####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS004_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 1 - 33 4.74 8.17 LONGEST_CONTINUOUS_SEGMENT: 33 2 - 34 4.91 7.90 LCS_AVERAGE: 78.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 18 - 33 1.99 10.51 LCS_AVERAGE: 31.47 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 3 - 15 0.57 8.81 LCS_AVERAGE: 20.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 33 0 3 4 5 7 10 12 14 17 17 22 26 28 32 33 35 37 37 40 41 LCS_GDT Q 2 Q 2 3 14 33 0 3 4 5 9 10 12 14 18 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT E 3 E 3 13 14 33 10 12 13 13 13 14 15 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT T 4 T 4 13 14 33 10 12 13 13 13 15 17 19 21 23 27 28 30 32 33 35 37 37 40 41 LCS_GDT R 5 R 5 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 6 K 6 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 7 K 7 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT C 8 C 8 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT T 9 T 9 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT E 10 E 10 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT M 11 M 11 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 12 K 12 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 13 K 13 13 14 33 10 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 14 K 14 13 14 33 9 12 13 13 13 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT F 15 F 15 13 14 33 6 11 13 13 13 14 15 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT K 16 K 16 4 14 33 3 4 4 7 12 16 17 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT N 17 N 17 4 7 33 3 4 7 9 12 16 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT C 18 C 18 5 16 33 3 8 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT E 19 E 19 5 16 33 4 8 10 15 16 17 18 19 21 24 27 28 30 30 32 33 34 37 40 41 LCS_GDT V 20 V 20 5 16 33 5 8 10 15 16 17 18 19 21 24 27 28 30 30 32 33 35 37 40 41 LCS_GDT R 21 R 21 9 16 33 5 8 10 15 16 16 18 19 21 22 24 27 29 30 32 33 35 37 40 41 LCS_GDT C 22 C 22 9 16 33 3 6 9 15 16 17 18 19 21 21 23 26 28 30 32 33 35 37 40 41 LCS_GDT D 23 D 23 9 16 33 4 7 10 12 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT E 24 E 24 9 16 33 6 7 10 11 13 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT S 25 S 25 9 16 33 6 7 10 12 13 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT N 26 N 26 9 16 33 6 7 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT H 27 H 27 9 16 33 6 7 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT C 28 C 28 9 16 33 6 8 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT V 29 V 29 9 16 33 6 8 10 15 16 17 18 19 21 21 27 28 30 30 32 35 37 37 40 41 LCS_GDT E 30 E 30 8 16 33 5 8 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT V 31 V 31 7 16 33 5 8 10 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 LCS_GDT R 32 R 32 7 16 33 5 8 10 15 16 17 18 19 21 24 25 28 30 32 33 35 37 37 40 41 LCS_GDT C 33 C 33 7 16 33 3 8 10 15 16 17 18 19 21 24 25 28 30 32 33 35 37 37 40 41 LCS_GDT S 34 S 34 7 11 33 3 7 10 15 16 17 18 19 21 21 23 26 27 32 33 35 