####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS043_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 3 - 42 5.00 6.20 LCS_AVERAGE: 88.53 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 7 - 21 1.68 13.53 LCS_AVERAGE: 30.32 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 7 - 19 0.55 14.50 LCS_AVERAGE: 22.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 27 3 3 5 5 5 6 6 6 7 10 12 18 21 22 37 39 41 42 42 42 LCS_GDT V 3 V 3 3 4 40 3 3 5 5 5 6 6 9 11 11 24 34 36 38 39 40 41 42 42 42 LCS_GDT Q 4 Q 4 5 6 40 4 5 5 6 9 20 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT G 5 G 5 5 6 40 0 6 7 10 11 16 22 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT P 6 P 6 5 14 40 4 5 5 5 8 9 15 23 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT W 7 W 7 13 15 40 5 12 13 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT V 8 V 8 13 15 40 10 12 13 13 15 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT G 9 G 9 13 15 40 8 12 13 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT S 10 S 10 13 15 40 10 12 13 13 15 15 16 21 25 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT S 11 S 11 13 15 40 10 12 13 13 15 15 16 20 25 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT Y 12 Y 12 13 15 40 10 12 13 13 15 15 16 20 25 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT V 13 V 13 13 15 40 10 12 13 13 15 15 16 20 25 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT A 14 A 14 13 15 40 10 12 13 13 15 15 16 16 18 20 23 31 35 38 39 40 41 42 42 42 LCS_GDT E 15 E 15 13 15 40 10 12 13 13 15 15 16 16 17 19 23 23 25 28 32 40 40 42 42 42 LCS_GDT T 16 T 16 13 15 40 10 12 13 13 15 15 16 16 17 19 23 23 30 38 39 40 41 42 42 42 LCS_GDT G 17 G 17 13 15 40 10 12 13 13 15 15 16 16 18 22 27 31 35 38 39 40 41 42 42 42 LCS_GDT Q 18 Q 18 13 15 40 10 12 13 13 15 15 16 20 25 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT N 19 N 19 13 15 40 9 12 13 13 15 15 16 17 23 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT W 20 W 20 12 15 40 9 11 11 12 13 15 23 25 26 29 30 35 36 37 39 40 41 42 42 42 LCS_GDT A 21 A 21 12 15 40 9 11 11 12 15 15 23 25 27 29 32 35 36 38 39 40 41 42 42 42 LCS_GDT S 22 S 22 12 14 40 9 11 11 12 14 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT L 23 L 23 12 14 40 9 11 11 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT A 24 A 24 12 14 40 9 11 11 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT A 25 A 25 12 14 40 9 11 11 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT N 26 N 26 12 14 40 9 11 11 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT E 27 E 27 12 14 40 9 11 11 12 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT L 28 L 28 12 14 40 9 11 11 12 16 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT R 29 R 29 12 14 40 8 11 11 12 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT V 30 V 30 12 14 