####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 404), selected 97 , name T1021s3TS116_1-D2 # Molecule2: number of CA atoms 97 ( 736), selected 97 , name T1021s3-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 241 - 273 4.89 14.76 LONGEST_CONTINUOUS_SEGMENT: 33 242 - 274 4.77 14.67 LCS_AVERAGE: 31.54 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 195 - 212 1.49 14.79 LCS_AVERAGE: 11.50 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 196 - 212 0.69 14.93 LCS_AVERAGE: 8.20 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 97 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 195 L 195 3 18 32 3 3 5 8 12 16 22 25 27 28 30 35 39 45 50 53 56 59 63 67 LCS_GDT S 196 S 196 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 49 53 56 58 60 62 LCS_GDT P 197 P 197 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 56 59 63 67 LCS_GDT L 198 L 198 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 56 59 61 67 LCS_GDT V 199 V 199 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 56 59 61 67 LCS_GDT I 200 I 200 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 59 63 66 68 LCS_GDT T 201 T 201 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 52 55 59 63 67 68 LCS_GDT D 202 D 202 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 59 63 67 68 LCS_GDT A 203 A 203 17 18 32 9 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 59 63 67 68 LCS_GDT L 204 L 204 17 18 32 9 16 19 21 21 21 22 25 27 28 32 37 45 50 54 55 59 63 67 68 LCS_GDT R 205 R 205 17 18 32 6 16 19 21 21 21 22 25 27 31 36 42 45 50 54 55 59 63 67 68 LCS_GDT E 206 E 206 17 18 32 6 15 19 21 21 21 22 25 27 28 34 38 45 50 54 55 59 63 67 68 LCS_GDT Q 207 Q 207 17 18 32 3 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 59 63 67 68 LCS_GDT L 208 L 208 17 18 32 8 16 19 21 21 21 22 25 27 28 32 37 45 50 54 55 59 63 67 68 LCS_GDT R 209 R 209 17 18 32 8 16 19 21 21 21 22 25 27 28 36 40 45 50 54 55 59 63 67 68 LCS_GDT V 210 V 210 17 18 32 6 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 57 63 67 68 LCS_GDT A 211 A 211 17 18 32 5 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 56 63 67 68 LCS_GDT L 212 L 212 17 18 32 4 16 19 21 21 21 22 25 27 28 32 35 41 46 51 54 56 62 67 68 LCS_GDT D 217 D 217 3 5 32 1 3 3 4 5 6 10 13 15 18 25 30 37 41 48 53 56 62 67 68 LCS_GDT A 218 A 218 3 5 32 1 3 4 4 5 6 8 11 15 20 27 30 37 40 48 53 56 58 67 68 LCS_GDT C 219 C 219 3 3 32 0 3 3 3 3 6 7 11 15 18 25 30 37 39 45 49 53 62 67 68 LCS_GDT L 220 L 220 3 3 32 0 3 3 4 12 14 20 23 27 29 36 41 45 50 54 55 59 63 67 68 LCS_GDT A 221 A 221 3 4 32 1 4 7 9 15 19 22 25 27 30 36 41 45 50 54 55 59 63 67 68 LCS_GDT M 222 M 222 3 4 32 0 3 3 4 15 19 22 25 27 29 36 41 45 50 54 55 59 63 67 68 LCS_GDT T 223 T 223 3 7 32 1 4 7 10 13 16 22 25 29 34 38 42 45 50 54 55 59 63 67 68 LCS_GDT H 224 H 224 6 9 32 4 5 6 7 8 19 22 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT V 225 V 225 6 9 32 4 5 11 15 17 18 21 25 30 35 38 40 44 50 54 55 59 63 67 68 LCS_GDT N 226 N 226 6 9 32 3 5 6 9 9 11 19 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT L 227 L 227 6 9 32 4 5 6 9 9 11 14 20 23 31 36 40 45 50 54 55 59 63 67 68 LCS_GDT D 228 D 228 6 9 32 4 5 6 9 9 11 15 22 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT S 229 S 229 6 9 32 3 5 6 9 14 16 19 22 29 35 36 42 45 50 54 55 59 63 67 68 LCS_GDT S 230 S 230 6 9 32 3 5 7 10 15 16 19 23 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT P 231 P 231 6 9 26 3 5 6 9 9 11 17 22 30 35 38 42 44 50 54 55 59 63 67 68 LCS_GDT V 232 V 232 6 9 26 3 5 6 9 9 11 17 21 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT A 233 A 233 4 6 26 3 4 5 8 8 10 14 22 29 35 38 42 44 49 54 55 59 63 67 68 LCS_GDT N 234 N 234 4 6 26 3 4 5 6 6 11 15 20 29 31 36 40 44 46 51 55 59 63 67 68 LCS_GDT S 235 S 235 4 6 26 3 4 5 21 21 21 21 23 24 28 32 35 40 46 51 55 59 63 67 68 LCS_GDT D 236 D 236 4 6 26 3 14 19 21 21 21 22 23 25 28 32 35 41 46 51 54 56 63 65 68 LCS_GDT G 237 G 237 4 6 26 3 4 5 6 6 9 12 16 21 25 32 35 41 46 51 54 56 60 63 68 LCS_GDT S 238 S 238 3 5 26 3 3 4 4 5 9 12 16 19 24 29 35 41 46 51 54 56 60 63 67 LCS_GDT A 239 A 239 3 5 26 3 3 4 4 5 7 10 16 18 21 24 29 31 34 39 44 50 54 59 64 LCS_GDT A 240 A 240 3 5 26 3 3 4 4 6 12 14 16 18 21 29 32 35 40 45 52 57 60 63 67 LCS_GDT E 241 E 241 4 11 33 3 5 5 7 9 12 14 14 20 21 26 29 36 41 47 52 57 60 63 66 LCS_GDT I 242 I 242 5 11 33 3 5 6 8 9 11 17 22 29 35 38 42 44 49 54 55 58 63 67 68 LCS_GDT R 243 R 243 5 11 33 4 5 7 8 13 14 19 22 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT V 244 V 244 5 11 33 4 6 8 11 15 19 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT S 245 S 245 6 11 33 4 5 7 21 