####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS023_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS023_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 4.48 18.85 LONGEST_CONTINUOUS_SEGMENT: 20 15 - 34 4.77 20.68 LONGEST_CONTINUOUS_SEGMENT: 20 16 - 35 4.90 21.03 LONGEST_CONTINUOUS_SEGMENT: 20 17 - 36 4.87 21.19 LCS_AVERAGE: 45.93 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.88 21.22 LCS_AVERAGE: 28.44 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 2 - 15 0.90 22.69 LONGEST_CONTINUOUS_SEGMENT: 14 3 - 16 0.99 22.28 LCS_AVERAGE: 21.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 6 10 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT Q 2 Q 2 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT E 3 E 3 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT T 4 T 4 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT R 5 R 5 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT K 6 K 6 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT K 7 K 7 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT C 8 C 8 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT T 9 T 9 14 17 20 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT E 10 E 10 14 17 20 7 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT M 11 M 11 14 17 20 7 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT K 12 K 12 14 17 20 7 12 15 15 16 16 16 18 18 21 22 24 24 25 26 27 27 27 27 28 LCS_GDT K 13 K 13 14 17 20 7 12 15 15 16 16 16 18 18 21 22 24 24 25 26 27 27 27 27 29 LCS_GDT K 14 K 14 14 17 20 6 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT F 15 F 15 14 17 20 4 9 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT K 16 K 16 14 17 20 4 9 15 15 16 16 16 18 18 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT N 17 N 17 5 17 20 4 5 5 7 11 15 16 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT C 18 C 18 5 10 20 4 5 6 7 9 11 14 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT E 19 E 19 5 10 20 3 5 6 6 9 11 11 13 16 16 18 19 23 25 26 27 27 27 28 29 LCS_GDT V 20 V 20 5 10 20 4 4 7 7 9 11 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT R 21 R 21 6 10 20 4 4 7 7 9 11 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT C 22 C 22 6 10 20 4 4 7 7 9 11 11 13 14 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT D 23 D 23 6 10 20 4 4 7 7 9 11 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT E 24 E 24 6 10 20 3 4 7 7 9 11 11 12 13 15 18 18 20 21 21 23 26 27 28 29 LCS_GDT S 25 S 25 6 10 20 3 4 7 7 9 11 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT N 26 N 26 6 9 20 3 4 7 7 9 11 11 12 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT H 27 H 27 4 6 20 3 4 5 6 7 8 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT C 28 C 28 8 8 20 4 7 8 8 8 8 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT V 29 V 29 8 8 20 4 7 8 8 8 8 8 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT E 30 E 30 8 8 20 4 7 8 8 8 8 11 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT V 31 V 31 8 8 20 