40 8 11 11 12 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT T 31 T 31 12 14 40 4 7 11 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT E 32 E 32 3 14 40 1 3 3 5 5 10 15 20 25 27 30 35 36 38 39 40 41 42 42 42 LCS_GDT R 33 R 33 8 14 40 1 7 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT P 34 P 34 8 14 40 4 7 8 13 17 20 24 25 27 29 31 35 36 38 39 40 41 42 42 42 LCS_GDT F 35 F 35 8 14 40 4 7 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT W 36 W 36 8 14 40 4 7 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT I 37 I 37 8 14 40 4 7 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT S 38 S 38 8 13 40 3 7 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT S 39 S 39 8 13 40 3 6 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT F 40 F 40 8 13 40 4 6 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT I 41 I 41 6 13 40 4 6 8 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 LCS_GDT G 42 G 42 6 13 40 4 6 8 13 17 21 24 25 27 29 32 35 36 38 39 40 41 42 42 42 LCS_GDT R 43 R 43 6 13 29 4 5 8 10 13 17 23 25 27 29 30 31 35 37 37 39 41 42 42 42 LCS_GDT S 44 S 44 6 13 29 0 3 6 10 12 14 17 21 26 27 30 31 31 33 35 38 38 39 40 42 LCS_GDT K 45 K 45 3 13 29 1 3 3 3 7 7 14 16 19 24 27 28 31 32 32 33 35 37 40 40 LCS_AVERAGE LCS_A: 46.99 ( 22.11 30.32 88.53 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 13 17 21 24 25 27 30 32 35 36 38 39 40 41 42 42 42 GDT PERCENT_AT 22.73 27.27 29.55 29.55 38.64 47.73 54.55 56.82 61.36 68.18 72.73 79.55 81.82 86.36 88.64 90.91 93.18 95.45 95.45 95.45 GDT RMS_LOCAL 0.34 0.44 0.55 0.55 1.88 2.16 2.33 2.41 2.64 3.65 3.74 4.02 4.16 4.74 4.82 5.00 5.14 5.32 5.32 5.32 GDT RMS_ALL_AT 14.32 14.58 14.50 14.50 7.09 7.12 7.10 7.16 7.13 6.21 6.16 6.17 6.11 6.15 6.12 6.20 5.97 6.02 6.02 6.02 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.691 0 0.367 0.427 13.745 0.000 0.000 - LGA V 3 V 3 8.942 0 0.582 0.612 13.030 0.000 0.000 9.642 LGA Q 4 Q 4 3.257 0 0.362 0.869 7.554 30.455 18.990 4.381 LGA G 5 G 5 3.718 0 0.398 0.398 6.854 9.545 9.545 - LGA P 6 P 6 4.661 0 0.193 0.463 6.974 8.182 4.675 6.974 LGA W 7 W 7 2.678 0 0.485 1.348 4.331 22.273 28.701 2.937 LGA V 8 V 8 2.663 0 0.080 0.087 5.810 38.636 22.857 5.418 LGA G 9 G 9 2.583 0 0.101 0.101 5.620 23.636 23.636 - LGA S 10 S 10 8.441 0 0.100 0.666 10.928 0.000 0.000 9.979 LGA S 11 S 11 9.422 0 0.076 0.589 11.708 0.000 0.000 9.191 LGA Y 12 Y 12 8.210 0 0.067 1.164 10.667 0.000 3.636 3.945 LGA V 13 V 13 10.921 0 0.018 0.059 14.813 0.000 0.000 13.640 LGA A 14 A 14 16.112 0 0.019 0.020 19.022 0.000 0.000 - LGA E 15 E 15 16.938 0 0.095 0.882 19.338 0.000 0.000 19.142 LGA T 16 T 16 15.138 0 0.094 0.118 16.421 0.000 0.000 10.678 LGA G 17 G 17 16.044 0 0.041 0.041 16.044 0.000 0.000 - LGA Q 18 Q 18 10.014 0 0.058 0.263 13.373 0.000 0.000 9.741 LGA N 19 N 19 8.393 0 0.615 1.400 14.513 0.000 