21 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT L 246 L 246 6 11 33 9 14 19 21 21 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT R 247 R 247 6 11 33 4 5 9 12 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT V 248 V 248 6 11 33 3 5 7 12 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT Y 249 Y 249 6 11 33 3 5 9 12 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT G 250 G 250 6 11 33 1 5 9 12 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT M 251 M 251 5 11 33 3 4 6 10 13 17 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT T 252 T 252 5 9 33 3 4 5 8 11 16 19 25 28 32 36 42 45 50 54 55 59 63 67 68 LCS_GDT P 253 P 253 5 9 33 3 4 5 8 11 13 16 19 25 30 36 41 45 50 54 55 59 63 67 68 LCS_GDT T 254 T 254 5 8 33 3 4 5 8 11 16 20 25 28 32 36 42 45 50 54 55 59 63 67 68 LCS_GDT E 255 E 255 3 4 33 3 3 3 4 5 8 14 17 25 30 36 41 45 50 54 55 59 63 67 68 LCS_GDT Y 256 Y 256 3 4 33 3 4 5 8 11 16 20 25 28 31 36 42 45 50 54 55 59 63 67 68 LCS_GDT L 257 L 257 3 14 33 2 4 7 12 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT A 258 A 258 13 14 33 8 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT P 259 P 259 13 14 33 8 12 12 13 17 21 23 25 29 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT M 260 M 260 13 14 33 9 12 12 13 17 21 23 23 30 35 38 42 44 50 54 55 58 63 66 68 LCS_GDT N 261 N 261 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT T 262 T 262 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT V 263 V 263 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT F 264 F 264 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 44 50 54 55 59 63 67 68 LCS_GDT N 265 N 265 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT E 266 E 266 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT W 267 W 267 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT E 268 E 268 13 14 33 9 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT K 269 K 269 13 14 33 4 12 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT S 270 S 270 13 14 33 3 6 12 13 17 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT E 271 E 271 3 14 33 3 3 4 7 9 14 16 20 25 35 38 42 45 50 54 55 58 63 67 68 LCS_GDT A 272 A 272 4 6 33 3 4 5 8 8 12 14 22 29 31 38 42 44 49 54 55 59 63 67 68 LCS_GDT A 273 A 273 4 6 33 4 4 5 8 9 14 18 22 29 31 38 42 45 50 54 55 59 63 67 68 LCS_GDT A 274 A 274 5 12 33 4 6 8 10 15 16 19 22 23 24 26 32 39 46 51 55 59 63 67 68 LCS_GDT V 275 V 275 5 12 27 4 4 5 7 15 16 19 22 23 23 28 35 41 46 51 54 56 58 64 68 LCS_GDT T 276 T 276 5 12 27 4 6 8 10 15 16 19 22 23 23 24 26 29 37 46 49 52 55 59 62 LCS_GDT P 277 P 277 5 12 27 4 4 5 8 15 16 19 22 23 23 23 25 26 28 29 33 40 47 53 55 LCS_GDT D 278 D 278 5 12 27 4 6 8 10 15 16 19 22 23 23 23 25 26 28 29 30 31 33 34 37 LCS_GDT G 279 G 279 7 12 27 3 6 7 9 15 16 19 22 23 23 23 25 26 28 29 30 31 33 34 37 LCS_GDT Y 280 Y 280 7 12 27 3 6 8 10 15 16 19 22 23 23 23 25 26 28 29 30 31 33 34 37 LCS_GDT R 281 R 281 7 12 27 5 6 7 9 15 16 19 22 23 23 23 25 26 28 31 35 36 40 54 59 LCS_GDT V 282 V 282 7 12 27 5 6 8 9 15 16 19 22 23 23 31 35 41 46 51 55 59 63 67 68 LCS_GDT Y 283 Y 283 7 12 27 5 6 7 10 15 16 19 22 24 30 38 42 45 50 54 55 59 63 67 68 LCS_GDT I 284 I 284 7 12 27 5 6 8 11 15 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 LCS_GDT N 285 N 285 7 12 27 5 6 7 9 12 16 19 24 28 32 36 41 45 50 54 55 58 63 67 68 LCS_GDT A 286 A 286 6 9 27 3 5 8 10 15 16 19 22 23 23 23 25 26 28 29 43 46 53 56 62 LCS_GDT V 287 V 287 3 9 27 3 3 5 9 13 16 19 22 23 23 23 25 26 28 29 30 31 33 35 43 LCS_GDT D 288 D 288 3 8 27 3 5 7 8 15 16 19 22 23 23 23 25 26 28 29 30 31 33 38 45 LCS_GDT K 289 K 289 3 8 27 3 5 8 10 14 16 19 22 23 23 23 25 26 28 29 30 31 33 33 34 LCS_GDT T 290 T 290 4 8 27 3 4 4 10 14 16 19 22 23 23 23 25 26 28 29 30 31 33 33 34 LCS_GDT D 291 D 291 4 8 27 3 5 5 7 8 12 18 18 20 23 23 25 26 28 29 30 31 33 33 34 LCS_GDT L 292 L 292 4 8 27 3 5 5 7 8 9 10 11 13 17 20 23 25 28 29 30 31 33 33 34 LCS_GDT T 293 T 293 4 8 27 3 5 5 7 8 9 10 13 15 19 22 23 25 28 29 30 31 33 33 34 LCS_GDT G 294 G 294 4 8 26 3 5 5 7 8 9 10 11 13 15 16 18 18 22 25 27 29 31 32 34 LCS_GDT I 295 I 295 3 6 23 0 3 4 4 5 6 8 9 13 15 16 18 19 22 25 25 26 29 30 32 LCS_AVERAGE LCS_A: 17.08 ( 8.20 11.50 31.54 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 16 19 21 21 21 23 25 30 35 38 42 45 50 54 55 59 63 67 68 GDT PERCENT_AT 9.28 16.49 19.59 21.65 21.65 21.65 23.71 25.77 30.93 36.08 39.18 43.30 46.39 51.55 55.67 56.70 60.82 64.95 69.07 70.10 GDT RMS_LOCAL 0.29 0.66 0.84 1.01 1.01 1.01 2.21 2.29 3.37 3.68 3.94 4.35 4.67 4.96 5.25 5.34 6.06 6.14 6.63 6.67 GDT RMS_ALL_AT 14.81 14.94 15.06 15.14 15.14 15.14 15.47 