4 7 8 8 8 8 10 13 16 16 18 18 20 21 21 23 26 27 28 29 LCS_GDT R 32 R 32 8 8 20 4 7 8 8 8 8 11 13 16 16 18 18 20 24 26 27 27 27 28 29 LCS_GDT C 33 C 33 8 8 20 3 7 8 8 8 8 8 13 16 20 22 24 24 25 26 27 27 27 28 29 LCS_GDT S 34 S 34 8 8 20 3 7 8 8 11 12 15 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT D 35 D 35 8 8 20 3 6 8 8 11 12 15 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT T 36 T 36 4 5 20 3 3 6 8 11 12 15 18 19 21 22 24 24 25 26 27 27 27 28 29 LCS_GDT K 37 K 37 4 5 15 3 3 5 8 11 11 15 18 19 20 22 24 24 25 26 27 27 27 28 29 LCS_GDT Y 38 Y 38 4 5 10 3 4 5 6 7 9 11 15 16 20 22 24 24 25 26 27 27 27 28 29 LCS_GDT T 39 T 39 4 5 10 3 4 5 6 7 9 11 11 12 15 17 20 23 25 26 27 27 27 28 29 LCS_GDT L 40 L 40 4 5 10 3 4 5 6 7 9 11 11 12 14 15 15 16 19 21 23 26 27 28 29 LCS_GDT C 41 C 41 4 5 7 3 4 5 5 5 7 11 11 12 14 15 15 16 17 19 23 26 27 28 29 LCS_AVERAGE LCS_A: 31.95 ( 21.48 28.44 45.93 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 15 15 16 16 16 18 19 21 22 24 24 25 26 27 27 27 28 29 GDT PERCENT_AT 19.51 29.27 36.59 36.59 39.02 39.02 39.02 43.90 46.34 51.22 53.66 58.54 58.54 60.98 63.41 65.85 65.85 65.85 68.29 70.73 GDT RMS_LOCAL 0.31 0.63 1.01 1.01 1.37 1.37 1.37 2.31 2.92 3.35 3.44 3.80 3.80 4.12 4.48 4.80 4.80 4.80 6.60 6.89 GDT RMS_ALL_AT 23.16 23.15 22.27 22.27 21.93 21.93 21.93 20.68 17.89 18.24 18.08 17.64 17.64 17.39 17.01 16.70 16.70 16.70 18.45 17.88 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.288 0 0.363 0.797 3.717 29.545 32.727 2.973 LGA Q 2 Q 2 1.822 0 0.243 0.647 5.364 61.818 32.525 5.265 LGA E 3 E 3 1.769 0 0.062 1.553 7.154 50.909 28.081 6.758 LGA T 4 T 4 1.746 0 0.043 1.036 3.434 50.909 42.857 3.434 LGA R 5 R 5 1.013 0 0.068 1.345 5.476 73.636 50.083 5.476 LGA K 6 K 6 0.519 0 0.037 0.643 3.256 86.364 60.404 2.454 LGA K 7 K 7 1.214 0 0.070 0.963 6.884 69.545 37.980 6.884 LGA C 8 C 8 1.900 0 0.056 0.091 2.681 54.545 47.273 2.681 LGA T 9 T 9 1.489 0 0.041 0.094 1.804 61.818 61.299 1.237 LGA E 10 E 10 0.825 0 0.042 1.037 5.350 77.727 50.101 5.350 LGA M 11 M 11 1.060 0 0.079 1.073 4.823 69.545 52.727 4.823 LGA K 12 K 12 2.767 0 0.069 0.921 3.306 27.727 34.141 1.871 LGA K 13 K 13 2.875 0 0.050 0.941 3.318 25.000 27.879 1.664 LGA K 14 K 14 2.027 0 0.083 0.634 3.908 38.182 36.566 3.908 LGA F 15 F 15 1.887 0 0.434 0.658 4.316 47.727 29.421 4.077 LGA K 16 K 16 1.442 0 0.091 0.845 5.520 65.909 34.949 4.048 LGA N 17 N 17 3.815 0 0.050 0.773 7.742 16.818 8.636 7.742 LGA C 18 C 18 5.516 0 0.081 0.127 6.887 2.727 4.848 3.389 LGA E 19 E 19 10.693 0 0.356 1.299 16.746 0.000 0.000 15.788 LGA V 20 V 20 16.004 0 0.230 1.163 17.892 0.000 0.000 16.694 LGA R 21 R 21 22.165 0 0.057 1.555 30.071 0.000 0.000 29.886 LGA C 22 C 22 26.561 0 0.070 0.864 28.893 0.000 0.000 25.784 LGA D 23 D 23 33.493 0 0.117 0.814 35.012 0.000 0.000 34.432 LGA E 24 E 24 38.681 0 0.679 1.165 42.998 0.000 0.000 36.172 LGA S 25 S 25 44.015 0 0.404 0.396 47.197 0.000 0.000 43.289 LGA N 26 N 26 43.905 0 0.426 1.031 45.904 0.000 0.000 43.167 LGA H 27 H 27 