.468 18.136 1.00 0.00 N
ATOM 366 CA GLU 27 1.094 34.776 18.452 1.00 0.00 C
ATOM 367 C GLU 27 1.393 36.268 18.343 1.00 0.00 C
ATOM 368 O GLU 27 2.055 36.851 19.205 1.00 0.00 O
ATOM 369 CB GLU 27 2.037 34.004 17.526 1.00 0.00 C
ATOM 370 CG GLU 27 3.514 34.278 17.786 1.00 0.00 C
ATOM 371 CD GLU 27 4.441 33.484 16.908 1.00 0.00 C
ATOM 372 OE1 GLU 27 3.976 32.626 16.197 1.00 0.00 O
ATOM 373 OE2 GLU 27 5.623 33.744 16.944 1.00 0.00 O
ATOM 380 N LEU 28 0.900 36.871 17.269 1.00 0.00 N
ATOM 381 CA LEU 28 1.052 38.285 16.959 1.00 0.00 C
ATOM 382 C LEU 28 0.325 39.235 17.910 1.00 0.00 C
ATOM 383 O LEU 28 0.583 40.439 17.869 1.00 0.00 O
ATOM 384 CB LEU 28 0.529 38.542 15.546 1.00 0.00 C
ATOM 385 CG LEU 28 1.347 37.992 14.387 1.00 0.00 C
ATOM 386 CD1 LEU 28 0.541 38.116 13.116 1.00 0.00 C
ATOM 387 CD2 LEU 28 2.607 38.806 14.264 1.00 0.00 C
ATOM 399 N ARG 29 -0.596 38.715 18.730 1.00 0.00 N
ATOM 400 CA ARG 29 -1.393 39.531 19.641 1.00 0.00 C
ATOM 401 C ARG 29 -2.254 40.516 18.852 1.00 0.00 C
ATOM 402 O ARG 29 -2.330 41.701 19.182 1.00 0.00 O
ATOM 403 CB ARG 29 -0.506 40.280 20.632 1.00 0.00 C
ATOM 404 CG ARG 29 0.352 39.395 21.525 1.00 0.00 C
ATOM 405 CD ARG 29 1.144 40.199 22.493 1.00 0.00 C
ATOM 406 NE ARG 29 1.977 39.365 23.348 1.00 0.00 N
ATOM 407 CZ ARG 29 2.853 39.832 24.261 1.00 0.00 C
ATOM 408 NH1 ARG 29 3.004 41.128 24.434 1.00 0.00 N
ATOM 409 NH2 ARG 29 3.564 38.987 24.986 1.00 0.00 N
ATOM 423 N VAL 30 -2.911 40.001 17.817 1.00 0.00 N
ATOM 424 CA VAL 30 -3.766 40.790 16.940 1.00 0.00 C
ATOM 425 C VAL 30 -5.026 41.306 17.625 1.00 0.00 C
ATOM 426 O VAL 30 -5.659 40.610 18.414 1.00 0.00 O
ATOM 427 CB VAL 30 -4.155 39.959 15.692 1.00 0.00 C
ATOM 428 CG1 VAL 30 -5.195 40.681 14.842 1.00 0.00 C
ATOM 429 CG2 VAL 30 -2.910 39.722 14.869 1.00 0.00 C
ATOM 439 N THR 31 -5.392 42.536 17.309 1.00 0.00 N
ATOM 440 CA THR 31 -6.573 43.165 17.880 1.00 0.00 C
ATOM 441 C THR 31 -7.307 44.021 16.843 1.00 0.00 C
ATOM 442 O THR 31 -7.199 43.767 15.644 1.00 0.00 O
ATOM 443 CB THR 31 -6.199 43.990 19.140 1.00 0.00 C
ATOM 444 OG1 THR 31 -7.403 44.441 19.772 1.00 0.00 O
ATOM 445 CG2 THR 31 -5.284 45.168 18.835 1.00 0.00 C
ATOM 453 N GLU 32 -8.107 44.982 17.301 1.00 0.00 N
ATOM 454 CA GLU 32 -8.916 45.811 16.399 1.00 0.00 C
ATOM 455 C GLU 32 -8.215 47.039 15.792 1.00 0.00 C
ATOM 456 O GLU 32 -8.845 47.805 15.059 1.00 0.00 O
ATOM 457 CB GLU 32 -10.172 46.284 17.118 1.00 0.00 C
ATOM 458 CG GLU 32 -11.137 45.172 17.480 1.00 0.00 C
ATOM 459 CD GLU 32 -12.357 45.695 18.181 1.00 0.00 C
ATOM 460 OE1 GLU 32 -12.441 46.887 18.361 1.00 0.00 O
ATOM 461 OE2 GLU 32 -13.203 44.910 18.537 1.00 0.00 O
ATOM 468 N ARG 33 -6.934 47.243 16.101 1.00 0.00 N
ATOM 469 CA ARG 33 -6.196 48.405 15.602 1.00 0.00 C
ATOM 470 C ARG 33 -4.793 48.135 14.964 1.00 0.00 C