15.08 15.25 15.28 15.22 14.82 14.53 14.50 14.48 14.49 14.23 14.31 14.23 14.21 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA L 195 L 195 4.049 4 0.552 0.552 5.975 20.909 10.455 - LGA S 196 S 196 1.840 2 0.571 0.571 1.840 66.364 44.242 - LGA P 197 P 197 0.765 3 0.033 0.033 1.326 78.182 44.675 - LGA L 198 L 198 2.171 4 0.038 0.038 2.171 44.545 22.273 - LGA V 199 V 199 2.264 3 0.074 0.074 2.264 44.545 25.455 - LGA I 200 I 200 1.070 4 0.026 0.026 1.238 73.636 36.818 - LGA T 201 T 201 0.654 3 0.031 0.031 0.791 86.364 49.351 - LGA D 202 D 202 1.742 4 0.226 0.226 1.742 58.182 29.091 - LGA A 203 A 203 1.574 1 0.076 0.076 1.574 61.818 49.455 - LGA L 204 L 204 0.802 4 0.197 0.197 0.802 86.364 43.182 - LGA R 205 R 205 0.776 7 0.030 0.030 1.107 77.727 28.264 - LGA E 206 E 206 1.010 5 0.279 0.279 1.429 73.636 32.727 - LGA Q 207 Q 207 1.060 5 0.046 0.046 1.888 70.455 31.313 - LGA L 208 L 208 2.065 4 0.061 0.061 2.065 47.727 23.864 - LGA R 209 R 209 1.299 7 0.047 0.047 1.479 73.636 26.777 - LGA V 210 V 210 0.542 3 0.142 0.142 1.233 77.727 44.416 - LGA A 211 A 211 1.203 1 0.119 0.119 1.564 65.909 52.727 - LGA L 212 L 212 1.844 4 0.168 0.168 2.263 47.727 23.864 - LGA D 217 D 217 11.977 4 0.284 0.284 11.977 0.000 0.000 - LGA A 218 A 218 8.967 1 0.641 0.641 11.460 0.000 0.000 - LGA C 219 C 219 10.291 2 0.669 0.669 10.291 0.000 0.000 - LGA L 220 L 220 7.152 4 0.659 0.659 7.948 0.000 0.000 - LGA A 221 A 221 3.368 1 0.542 0.542 4.171 14.091 11.273 - LGA M 222 M 222 2.797 4 0.563 0.563 4.340 21.818 10.909 - LGA T 223 T 223 3.507 3 0.616 0.616 3.507 25.909 14.805 - LGA H 224 H 224 2.800 6 0.556 0.556 3.930 20.909 8.364 - LGA V 225 V 225 3.148 3 0.109 0.109 3.925 23.636 13.506 - LGA N 226 N 226 3.616 4 0.581 0.581 4.823 10.455 5.227 - LGA L 227 L 227 6.797 4 0.354 0.354 9.851 0.000 0.000 - LGA D 228 D 228 8.320 4 0.048 0.048 9.007 0.000 0.000 - LGA S 229 S 229 11.760 2 0.050 0.050 12.614 0.000 0.000 - LGA S 230 S 230 11.872 2 0.039 0.039 13.069 0.000 0.000 - LGA P 231 P 231 16.719 3 0.148 0.148 16.719 0.000 0.000 - LGA V 232 V 232 15.260 3 0.428 0.428 16.996 0.000 0.000 - LGA A 233 A 233 14.221 1 0.680 0.680 14.887 0.000 0.000 - LGA N 234 N 234 13.760 4 0.300 0.300 14.356 0.000 0.000 - LGA S 235 S 235 11.103 2 0.669 0.669 12.123 0.000 0.000 - LGA D 236 D 236 11.682 4 0.207 0.207 13.360 0.000 0.000 - LGA G 237 G 237 16.256 0 0.669 0.669 19.662 0.000 0.000 - LGA S 238 S 238 21.395 2 0.118 0.118 22.559 0.000 0.000 - LGA A 239 A 239 26.347 1 0.668 0.668 26.347 0.000 0.000 - LGA A 240 A 240 25.548 1 0.226 0.226 25.897 0.000 0.000 - LGA E 241 E 241 26.060 5 0.506 0.506 26.060 0.000 0.000 - LGA I 242 I 242 21.034 4 0.047 0.047 22.755 0.000 0.000 - LGA R 243 R 243 15.598 7 0.098 0.098 17.527 0.000 0.000 - LGA V 244 V 244 11.760 3 0.038 0.038 12.865 0.000 0.000 - LGA S 245 S 245 8.062 2 0.064 0.064 9.555 0.000 0.000 - LGA L 246 L 246 5.784 4 0.130 0.130 6.369 0.909 0.455 - LGA R 247 R 247 4.182 7 0.096 0.096 4.342 5.455 1.983 - LGA V 248 V 248 4.776 3 0.115 0.115 6.881 0.909 0.519 - LGA Y 249 Y 249 6.407 8 0.536 0.536 7.942 0.000 0.000 - LGA G 250 G 250 9.490 0 0.540 0.540 11.741 0.000 0.000 - LGA M 251 M 251 8.747 4 0.076 0.076 8.747 0.000 0.000 - LGA T 252 T 252 8.759 3 0.055 0.055 10.709 0.000 0.000 - LGA P 253 P 253 10.077 3 0.589 0.589 10.709 0.000 0.000 - LGA T 254 T 254 12.987 3 0.597 0.597 12.987 0.000 0.000 - LGA E 255 E 255 11.040 5 0.674 0.674 11.420 0.000 0.000 - LGA Y 256 Y 256 11.094 8 0.726 0.726 11.135 0.000 0.000 - LGA L 257 L 257 13.646 4 0.581 0.581 14.270 0.000 0.000 - LGA A 258 A 258 16.815 1 0.633 0.633 16.815 0.000 0.000 - LGA P 259 P 259 17.043 3 0.048 0.048 17.130 0.000 0.000 - LGA M 260 M 260 15.381 4 0.087 0.087 16.072 0.000 0.000 - LGA N 261 N 261 14.046 4 0.112 0.112 14.675 0.000 0.000 - LGA T 262 T 262 15.139 3 0.049 0.049 15.139 0.000 0.000 - LGA V 263 V 263 14.842 3 0.099 0.099 15.002 0.000 0.000 - LGA F 264 F 264 12.867 7 0.036 0.036 13.472 0.000 0.000 - LGA N 265 N 265 13.254 4 0.101 0.101 14.151 0.000 0.000 - LGA E 266 E 266 15.181 5 0.126 0.126 15.181 0.000 0.000 - LGA W 267 W 267 13.865 10 0.033 0.033 14.231 0.000 0.000 - LGA E 268 E 268 12.270 5 0.051 0.051 12.787 0.000 0.000 - LGA K 269 K 269 13.988 5 0.538 0.538 17.836 0.000 0.000 - LGA S 270 S 270 17.545 2 0.595 0.595 18.122 0.000 0.000 - LGA E 271 E 271 20.210 5 0.104 0.104 20.366 0.000 0.000 - LGA A 272 A 272 18.756 1 0.200 0.200 19.367 0.000 0.000 - LGA A 273 A 273 14.588 1 0.221 0.221 15.787 0.000 0.000 - LGA A 274 A 274 13.252 1 0.161 0.161 14.667 0.000 0.000 - LGA V 275 V 275 13.185 3 0.087 0.087 13.712 0.000 0.000 - LGA T 276 T 276 16.536 3 0.053 0.053 17.603 0.000 0.000 - LGA