0.000 13.342 LGA W 20 W 20 5.482 0 0.610 1.235 13.106 1.818 0.519 12.328 LGA A 21 A 21 4.794 0 0.044 0.043 5.286 4.545 3.636 - LGA S 22 S 22 3.241 0 0.023 0.627 4.276 25.455 19.697 4.276 LGA L 23 L 23 2.601 0 0.075 1.421 6.100 42.727 25.682 3.300 LGA A 24 A 24 2.029 0 0.004 0.014 2.820 44.545 41.091 - LGA A 25 A 25 1.868 0 0.031 0.030 2.148 54.545 51.273 - LGA N 26 N 26 1.114 0 0.003 0.901 2.464 59.091 55.227 2.230 LGA E 27 E 27 1.731 0 0.068 0.853 4.265 43.182 37.576 4.265 LGA L 28 L 28 2.962 0 0.059 0.067 4.087 22.273 18.409 3.770 LGA R 29 R 29 2.775 0 0.066 1.689 12.380 25.000 10.579 12.380 LGA V 30 V 30 2.505 0 0.591 0.571 3.751 31.818 27.273 3.472 LGA T 31 T 31 1.042 0 0.690 1.388 5.117 40.909 28.831 3.761 LGA E 32 E 32 6.070 0 0.481 0.884 12.306 1.818 0.808 12.306 LGA R 33 R 33 2.531 0 0.128 0.221 8.155 10.909 16.198 8.155 LGA P 34 P 34 3.065 0 0.080 0.087 4.408 26.364 20.519 4.062 LGA F 35 F 35 1.512 0 0.020 1.164 8.246 44.545 24.959 8.246 LGA W 36 W 36 1.421 0 0.043 0.071 2.757 65.455 48.182 2.757 LGA I 37 I 37 1.806 0 0.016 0.364 3.893 50.909 41.364 3.893 LGA S 38 S 38 1.623 0 0.020 0.065 2.504 45.455 45.152 2.049 LGA S 39 S 39 2.707 0 0.066 0.110 3.509 30.000 24.848 3.509 LGA F 40 F 40 2.539 0 0.112 0.961 4.556 32.727 22.645 4.556 LGA I 41 I 41 0.803 0 0.016 0.637 5.646 66.818 47.955 5.646 LGA G 42 G 42 2.519 0 0.034 0.034 5.064 20.909 20.909 - LGA R 43 R 43 5.842 0 0.279 1.073 13.380 1.364 0.496 13.380 LGA S 44 S 44 8.468 0 0.176 0.635 10.032 0.000 0.000 10.032 LGA K 45 K 45 11.103 0 0.336 0.759 22.375 0.000 0.000 22.375 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 5.912 5.910 7.061 21.043 16.952 7.013 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 25 2.41 51.136 48.001 0.996 LGA_LOCAL RMSD: 2.409 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.156 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 5.912 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.732301 * X + 0.007954 * Y + -0.680935 * Z + 13.863894 Y_new = -0.680465 * X + -0.047482 * Y + 0.731241 * Z + 42.857807 Z_new = -0.026516 * X + 0.998840 * Y + 0.040184 * Z + -0.349210 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.392869 0.026519 1.530588 [DEG: -137.1013 1.5194 87.6962 ] ZXZ: -2.391803 1.530602 -0.026541 [DEG: -137.0402 87.6970 -1.5207 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS043_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS043_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 25 2.41 48.001 5.91 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS043_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 11.307 40.681 1.112 1.00 16.78 N ATOM 21 CA ALA 2 10.839 40.166 2.394 1.00 16.78 C ATOM 22 C ALA 2 10.084 38.855 2.219 1.00 16.78 C ATOM 23 O ALA 2 8.859 38.814 2.327 1.00 16.78 O ATOM 24 CB ALA 2 9.958 41.196 3.088 1.00 16.78 C ATOM 30 N VAL 3 10.822 37.784 