42.424 0 0.092 1.168 46.667 0.000 0.000 46.119 LGA C 28 C 28 41.773 0 0.582 0.596 45.883 0.000 0.000 45.883 LGA V 29 V 29 35.118 0 0.168 0.982 37.440 0.000 0.000 32.182 LGA E 30 E 30 29.924 0 0.032 0.860 31.914 0.000 0.000 31.676 LGA V 31 V 31 23.677 0 0.052 0.092 25.870 0.000 0.000 21.492 LGA R 32 R 32 19.026 0 0.236 0.692 25.301 0.000 0.000 25.301 LGA C 33 C 33 13.746 0 0.509 0.595 16.879 0.000 0.000 16.879 LGA S 34 S 34 12.170 0 0.548 0.976 12.994 0.000 0.000 9.792 LGA D 35 D 35 13.823 0 0.073 1.007 15.918 0.000 0.000 15.918 LGA T 36 T 36 11.089 0 0.581 0.613 11.854 0.000 0.000 10.757 LGA K 37 K 37 11.434 0 0.399 1.308 15.232 0.000 0.000 12.122 LGA Y 38 Y 38 15.642 0 0.080 1.253 17.361 0.000 0.000 17.361 LGA T 39 T 39 19.670 0 0.050 1.137 22.777 0.000 0.000 21.197 LGA L 40 L 40 22.844 0 0.185 0.929 24.785 0.000 0.000 21.438 LGA C 41 C 41 29.184 0 0.459 1.140 32.381 0.000 0.000 32.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 12.713 12.521 13.267 22.206 16.402 7.805 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 18 2.31 43.902 40.560 0.748 LGA_LOCAL RMSD: 2.307 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.677 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 12.713 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.753844 * X + -0.198765 * Y + -0.626268 * Z + -23.330736 Y_new = -0.448224 * X + -0.541366 * Y + 0.711349 * Z + 52.089157 Z_new = -0.480432 * X + 0.816955 * Y + 0.319015 * Z + -1.013689 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.605165 0.501147 1.198513 [DEG: -149.2650 28.7136 68.6697 ] ZXZ: -2.419716 1.246107 -0.531606 [DEG: -138.6395 71.3967 -30.4588 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS023_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS023_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 18 2.31 40.560 12.71 REMARK ---------------------------------------------------------- MOLECULE T0955TS023_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 -1.202 -13.060 -1.343 1.00 4.74 ATOM 2 CA SER 1 -1.802 -13.637 -0.120 1.00 4.74 ATOM 3 CB SER 1 -1.405 -15.119 -0.010 1.00 4.74 ATOM 4 OG SER 1 -2.000 -15.714 1.132 1.00 4.74 ATOM 5 C SER 1 -1.319 -12.886 1.083 1.00 4.74 ATOM 6 O SER 1 -1.529 -11.679 1.190 1.00 4.74 ATOM 7 N GLN 2 -0.678 -13.588 2.034 1.00 4.11 ATOM 8 CA GLN 2 -0.168 -12.938 3.206 1.00 4.11 ATOM 9 CB GLN 2 0.459 -13.905 4.229 1.00 4.11 ATOM 10 CG GLN 2 1.720 -14.604 3.711 1.00 4.11 ATOM 11 CD GLN 2 2.412 -15.278 4.888 1.00 4.11 ATOM 12 OE1 GLN 2 1.946 -15.215 6.024 1.00 4.11 ATOM 13 NE2 GLN 2 3.570 -15.934 4.607 1.00 4.11 ATOM 14 C GLN 2 0.935 -12.029 2.770 1.00 4.11 ATOM 15 O GLN 2 1.087 -10.915 3.268 1.00 4.11 ATOM 16 N GLU 3 1.728 -12.501 1.794 1.00 4.28 ATOM 17 CA GLU 3 2.893 -11.808 1.332 1.00 4.28 ATOM 18 CB GLU 3 3.638 -12.575 0.227 1.00 4.28 ATOM 19 CG GLU 3 4.945 -11.897 -0.177 1.00 4.28 ATOM 20 CD GLU 3 5.850 -11.939 1.044 1.00 4.28 ATOM 21 OE1 GLU 3 6.459 -13.014 1.291 1.00 4.28 ATOM 22 OE2 GLU 3 5.936 -10.901 1.753 1.00 4.28 ATOM 23 C GLU 3 2.501 -10.484 0.773 1.00 4.28 ATOM 24 O GLU 3 3.195 -9.495 0.986 1.00 4.28 ATOM 25 N THR 4 1.376 -10.421 0.042 1.00 4.25 ATOM 26 CA THR 4 0.977 -9.178 -0.548 1.00 4.25 ATOM 27 CB THR 4 -0.240 -9.312 -1.407 1.00 4.25 ATOM 28 OG1 THR 4 -1.342 -9.762 -0.630 1.00 4.25 ATOM 29 CG2 THR 4 0.075 -10.319 -2.524 1.00 4.25 ATOM 30 C THR 4 0.661 -8.203 0.539 1.00 4.25 ATOM 31 O THR 4 0.995 -7.023 0.443 1.00 4.25 ATOM 32 N ARG 5 0.019 -8.681 1.620 1.00 4.01 ATOM 33 CA ARG 5 -0.400 -7.809 2.678 1.00 4.01 ATOM 34 CB ARG 5 -1.023 -8.563 3.863 1.00 4.01 ATOM 35 CG ARG 5 -2.302 -9.337 3.543 1.00 4.01 ATOM 36 CD ARG 5 -2.781 -10.185 4.728 1.00 4.01 ATOM 37 NE ARG 5 -3.381 -9.272 5.742 1.00 4.01 ATOM 38 CZ ARG 5 -4.732 -9.079 5.778 1.00 4.01 ATOM 39 NH1 ARG 5 -5.544 -9.789 4.940 1.00 4.01 ATOM 40 NH2 ARG 5 -5.274 -8.186 6.657 1.00 4.01 ATOM 41 C ARG 5 0.793 -7.113 3.251 1.00 4.01 ATOM 42 O ARG 5 0.766 -5.903 3.467 1.00 4.01 ATOM 43 N LYS 6 1.877 -7.866 3.510 1.00 3.91 ATOM 44 CA LYS 6 3.033 -7.306 4.147 1.00 3.91 ATOM 45 CB LYS 6 4.106 -8.364 4.475 1.00 3.91 ATOM 46 CG LYS 6 5.145 -7.893 5.498 1.00 3.91 ATOM 47 CD LYS 6 5.964 -6.678 5.060 1.00 3.91 ATOM 48 CE LYS 6 7.143 -7.035 4.151 1.00 3.91 ATOM 49 NZ LYS 6 8.101 -7.902 4.872 1.00 3.91 ATOM 50 C LYS 6 3.651 -6.262 3.267 1.00 3.91 ATOM 51 O LYS 6 4.051 -5.204 3.748 1.00 3.91 ATOM 52 N LYS 7 3.744 -6.533 1.950 1.00 3.83 ATOM 53 CA LYS 7 4.368 -5.616 1.040 1.00 3.83 ATOM 54 CB LYS 7 4.461 -6.169 -0.391 1.00 3.83 ATOM 55 CG LYS 7 5.217 -7.493 -0.463 1.00 3.83 ATOM 56 CD LYS 7 6.612 -7.422 0.160 1.00 3.83 ATOM 57 CE LYS 7 7.298 -8.782 0.293 1.00 3.83 ATOM 58 NZ LYS 7 8.590 -8.625 0.995 1.00 3.83 ATOM 59 C LYS 7 3.571 -4.355 0.965 1.00 3.83 ATOM 60 O LYS 7 4.123 -3.256 1.014 1.00 3.83 ATOM 61 N CYS 8 2.239 -4.484 0.866 1.00 3.70 ATOM 62 CA CYS 8 1.396 -3.337 0.711 1.00 3.70 ATOM 63 CB CYS 8 -0.088 -3.702 0.558 1.00 3.70 ATOM 64 SG CYS 8 -1.148 -2.237 0.370 1.00 3.70 ATOM 65 C CYS 8 1.520 -2.485 1.928 1.00 3.70 ATOM 66 O CYS 8 1.534 -1.258 1.841 1.00 3.70 ATOM 67 N THR 9 1.634 -3.128 3.103 1.00 3.86 ATOM 68 CA THR 9 1.681 -2.420 4.345 1.00 3.86 ATOM 69 CB THR 9 1.843 -3.343 5.520 1.00 3.86 ATOM 70 OG1 THR 9 0.783 -4.288 5.558 1.00 3.86 ATOM 71 CG2 THR 9 1.846 -2.503 6.809 1.00 3.86 ATOM 72 C THR 9 2.853 -1.490 4.345 1.00 3.86 ATOM 73 O THR 9 2.727 -0.335 4.747 1.00 3.86 ATOM 74 N GLU 10 4.029 -1.948 3.883 1.00 3.56 ATOM 75 CA GLU 10 5.190 -1.112 3.971 1.00 3.56 ATOM 76 CB GLU 10 6.464 -1.796 3.447 1.00 3.56 ATOM 77 CG GLU 10 6.940 -2.928 4.354 1.00 3.56 ATOM 78 CD GLU 10 7.417 -2.302 5.656 1.00 3.56 ATOM 79 OE1 GLU 10 7.459 -1.046 5.729 1.00 3.56 ATOM 80 OE2 GLU 10 7.747 -3.074 6.597 1.00 3.56 ATOM 81 C GLU 10 4.996 0.130 3.167 1.00 3.56 ATOM 82 O GLU 10 5.279 1.229 3.641 1.00 3.56 ATOM 83 N MET 11 4.494 -0.007 1.927 1.00 4.20 ATOM 84 CA MET 11 4.359 1.132 1.067 1.00 4.20 ATOM 85 CB MET 11 3.932 0.758 -0.360 1.00 4.20 ATOM 86 CG MET 11 4.111 1.906 -1.356 1.00 4.20 ATOM 87 SD MET 11 3.916 1.436 -3.102 1.00 4.20 ATOM 88 CE MET 11 4.658 