P 277 P 277 19.074 3 0.192 0.192 22.237 0.000 0.000 - LGA D 278 D 278 24.348 4 0.097 0.097 26.680 0.000 0.000 - LGA G 279 G 279 23.080 0 0.751 0.751 23.080 0.000 0.000 - LGA Y 280 Y 280 18.275 8 0.628 0.628 20.088 0.000 0.000 - LGA R 281 R 281 16.877 7 0.323 0.323 17.002 0.000 0.000 - LGA V 282 V 282 11.433 3 0.058 0.058 13.746 0.000 0.000 - LGA Y 283 Y 283 12.283 8 0.099 0.099 12.283 0.000 0.000 - LGA I 284 I 284 11.799 4 0.095 0.095 14.867 0.000 0.000 - LGA N 285 N 285 13.574 4 0.586 0.586 16.804 0.000 0.000 - LGA A 286 A 286 16.351 1 0.559 0.559 17.291 0.000 0.000 - LGA V 287 V 287 19.949 3 0.669 0.669 19.949 0.000 0.000 - LGA D 288 D 288 18.935 4 0.109 0.109 20.344 0.000 0.000 - LGA K 289 K 289 23.375 5 0.631 0.631 25.772 0.000 0.000 - LGA T 290 T 290 24.116 3 0.486 0.486 27.706 0.000 0.000 - LGA D 291 D 291 28.474 4 0.321 0.321 31.697 0.000 0.000 - LGA L 292 L 292 32.370 4 0.631 0.631 33.248 0.000 0.000 - LGA T 293 T 293 35.500 3 0.387 0.387 37.423 0.000 0.000 - LGA G 294 G 294 37.830 0 0.118 0.118 37.830 0.000 0.000 - LGA I 295 I 295 37.764 4 0.705 0.705 38.341 0.000 0.000 - # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 97 388 388 100.00 736 388 52.72 97 0 SUMMARY(RMSD_GDC): 13.380 13.446 13.446 13.191 7.072 0.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 97 4.0 25 2.29 30.155 25.429 1.044 LGA_LOCAL RMSD: 2.294 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.081 Number of assigned atoms: 97 Std_ASGN_ATOMS RMSD: 13.380 Standard rmsd on all 97 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.017622 * X + 0.706155 * Y + -0.707838 * Z + -50.292461 Y_new = -0.900286 * X + -0.296758 * Y + -0.318465 * Z + 34.527451 Z_new = -0.434942 * X + 0.642869 * Y + 0.630512 * Z + 95.364532 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.551225 0.449974 0.795102 [DEG: -88.8787 25.7816 45.5560 ] ZXZ: -1.148015 0.888584 -0.594824 [DEG: -65.7764 50.9121 -34.0809 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1021s3TS116_1-D2 REMARK 2: T1021s3-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1021s3TS116_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 97 4.0 25 2.29 25.429 13.38 REMARK ---------------------------------------------------------- MOLECULE T1021s3TS116_1-D2 PFRMAT TS TARGET T1021s3 MODEL 1 PARENT 3fz2J 3eo7A 3rhwA 2q85A 2gjvA ATOM 777 N LEU 195 -43.147 17.127 73.658 1.00 1.00 ATOM 778 CA LEU 195 -44.281 17.459 72.854 1.00 1.00 ATOM 779 C LEU 195 -45.307 18.192 73.658 1.00 1.00 ATOM 780 O LEU 195 -45.663 19.319 73.323 1.00 1.00 ATOM 781 N SER 196 -45.794 17.561 74.743 1.00 1.00 ATOM 782 CA SER 196 -46.861 18.181 75.471 1.00 1.00 ATOM 783 C SER 196 -46.382 19.294 76.352 1.00 1.00 ATOM 784 O SER 196 -46.923 20.396 76.305 1.00 1.00 ATOM 785 N PRO 197 -45.381 19.085 77.168 1.00 1.00 ATOM 786 CA PRO 197 -45.002 20.155 78.042 1.00 1.00 ATOM 787 C PRO 197 -44.448 21.358 77.363 1.00 1.00 ATOM 788 O PRO 197 -44.591 22.470 77.867 1.00 1.00 ATOM 789 N LEU 198 -43.800 21.211 76.200 1.00 1.00 ATOM 790 CA LEU 198 -43.273 22.385 75.576 1.00 1.00 ATOM 791 C LEU 198 -44.396 23.284 75.181 1.00 1.00 ATOM 792 O LEU 198 -44.324 24.492 75.395 1.00 1.00 ATOM 793 N VAL 199 -45.470 22.721 74.600 1.00 1.00 ATOM 794 CA VAL 199 -46.552 23.567 74.195 1.00 1.00 ATOM 795 C VAL 199 -47.162 24.183 75.411 1.00 1.00 ATOM 796 O VAL 199 -47.465 25.373 75.414 1.00 1.00 ATOM 797 N ILE 200 -47.355 23.391 76.485 1.00 1.00 ATOM 798 CA ILE 200 -48.009 23.951 77.631 1.00 1.00 ATOM 799 C ILE 200 -47.184 25.039 78.238 1.00 1.00 ATOM 800 O ILE 200 -47.698 26.119 78.519 1.00 1.00 ATOM 801 N THR 201 -45.878 24.785 78.450 1.00 1.00 ATOM 802 CA THR 201 -45.013 25.723 79.109 1.00 1.00 ATOM 803 C THR 201 -44.866 26.960 78.285 1.00 1.00 ATOM 804 O THR 201 -44.928 28.067 78.817 1.00 1.00 ATOM 805 N ASP 202 -44.676 26.795 76.963 1.00 1.00 ATOM 806 CA ASP 202 -44.466 27.927 76.111 1.00 1.00 ATOM 807 C ASP 202 -45.682 28.787 76.141 1.00 1.00 ATOM 808 O ASP 202 -45.571 30.008 76.217 1.00 1.00 ATOM 809 N ALA 203 -46.871 28.164 76.089 1.00 1.00 ATOM 810 CA ALA 203 -48.082 28.926 76.075 1.00 1.00 ATOM 811 C ALA 203 -48.169 29.694 77.353 1.00 1.00 ATOM 812 O ALA 203 -48.527 30.868 77.343 1.00 1.00 ATOM 813 N LEU 204 -47.837 29.049 78.485 1.00 1.00 ATOM 814 CA LEU 204 -47.958 29.717 79.748 1.00 1.00 ATOM 815 C LEU 204 -47.014 30.882 79.822 1.00 1.00 ATOM 816 O LEU 204 -47.420 31.983 80.189 1.00 1.00 ATOM 817 N ARG 205 -45.730 30.672 79.469 1.00 1.00 ATOM 818 CA ARG 205 -44.751 31.717 79.602 1.00 1.00 ATOM 819 C ARG 205 -45.045 32.867 78.694 1.00 1.00 ATOM 820 O ARG 205 -45.002 34.018 79.123 1.00 1.00 ATOM 821 N GLU 206 -45.360 32.590 77.414 1.00 1.00 ATOM 822 CA GLU 