ATOM 471 O ARG 33 -3.926 49.003 15.064 1.00 0.00 O
ATOM 472 CB ARG 33 -6.001 49.398 16.737 1.00 0.00 C
ATOM 473 CG ARG 33 -7.282 50.025 17.280 1.00 0.00 C
ATOM 474 CD ARG 33 -7.936 50.909 16.283 1.00 0.00 C
ATOM 475 NE ARG 33 -9.120 51.552 16.829 1.00 0.00 N
ATOM 476 CZ ARG 33 -10.363 51.029 16.804 1.00 0.00 C
ATOM 477 NH1 ARG 33 -10.581 49.855 16.256 1.00 0.00 N
ATOM 478 NH2 ARG 33 -11.372 51.704 17.334 1.00 0.00 N
ATOM 492 N PRO 34 -4.531 46.965 14.326 1.00 0.00 N
ATOM 493 CA PRO 34 -3.262 46.736 13.637 1.00 0.00 C
ATOM 494 C PRO 34 -3.454 46.748 12.131 1.00 0.00 C
ATOM 495 O PRO 34 -4.573 46.871 11.630 1.00 0.00 O
ATOM 496 CB PRO 34 -2.791 45.371 14.142 1.00 0.00 C
ATOM 497 CG PRO 34 -4.028 44.642 14.386 1.00 0.00 C
ATOM 498 CD PRO 34 -4.937 45.692 14.957 1.00 0.00 C
ATOM 506 N PHE 35 -2.350 46.591 11.412 1.00 0.00 N
ATOM 507 CA PHE 35 -2.371 46.579 9.964 1.00 0.00 C
ATOM 508 C PHE 35 -1.695 45.324 9.430 1.00 0.00 C
ATOM 509 O PHE 35 -0.719 44.848 10.008 1.00 0.00 O
ATOM 510 CB PHE 35 -1.671 47.824 9.426 1.00 0.00 C
ATOM 511 CG PHE 35 -2.335 49.093 9.865 1.00 0.00 C
ATOM 512 CD1 PHE 35 -1.926 49.741 11.024 1.00 0.00 C
ATOM 513 CD2 PHE 35 -3.378 49.637 9.135 1.00 0.00 C
ATOM 514 CE1 PHE 35 -2.547 50.901 11.442 1.00 0.00 C
ATOM 515 CE2 PHE 35 -4.000 50.798 9.549 1.00 0.00 C
ATOM 516 CZ PHE 35 -3.583 51.430 10.704 1.00 0.00 C
ATOM 526 N TRP 36 -2.213 44.797 8.322 1.00 0.00 N
ATOM 527 CA TRP 36 -1.656 43.597 7.717 1.00 0.00 C
ATOM 528 C TRP 36 -0.268 43.908 7.139 1.00 0.00 C
ATOM 529 O TRP 36 0.014 45.048 6.771 1.00 0.00 O
ATOM 530 CB TRP 36 -2.607 43.018 6.657 1.00 0.00 C
ATOM 531 CG TRP 36 -2.171 41.668 6.163 1.00 0.00 C
ATOM 532 CD1 TRP 36 -1.925 40.582 6.946 1.00 0.00 C
ATOM 533 CD2 TRP 36 -1.933 41.235 4.799 1.00 0.00 C
ATOM 534 NE1 TRP 36 -1.528 39.518 6.178 1.00 0.00 N
ATOM 535 CE2 TRP 36 -1.528 39.901 4.862 1.00 0.00 C
ATOM 536 CE3 TRP 36 -2.027 41.870 3.551 1.00 0.00 C
ATOM 537 CZ2 TRP 36 -1.203 39.178 3.725 1.00 0.00 C
ATOM 538 CZ3 TRP 36 -1.703 41.143 2.411 1.00 0.00 C
ATOM 539 CH2 TRP 36 -1.301 39.832 2.498 1.00 0.00 C
ATOM 550 N ILE 37 0.600 42.893 7.105 1.00 0.00 N
ATOM 551 CA ILE 37 2.007 42.974 6.661 1.00 0.00 C
ATOM 552 C ILE 37 2.911 43.689 7.653 1.00 0.00 C
ATOM 553 O ILE 37 3.820 43.059 8.191 1.00 0.00 O
ATOM 554 CB ILE 37 2.153 43.652 5.277 1.00 0.00 C
ATOM 555 CG1 ILE 37 1.412 42.842 4.228 1.00 0.00 C
ATOM 556 CG2 ILE 37 3.619 43.768 4.885 1.00 0.00 C
ATOM 557 CD1 ILE 37 1.938 41.431 4.100 1.00 0.00 C
ATOM 569 N SER 38 2.662 44.979 7.897 1.00 0.00 N
ATOM 570 CA SER 38 3.439 45.846 8.811 1.00 0.00 C
ATOM 571 C SER 38 4.105 45.178 10.048 1.00 0.00 C
ATOM 572 O SER 38 5.182 45.604 10.466 1.00 0.00 O
ATOM 573 CB SER 38 2.534 46.953 9.308 1.00 0.00 C
ATOM 574 OG SER 38 2.155 47.798 8.257 1.00 0.00 O