1.949 1.00 17.34 N ATOM 31 CA VAL 3 10.221 36.475 1.722 1.00 17.34 C ATOM 32 C VAL 3 9.791 35.832 3.034 1.00 17.34 C ATOM 33 O VAL 3 8.655 35.375 3.168 1.00 17.34 O ATOM 34 CB VAL 3 11.216 35.548 1.000 1.00 17.34 C ATOM 35 CG1 VAL 3 10.652 34.138 0.900 1.00 17.34 C ATOM 36 CG2 VAL 3 11.533 36.102 -0.380 1.00 17.34 C ATOM 46 N GLN 4 10.703 35.800 3.998 1.00 16.09 N ATOM 47 CA GLN 4 10.453 35.126 5.267 1.00 16.09 C ATOM 48 C GLN 4 9.502 35.934 6.141 1.00 16.09 C ATOM 49 O GLN 4 9.908 36.504 7.154 1.00 16.09 O ATOM 50 CB GLN 4 11.768 34.881 6.012 1.00 16.09 C ATOM 51 CG GLN 4 12.746 33.987 5.270 1.00 16.09 C ATOM 52 CD GLN 4 12.232 32.568 5.117 1.00 16.09 C ATOM 53 OE1 GLN 4 11.911 31.899 6.103 1.00 16.09 O ATOM 54 NE2 GLN 4 12.152 32.098 3.877 1.00 16.09 N ATOM 63 N GLY 5 8.235 35.979 5.745 1.00 14.99 N ATOM 64 CA GLY 5 7.223 36.712 6.496 1.00 14.99 C ATOM 65 C GLY 5 6.060 37.119 5.601 1.00 14.99 C ATOM 66 O GLY 5 5.085 36.381 5.460 1.00 14.99 O ATOM 70 N PRO 6 6.168 38.298 4.998 1.00 14.75 N ATOM 71 CA PRO 6 5.106 38.824 4.148 1.00 14.75 C ATOM 72 C PRO 6 4.741 37.836 3.048 1.00 14.75 C ATOM 73 O PRO 6 3.571 37.507 2.859 1.00 14.75 O ATOM 74 CB PRO 6 5.726 40.102 3.575 1.00 14.75 C ATOM 75 CG PRO 6 6.666 40.561 4.638 1.00 14.75 C ATOM 76 CD PRO 6 7.273 39.291 5.173 1.00 14.75 C ATOM 84 N TRP 7 5.751 37.363 2.324 1.00 14.70 N ATOM 85 CA TRP 7 5.536 36.420 1.233 1.00 14.70 C ATOM 86 C TRP 7 4.927 35.120 1.742 1.00 14.70 C ATOM 87 O TRP 7 3.989 34.589 1.147 1.00 14.70 O ATOM 88 CB TRP 7 6.856 36.124 0.518 1.00 14.70 C ATOM 89 CG TRP 7 6.719 35.141 -0.606 1.00 14.70 C ATOM 90 CD1 TRP 7 6.422 35.424 -1.905 1.00 14.70 C ATOM 91 CD2 TRP 7 6.876 33.702 -0.535 1.00 14.70 C ATOM 92 NE1 TRP 7 6.382 34.268 -2.644 1.00 14.70 N ATOM 93 CE2 TRP 7 6.658 33.205 -1.822 1.00 14.70 C ATOM 94 CE3 TRP 7 7.180 32.812 0.503 1.00 14.70 C ATOM 95 CZ2 TRP 7 6.732 31.851 -2.107 1.00 14.70 C ATOM 96 CZ3 TRP 7 7.254 31.454 0.217 1.00 14.70 C ATOM 97 CH2 TRP 7 7.037 30.987 -1.054 1.00 14.70 C ATOM 108 N VAL 8 5.465 34.611 2.845 1.00 12.61 N ATOM 109 CA VAL 8 4.920 33.420 3.484 1.00 12.61 C ATOM 110 C VAL 8 3.441 33.594 3.802 1.00 12.61 C ATOM 111 O VAL 8 2.631 32.706 3.536 1.00 12.61 O ATOM 112 CB VAL 8 5.688 33.113 4.784 1.00 12.61 C ATOM 113 CG1 VAL 8 4.971 32.036 5.585 1.00 12.61 C ATOM 114 CG2 VAL 8 7.111 32.684 4.456 1.00 12.61 C ATOM 124 N GLY 9 3.093 34.743 4.372 1.00 12.21 N ATOM 125 CA GLY 9 1.707 35.045 4.706 1.00 12.21 C ATOM 126 C GLY 9 0.828 35.046 3.462 1.00 12.21 C ATOM 127 O GLY 9 -0.284 34.518 3.476 1.00 12.21 O ATOM 131 N SER 10 1.334 35.641 2.387 1.00 14.12 N ATOM 132 CA SER 10 0.610 35.680 1.122 1.00 14.12 C ATOM 133 C SER 10 0.329 34.274 0.605 1.00 14.12 C ATOM 134 O SER 10 -0.782 33.973 0.170 1.00 14.12 O ATOM 135 CB SER 10 1.405 36.458 0.091 1.00 14.12 C ATOM 136 OG SER 10 0.728 36.501 -1.135 1.00 14.12 