37 37 40 41 LCS_GDT D 35 D 35 5 11 28 3 4 9 15 16 17 18 19 21 21 23 26 27 32 33 35 37 37 40 41 LCS_GDT T 36 T 36 3 5 27 3 3 4 5 7 7 13 18 21 21 23 26 26 31 32 35 37 37 40 41 LCS_GDT K 37 K 37 5 5 27 5 5 5 5 5 7 10 17 18 20 23 26 26 28 29 35 37 37 40 41 LCS_GDT Y 38 Y 38 5 5 27 5 5 5 5 5 7 15 17 18 20 23 26 26 28 29 35 37 37 40 41 LCS_GDT T 39 T 39 5 5 27 5 5 5 7 9 14 15 17 18 20 23 26 26 32 33 35 37 37 40 41 LCS_GDT L 40 L 40 5 5 27 5 5 5 7 9 12 15 17 18 20 23 26 26 32 33 35 37 37 40 41 LCS_GDT C 41 C 41 5 5 27 5 5 5 5 5 14 14 16 17 17 19 26 26 31 33 35 37 37 40 41 LCS_AVERAGE LCS_A: 43.41 ( 20.70 31.47 78.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 15 16 17 18 19 21 24 27 28 30 32 33 35 37 37 40 41 GDT PERCENT_AT 24.39 29.27 31.71 36.59 39.02 41.46 43.90 46.34 51.22 58.54 65.85 68.29 73.17 78.05 80.49 85.37 90.24 90.24 97.56 100.00 GDT RMS_LOCAL 0.26 0.43 0.57 1.42 1.61 2.02 2.03 2.28 3.20 3.52 3.78 3.91 4.22 5.21 5.38 5.61 5.83 5.83 6.30 6.44 GDT RMS_ALL_AT 8.60 8.68 8.81 11.15 10.95 10.39 10.57 10.24 9.44 8.88 8.81 8.66 8.10 6.65 6.60 6.52 6.53 6.53 6.44 6.44 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 12.588 0 0.149 0.203 14.550 0.000 0.000 11.903 LGA Q 2 Q 2 13.182 0 0.683 1.252 17.087 0.000 0.000 14.558 LGA E 3 E 3 16.451 0 0.631 0.992 20.806 0.000 0.000 20.806 LGA T 4 T 4 13.727 0 0.056 1.114 14.684 0.000 0.000 12.496 LGA R 5 R 5 16.960 0 0.045 0.996 23.057 0.000 0.000 20.108 LGA K 6 K 6 18.499 0 0.026 1.304 22.929 0.000 0.000 22.929 LGA K 7 K 7 14.776 0 0.049 0.961 15.888 0.000 0.000 12.196 LGA C 8 C 8 14.240 0 0.020 0.109 15.227 0.000 0.000 14.529 LGA T 9 T 9 17.939 0 0.023 0.062 21.256 0.000 0.000 20.000 LGA E 10 E 10 17.426 0 0.035 1.441 22.369 0.000 0.000 22.369 LGA M 11 M 11 13.428 0 0.103 1.473 15.812 0.000 0.000 15.812 LGA K 12 K 12 14.802 0 0.068 0.616 20.182 0.000 0.000 20.182 LGA K 13 K 13 18.579 0 0.090 0.948 23.189 0.000 0.000 22.471 LGA K 14 K 14 16.452 0 0.212 0.536 20.090 0.000 0.000 20.090 LGA F 15 F 15 13.118 0 0.125 0.301 22.799 0.000 0.000 22.799 LGA K 16 K 16 7.240 0 0.669 1.304 9.370 0.000 0.000 7.610 LGA N 17 N 17 4.461 0 0.069 1.112 8.116 8.636 5.227 4.662 LGA C 18 C 18 0.887 0 0.062 0.788 2.175 71.364 69.697 1.962 LGA E 19 E 19 1.876 0 0.177 1.005 7.514 54.545 30.505 6.835 LGA V 20 V 20 1.761 0 0.052 0.059 2.084 44.545 47.273 1.867 LGA R 21 R 21 2.484 0 0.092 1.126 10.401 44.545 19.174 10.401 LGA C 22 C 22 1.762 0 0.101 0.860 5.597 55.000 43.030 5.597 LGA D 23 D 23 2.257 0 0.202 1.079 3.098 33.636 37.500 2.338 LGA E 24 E 24 3.723 0 0.022 0.707 6.379 12.727 6.869 5.350 LGA S 25 S 25 3.462 0 0.109 0.648 5.769 22.727 16.970 5.769 LGA N 26 N 26 1.021 0 0.096 1.138 4.351 70.000 55.000 4.351 LGA H 27 H 27 1.624 0 0.058 0.207 4.600 48.636 30.545 3.941 LGA C 28 C 28 2.093 0 0.131 0.174 2.709 51.364 43.333 2.709 LGA V 29 V 29 2.123 0 0.103 0.131 2.251 38.182 38.182 2.196 LGA E 30 E 30 2.317 0 0.061 0.607 5.441 44.545 23.434 4.764 LGA V 31 V 31 1.042 0 0.070 0.075 1.422 69.545 77.403 0.241 LGA R 32 R 32 1.584 0 0.271 1.300 3.576 54.545 46.116 3.295 LGA C 33 C 33 1.872 0 0.473 0.545 