2.963 -3.750 1.00 4.20 ATOM 89 C MET 11 3.347 2.070 1.640 1.00 4.20 ATOM 90 O MET 11 3.530 3.286 1.636 1.00 4.20 ATOM 91 N LYS 12 2.253 1.510 2.180 1.00 3.59 ATOM 92 CA LYS 12 1.198 2.304 2.730 1.00 3.59 ATOM 93 CB LYS 12 0.092 1.430 3.340 1.00 3.59 ATOM 94 CG LYS 12 -1.070 2.210 3.954 1.00 3.59 ATOM 95 CD LYS 12 -2.234 1.320 4.400 1.00 3.59 ATOM 96 CE LYS 12 -1.881 0.362 5.544 1.00 3.59 ATOM 97 NZ LYS 12 -1.483 1.129 6.745 1.00 3.59 ATOM 98 C LYS 12 1.773 3.110 3.845 1.00 3.59 ATOM 99 O LYS 12 1.442 4.281 4.014 1.00 3.59 ATOM 100 N LYS 13 2.664 2.480 4.627 1.00 3.85 ATOM 101 CA LYS 13 3.262 3.075 5.781 1.00 3.85 ATOM 102 CB LYS 13 4.143 2.078 6.554 1.00 3.85 ATOM 103 CG LYS 13 4.611 2.558 7.929 1.00 3.85 ATOM 104 CD LYS 13 5.029 1.402 8.842 1.00 3.85 ATOM 105 CE LYS 13 5.650 0.225 8.088 1.00 3.85 ATOM 106 NZ LYS 13 5.793 -0.940 8.993 1.00 3.85 ATOM 107 C LYS 13 4.079 4.260 5.378 1.00 3.85 ATOM 108 O LYS 13 4.083 5.268 6.082 1.00 3.85 ATOM 109 N LYS 14 4.802 4.195 4.244 1.00 3.92 ATOM 110 CA LYS 14 5.600 5.340 3.911 1.00 3.92 ATOM 111 CB LYS 14 6.479 5.156 2.659 1.00 3.92 ATOM 112 CG LYS 14 7.725 4.301 2.901 1.00 3.92 ATOM 113 CD LYS 14 8.536 4.017 1.632 1.00 3.92 ATOM 114 CE LYS 14 9.849 3.271 1.894 1.00 3.92 ATOM 115 NZ LYS 14 10.577 3.053 0.622 1.00 3.92 ATOM 116 C LYS 14 4.708 6.521 3.673 1.00 3.92 ATOM 117 O LYS 14 4.956 7.609 4.193 1.00 3.92 ATOM 118 N PHE 15 3.626 6.339 2.896 1.00 3.35 ATOM 119 CA PHE 15 2.749 7.433 2.587 1.00 3.35 ATOM 120 CB PHE 15 1.738 7.105 1.476 1.00 3.35 ATOM 121 CG PHE 15 2.522 7.058 0.207 1.00 3.35 ATOM 122 CD1 PHE 15 2.886 8.232 -0.415 1.00 3.35 ATOM 123 CD2 PHE 15 2.898 5.858 -0.355 1.00 3.35 ATOM 124 CE1 PHE 15 3.610 8.212 -1.584 1.00 3.35 ATOM 125 CE2 PHE 15 3.622 5.833 -1.524 1.00 3.35 ATOM 126 CZ PHE 15 3.981 7.011 -2.139 1.00 3.35 ATOM 127 C PHE 15 2.036 7.891 3.819 1.00 3.35 ATOM 128 O PHE 15 1.814 9.087 4.010 1.00 3.35 ATOM 129 N LYS 16 1.680 6.945 4.703 1.00 5.58 ATOM 130 CA LYS 16 0.949 7.285 5.883 1.00 5.58 ATOM 131 CB LYS 16 0.640 6.079 6.789 1.00 5.58 ATOM 132 CG LYS 16 1.805 5.593 7.646 1.00 5.58 ATOM 133 CD LYS 16 1.352 4.608 8.724 1.00 5.58 ATOM 134 CE LYS 16 2.355 4.441 9.865 1.00 5.58 ATOM 135 NZ LYS 16 2.097 5.466 10.905 1.00 5.58 ATOM 136 C LYS 16 1.791 8.262 6.629 1.00 5.58 ATOM 137 O LYS 16 1.277 9.100 7.365 1.00 5.58 ATOM 138 N ASN 17 3.117 8.178 6.445 1.00 4.03 ATOM 139 CA ASN 17 4.046 9.037 7.116 1.00 4.03 ATOM 140 CB ASN 17 5.512 8.710 6.787 1.00 4.03 ATOM 141 CG ASN 17 5.862 7.390 7.460 1.00 4.03 ATOM 142 OD1 ASN 17 6.981 6.897 7.339 1.00 4.03 ATOM 143 ND2 ASN 17 4.882 6.804 8.197 1.00 4.03 ATOM 144 C ASN 17 3.804 10.468 6.742 1.00 4.03 ATOM 145 O ASN 17 4.014 11.353 7.567 1.00 4.03 ATOM 146 N CYS 18 3.374 10.759 5.499 1.00 5.15 ATOM 147 CA CYS 18 3.178 12.133 5.119 1.00 5.15 ATOM 148 CB CYS 18 2.685 12.302 3.673 1.00 5.15 ATOM 149 SG CYS 18 3.867 11.637 2.466 1.00 5.15 ATOM 150 C CYS 18 2.147 12.733 6.022 1.00 5.15 ATOM 151 O CYS 18 1.117 12.118 6.301 1.00 5.15 ATOM 152 N GLU 19 2.400 13.968 