206 -45.563 33.663 76.480 1.00 1.00 ATOM 823 C GLU 206 -46.736 34.449 76.938 1.00 1.00 ATOM 824 O GLU 206 -46.721 35.675 76.869 1.00 1.00 ATOM 825 N GLN 207 -47.756 33.725 77.417 1.00 1.00 ATOM 826 CA GLN 207 -48.963 34.324 77.878 1.00 1.00 ATOM 827 C GLN 207 -48.620 35.191 79.034 1.00 1.00 ATOM 828 O GLN 207 -49.207 36.257 79.201 1.00 1.00 ATOM 829 N LEU 208 -47.654 34.755 79.855 1.00 1.00 ATOM 830 CA LEU 208 -47.348 35.484 81.042 1.00 1.00 ATOM 831 C LEU 208 -46.921 36.858 80.638 1.00 1.00 ATOM 832 O LEU 208 -47.340 37.839 81.250 1.00 1.00 ATOM 833 N ARG 209 -46.083 36.975 79.594 1.00 1.00 ATOM 834 CA ARG 209 -45.635 38.282 79.208 1.00 1.00 ATOM 835 C ARG 209 -46.808 39.092 78.744 1.00 1.00 ATOM 836 O ARG 209 -46.927 40.263 79.099 1.00 1.00 ATOM 837 N VAL 210 -47.698 38.480 77.945 1.00 1.00 ATOM 838 CA VAL 210 -48.824 39.182 77.400 1.00 1.00 ATOM 839 C VAL 210 -49.749 39.611 78.502 1.00 1.00 ATOM 840 O VAL 210 -50.251 40.731 78.483 1.00 1.00 ATOM 841 N ALA 211 -49.982 38.726 79.488 1.00 1.00 ATOM 842 CA ALA 211 -50.891 38.930 80.582 1.00 1.00 ATOM 843 C ALA 211 -50.420 40.093 81.372 1.00 1.00 ATOM 844 O ALA 211 -51.232 40.866 81.875 1.00 1.00 ATOM 845 N LEU 212 -49.090 40.233 81.486 1.00 1.00 ATOM 846 CA LEU 212 -48.524 41.319 82.219 1.00 1.00 ATOM 847 C LEU 212 -49.065 42.518 81.529 1.00 1.00 ATOM 848 O LEU 212 -49.369 43.518 82.177 1.00 1.00 ATOM 849 N GLY 213 -49.188 42.406 80.196 1.00 1.00 ATOM 850 CA GLY 213 -49.771 43.458 79.431 1.00 1.00 ATOM 851 C GLY 213 -48.778 44.555 79.365 1.00 1.00 ATOM 852 O GLY 213 -47.588 44.300 79.194 1.00 1.00 ATOM 853 N GLY 214 -49.260 45.799 79.511 1.00 1.00 ATOM 854 CA GLY 214 -48.365 46.899 79.387 1.00 1.00 ATOM 855 C GLY 214 -48.526 47.410 78.001 1.00 1.00 ATOM 856 O GLY 214 -47.914 48.413 77.638 1.00 1.00 ATOM 857 N ASP 215 -49.368 46.720 77.209 1.00 1.00 ATOM 858 CA ASP 215 -49.608 47.139 75.865 1.00 1.00 ATOM 859 C ASP 215 -50.219 48.499 75.954 1.00 1.00 ATOM 860 O ASP 215 -49.787 49.416 75.260 1.00 1.00 ATOM 861 N TYR 216 -51.235 48.635 76.825 1.00 1.00 ATOM 862 CA TYR 216 -51.890 49.897 76.991 1.00 1.00 ATOM 863 C TYR 216 -51.967 50.098 78.463 1.00 1.00 ATOM 864 O TYR 216 -52.220 49.149 79.201 1.00 1.00 ATOM 865 N ASP 217 -51.759 51.347 78.936 1.00 1.00 ATOM 866 CA ASP 217 -51.744 51.600 80.351 1.00 1.00 ATOM 867 C ASP 217 -50.759 50.633 80.912 1.00 1.00 ATOM 868 O ASP 217 -51.059 49.942 81.884 1.00 1.00 ATOM 869 N ALA 218 -49.570 50.599 80.287 1.00 1.00 ATOM 870 CA ALA 218 -48.575 49.601 80.529 1.00 1.00 ATOM 871 C ALA 218 -48.281 49.430 81.978 1.00 1.00 ATOM 872 O ALA 218 -48.101 50.416 82.691 1.00 1.00 ATOM 873 N CYS 219 -48.234 48.143 82.384 1.00 1.00 ATOM 874 CA CYS 219 -47.847 47.729 83.696 1.00 1.00 ATOM 875 C CYS 219 -47.075 46.468 83.475 1.00 1.00 ATOM 876 O CYS 219 -47.472 45.637 82.662 1.00 1.00 ATOM 877 N LEU 220 -45.956 46.294 84.198 1.00 1.00 ATOM 878 CA LEU 220 -45.143 45.129 84.010 1.00 1.00 ATOM 879 C LEU 220 -45.312 44.244 85.199 1.00 1.00 ATOM 880 O LEU 220 -45.930 44.644 86.183 1.00 1.00 ATOM 881 N ALA 221 -44.756 43.021 85.126 1.00 1.00 ATOM 882 CA ALA 221 -44.928 42.094 86.200 1.00 1.00 ATOM 883 C ALA 221 -43.742 41.183 86.215 1.00 1.00 ATOM 884 O ALA 221 -42.890 41.266 85.333 1.00 1.00 ATOM 885 N MET 222 -43.681 40.292 87.229 1.00 1.00 ATOM 886 CA MET 222 -42.580 39.379 87.356 1.00 1.00 ATOM 887 C MET 222 -43.082 38.009 87.025 1.00 1.00 ATOM 888 O MET 222 -44.252 37.709 87.252 1.00 1.00 ATOM 889 N THR 223 -42.185 37.155 86.484 1.00 1.00 ATOM 890 CA THR 223 -42.534 35.823 86.081 1.00 1.00 ATOM 891 C THR 223 -41.690 34.864 86.859 1.00 1.00 ATOM 892 O THR 223 -40.476 35.041 86.947 1.00 1.00 ATOM 893 N HIS 224 -42.308 33.816 87.440 1.00 1.00 ATOM 894 CA HIS 224 -41.460 32.897 88.147 1.00 1.00 ATOM 895 C HIS 224 -41.848 31.502 87.772 1.00 1.00 ATOM 896 O HIS 224 -43.032 31.169 87.775 1.00 1.00 ATOM 897 N VAL 225 -40.852 30.655 87.447 1.00 1.00 ATOM 898 CA VAL 225 -41.160 29.299 87.091 1.00 1.00 ATOM 899 C VAL 225 -40.603 28.413 88.158 1.00 1.00 ATOM 900 O VAL 225 -39.417 28.493 88.469 1.00 1.00 ATOM 901 N ASN 226 -41.450 27.541 88.738 1.00 1.00 ATOM 902 CA ASN 226 -40.916 26.699 89.769 1.00 1.00 ATOM 903 C ASN 226 -41.528 25.337 89.688 1.00 1.00 ATOM 904 O ASN 226 -42.614 25.180 89.133 1.00 1.00 ATOM 905 N LEU 227 -40.821 24.339 90.257 1.00 1.00 ATOM 906 CA LEU 227 -41.302 22.990 90.305 1.00 1.00 ATOM 907 C LEU 227 -41.334 22.559 91.740 1.00 1.00 ATOM 908 O LEU 227 -40.433 22.898 92.505 1.00 1.00 ATOM 909 N ASP 228 -42.379 21.793 92.123 1.00 1.00 ATOM 910 CA ASP 228 -42.500 21.299 93.466 1.00 1.00 ATOM 911 C ASP 228 -43.153 19.949 93.401 1.00 1.00 ATOM 912 O ASP 228 -44.066 19.744 