3.597 37.727 40.000 1.813 LGA S 34 S 34 1.713 0 0.339 0.731 2.535 47.727 50.000 0.844 LGA D 35 D 35 1.775 0 0.634 0.911 3.574 32.727 35.227 3.574 LGA T 36 T 36 7.481 0 0.463 0.923 9.548 0.000 0.000 7.613 LGA K 37 K 37 9.218 0 0.383 1.462 14.116 0.000 0.000 14.116 LGA Y 38 Y 38 9.761 0 0.262 1.362 16.170 0.000 0.000 16.170 LGA T 39 T 39 9.299 0 0.234 0.969 12.328 0.000 0.000 9.384 LGA L 40 L 40 9.202 0 0.046 0.965 12.058 0.000 0.000 8.435 LGA C 41 C 41 9.263 0 0.538 1.154 11.296 0.000 0.000 11.296 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 6.438 6.374 7.525 20.554 17.451 11.885 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 19 2.28 49.390 45.169 0.799 LGA_LOCAL RMSD: 2.279 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.240 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.438 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.023739 * X + 0.388156 * Y + 0.921288 * Z + -6.034440 Y_new = -0.985217 * X + 0.147308 * Y + -0.087450 * Z + 4.933222 Z_new = -0.169657 * X + -0.909745 * Y + 0.378921 * Z + -1.146248 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.594887 0.170482 -1.176135 [DEG: -91.3803 9.7679 -67.3876 ] ZXZ: 1.476158 1.182166 -2.957222 [DEG: 84.5776 67.7331 -169.4363 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS004_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 19 2.28 45.169 6.44 REMARK ---------------------------------------------------------- MOLECULE T0955TS004_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 3ka5_A ATOM 1 N SER 1 -7.539 -5.899 3.344 1.00 1.48 N ATOM 2 CA SER 1 -7.416 -5.236 2.025 1.00 1.48 C ATOM 3 C SER 1 -8.596 -4.313 1.815 1.00 1.48 C ATOM 4 O SER 1 -9.551 -4.463 2.561 1.00 1.48 O ATOM 5 CB SER 1 -7.328 -6.328 0.975 1.00 1.48 C ATOM 6 OG SER 1 -6.306 -7.206 1.401 1.00 1.48 O ATOM 7 N GLN 2 -8.534 -3.334 0.916 1.00 1.40 N ATOM 8 CA GLN 2 -9.668 -2.442 0.620 1.00 1.40 C ATOM 9 C GLN 2 -9.505 -1.952 -0.817 1.00 1.40 C ATOM 10 O GLN 2 -8.398 -1.939 -1.323 1.00 1.40 O ATOM 11 CB GLN 2 -9.585 -1.183 1.505 1.00 1.40 C ATOM 12 CG GLN 2 -10.046 -1.307 2.955 1.00 1.40 C ATOM 13 CD GLN 2 -9.783 -0.038 3.734 1.00 1.40 C ATOM 14 OE1 GLN 2 -8.643 0.396 3.852 1.00 1.40 O ATOM 15 NE2 GLN 2 -10.806 0.573 4.263 1.00 1.40 N ATOM 16 N GLU 3 -10.593 -1.524 -1.441 1.00 1.61 N ATOM 17 CA GLU 3 -10.584 -0.956 -2.794 1.00 1.61 C ATOM 18 C GLU 3 -9.932 0.432 -2.855 1.00 1.61 C ATOM 19 O GLU 3 -10.018 1.202 -1.895 1.00 1.61 O ATOM 20 CB GLU 3 -12.068 -0.837 -3.128 1.00 1.61 C ATOM 21 CG GLU 3 -12.478 -0.411 -4.513 1.00 1.61 C ATOM 22 CD GLU 3 -13.984 -0.200 -4.574 1.00 1.61 C ATOM 23 OE1 GLU 3 -14.688 -0.387 -3.556 1.00 1.61 O ATOM 24 OE2 GLU 3 -14.487 0.199 -5.630 1.00 1.61 O ATOM 25 N THR 4 -9.406 0.813 -4.013 1.00 0.84 N ATOM 26 CA THR 4 -8.847 2.146 -4.272 1.00 0.84 C ATOM 27 C THR 4 -9.765 3.319 -3.916 1.00 0.84 C ATOM 28 O THR 4 -9.305 4.358 -3.422 1.00 0.84 O ATOM 29 CB THR 4 -8.505 2.303 -5.761 1.00 0.84 C ATOM 30 OG1 THR 4 -9.678 1.995 -6.516 1.00 0.84 O ATOM 31 CG2 THR 4 -7.405 1.354 -6.198 1.00 0.84 C ATOM 32 N ARG 5 -11.070 3.149 -4.084 1.00 0.46 