ATOM 580 N SER 39 3.499 44.122 10.593 1.00 0.00 N
ATOM 581 CA SER 39 4.080 43.364 11.704 1.00 0.00 C
ATOM 582 C SER 39 3.917 41.858 11.493 1.00 0.00 C
ATOM 583 O SER 39 4.583 41.052 12.147 1.00 0.00 O
ATOM 584 CB SER 39 3.432 43.766 13.013 1.00 0.00 C
ATOM 585 OG SER 39 2.072 43.428 13.026 1.00 0.00 O
ATOM 591 N PHE 40 3.043 41.494 10.563 1.00 0.00 N
ATOM 592 CA PHE 40 2.717 40.115 10.267 1.00 0.00 C
ATOM 593 C PHE 40 3.829 39.420 9.493 1.00 0.00 C
ATOM 594 O PHE 40 4.265 38.326 9.867 1.00 0.00 O
ATOM 595 CB PHE 40 1.430 40.104 9.427 1.00 0.00 C
ATOM 596 CG PHE 40 0.178 40.446 10.181 1.00 0.00 C
ATOM 597 CD1 PHE 40 -0.012 41.716 10.702 1.00 0.00 C
ATOM 598 CD2 PHE 40 -0.829 39.508 10.341 1.00 0.00 C
ATOM 599 CE1 PHE 40 -1.172 42.030 11.386 1.00 0.00 C
ATOM 600 CE2 PHE 40 -1.992 39.821 11.018 1.00 0.00 C
ATOM 601 CZ PHE 40 -2.159 41.085 11.545 1.00 0.00 C
ATOM 611 N ILE 41 4.289 40.059 8.416 1.00 0.00 N
ATOM 612 CA ILE 41 5.319 39.470 7.571 1.00 0.00 C
ATOM 613 C ILE 41 6.684 39.561 8.237 1.00 0.00 C
ATOM 614 O ILE 41 7.569 38.748 7.970 1.00 0.00 O
ATOM 615 CB ILE 41 5.350 40.136 6.180 1.00 0.00 C
ATOM 616 CG1 ILE 41 6.007 39.194 5.173 1.00 0.00 C
ATOM 617 CG2 ILE 41 6.132 41.440 6.230 1.00 0.00 C
ATOM 618 CD1 ILE 41 5.808 39.616 3.736 1.00 0.00 C
ATOM 630 N GLY 42 6.851 40.554 9.114 1.00 0.00 N
ATOM 631 CA GLY 42 8.098 40.731 9.833 1.00 0.00 C
ATOM 632 C GLY 42 8.278 39.645 10.880 1.00 0.00 C
ATOM 633 O GLY 42 9.380 39.124 11.059 1.00 0.00 O
ATOM 637 N ARG 43 7.192 39.292 11.562 1.00 0.00 N
ATOM 638 CA ARG 43 7.248 38.264 12.588 1.00 0.00 C
ATOM 639 C ARG 43 7.384 36.838 12.069 1.00 0.00 C
ATOM 640 O ARG 43 8.144 36.055 12.640 1.00 0.00 O
ATOM 641 CB ARG 43 6.010 38.304 13.445 1.00 0.00 C
ATOM 642 CG ARG 43 5.958 37.218 14.511 1.00 0.00 C
ATOM 643 CD ARG 43 7.050 37.354 15.505 1.00 0.00 C
ATOM 644 NE ARG 43 7.017 36.280 16.484 1.00 0.00 N
ATOM 645 CZ ARG 43 7.930 36.081 17.452 1.00 0.00 C
ATOM 646 NH1 ARG 43 8.954 36.895 17.592 1.00 0.00 N
ATOM 647 NH2 ARG 43 7.775 35.047 18.256 1.00 0.00 N
ATOM 661 N SER 44 6.648 36.478 11.017 1.00 0.00 N
ATOM 662 CA SER 44 6.701 35.084 10.588 1.00 0.00 C
ATOM 663 C SER 44 6.486 34.805 9.119 1.00 0.00 C
ATOM 664 O SER 44 5.691 35.454 8.436 1.00 0.00 O
ATOM 665 CB SER 44 5.670 34.275 11.344 1.00 0.00 C
ATOM 666 OG SER 44 5.666 32.944 10.896 1.00 0.00 O
ATOM 672 N LYS 45 7.184 33.763 8.666 1.00 0.00 N
ATOM 673 CA LYS 45 7.144 33.279 7.296 1.00 0.00 C
ATOM 674 C LYS 45 5.819 32.628 6.933 1.00 0.00 C
ATOM 675 O LYS 45 5.555 32.413 5.754 1.00 0.00 O
ATOM 676 CB LYS 45 8.280 32.295 7.047 1.00 0.00 C
ATOM 677 CG LYS 45 9.665 32.924 7.055 1.00 0.00 C
ATOM 678 CD LYS 45 10.748 31.882 6.802 1.00 0.00 C
ATOM 679 CE LYS 45 12.137 32.509 6.810 1.00 0.00 C
ATOM 680 NZ LYS 45 13.206 31.495 6.598 1.00 0.00 N
TER
END