92.605 1.00 1.00 ATOM 913 N SER 229 -42.703 18.998 94.242 1.00 1.00 ATOM 914 CA SER 229 -43.328 17.706 94.227 1.00 1.00 ATOM 915 C SER 229 -44.601 17.806 95.010 1.00 1.00 ATOM 916 O SER 229 -44.686 18.589 95.953 1.00 1.00 ATOM 917 N SER 230 -45.625 17.005 94.642 1.00 1.00 ATOM 918 CA SER 230 -46.836 17.054 95.411 1.00 1.00 ATOM 919 C SER 230 -47.268 15.652 95.710 1.00 1.00 ATOM 920 O SER 230 -47.505 14.871 94.792 1.00 1.00 ATOM 921 N PRO 231 -47.369 15.360 96.975 1.00 1.00 ATOM 922 CA PRO 231 -47.805 14.046 97.366 1.00 1.00 ATOM 923 C PRO 231 -49.296 13.921 97.439 1.00 1.00 ATOM 924 O PRO 231 -49.989 14.917 97.630 1.00 1.00 ATOM 925 N VAL 232 -49.805 12.678 97.291 1.00 1.00 ATOM 926 CA VAL 232 -51.196 12.344 97.413 1.00 1.00 ATOM 927 C VAL 232 -52.023 13.371 96.701 1.00 1.00 ATOM 928 O VAL 232 -52.865 14.022 97.316 1.00 1.00 ATOM 929 N ALA 233 -51.794 13.523 95.387 1.00 1.00 ATOM 930 CA ALA 233 -52.564 14.482 94.653 1.00 1.00 ATOM 931 C ALA 233 -53.580 13.714 93.876 1.00 1.00 ATOM 932 O ALA 233 -53.271 12.657 93.333 1.00 1.00 ATOM 933 N ASN 234 -54.820 14.240 93.805 1.00 1.00 ATOM 934 CA ASN 234 -55.848 13.522 93.111 1.00 1.00 ATOM 935 C ASN 234 -55.949 14.052 91.720 1.00 1.00 ATOM 936 O ASN 234 -55.983 15.265 91.524 1.00 1.00 ATOM 937 N SER 235 -56.006 13.129 90.746 1.00 1.00 ATOM 938 CA SER 235 -56.151 13.493 89.370 1.00 1.00 ATOM 939 C SER 235 -57.212 12.591 88.830 1.00 1.00 ATOM 940 O SER 235 -57.140 11.377 89.012 1.00 1.00 ATOM 941 N ASP 236 -58.218 13.169 88.148 1.00 1.00 ATOM 942 CA ASP 236 -59.274 12.423 87.524 1.00 1.00 ATOM 943 C ASP 236 -59.843 11.393 88.450 1.00 1.00 ATOM 944 O ASP 236 -60.038 10.247 88.051 1.00 1.00 ATOM 945 N GLY 237 -60.128 11.778 89.706 1.00 1.00 ATOM 946 CA GLY 237 -60.822 10.898 90.604 1.00 1.00 ATOM 947 C GLY 237 -59.913 9.860 91.177 1.00 1.00 ATOM 948 O GLY 237 -60.376 8.924 91.824 1.00 1.00 ATOM 949 N SER 238 -58.590 9.979 90.976 1.00 1.00 ATOM 950 CA SER 238 -57.743 8.980 91.561 1.00 1.00 ATOM 951 C SER 238 -56.690 9.686 92.349 1.00 1.00 ATOM 952 O SER 238 -56.358 10.830 92.046 1.00 1.00 ATOM 953 N ALA 239 -56.144 9.006 93.375 1.00 1.00 ATOM 954 CA ALA 239 -55.130 9.619 94.180 1.00 1.00 ATOM 955 C ALA 239 -53.816 9.132 93.675 1.00 1.00 ATOM 956 O ALA 239 -53.656 7.940 93.422 1.00 1.00 ATOM 957 N ALA 240 -52.852 10.057 93.528 1.00 1.00 ATOM 958 CA ALA 240 -51.564 9.664 93.042 1.00 1.00 ATOM 959 C ALA 240 -50.591 9.867 94.153 1.00 1.00 ATOM 960 O ALA 240 -50.649 10.881 94.845 1.00 1.00 ATOM 961 N GLU 241 -49.678 8.896 94.329 1.00 1.00 ATOM 962 CA GLU 241 -48.715 8.987 95.382 1.00 1.00 ATOM 963 C GLU 241 -47.808 10.141 95.099 1.00 1.00 ATOM 964 O GLU 241 -47.496 10.915 96.001 1.00 1.00 ATOM 965 N ILE 242 -47.365 10.286 93.835 1.00 1.00 ATOM 966 CA ILE 242 -46.447 11.350 93.553 1.00 1.00 ATOM 967 C ILE 242 -46.934 12.120 92.370 1.00 1.00 ATOM 968 O ILE 242 -47.412 11.529 91.404 1.00 1.00 ATOM 969 N ARG 243 -46.808 13.459 92.439 1.00 1.00 ATOM 970 CA ARG 243 -47.251 14.309 91.375 1.00 1.00 ATOM 971 C ARG 243 -46.243 15.411 91.251 1.00 1.00 ATOM 972 O ARG 243 -45.576 15.749 92.226 1.00 1.00 ATOM 973 N VAL 244 -46.121 15.999 90.041 1.00 1.00 ATOM 974 CA VAL 244 -45.188 17.073 89.852 1.00 1.00 ATOM 975 C VAL 244 -45.974 18.329 89.657 1.00 1.00 ATOM 976 O VAL 244 -46.952 18.334 88.913 1.00 1.00 ATOM 977 N SER 245 -45.555 19.424 90.320 1.00 1.00 ATOM 978 CA SER 245 -46.272 20.655 90.158 1.00 1.00 ATOM 979 C SER 245 -45.334 21.641 89.531 1.00 1.00 ATOM 980 O SER 245 -44.218 21.822 90.013 1.00 1.00 ATOM 981 N LEU 246 -45.777 22.302 88.444 1.00 1.00 ATOM 982 CA LEU 246 -44.944 23.285 87.819 1.00 1.00 ATOM 983 C LEU 246 -45.761 24.527 87.751 1.00 1.00 ATOM 984 O LEU 246 -46.891 24.495 87.269 1.00 1.00 ATOM 985 N ARG 247 -45.208 25.655 88.228 1.00 1.00 ATOM 986 CA ARG 247 -46.002 26.846 88.178 1.00 1.00 ATOM 987 C ARG 247 -45.241 27.930 87.494 1.00 1.00 ATOM 988 O ARG 247 -44.018 27.990 87.605 1.00 1.00 ATOM 989 N VAL 248 -45.982 28.804 86.782 1.00 1.00 ATOM 990 CA VAL 248 -45.412 29.993 86.219 1.00 1.00 ATOM 991 C VAL 248 -46.187 31.089 86.876 1.00 1.00 ATOM 992 O VAL 248 -47.339 31.330 86.517 1.00 1.00 ATOM 993 N TYR 249 -45.582 31.796 87.856 1.00 1.00 ATOM 994 CA TYR 249 -46.357 32.768 88.575 1.00 1.00 ATOM 995 C TYR 249 -46.765 33.953 87.768 1.00 1.00 ATOM 996 O TYR 249 -47.955 34.174 87.555 1.00 1.00 ATOM 997 N GLY 250 -45.830 34.782 87.266 1.00 1.00 ATOM 998 CA GLY 250 -46.251 35.924 86.494 1.00 1.00 ATOM 999 C GLY 250 -47.250 36.744 87.267 1.00 1.00 ATOM 1000 O GLY 250 -48.381 36.918 86.821 1.00 1.00 ATOM 1001 N MET 251 -46.881 37.285 88.445 1.00 1.00 ATOM 1002 CA MET 251 -47.860 38.052 89.165 1.00 1.00 ATOM 1003 C