N ATOM 33 CA ARG 5 -12.034 4.178 -3.684 1.00 0.46 C ATOM 34 C ARG 5 -12.068 4.352 -2.173 1.00 0.46 C ATOM 35 O ARG 5 -12.070 5.472 -1.668 1.00 0.46 O ATOM 36 CB ARG 5 -13.445 3.823 -4.162 1.00 0.46 C ATOM 37 CG ARG 5 -13.624 3.688 -5.667 1.00 0.46 C ATOM 38 CD ARG 5 -15.097 3.428 -5.923 1.00 0.46 C ATOM 39 NE ARG 5 -15.407 3.182 -7.337 1.00 0.46 N ATOM 40 CZ ARG 5 -16.571 2.754 -7.808 1.00 0.46 C ATOM 41 NH1 ARG 5 -16.778 2.757 -9.091 1.00 0.46 N ATOM 42 NH2 ARG 5 -17.537 2.304 -7.052 1.00 0.46 N ATOM 43 N LYS 6 -12.054 3.243 -1.447 1.00 0.58 N ATOM 44 CA LYS 6 -12.078 3.292 0.016 1.00 0.58 C ATOM 45 C LYS 6 -10.769 3.898 0.487 1.00 0.58 C ATOM 46 O LYS 6 -10.775 4.755 1.354 1.00 0.58 O ATOM 47 CB LYS 6 -12.219 1.888 0.613 1.00 0.58 C ATOM 48 CG LYS 6 -13.453 1.093 0.186 1.00 0.58 C ATOM 49 CD LYS 6 -13.319 -0.334 0.722 1.00 0.58 C ATOM 50 CE LYS 6 -14.349 -1.290 0.146 1.00 0.58 C ATOM 51 NZ LYS 6 -14.126 -2.701 0.612 1.00 0.58 N ATOM 52 N LYS 7 -9.662 3.513 -0.134 1.00 0.96 N ATOM 53 CA LYS 7 -8.339 4.042 0.220 1.00 0.96 C ATOM 54 C LYS 7 -8.277 5.561 0.133 1.00 0.96 C ATOM 55 O LYS 7 -7.724 6.215 1.008 1.00 0.96 O ATOM 56 CB LYS 7 -7.308 3.370 -0.708 1.00 0.96 C ATOM 57 CG LYS 7 -7.111 1.880 -0.374 1.00 0.96 C ATOM 58 CD LYS 7 -6.638 0.902 -1.470 1.00 0.96 C ATOM 59 CE LYS 7 -5.421 1.290 -2.311 1.00 0.96 C ATOM 60 NZ LYS 7 -5.198 0.179 -3.304 1.00 0.96 N ATOM 61 N CYS 8 -8.880 6.116 -0.905 1.00 0.87 N ATOM 62 CA CYS 8 -8.898 7.565 -1.087 1.00 0.87 C ATOM 63 C CYS 8 -9.633 8.259 0.047 1.00 0.87 C ATOM 64 O CYS 8 -9.164 9.243 0.623 1.00 0.87 O ATOM 65 CB CYS 8 -9.628 7.865 -2.398 1.00 0.87 C ATOM 66 SG CYS 8 -9.330 9.522 -3.027 1.00 0.87 S ATOM 67 N THR 9 -10.811 7.740 0.356 1.00 0.60 N ATOM 68 CA THR 9 -11.639 8.314 1.401 1.00 0.60 C ATOM 69 C THR 9 -10.962 8.161 2.756 1.00 0.60 C ATOM 70 O THR 9 -10.964 9.092 3.550 1.00 0.60 O ATOM 71 CB THR 9 -13.018 7.653 1.379 1.00 0.60 C ATOM 72 OG1 THR 9 -13.486 7.663 0.027 1.00 0.60 O ATOM 73 CG2 THR 9 -14.038 8.412 2.202 1.00 0.60 C ATOM 74 N GLU 10 -10.344 7.018 3.019 1.00 0.78 N ATOM 75 CA GLU 10 -9.637 6.816 4.282 1.00 0.78 C ATOM 76 C GLU 10 -8.487 7.798 4.431 1.00 0.78 C ATOM 77 O GLU 10 -8.366 8.414 5.477 1.00 0.78 O ATOM 78 CB GLU 10 -9.077 5.406 4.460 1.00 0.78 C ATOM 79 CG GLU 10 -10.103 4.284 4.594 1.00 0.78 C ATOM 80 CD GLU 10 -11.205 4.590 5.583 1.00 0.78 C ATOM 81 OE1 GLU 10 -10.944 4.909 6.762 1.00 0.78 O ATOM 82 OE2 GLU 10 -12.385 4.500 5.182 1.00 0.78 O ATOM 83 N MET 11 -7.695 8.004 3.388 1.00 0.97 N ATOM 84 CA MET 11 -6.588 8.959 3.449 1.00 0.97 C ATOM 85 C MET 11 -7.095 10.355 3.802 1.00 0.97 C ATOM 86 O MET 11 -6.561 11.022 4.690 1.00 0.97 O ATOM 87 CB MET 11 -5.922 8.973 2.071 1.00 0.97 C ATOM 88 CG MET 11 -4.751 9.924 1.898 1.00 0.97 C ATOM 89 SD MET 11 -4.062 9.798 0.237 1.00 0.97 S ATOM 90 CE MET 11 -5.381 10.422 -0.833 1.00 0.97 C ATOM 91 N LYS 12 -8.171 10.768 3.144 1.00 0.75 N ATOM 92 CA LYS 12 -8.768 12.082 3.396 1.00 0.75 C ATOM 93 C LYS 12 -9.314 12.209 4.816 1.00 0.75 C ATOM 94 O LYS 12 -9.077 13.209 5.480 1.00 0.75 O ATOM 95 CB LYS 12 -9.845 12.392 