O ATOM 142 N SER 11 1.345 33.418 0.653 1.00 14.89 N ATOM 143 CA SER 11 1.212 32.046 0.178 1.00 14.89 C ATOM 144 C SER 11 0.295 31.234 1.083 1.00 14.89 C ATOM 145 O SER 11 -0.370 30.300 0.635 1.00 14.89 O ATOM 146 CB SER 11 2.575 31.387 0.100 1.00 14.89 C ATOM 147 OG SER 11 3.101 31.169 1.380 1.00 14.89 O ATOM 153 N TYR 12 0.265 31.595 2.362 1.00 12.79 N ATOM 154 CA TYR 12 -0.640 30.965 3.315 1.00 12.79 C ATOM 155 C TYR 12 -2.095 31.272 2.979 1.00 12.79 C ATOM 156 O TYR 12 -2.948 30.386 3.000 1.00 12.79 O ATOM 157 CB TYR 12 -0.318 31.418 4.740 1.00 12.79 C ATOM 158 CG TYR 12 -1.115 30.697 5.806 1.00 12.79 C ATOM 159 CD1 TYR 12 -0.732 29.429 6.219 1.00 12.79 C ATOM 160 CD2 TYR 12 -2.228 31.303 6.368 1.00 12.79 C ATOM 161 CE1 TYR 12 -1.459 28.771 7.191 1.00 12.79 C ATOM 162 CE2 TYR 12 -2.956 30.644 7.341 1.00 12.79 C ATOM 163 CZ TYR 12 -2.575 29.383 7.751 1.00 12.79 C ATOM 164 OH TYR 12 -3.299 28.728 8.720 1.00 12.79 O ATOM 174 N VAL 13 -2.370 32.534 2.670 1.00 12.58 N ATOM 175 CA VAL 13 -3.693 32.938 2.206 1.00 12.58 C ATOM 176 C VAL 13 -4.067 32.219 0.917 1.00 12.58 C ATOM 177 O VAL 13 -5.179 31.710 0.778 1.00 12.58 O ATOM 178 CB VAL 13 -3.736 34.460 1.973 1.00 12.58 C ATOM 179 CG1 VAL 13 -5.032 34.856 1.281 1.00 12.58 C ATOM 180 CG2 VAL 13 -3.586 35.191 3.298 1.00 12.58 C ATOM 190 N ALA 14 -3.132 32.180 -0.027 1.00 14.64 N ATOM 191 CA ALA 14 -3.362 31.522 -1.308 1.00 14.64 C ATOM 192 C ALA 14 -3.635 30.035 -1.122 1.00 14.64 C ATOM 193 O ALA 14 -4.471 29.457 -1.815 1.00 14.64 O ATOM 194 CB ALA 14 -2.169 31.730 -2.230 1.00 14.64 C ATOM 200 N GLU 15 -2.925 29.422 -0.181 1.00 15.02 N ATOM 201 CA GLU 15 -3.022 27.983 0.035 1.00 15.02 C ATOM 202 C GLU 15 -4.264 27.631 0.844 1.00 15.02 C ATOM 203 O GLU 15 -5.088 26.824 0.414 1.00 15.02 O ATOM 204 CB GLU 15 -1.772 27.466 0.750 1.00 15.02 C ATOM 205 CG GLU 15 -1.762 25.962 0.989 1.00 15.02 C ATOM 206 CD GLU 15 -0.484 25.478 1.617 1.00 15.02 C ATOM 207 OE1 GLU 15 0.389 26.284 1.840 1.00 15.02 O ATOM 208 OE2 GLU 15 -0.380 24.303 1.873 1.00 15.02 O ATOM 215 N THR 16 -4.392 28.240 2.018 1.00 14.26 N ATOM 216 CA THR 16 -5.423 27.853 2.974 1.00 14.26 C ATOM 217 C THR 16 -6.655 28.740 2.844 1.00 14.26 C ATOM 218 O THR 16 -7.780 28.292 3.064 1.00 14.26 O ATOM 219 CB THR 16 -4.891 27.914 4.418 1.00 14.26 C ATOM 220 OG1 THR 16 -4.561 29.267 4.751 1.00 14.26 O ATOM 221 CG2 THR 16 -3.655 27.041 4.568 1.00 14.26 C ATOM 229 N GLY 17 -6.435 30.000 2.486 1.00 14.84 N ATOM 230 CA GLY 17 -7.518 30.972 2.398 1.00 14.84 C ATOM 231 C GLY 17 -7.657 31.760 3.694 1.00 14.84 C ATOM 232 O GLY 17 -8.512 32.638 3.808 1.00 14.84 O ATOM 236 N GLN 18 -6.811 31.444 4.667 1.00 13.32 N ATOM 237 CA GLN 18 -6.856 32.103 5.967 1.00 13.32 C ATOM 238 C GLN 18 -5.776 33.172 6.081 1.00 13.32 C ATOM 239 O GLN 18 -4.733 33.083 5.434 1.00 13.32 O ATOM 240 CB GLN 18 -6.698 31.078 7.094 1.00 13.32 