6.515 1.00 4.48 ATOM 153 CA GLU 19 1.459 14.548 7.430 1.00 4.48 ATOM 154 CB GLU 19 1.816 14.293 8.905 1.00 4.48 ATOM 155 CG GLU 19 1.722 12.806 9.256 1.00 4.48 ATOM 156 CD GLU 19 2.226 12.582 10.676 1.00 4.48 ATOM 157 OE1 GLU 19 1.621 13.143 11.627 1.00 4.48 ATOM 158 OE2 GLU 19 3.230 11.832 10.822 1.00 4.48 ATOM 159 C GLU 19 1.378 16.021 7.206 1.00 4.48 ATOM 160 O GLU 19 2.189 16.609 6.493 1.00 4.48 ATOM 161 N VAL 20 0.345 16.646 7.806 1.00 4.70 ATOM 162 CA VAL 20 0.115 18.054 7.686 1.00 4.70 ATOM 163 CB VAL 20 -1.122 18.377 6.907 1.00 4.70 ATOM 164 CG1 VAL 20 -0.979 17.848 5.466 1.00 4.70 ATOM 165 CG2 VAL 20 -2.309 17.780 7.682 1.00 4.70 ATOM 166 C VAL 20 -0.128 18.572 9.069 1.00 4.70 ATOM 167 O VAL 20 -0.385 17.804 9.993 1.00 4.70 ATOM 168 N ARG 21 -0.031 19.906 9.240 1.00 4.57 ATOM 169 CA ARG 21 -0.285 20.499 10.519 1.00 4.57 ATOM 170 CB ARG 21 0.823 21.461 10.980 1.00 4.57 ATOM 171 CG ARG 21 0.493 22.155 12.304 1.00 4.57 ATOM 172 CD ARG 21 1.507 23.219 12.736 1.00 4.57 ATOM 173 NE ARG 21 2.797 22.543 13.059 1.00 4.57 ATOM 174 CZ ARG 21 3.776 22.423 12.114 1.00 4.57 ATOM 175 NH1 ARG 21 3.576 22.928 10.861 1.00 4.57 ATOM 176 NH2 ARG 21 4.958 21.811 12.421 1.00 4.57 ATOM 177 C ARG 21 -1.524 21.315 10.378 1.00 4.57 ATOM 178 O ARG 21 -1.639 22.132 9.469 1.00 4.57 ATOM 179 N CYS 22 -2.498 21.108 11.283 1.00 4.66 ATOM 180 CA CYS 22 -3.702 21.872 11.195 1.00 4.66 ATOM 181 CB CYS 22 -4.987 21.038 11.315 1.00 4.66 ATOM 182 SG CYS 22 -6.478 22.072 11.188 1.00 4.66 ATOM 183 C CYS 22 -3.684 22.819 12.342 1.00 4.66 ATOM 184 O CYS 22 -3.019 22.578 13.347 1.00 4.66 ATOM 185 N ASP 23 -4.406 23.942 12.197 1.00 4.60 ATOM 186 CA ASP 23 -4.431 24.912 13.243 1.00 4.60 ATOM 187 CB ASP 23 -4.081 26.325 12.756 1.00 4.60 ATOM 188 CG ASP 23 -2.629 26.325 12.305 1.00 4.60 ATOM 189 OD1 ASP 23 -1.815 25.594 12.931 1.00 4.60 ATOM 190 OD2 ASP 23 -2.315 27.058 11.330 1.00 4.60 ATOM 191 C ASP 23 -5.827 24.968 13.765 1.00 4.60 ATOM 192 O ASP 23 -6.786 24.728 13.031 1.00 4.60 ATOM 193 N GLU 24 -5.960 25.251 15.077 1.00 4.99 ATOM 194 CA GLU 24 -7.242 25.408 15.694 1.00 4.99 ATOM 195 CB GLU 24 -7.581 24.320 16.730 1.00 4.99 ATOM 196 CG GLU 24 -7.796 22.927 16.125 1.00 4.99 ATOM 197 CD GLU 24 -8.132 21.963 17.260 1.00 4.99 ATOM 198 OE1 GLU 24 -8.313 22.443 18.411 1.00 4.99 ATOM 199 OE2 GLU 24 -8.217 20.735 16.991 1.00 4.99 ATOM 200 C GLU 24 -7.186 26.714 16.414 1.00 4.99 ATOM 201 O GLU 24 -6.120 27.141 16.856 1.00 4.99 ATOM 202 N SER 25 -8.342 27.393 16.532 1.00 6.44 ATOM 203 CA SER 25 -8.374 28.662 17.196 1.00 6.44 ATOM 204 CB SER 25 -8.026 28.574 18.692 1.00 6.44 ATOM 205 OG SER 25 -8.988 27.780 19.373 1.00 6.44 ATOM 206 C SER 25 -7.379 29.563 16.534 1.00 6.44 ATOM 207 O SER 25 -6.697 30.350 17.185 1.00 6.44 ATOM 208 N ASN 26 -7.303 29.485 15.196 1.00 4.91 ATOM 209 CA ASN 26 -6.397 30.291 14.434 1.00 4.91 ATOM 210 CB ASN 26 -6.847 31.751 14.270 1.00 4.91 ATOM 211 CG ASN 26 -6.105 32.311 13.066 1.00 4.91 ATOM 212 OD1 ASN 26 -5.462 33.356 13.138 1.00 4.91 ATOM 213 ND2 ASN 26 -6.200 