2.355 1.00 0.75 C ATOM 96 CG LYS 12 -10.229 13.863 2.356 1.00 0.75 C ATOM 97 CD LYS 12 -11.197 14.201 1.244 1.00 0.75 C ATOM 98 CE LYS 12 -11.431 15.699 1.214 1.00 0.75 C ATOM 99 NZ LYS 12 -12.410 16.081 0.159 1.00 0.75 N ATOM 100 N LYS 13 -10.035 11.206 5.295 1.00 0.58 N ATOM 101 CA LYS 13 -10.619 11.265 6.645 1.00 0.58 C ATOM 102 C LYS 13 -9.552 11.214 7.728 1.00 0.58 C ATOM 103 O LYS 13 -9.741 11.753 8.803 1.00 0.58 O ATOM 104 CB LYS 13 -11.562 10.089 6.891 1.00 0.58 C ATOM 105 CG LYS 13 -12.859 10.139 6.091 1.00 0.58 C ATOM 106 CD LYS 13 -13.797 8.987 6.435 1.00 0.58 C ATOM 107 CE LYS 13 -13.221 7.617 6.083 1.00 0.58 C ATOM 108 NZ LYS 13 -14.202 6.509 6.282 1.00 0.58 N ATOM 109 N LYS 14 -8.439 10.547 7.445 1.00 0.40 N ATOM 110 CA LYS 14 -7.321 10.422 8.385 1.00 0.40 C ATOM 111 C LYS 14 -6.305 11.551 8.269 1.00 0.40 C ATOM 112 O LYS 14 -5.270 11.480 8.922 1.00 0.40 O ATOM 113 CB LYS 14 -6.616 9.080 8.162 1.00 0.40 C ATOM 114 CG LYS 14 -7.480 7.872 8.504 1.00 0.40 C ATOM 115 CD LYS 14 -6.819 6.591 8.023 1.00 0.40 C ATOM 116 CE LYS 14 -7.747 5.397 8.188 1.00 0.40 C ATOM 117 NZ LYS 14 -7.964 4.989 9.613 1.00 0.40 N ATOM 118 N PHE 15 -6.605 12.554 7.452 1.00 0.81 N ATOM 119 CA PHE 15 -5.776 13.752 7.257 1.00 0.81 C ATOM 120 C PHE 15 -4.375 13.515 6.682 1.00 0.81 C ATOM 121 O PHE 15 -3.437 14.235 7.008 1.00 0.81 O ATOM 122 CB PHE 15 -5.756 14.612 8.524 1.00 0.81 C ATOM 123 CG PHE 15 -7.135 15.000 8.981 1.00 0.81 C ATOM 124 CD1 PHE 15 -7.719 14.387 10.100 1.00 0.81 C ATOM 125 CD2 PHE 15 -7.875 15.958 8.259 1.00 0.81 C ATOM 126 CE1 PHE 15 -9.035 14.712 10.499 1.00 0.81 C ATOM 127 CE2 PHE 15 -9.197 16.297 8.647 1.00 0.81 C ATOM 128 CZ PHE 15 -9.777 15.673 9.774 1.00 0.81 C ATOM 129 N LYS 16 -4.205 12.509 5.834 1.00 0.78 N ATOM 130 CA LYS 16 -2.873 12.185 5.305 1.00 0.78 C ATOM 131 C LYS 16 -2.690 12.625 3.866 1.00 0.78 C ATOM 132 O LYS 16 -3.659 12.820 3.140 1.00 0.78 O ATOM 133 CB LYS 16 -2.671 10.664 5.313 1.00 0.78 C ATOM 134 CG LYS 16 -2.853 9.952 6.639 1.00 0.78 C ATOM 135 CD LYS 16 -2.563 8.466 6.450 1.00 0.78 C ATOM 136 CE LYS 16 -2.866 7.675 7.714 1.00 0.78 C ATOM 137 NZ LYS 16 -2.534 6.227 7.538 1.00 0.78 N ATOM 138 N ASN 17 -1.432 12.733 3.457 1.00 1.10 N ATOM 139 CA ASN 17 -1.090 13.088 2.081 1.00 1.10 C ATOM 140 C ASN 17 -0.763 11.884 1.206 1.00 1.10 C ATOM 141 O ASN 17 -0.735 11.995 -0.013 1.00 1.10 O ATOM 142 CB ASN 17 0.079 14.074 2.066 1.00 1.10 C ATOM 143 CG ASN 17 -0.324 15.438 2.548 1.00 1.10 C ATOM 144 OD1 ASN 17 -0.046 15.828 3.683 1.00 1.10 O ATOM 145 ND2 ASN 17 -1.017 16.166 1.716 1.00 1.10 N ATOM 146 N CYS 18 -0.535 10.729 1.812 1.00 1.30 N ATOM 147 CA CYS 18 -0.332 9.493 1.070 1.00 1.30 C ATOM 148 C CYS 18 -0.830 8.375 1.972 1.00 1.30 C ATOM 149 O CYS 18 -0.891 8.550 3.193 1.00 1.30 O ATOM 150 CB CYS 18 1.146 9.319 0.717 1.00 1.30 C ATOM 151 SG CYS 18 2.231 9.458 2.151 1.00 1.30 S ATOM 152 N GLU 19 -1.236 7.259 1.386 1.00 1.11 N ATOM 153 CA GLU 19 -1.767 6.126 2.137 1.00 1.11 C ATOM 154 C GLU 19 -1.430 4.800 1.446 1.00 1.11 C ATOM 155 O GLU 19 -1.764 4.588 0.276 1.00 1.11 O ATOM 156 CB GLU 19 -3.287 