MET 251 -47.937 39.414 88.552 1.00 1.00 ATOM 1004 O MET 251 -46.923 40.100 88.445 1.00 1.00 ATOM 1005 N THR 252 -49.154 39.826 88.144 1.00 1.00 ATOM 1006 CA THR 252 -49.347 41.115 87.552 1.00 1.00 ATOM 1007 C THR 252 -50.520 41.732 88.232 1.00 1.00 ATOM 1008 O THR 252 -51.417 41.022 88.681 1.00 1.00 ATOM 1009 N PRO 253 -50.515 43.031 88.301 1.00 1.00 ATOM 1010 CA PRO 253 -51.606 43.709 88.939 1.00 1.00 ATOM 1011 C PRO 253 -52.882 43.485 88.206 1.00 1.00 ATOM 1012 O PRO 253 -53.943 43.421 88.823 1.00 1.00 ATOM 1013 N THR 254 -52.819 43.352 86.873 1.00 1.00 ATOM 1014 CA THR 254 -54.013 43.054 86.155 1.00 1.00 ATOM 1015 C THR 254 -53.865 41.644 85.721 1.00 1.00 ATOM 1016 O THR 254 -53.159 41.368 84.753 1.00 1.00 ATOM 1017 N GLU 255 -54.530 40.713 86.422 1.00 1.00 ATOM 1018 CA GLU 255 -54.368 39.368 85.984 1.00 1.00 ATOM 1019 C GLU 255 -54.961 39.299 84.626 1.00 1.00 ATOM 1020 O GLU 255 -56.069 39.783 84.411 1.00 1.00 ATOM 1021 N TYR 256 -54.213 38.684 83.704 1.00 1.00 ATOM 1022 CA TYR 256 -54.715 38.525 82.382 1.00 1.00 ATOM 1023 C TYR 256 -54.489 37.079 82.084 1.00 1.00 ATOM 1024 O TYR 256 -53.563 36.476 82.622 1.00 1.00 ATOM 1025 N LEU 257 -55.328 36.500 81.212 1.00 1.00 ATOM 1026 CA LEU 257 -55.222 35.105 80.899 1.00 1.00 ATOM 1027 C LEU 257 -54.872 34.998 79.452 1.00 1.00 ATOM 1028 O LEU 257 -54.222 35.887 78.907 1.00 1.00 ATOM 1029 N ALA 258 -55.311 33.895 78.798 1.00 1.00 ATOM 1030 CA ALA 258 -55.095 33.735 77.386 1.00 1.00 ATOM 1031 C ALA 258 -55.785 32.486 76.919 1.00 1.00 ATOM 1032 O ALA 258 -56.032 31.583 77.717 1.00 1.00 ATOM 1033 N PRO 259 -56.075 32.459 75.641 1.00 1.00 ATOM 1034 CA PRO 259 -56.668 31.324 74.974 1.00 1.00 ATOM 1035 C PRO 259 -55.657 30.232 74.873 1.00 1.00 ATOM 1036 O PRO 259 -56.021 29.068 74.723 1.00 1.00 ATOM 1037 N MET 260 -54.374 30.612 74.963 1.00 1.00 ATOM 1038 CA MET 260 -53.263 29.718 74.896 1.00 1.00 ATOM 1039 C MET 260 -53.401 28.836 76.082 1.00 1.00 ATOM 1040 O MET 260 -52.999 27.675 76.038 1.00 1.00 ATOM 1041 N ASN 261 -53.985 29.398 77.151 1.00 1.00 ATOM 1042 CA ASN 261 -54.194 28.654 78.346 1.00 1.00 ATOM 1043 C ASN 261 -55.069 27.496 78.008 1.00 1.00 ATOM 1044 O ASN 261 -54.857 26.395 78.514 1.00 1.00 ATOM 1045 N THR 262 -56.066 27.726 77.139 1.00 1.00 ATOM 1046 CA THR 262 -56.994 26.688 76.805 1.00 1.00 ATOM 1047 C THR 262 -56.255 25.552 76.169 1.00 1.00 ATOM 1048 O THR 262 -56.479 24.397 76.522 1.00 1.00 ATOM 1049 N VAL 263 -55.348 25.853 75.220 1.00 1.00 ATOM 1050 CA VAL 263 -54.664 24.793 74.541 1.00 1.00 ATOM 1051 C VAL 263 -53.807 24.041 75.507 1.00 1.00 ATOM 1052 O VAL 263 -53.714 22.819 75.426 1.00 1.00 ATOM 1053 N PHE 264 -53.158 24.743 76.457 1.00 1.00 ATOM 1054 CA PHE 264 -52.294 24.002 77.329 1.00 1.00 ATOM 1055 C PHE 264 -53.147 23.061 78.114 1.00 1.00 ATOM 1056 O PHE 264 -52.721 21.949 78.417 1.00 1.00 ATOM 1057 N ASN 265 -54.379 23.478 78.458 1.00 1.00 ATOM 1058 CA ASN 265 -55.245 22.639 79.240 1.00 1.00 ATOM 1059 C ASN 265 -55.464 21.335 78.534 1.00 1.00 ATOM 1060 O ASN 265 -55.423 20.279 79.161 1.00 1.00 ATOM 1061 N GLU 266 -55.697 21.364 77.210 1.00 1.00 ATOM 1062 CA GLU 266 -56.005 20.136 76.529 1.00 1.00 ATOM 1063 C GLU 266 -54.842 19.200 76.595 1.00 1.00 ATOM 1064 O GLU 266 -55.018 18.014 76.870 1.00 1.00 ATOM 1065 N TRP 267 -53.618 19.703 76.352 1.00 1.00 ATOM 1066 CA TRP 267 -52.470 18.840 76.340 1.00 1.00 ATOM 1067 C TRP 267 -52.271 18.274 77.707 1.00 1.00 ATOM 1068 O TRP 267 -51.871 17.119 77.843 1.00 1.00 ATOM 1069 N GLU 268 -52.555 19.085 78.737 1.00 1.00 ATOM 1070 CA GLU 268 -52.426 18.688 80.108 1.00 1.00 ATOM 1071 C GLU 268 -53.359 17.541 80.336 1.00 1.00 ATOM 1072 O GLU 268 -53.012 16.594 81.039 1.00 1.00 ATOM 1073 N LYS 269 -54.564 17.599 79.739 1.00 1.00 ATOM 1074 CA LYS 269 -55.536 16.561 79.929 1.00 1.00 ATOM 1075 C LYS 269 -55.016 15.267 79.383 1.00 1.00 ATOM 1076 O LYS 269 -55.232 14.215 79.981 1.00 1.00 ATOM 1077 N SER 270 -54.311 15.300 78.238 1.00 1.00 ATOM 1078 CA SER 270 -53.848 14.068 77.669 1.00 1.00 ATOM 1079 C SER 270 -52.943 13.423 78.672 1.00 1.00 ATOM 1080 O SER 270 -52.937 12.201 78.800 1.00 1.00 ATOM 1081 N GLU 271 -52.177 14.258 79.392 1.00 1.00 ATOM 1082 CA GLU 271 -51.237 13.850 80.396 1.00 1.00 ATOM 1083 C GLU 271 -51.991 13.287 81.562 1.00 1.00 ATOM 1084 O GLU 271 -51.410 12.590 82.392 1.00 1.00 ATOM 1085 N ALA 272 -53.306 13.575 81.646 1.00 1.00 ATOM 1086 CA ALA 272 -54.092 13.144 82.768 1.00 1.00 ATOM 1087 C ALA 272 -53.651 13.960 83.934 1.00 1.00 ATOM 1088 O ALA 272 -53.755 13.512 85.075 1.00 1.00 ATOM 1089 N ALA 273 -53.165 15.162 83.592 1.00 1.00 ATOM 1090 CA ALA 273 -52.687 16.204 84.443 1.00 1.00 ATOM 1091 C ALA 273 -53.830 17.113 84.778 1.00 