C ATOM 241 CG GLN 18 -7.757 29.990 7.098 1.00 13.32 C ATOM 242 CD GLN 18 -9.152 30.539 7.335 1.00 13.32 C ATOM 243 OE1 GLN 18 -9.398 31.239 8.321 1.00 13.32 O ATOM 244 NE2 GLN 18 -10.072 30.226 6.430 1.00 13.32 N ATOM 253 N ASN 19 -6.034 34.180 6.905 1.00 12.03 N ATOM 254 CA ASN 19 -5.101 35.288 7.077 1.00 12.03 C ATOM 255 C ASN 19 -3.990 34.926 8.054 1.00 12.03 C ATOM 256 O ASN 19 -4.227 34.777 9.252 1.00 12.03 O ATOM 257 CB ASN 19 -5.832 36.535 7.537 1.00 12.03 C ATOM 258 CG ASN 19 -4.921 37.726 7.660 1.00 12.03 C ATOM 259 OD1 ASN 19 -3.764 37.598 8.075 1.00 12.03 O ATOM 260 ND2 ASN 19 -5.422 38.882 7.307 1.00 12.03 N ATOM 267 N TRP 20 -2.775 34.786 7.534 1.00 10.07 N ATOM 268 CA TRP 20 -1.642 34.352 8.342 1.00 10.07 C ATOM 269 C TRP 20 -1.332 35.360 9.442 1.00 10.07 C ATOM 270 O TRP 20 -1.060 34.985 10.582 1.00 10.07 O ATOM 271 CB TRP 20 -0.404 34.154 7.464 1.00 10.07 C ATOM 272 CG TRP 20 0.809 33.720 8.229 1.00 10.07 C ATOM 273 CD1 TRP 20 2.012 34.357 8.279 1.00 10.07 C ATOM 274 CD2 TRP 20 0.944 32.543 9.063 1.00 10.07 C ATOM 275 NE1 TRP 20 2.883 33.661 9.081 1.00 10.07 N ATOM 276 CE2 TRP 20 2.245 32.549 9.570 1.00 10.07 C ATOM 277 CE3 TRP 20 0.076 31.501 9.414 1.00 10.07 C ATOM 278 CZ2 TRP 20 2.709 31.551 10.412 1.00 10.07 C ATOM 279 CZ3 TRP 20 0.541 30.500 10.259 1.00 10.07 C ATOM 280 CH2 TRP 20 1.824 30.526 10.746 1.00 10.07 C ATOM 291 N ALA 21 -1.375 36.641 9.093 1.00 9.51 N ATOM 292 CA ALA 21 -1.061 37.704 10.040 1.00 9.51 C ATOM 293 C ALA 21 -2.042 37.710 11.205 1.00 9.51 C ATOM 294 O ALA 21 -1.648 37.882 12.359 1.00 9.51 O ATOM 295 CB ALA 21 -1.064 39.056 9.339 1.00 9.51 C ATOM 301 N SER 22 -3.321 37.524 10.897 1.00 10.35 N ATOM 302 CA SER 22 -4.356 37.474 11.922 1.00 10.35 C ATOM 303 C SER 22 -4.161 36.278 12.845 1.00 10.35 C ATOM 304 O SER 22 -4.258 36.401 14.066 1.00 10.35 O ATOM 305 CB SER 22 -5.726 37.408 11.277 1.00 10.35 C ATOM 306 OG SER 22 -6.737 37.366 12.247 1.00 10.35 O ATOM 312 N LEU 23 -3.884 35.120 12.254 1.00 9.59 N ATOM 313 CA LEU 23 -3.640 33.906 13.024 1.00 9.59 C ATOM 314 C LEU 23 -2.408 34.053 13.908 1.00 9.59 C ATOM 315 O LEU 23 -2.449 33.756 15.101 1.00 9.59 O ATOM 316 CB LEU 23 -3.463 32.708 12.083 1.00 9.59 C ATOM 317 CG LEU 23 -3.129 31.373 12.761 1.00 9.59 C ATOM 318 CD1 LEU 23 -4.240 31.006 13.735 1.00 9.59 C ATOM 319 CD2 LEU 23 -2.951 30.296 11.702 1.00 9.59 C ATOM 331 N ALA 24 -1.313 34.514 13.314 1.00 7.71 N ATOM 332 CA ALA 24 -0.075 34.735 14.054 1.00 7.71 C ATOM 333 C ALA 24 -0.276 35.752 15.171 1.00 7.71 C ATOM 334 O ALA 24 0.256 35.594 16.269 1.00 7.71 O ATOM 335 CB ALA 24 1.030 35.193 13.114 1.00 7.71 C ATOM 341 N ALA 25 -1.046 36.796 14.882 1.00 8.15 N ATOM 342 CA ALA 25 -1.380 37.801 15.885 1.00 8.15 C ATOM 343 C ALA 25 -2.177 37.191 17.030 1.00 8.15 C ATOM 344 O ALA 25 -1.951 37.516 18.196 1.00 8.15 O ATOM 345 CB ALA 25 -2.159 38.944 15.248 