6.305 2.264 1.00 1.11 C ATOM 157 CG GLU 19 -4.029 5.266 3.087 1.00 1.11 C ATOM 158 CD GLU 19 -3.695 5.325 4.567 1.00 1.11 C ATOM 159 OE1 GLU 19 -4.520 5.797 5.379 1.00 1.11 O ATOM 160 OE2 GLU 19 -2.584 4.886 4.945 1.00 1.11 O ATOM 161 N VAL 20 -0.743 3.929 2.175 1.00 1.59 N ATOM 162 CA VAL 20 -0.254 2.640 1.673 1.00 1.59 C ATOM 163 C VAL 20 -1.244 1.559 2.086 1.00 1.59 C ATOM 164 O VAL 20 -1.503 1.393 3.278 1.00 1.59 O ATOM 165 CB VAL 20 1.130 2.294 2.299 1.00 1.59 C ATOM 166 CG1 VAL 20 1.683 0.972 1.748 1.00 1.59 C ATOM 167 CG2 VAL 20 2.146 3.428 2.065 1.00 1.59 C ATOM 168 N ARG 21 -1.826 0.824 1.146 1.00 1.39 N ATOM 169 CA ARG 21 -2.820 -0.202 1.495 1.00 1.39 C ATOM 170 C ARG 21 -2.740 -1.372 0.534 1.00 1.39 C ATOM 171 O ARG 21 -2.379 -1.208 -0.620 1.00 1.39 O ATOM 172 CB ARG 21 -4.241 0.378 1.459 1.00 1.39 C ATOM 173 CG ARG 21 -4.542 1.507 2.454 1.00 1.39 C ATOM 174 CD ARG 21 -4.573 1.121 3.919 1.00 1.39 C ATOM 175 NE ARG 21 -5.713 0.286 4.310 1.00 1.39 N ATOM 176 CZ ARG 21 -5.677 -0.752 5.135 1.00 1.39 C ATOM 177 NH1 ARG 21 -6.807 -1.250 5.531 1.00 1.39 N ATOM 178 NH2 ARG 21 -4.575 -1.304 5.577 1.00 1.39 N ATOM 179 N CYS 22 -3.154 -2.535 1.011 1.00 1.83 N ATOM 180 CA CYS 22 -3.323 -3.703 0.157 1.00 1.83 C ATOM 181 C CYS 22 -4.626 -3.512 -0.620 1.00 1.83 C ATOM 182 O CYS 22 -5.686 -3.324 -0.000 1.00 1.83 O ATOM 183 CB CYS 22 -3.377 -5.006 0.951 1.00 1.83 C ATOM 184 SG CYS 22 -3.339 -6.437 -0.155 1.00 1.83 S ATOM 185 N ASP 23 -4.552 -3.528 -1.941 1.00 1.89 N ATOM 186 CA ASP 23 -5.721 -3.409 -2.803 1.00 1.89 C ATOM 187 C ASP 23 -6.419 -4.756 -2.817 1.00 1.89 C ATOM 188 O ASP 23 -5.819 -5.783 -3.103 1.00 1.89 O ATOM 189 CB ASP 23 -5.351 -3.048 -4.227 1.00 1.89 C ATOM 190 CG ASP 23 -6.577 -2.739 -5.029 1.00 1.89 C ATOM 191 OD1 ASP 23 -7.422 -1.931 -4.579 1.00 1.89 O ATOM 192 OD2 ASP 23 -6.796 -3.437 -6.022 1.00 1.89 O ATOM 193 N GLU 24 -7.697 -4.755 -2.488 1.00 1.67 N ATOM 194 CA GLU 24 -8.486 -5.981 -2.459 1.00 1.67 C ATOM 195 C GLU 24 -8.787 -6.489 -3.862 1.00 1.67 C ATOM 196 O GLU 24 -9.005 -7.676 -4.061 1.00 1.67 O ATOM 197 CB GLU 24 -9.766 -5.541 -1.740 1.00 1.67 C ATOM 198 CG GLU 24 -10.797 -6.566 -1.365 1.00 1.67 C ATOM 199 CD GLU 24 -11.935 -5.928 -0.566 1.00 1.67 C ATOM 200 OE1 GLU 24 -12.032 -4.678 -0.452 1.00 1.67 O ATOM 201 OE2 GLU 24 -12.732 -6.696 0.014 1.00 1.67 O ATOM 202 N SER 25 -8.791 -5.592 -4.839 1.00 1.42 N ATOM 203 CA SER 25 -9.159 -5.989 -6.196 1.00 1.42 C ATOM 204 C SER 25 -8.008 -6.591 -6.997 1.00 1.42 C ATOM 205 O SER 25 -8.242 -7.359 -7.922 1.00 1.42 O ATOM 206 CB SER 25 -9.848 -4.856 -6.962 1.00 1.42 C ATOM 207 OG SER 25 -9.020 -3.757 -7.293 1.00 1.42 O ATOM 208 N ASN 26 -6.776 -6.258 -6.628 1.00 0.90 N ATOM 209 CA ASN 26 -5.589 -6.752 -7.338 1.00 0.90 C ATOM 210 C ASN 26 -4.664 -7.610 -6.478 1.00 0.90 C ATOM 211 O ASN 26 -3.649 -8.101 -6.959 1.00 0.90 O ATOM 212 CB ASN 26 -4.776 -5.565 -7.872 1.00 0.90 C ATOM 213 CG ASN 26 -5.432 -4.878 -9.040 1.00 0.90 C ATOM 214 OD1 ASN 26 -5.305 -5.313 -10.179 1.00 0.90 O ATOM 215 ND2 ASN 26 -6.097 -3.787 -8.792 1.00 0.90 N ATOM 216 N HIS 27 -4.989 -7.738 -5.196 1.00 0.85 N ATOM 217 CA HIS 27 -4.184 -8.460 -4.194 1.00 0.85 C ATOM 218 C HIS 27 -2.748 -7.945 -4.046 1.00 0.85 C ATOM 219 O HIS 27 -1.863 -8.656 -3.575 1.00 0.85 O ATOM 220 CB HIS 27 -4.268 -9.969 -4.438 1.00 0.85 C ATOM 221 CG HIS 27 -5.675 -10.453 -4.614 1.00 0.85 C ATOM 222 ND1 HIS 27 -6.469 -10.829 -3.553 1.00 0.85 N ATOM 223 CD2 HIS 27 -6.431 -10.572 -5.742 1.00 0.85 C ATOM 224 CE1 HIS 27 -7.673 -11.187 -4.102 1.00 0.85 C ATOM 225 NE2 HIS 27 -7.678 -11.049 -5.447 1.00 0.85 N ATOM 226 N CYS 28 -2.521 -6.696 -4.430 1.00 0.56 N ATOM 227 CA CYS 28 -1.189 -6.096 -4.418 1.00 0.56 C ATOM 228 C CYS 28 -1.175 -4.847 -3.545 1.00 0.56 C ATOM 229 O CYS 28 -2.211 -4.233 -3.302 1.00 0.56 O ATOM 230 CB CYS 28 -0.754 -5.722 -5.839 1.00 0.56 C ATOM 231 SG CYS 28 -0.637 -7.131 -6.968 1.00 0.56 S ATOM 232 N VAL 29 -0.009 -4.478 -3.041 1.00 0.91 N ATOM 233 CA VAL 29 0.123 -3.276 -2.223 1.00 0.91 C ATOM 234 C VAL 29 0.268 -2.119 -3.196 1.00 0.91 C ATOM 235 O VAL 29 1.048 -2.189 -4.132 1.00 0.91 O ATOM 236 CB VAL 29 1.336 -3.363 -1.257 1.00 0.91 C ATOM 237 CG1 VAL 29 1.515 -2.066 -0.450 1.00 0.91 C ATOM 238 CG2 VAL 29 1.136 -4.527 -0.283 1.00 0.91 C ATOM 239 N GLU 30 -0.494 -1.067 -2.956 1.00 0.99 N ATOM 240 CA GLU 30 -0.517 0.111 -3.809 1.00 0.99 C ATOM 241 C GLU 30 -0.546 1.324 -2.877 1.00 0.99 C ATOM 242 O GLU 30 -0.989 1.219 -1.715 1.00 0.99 O ATOM 243 CB GLU 30 -1.816 0.127 -4.615 1.00 0.99 C ATOM 244 CG GLU 30 -1.979 -1.007 -5.618 1.00 0.99 C ATOM 245 CD GLU 30 -3.262 -0.881 -6.423 1.00 0.99 C ATOM 246 OE1 GLU 30 -4.195 -0.171 -5.967 1.00 0.99 O ATOM 247 OE2 GLU 30 -3.355 -1.493 -7.513 1.00 0.99 O ATOM 248 N VAL 31 -0.137 2.489 -3.362 1.00 1.43 N ATOM 249 CA VAL 31 -0.097 3.711 -2.543 1.00 1.43 C ATOM 250 C VAL 31 -0.915 4.819 -3.196 1.00 1.43 C ATOM 251 O VAL 31 -0.660 5.170 -4.335 1.00 1.43 O ATOM 252 CB VAL 31 1.360 4.227 -2.358 1.00 1.43 C ATOM 253 CG1 VAL 31 1.414 5.414 -1.376 1.00 1.43 C ATOM 254 CG2 VAL 31 2.279 3.097 -1.878 1.00 1.43 C ATOM 255 N ARG 32 -1.902 5.382 -2.515 1.00 1.14 N ATOM 256 CA ARG 32 -2.723 6.452 -3.095 1.00 1.14 C ATOM 257 C ARG 32 -2.251 7.745 -2.455 1.00 1.14 C ATOM 258 O ARG 32 -1.928 7.727 -1.275 1.00 1.14 O ATOM 259 CB ARG 32 -4.211 6.161 -2.863 1.00 1.14 C ATOM 260 CG ARG 32 -5.156 7.052 -3.667 1.00 1.14 C ATOM 261 CD ARG 32 -6.443 6.318 -4.007 1.00 1.14 C ATOM 262 NE ARG 32 -7.376 7.126 -4.805 1.00 1.14 N ATOM 263 CZ ARG 32 -7.390 7.263 -6.124 1.00 1.14 C ATOM 264 NH1 ARG 32 -8.444 7.791 -6.672 1.00 1.14 N ATOM 265 NH2 ARG 32 -6.407 6.898 -6.900 1.00 1.14 N ATOM 266 N CYS 33 -2.173 8.837 -3.201 1.00 1.48 N ATOM 267 CA CYS 33 -1.677 10.110 -2.668 1.00 1.48 C ATOM 268 C CYS 33 -2.626 11.266 -2.981 1.00 1.48 C ATOM 269 O CYS 33 -3.477 11.145 -3.852 1.00 1.48 O ATOM 270 CB CYS 33 -0.281 10.392 -3.224 1.00 1.48 C ATOM 271 SG CYS 33 0.908 9.064 -2.890 1.00 1.48 S ATOM 272 N SER 34 -2.490 12.381 -2.273 1.00 1.67 N ATOM 273 CA SER 34 -3.381 13.541 -2.418 1.00 1.67 C ATOM 274 C SER 34 -3.089 14.416 -3.633 1.00 1.67 C ATOM 275 O SER 34 -3.783 15.399 -3.881 1.00 1.67 O ATOM 276 CB SER 34 -3.264 14.403 -1.159 1.00 1.67 C ATOM 277 OG SER 34 -1.906 14.695 -0.857 1.00 1.67 O ATOM 278 N ASP 35 -2.036 14.093 -4.365 1.00 2.03 N ATOM 279 CA ASP 35 -1.591 14.942 -5.474 1.00 2.03 C ATOM 280 C ASP 35 -2.642 15.055 -6.569 1.00 2.03 C ATOM 281 O ASP 35 -3.256 14.059 -6.939 1.00 2.03 O ATOM 282 CB ASP 35 -0.328 14.359 -6.103 1.00 2.03 C ATOM 283 CG ASP 35 0.786 14.178 -5.102 1.00 2.03 C ATOM 284 OD1 ASP 35 1.251 15.164 -4.485 1.00 2.03 O ATOM 285 OD2 ASP 35 1.198 13.018 -4.899 1.00 2.03 O ATOM 286 N THR 36 -2.802 16.253 -7.116 1.00 2.01 N ATOM 287 CA THR 36 -3.731 16.578 -8.207 1.00 2.01 C ATOM 288 C THR 36 -5.191 16.185 -7.964 1.00 2.01 C ATOM 289 O THR 36 -5.929 16.944 -7.342 1.00 2.01 O ATOM 290 CB THR 36 -3.208 16.091 -9.593 1.00 2.01 C ATOM 291 OG1 THR 36 -3.123 14.662 -9.646 1.00 2.01 O ATOM 292 CG2 THR 36 -1.812 16.606 -9.858 1.00 2.01 C ATOM 293 N LYS 37 -5.615 15.033 -8.467 1.00 2.14 N ATOM 294 CA LYS 37 -6.984 14.523 -8.338 1.00 2.14 C ATOM 295 C LYS 37 -6.882 13.071 -7.880 1.00 2.14 C ATOM 296 O LYS 37 -7.600 12.194 -8.359 1.00 2.14 O ATOM 297 CB LYS 37 -7.742 14.650 -9.667 1.00 2.14 C ATOM 298 CG LYS 37 -7.794 16.086 -10.182 1.00 2.14 C ATOM 299 CD LYS 37 -8.677 16.245 -11.398 1.00 2.14 C ATOM 300 CE LYS 37 -8.549 17.670 -11.914 1.00 2.14 C ATOM 301 NZ LYS 37 -9.522 17.963 -12.998 1.00 2.14 N ATOM 302 N TYR 38 -5.905 12.876 -7.001 1.00 1.83 N ATOM 303 CA TYR 38 -5.512 11.612 -6.366 1.00 1.83 C ATOM 304 C TYR 38 -4.739 10.628 -7.247 1.00 1.83 C ATOM 305 O TYR 38 -5.312 9.868 -8.036 1.00 1.83 O ATOM 306 CB TYR 38 -6.681 10.930 -5.650 1.00 1.83 C ATOM 307 CG TYR 38 -7.448 11.874 -4.751 1.00 1.83 C ATOM 308 CD1 TYR 38 -8.713 12.366 -5.133 1.00 1.83 C ATOM 309 CD2 TYR 38 -6.910 12.286 -3.517 1.00 1.83 C ATOM 310 CE1 TYR 38 -9.446 13.227 -4.273 1.00 1.83 C ATOM 311 CE2 TYR 38 -7.643 13.137 -2.647 1.00 1.83 C ATOM 312 CZ TYR 38 -8.910 13.588 -3.034 1.00 1.83 C ATOM 313 OH TYR 38 -9.631 14.392 -2.186 1.00 1.83 O ATOM 314 N THR 39 -3.420 10.660 -7.118 1.00 1.58 N ATOM 315 CA THR 39 -2.514 9.759 -7.834 1.00 1.58 C ATOM 316 C THR 39 -2.467 8.392 -7.145 1.00 1.58 C ATOM 317 O THR 39 -2.923 8.251 -6.006 1.00 1.58 O ATOM 318 CB THR 39 -1.102 10.381 -7.848 1.00 1.58 C ATOM 319 OG1 THR 39 -0.815 10.891 -6.545 1.00 1.58 O ATOM 320 CG2 THR 39 -1.017 11.566 -8.786 1.00 1.58 C ATOM 321 N LEU 40 -1.951 7.379 -7.830 1.00 0.83 N ATOM 322 CA LEU 40 -1.907 6.010 -7.310 1.00 0.83 C ATOM 323 C LEU 40 -0.683 5.284 -7.861 1.00 0.83 C ATOM 324 O LEU 40 -0.550 5.119 -9.078 1.00 0.83 O ATOM 325 CB LEU 40 -3.178 5.257 -7.726 1.00 0.83 C ATOM 326 CG LEU 40 -3.369 3.787 -7.309 1.00 0.83 C ATOM 327 CD1 LEU 40 -3.525 3.585 -5.807 1.00 0.83 C ATOM 328 CD2 LEU 40 -4.608 3.237 -8.008 1.00 0.83 C ATOM 329 N CYS 41 0.196 4.864 -6.969 1.00 0.60 N ATOM 330 CA CYS 41 1.364 4.061 -7.308 1.00 0.60 C ATOM 331 C CYS 41 0.927 2.603 -7.257 1.00 0.60 C ATOM 332 O CYS 41 0.411 2.202 -6.195 1.00 0.60 O ATOM 333 OXT CYS 41 1.048 1.893 -8.282 1.00 0.60 O ATOM 334 CB CYS 41 2.460 4.311 -6.269 1.00 0.60 C ATOM 335 SG CYS 41 2.812 6.076 -6.002 1.00 0.60 S TER 336 CYS A 41 END