31.587 11.919 1.00 4.91 ATOM 214 C ASN 26 -5.020 30.251 15.021 1.00 4.91 ATOM 215 O ASN 26 -4.510 31.253 15.522 1.00 4.91 ATOM 216 N HIS 27 -4.384 29.068 14.953 1.00 5.94 ATOM 217 CA HIS 27 -3.031 28.841 15.380 1.00 5.94 ATOM 218 ND1 HIS 27 0.168 30.131 15.937 1.00 5.94 ATOM 219 CG HIS 27 -0.594 29.594 14.920 1.00 5.94 ATOM 220 CB HIS 27 -2.063 29.858 14.730 1.00 5.94 ATOM 221 NE2 HIS 27 1.541 28.899 14.695 1.00 5.94 ATOM 222 CD2 HIS 27 0.262 28.844 14.173 1.00 5.94 ATOM 223 CE1 HIS 27 1.435 29.684 15.753 1.00 5.94 ATOM 224 C HIS 27 -2.889 28.931 16.868 1.00 5.94 ATOM 225 O HIS 27 -1.774 29.037 17.375 1.00 5.94 ATOM 226 N CYS 28 -3.990 28.838 17.635 1.00 4.93 ATOM 227 CA CYS 28 -3.777 28.841 19.052 1.00 4.93 ATOM 228 CB CYS 28 -5.068 28.831 19.891 1.00 4.93 ATOM 229 SG CYS 28 -5.896 30.452 19.926 1.00 4.93 ATOM 230 C CYS 28 -3.002 27.603 19.365 1.00 4.93 ATOM 231 O CYS 28 -2.005 27.647 20.085 1.00 4.93 ATOM 232 N VAL 29 -3.438 26.462 18.795 1.00 5.12 ATOM 233 CA VAL 29 -2.719 25.243 19.006 1.00 5.12 ATOM 234 CB VAL 29 -3.411 24.273 19.925 1.00 5.12 ATOM 235 CG1 VAL 29 -4.669 23.725 19.227 1.00 5.12 ATOM 236 CG2 VAL 29 -2.396 23.195 20.341 1.00 5.12 ATOM 237 C VAL 29 -2.561 24.593 17.670 1.00 5.12 ATOM 238 O VAL 29 -3.403 24.741 16.786 1.00 5.12 ATOM 239 N GLU 30 -1.444 23.864 17.494 1.00 5.19 ATOM 240 CA GLU 30 -1.143 23.200 16.262 1.00 5.19 ATOM 241 CB GLU 30 0.316 23.440 15.825 1.00 5.19 ATOM 242 CG GLU 30 1.336 23.089 16.914 1.00 5.19 ATOM 243 CD GLU 30 2.696 23.667 16.541 1.00 5.19 ATOM 244 OE1 GLU 30 3.331 23.135 15.591 1.00 5.19 ATOM 245 OE2 GLU 30 3.120 24.647 17.209 1.00 5.19 ATOM 246 C GLU 30 -1.353 21.734 16.478 1.00 5.19 ATOM 247 O GLU 30 -1.021 21.194 17.532 1.00 5.19 ATOM 248 N VAL 31 -1.945 21.054 15.476 1.00 5.42 ATOM 249 CA VAL 31 -2.190 19.646 15.588 1.00 5.42 ATOM 250 CB VAL 31 -3.649 19.298 15.553 1.00 5.42 ATOM 251 CG1 VAL 31 -3.788 17.767 15.581 1.00 5.42 ATOM 252 CG2 VAL 31 -4.346 20.010 16.726 1.00 5.42 ATOM 253 C VAL 31 -1.543 18.985 14.417 1.00 5.42 ATOM 254 O VAL 31 -1.490 19.536 13.319 1.00 5.42 ATOM 255 N ARG 32 -1.020 17.768 14.636 1.00 4.94 ATOM 256 CA ARG 32 -0.388 17.070 13.563 1.00 4.94 ATOM 257 CB ARG 32 1.011 16.540 13.919 1.00 4.94 ATOM 258 CG ARG 32 1.605 15.628 12.843 1.00 4.94 ATOM 259 CD ARG 32 3.042 15.183 13.128 1.00 4.94 ATOM 260 NE ARG 32 3.127 14.849 14.576 1.00 4.94 ATOM 261 CZ ARG 32 3.847 13.769 14.995 1.00 4.94 ATOM 262 NH1 ARG 32 4.411 12.923 14.083 1.00 4.94 ATOM 263 NH2 ARG 32 4.022 13.557 16.333 1.00 4.94 ATOM 264 C ARG 32 -1.240 15.891 13.237 1.00 4.94 ATOM 265 O ARG 32 -1.736 15.196 14.121 1.00 4.94 ATOM 266 N CYS 33 -1.456 15.658 11.931 1.00 4.89 ATOM 267 CA CYS 33 -2.242 14.534 11.519 1.00 4.89 ATOM 268 CB CYS 33 -3.681 14.909 11.127 1.00 4.89 ATOM 269 SG CYS 33 -4.623 15.658 12.488 1.00 4.89 ATOM 270 C CYS 33 -1.617 14.012 10.270 1.00 4.89 ATOM 271 O CYS 33 -0.897 14.731 9.579 1.00 4.89 ATOM 272 N SER 34 -1.848 12.728 9.943 1.00 4.52 ATOM 273 CA SER 34 -1.340 12.323 8.671 1.00 4.52 ATOM 274 CB