1.00 8.15 C ATOM 351 N ASN 26 -3.109 36.307 16.693 1.00 8.85 N ATOM 352 CA ASN 26 -3.904 35.610 17.696 1.00 8.85 C ATOM 353 C ASN 26 -3.028 34.731 18.580 1.00 8.85 C ATOM 354 O ASN 26 -3.250 34.630 19.787 1.00 8.85 O ATOM 355 CB ASN 26 -4.994 34.785 17.036 1.00 8.85 C ATOM 356 CG ASN 26 -5.933 34.165 18.033 1.00 8.85 C ATOM 357 OD1 ASN 26 -6.482 34.854 18.899 1.00 8.85 O ATOM 358 ND2 ASN 26 -6.127 32.875 17.927 1.00 8.85 N ATOM 365 N GLU 27 -2.030 34.097 17.972 1.00 7.80 N ATOM 366 CA GLU 27 -1.114 33.232 18.705 1.00 7.80 C ATOM 367 C GLU 27 -0.203 34.043 19.618 1.00 7.80 C ATOM 368 O GLU 27 0.088 33.633 20.743 1.00 7.80 O ATOM 369 CB GLU 27 -0.270 32.404 17.733 1.00 7.80 C ATOM 370 CG GLU 27 -1.050 31.343 16.971 1.00 7.80 C ATOM 371 CD GLU 27 -0.204 30.594 15.978 1.00 7.80 C ATOM 372 OE1 GLU 27 0.925 30.974 15.783 1.00 7.80 O ATOM 373 OE2 GLU 27 -0.688 29.640 15.415 1.00 7.80 O ATOM 380 N LEU 28 0.244 35.194 19.129 1.00 6.87 N ATOM 381 CA LEU 28 1.161 36.041 19.882 1.00 6.87 C ATOM 382 C LEU 28 0.405 37.013 20.778 1.00 6.87 C ATOM 383 O LEU 28 1.006 37.748 21.561 1.00 6.87 O ATOM 384 CB LEU 28 2.070 36.822 18.923 1.00 6.87 C ATOM 385 CG LEU 28 3.003 35.972 18.052 1.00 6.87 C ATOM 386 CD1 LEU 28 3.758 36.876 17.085 1.00 6.87 C ATOM 387 CD2 LEU 28 3.965 35.199 18.941 1.00 6.87 C ATOM 399 N ARG 29 -0.918 37.012 20.658 1.00 8.31 N ATOM 400 CA ARG 29 -1.760 37.909 21.441 1.00 8.31 C ATOM 401 C ARG 29 -1.480 39.367 21.099 1.00 8.31 C ATOM 402 O ARG 29 -1.391 40.217 21.985 1.00 8.31 O ATOM 403 CB ARG 29 -1.535 37.690 22.931 1.00 8.31 C ATOM 404 CG ARG 29 -1.622 36.241 23.383 1.00 8.31 C ATOM 405 CD ARG 29 -2.858 35.584 22.885 1.00 8.31 C ATOM 406 NE ARG 29 -4.057 36.229 23.393 1.00 8.31 N ATOM 407 CZ ARG 29 -5.225 36.308 22.724 1.00 8.31 C ATOM 408 NH1 ARG 29 -5.334 35.778 21.526 1.00 8.31 N ATOM 409 NH2 ARG 29 -6.261 36.917 23.273 1.00 8.31 N ATOM 423 N VAL 30 -1.341 39.649 19.808 1.00 11.75 N ATOM 424 CA VAL 30 -1.237 41.023 19.331 1.00 11.75 C ATOM 425 C VAL 30 -2.612 41.617 19.058 1.00 11.75 C ATOM 426 O VAL 30 -2.975 42.650 19.622 1.00 11.75 O ATOM 427 CB VAL 30 -0.392 41.079 18.044 1.00 11.75 C ATOM 428 CG1 VAL 30 -0.379 42.492 17.478 1.00 11.75 C ATOM 429 CG2 VAL 30 1.023 40.601 18.332 1.00 11.75 C ATOM 439 N THR 31 -3.374 40.960 18.191 1.00 14.39 N ATOM 440 CA THR 31 -4.745 41.369 17.911 1.00 14.39 C ATOM 441 C THR 31 -5.585 40.191 17.432 1.00 14.39 C ATOM 442 O THR 31 -5.070 39.262 16.812 1.00 14.39 O ATOM 443 CB THR 31 -4.785 42.494 16.861 1.00 14.39 C ATOM 444 OG1 THR 31 -6.136 42.940 16.686 1.00 14.39 O ATOM 445 CG2 THR 31 -4.241 41.999 15.528 1.00 14.39 C ATOM 453 N GLU 32 -6.880 40.237 17.725 1.00 17.01 N ATOM 454 CA GLU 32 -7.803 39.201 17.278 1.00 17.01 C ATOM 455 C GLU 32 -8.613 39.667 16.075 1.00 17.01 C ATOM 456 O GLU 32 -9.804 39.374 15.965 1.00 17.01 O ATOM 457 CB GLU 32 -8.746 