1.00 ATOM 1092 O ALA 273 -54.937 16.920 84.280 1.00 1.00 ATOM 1093 N ALA 274 -53.566 18.127 85.629 1.00 1.00 ATOM 1094 CA ALA 274 -54.564 19.104 85.962 1.00 1.00 ATOM 1095 C ALA 274 -53.872 20.421 86.140 1.00 1.00 ATOM 1096 O ALA 274 -52.682 20.454 86.450 1.00 1.00 ATOM 1097 N VAL 275 -54.613 21.533 85.952 1.00 1.00 ATOM 1098 CA VAL 275 -54.061 22.846 86.136 1.00 1.00 ATOM 1099 C VAL 275 -55.030 23.600 86.992 1.00 1.00 ATOM 1100 O VAL 275 -56.226 23.316 86.966 1.00 1.00 ATOM 1101 N THR 276 -54.540 24.588 87.770 1.00 1.00 ATOM 1102 CA THR 276 -55.445 25.349 88.585 1.00 1.00 ATOM 1103 C THR 276 -55.303 26.798 88.227 1.00 1.00 ATOM 1104 O THR 276 -54.198 27.258 87.947 1.00 1.00 ATOM 1105 N PRO 277 -56.431 27.456 88.259 1.00 1.00 ATOM 1106 CA PRO 277 -56.522 28.856 87.909 1.00 1.00 ATOM 1107 C PRO 277 -56.101 29.806 88.987 1.00 1.00 ATOM 1108 O PRO 277 -55.747 29.377 90.084 1.00 1.00 ATOM 1109 N ASP 278 -56.147 31.118 88.665 1.00 1.00 ATOM 1110 CA ASP 278 -55.778 32.212 89.520 1.00 1.00 ATOM 1111 C ASP 278 -54.366 31.992 89.916 1.00 1.00 ATOM 1112 O ASP 278 -53.987 32.308 91.042 1.00 1.00 ATOM 1113 N GLY 279 -53.611 31.449 88.952 1.00 1.00 ATOM 1114 CA GLY 279 -52.224 31.150 89.084 1.00 1.00 ATOM 1115 C GLY 279 -51.994 30.097 88.061 1.00 1.00 ATOM 1116 O GLY 279 -52.939 29.441 87.629 1.00 1.00 ATOM 1117 N TYR 280 -50.744 29.878 87.629 1.00 1.00 ATOM 1118 CA TYR 280 -50.624 28.848 86.650 1.00 1.00 ATOM 1119 C TYR 280 -49.924 27.717 87.312 1.00 1.00 ATOM 1120 O TYR 280 -48.708 27.763 87.490 1.00 1.00 ATOM 1121 N ARG 281 -50.687 26.668 87.685 1.00 1.00 ATOM 1122 CA ARG 281 -50.083 25.538 88.323 1.00 1.00 ATOM 1123 C ARG 281 -50.394 24.349 87.477 1.00 1.00 ATOM 1124 O ARG 281 -51.562 24.063 87.222 1.00 1.00 ATOM 1125 N VAL 282 -49.351 23.627 87.032 1.00 1.00 ATOM 1126 CA VAL 282 -49.568 22.471 86.219 1.00 1.00 ATOM 1127 C VAL 282 -49.189 21.289 87.049 1.00 1.00 ATOM 1128 O VAL 282 -48.160 21.311 87.719 1.00 1.00 ATOM 1129 N TYR 283 -50.013 20.221 87.016 1.00 1.00 ATOM 1130 CA TYR 283 -49.695 19.064 87.803 1.00 1.00 ATOM 1131 C TYR 283 -49.554 17.912 86.868 1.00 1.00 ATOM 1132 O TYR 283 -50.412 17.706 86.012 1.00 1.00 ATOM 1133 N ILE 284 -48.471 17.124 87.004 1.00 1.00 ATOM 1134 CA ILE 284 -48.255 15.986 86.156 1.00 1.00 ATOM 1135 C ILE 284 -48.150 14.814 87.079 1.00 1.00 ATOM 1136 O ILE 284 -47.642 14.949 88.189 1.00 1.00 ATOM 1137 N ASN 285 -48.620 13.625 86.652 1.00 1.00 ATOM 1138 CA ASN 285 -48.584 12.509 87.552 1.00 1.00 ATOM 1139 C ASN 285 -47.272 11.796 87.412 1.00 1.00 ATOM 1140 O ASN 285 -46.992 11.225 86.361 1.00 1.00 ATOM 1141 N ALA 286 -46.450 11.816 88.481 1.00 1.00 ATOM 1142 CA ALA 286 -45.210 11.095 88.464 1.00 1.00 ATOM 1143 C ALA 286 -45.514 9.635 88.476 1.00 1.00 ATOM 1144 O ALA 286 -44.977 8.886 87.663 1.00 1.00 ATOM 1145 N VAL 287 -46.393 9.217 89.407 1.00 1.00 ATOM 1146 CA VAL 287 -46.774 7.838 89.465 1.00 1.00 ATOM 1147 C VAL 287 -48.115 7.792 90.110 1.00 1.00 ATOM 1148 O VAL 287 -48.386 8.569 91.023 1.00 1.00 ATOM 1149 N ASP 288 -48.978 6.870 89.649 1.00 1.00 ATOM 1150 CA ASP 288 -50.285 6.816 90.222 1.00 1.00 ATOM 1151 C ASP 288 -50.107 6.463 91.656 1.00 1.00 ATOM 1152 O ASP 288 -50.708 7.093 92.524 1.00 1.00 ATOM 1153 N LYS 289 -49.269 5.451 91.930 1.00 1.00 ATOM 1154 CA LYS 289 -49.027 5.095 93.293 1.00 1.00 ATOM 1155 C LYS 289 -47.715 4.393 93.337 1.00 1.00 ATOM 1156 O LYS 289 -47.152 4.072 92.292 1.00 1.00 ATOM 1157 N THR 290 -47.209 4.135 94.555 1.00 1.00 ATOM 1158 CA THR 290 -45.932 3.500 94.660 1.00 1.00 ATOM 1159 C THR 290 -46.132 2.028 94.482 1.00 1.00 ATOM 1160 O THR 290 -45.826 1.251 95.383 1.00 1.00 ATOM 1161 N ASP 291 -46.648 1.642 93.303 1.00 1.00 ATOM 1162 CA ASP 291 -46.825 0.249 93.047 1.00 1.00 ATOM 1163 C ASP 291 -45.475 -0.374 92.952 1.00 1.00 ATOM 1164 O ASP 291 -45.254 -1.452 93.498 1.00 1.00 ATOM 1165 N LEU 292 -44.542 0.304 92.258 1.00 1.00 ATOM 1166 CA LEU 292 -43.242 -0.272 92.101 1.00 1.00 ATOM 1167 C LEU 292 -42.631 -0.282 93.459 1.00 1.00 ATOM 1168 O LEU 292 -42.494 0.769 94.081 1.00 1.00 ATOM 1169 N THR 293 -42.245 -1.478 93.939 1.00 1.00 ATOM 1170 CA THR 293 -41.658 -1.529 95.239 1.00 1.00 ATOM 1171 C THR 293 -40.214 -1.202 95.086 1.00 1.00 ATOM 1172 O THR 293 -39.544 -1.756 94.219 1.00 1.00 ATOM 1173 N GLY 294 -39.718 -0.294 95.941 1.00 1.00 ATOM 1174 CA GLY 294 -38.336 0.062 95.861 1.00 1.00 ATOM 1175 C GLY 294 -38.057 0.949 97.019 1.00 1.00 ATOM 1176 O GLY 294 -38.966 1.595 97.536 1.00 1.00 ATOM 1177 N ILE 295 -36.783 0.997 97.441 1.00 1.00 ATOM 1178 CA ILE 295 -36.430 1.827 98.547 1.00 1.00 ATOM 1179 C ILE 295 -35.798 3.081 97.965 1.00 1.00 ATOM 1180 O ILE 295 -35.689 3.196 96.730 1.00 1.00 TER END