SER 34 -1.002 10.836 8.554 1.00 4.52 ATOM 275 OG SER 34 -0.838 10.526 7.178 1.00 4.52 ATOM 276 C SER 34 -2.462 12.576 7.734 1.00 4.52 ATOM 277 O SER 34 -3.150 11.657 7.293 1.00 4.52 ATOM 278 N ASP 35 -2.679 13.860 7.420 1.00 4.80 ATOM 279 CA ASP 35 -3.734 14.196 6.523 1.00 4.80 ATOM 280 CB ASP 35 -3.964 15.706 6.401 1.00 4.80 ATOM 281 CG ASP 35 -5.376 15.903 5.864 1.00 4.80 ATOM 282 OD1 ASP 35 -6.164 14.917 5.887 1.00 4.80 ATOM 283 OD2 ASP 35 -5.693 17.041 5.435 1.00 4.80 ATOM 284 C ASP 35 -3.331 13.694 5.182 1.00 4.80 ATOM 285 O ASP 35 -4.152 13.185 4.418 1.00 4.80 ATOM 286 N THR 36 -2.026 13.813 4.872 1.00 4.25 ATOM 287 CA THR 36 -1.586 13.396 3.579 1.00 4.25 ATOM 288 CB THR 36 -0.117 13.565 3.342 1.00 4.25 ATOM 289 OG1 THR 36 0.248 14.928 3.492 1.00 4.25 ATOM 290 CG2 THR 36 0.189 13.092 1.909 1.00 4.25 ATOM 291 C THR 36 -1.901 11.955 3.448 1.00 4.25 ATOM 292 O THR 36 -2.508 11.556 2.453 1.00 4.25 ATOM 293 N LYS 37 -1.544 11.119 4.445 1.00 5.69 ATOM 294 CA LYS 37 -1.968 9.778 4.196 1.00 5.69 ATOM 295 CB LYS 37 -0.900 8.683 4.075 1.00 5.69 ATOM 296 CG LYS 37 -1.542 7.370 3.590 1.00 5.69 ATOM 297 CD LYS 37 -0.564 6.290 3.118 1.00 5.69 ATOM 298 CE LYS 37 -1.216 4.939 2.814 1.00 5.69 ATOM 299 NZ LYS 37 -1.619 4.864 1.391 1.00 5.69 ATOM 300 C LYS 37 -2.980 9.352 5.206 1.00 5.69 ATOM 301 O LYS 37 -4.050 9.943 5.293 1.00 5.69 ATOM 302 N TYR 38 -2.687 8.306 5.997 1.00 5.07 ATOM 303 CA TYR 38 -3.705 7.741 6.838 1.00 5.07 ATOM 304 CB TYR 38 -3.280 6.420 7.501 1.00 5.07 ATOM 305 CG TYR 38 -4.514 5.836 8.086 1.00 5.07 ATOM 306 CD1 TYR 38 -5.441 5.262 7.248 1.00 5.07 ATOM 307 CD2 TYR 38 -4.748 5.846 9.441 1.00 5.07 ATOM 308 CE1 TYR 38 -6.596 4.711 7.748 1.00 5.07 ATOM 309 CE2 TYR 38 -5.903 5.294 9.949 1.00 5.07 ATOM 310 CZ TYR 38 -6.829 4.731 9.099 1.00 5.07 ATOM 311 OH TYR 38 -8.020 4.163 9.607 1.00 5.07 ATOM 312 C TYR 38 -4.107 8.701 7.912 1.00 5.07 ATOM 313 O TYR 38 -3.271 9.300 8.584 1.00 5.07 ATOM 314 N THR 39 -5.430 8.858 8.115 1.00 5.48 ATOM 315 CA THR 39 -5.892 9.783 9.106 1.00 5.48 ATOM 316 CB THR 39 -7.393 9.839 9.221 1.00 5.48 ATOM 317 OG1 THR 39 -7.779 10.775 10.218 1.00 5.48 ATOM 318 CG2 THR 39 -7.946 8.437 9.539 1.00 5.48 ATOM 319 C THR 39 -5.305 9.390 10.422 1.00 5.48 ATOM 320 O THR 39 -5.640 8.361 11.006 1.00 5.48 ATOM 321 N LEU 40 -4.376 10.230 10.910 1.00 6.34 ATOM 322 CA LEU 40 -3.713 9.980 12.152 1.00 6.34 ATOM 323 CB LEU 40 -2.187 9.847 12.004 1.00 6.34 ATOM 324 CG LEU 40 -1.444 9.630 13.335 1.00 6.34 ATOM 325 CD1 LEU 40 -1.828 8.299 13.998 1.00 6.34 ATOM 326 CD2 LEU 40 0.072 9.796 13.152 1.00 6.34 ATOM 327 C LEU 40 -3.957 11.161 13.024 1.00 6.34 ATOM 328 O LEU 40 -4.052 12.289 12.542 1.00 6.34 ATOM 329 N CYS 41 -4.084 10.919 14.339 1.00 6.85 ATOM 330 CA CYS 41 -4.296 11.984 15.269 1.00 6.85 ATOM 331 CB CYS 41 -5.445 11.689 16.252 1.00 6.85 ATOM 332 SG CYS 41 -5.759 13.034 17.435 1.00 6.85 ATOM 333 C CYS 41 -3.002 12.080 16.073 1.00 6.85 ATOM 334 O CYS 41 -2.076 11.268 15.799 1.00 6.85 ATOM 335 OXT CYS 41 -2.925 12.966 16.965 1.00 6.85 TER END