38.799 18.415 1.00 17.01 C ATOM 458 CG GLU 32 -8.052 38.168 19.614 1.00 17.01 C ATOM 459 CD GLU 32 -9.012 37.752 20.693 1.00 17.01 C ATOM 460 OE1 GLU 32 -10.193 37.938 20.517 1.00 17.01 O ATOM 461 OE2 GLU 32 -8.565 37.245 21.695 1.00 17.01 O ATOM 468 N ARG 33 -7.960 40.394 15.175 1.00 18.13 N ATOM 469 CA ARG 33 -8.637 40.970 14.019 1.00 18.13 C ATOM 470 C ARG 33 -7.789 40.835 12.761 1.00 18.13 C ATOM 471 O ARG 33 -6.576 40.635 12.836 1.00 18.13 O ATOM 472 CB ARG 33 -8.952 42.440 14.259 1.00 18.13 C ATOM 473 CG ARG 33 -9.939 42.706 15.384 1.00 18.13 C ATOM 474 CD ARG 33 -11.310 42.257 15.028 1.00 18.13 C ATOM 475 NE ARG 33 -12.279 42.607 16.055 1.00 18.13 N ATOM 476 CZ ARG 33 -12.571 41.841 17.124 1.00 18.13 C ATOM 477 NH1 ARG 33 -11.962 40.688 17.292 1.00 18.13 N ATOM 478 NH2 ARG 33 -13.469 42.249 18.004 1.00 18.13 N ATOM 492 N PRO 34 -8.434 40.945 11.604 1.00 17.13 N ATOM 493 CA PRO 34 -7.730 40.898 10.328 1.00 17.13 C ATOM 494 C PRO 34 -6.604 41.923 10.281 1.00 17.13 C ATOM 495 O PRO 34 -6.720 43.012 10.842 1.00 17.13 O ATOM 496 CB PRO 34 -8.832 41.222 9.315 1.00 17.13 C ATOM 497 CG PRO 34 -10.086 40.757 9.977 1.00 17.13 C ATOM 498 CD PRO 34 -9.891 41.101 11.429 1.00 17.13 C ATOM 506 N PHE 35 -5.515 41.568 9.607 1.00 16.48 N ATOM 507 CA PHE 35 -4.310 42.388 9.614 1.00 16.48 C ATOM 508 C PHE 35 -3.423 42.071 8.416 1.00 16.48 C ATOM 509 O PHE 35 -3.418 40.946 7.916 1.00 16.48 O ATOM 510 CB PHE 35 -3.525 42.173 10.908 1.00 16.48 C ATOM 511 CG PHE 35 -2.655 43.338 11.289 1.00 16.48 C ATOM 512 CD1 PHE 35 -3.197 44.454 11.909 1.00 16.48 C ATOM 513 CD2 PHE 35 -1.293 43.320 11.028 1.00 16.48 C ATOM 514 CE1 PHE 35 -2.399 45.525 12.260 1.00 16.48 C ATOM 515 CE2 PHE 35 -0.492 44.389 11.379 1.00 16.48 C ATOM 516 CZ PHE 35 -1.046 45.493 11.996 1.00 16.48 C ATOM 526 N TRP 36 -2.672 43.069 7.962 1.00 15.00 N ATOM 527 CA TRP 36 -1.794 42.904 6.811 1.00 15.00 C ATOM 528 C TRP 36 -0.438 42.348 7.228 1.00 15.00 C ATOM 529 O TRP 36 0.237 42.914 8.088 1.00 15.00 O ATOM 530 CB TRP 36 -1.601 44.240 6.090 1.00 15.00 C ATOM 531 CG TRP 36 -2.838 44.731 5.402 1.00 15.00 C ATOM 532 CD1 TRP 36 -3.702 45.681 5.859 1.00 15.00 C ATOM 533 CD2 TRP 36 -3.359 44.299 4.121 1.00 15.00 C ATOM 534 NE1 TRP 36 -4.720 45.868 4.958 1.00 15.00 N ATOM 535 CE2 TRP 36 -4.526 45.032 3.887 1.00 15.00 C ATOM 536 CE3 TRP 36 -2.934 43.363 3.170 1.00 15.00 C ATOM 537 CZ2 TRP 36 -5.282 44.860 2.739 1.00 15.00 C ATOM 538 CZ3 TRP 36 -3.691 43.191 2.018 1.00 15.00 C ATOM 539 CH2 TRP 36 -4.834 43.922 1.808 1.00 15.00 C ATOM 550 N ILE 37 -0.044 41.238 6.614 1.00 13.29 N ATOM 551 CA ILE 37 1.205 40.570 6.962 1.00 13.29 C ATOM 552 C ILE 37 2.408 41.434 6.607 1.00 13.29 C ATOM 553 O ILE 37 3.464 41.330 7.231 1.00 13.29 O ATOM 554 CB ILE 37 1.319 39.211 6.248 1.00 13.29 C ATOM 555 CG1 ILE 37 2.474 38.396 6.835 1.00 13.29 C ATOM 556 CG2 ILE 37 1.509 39.410 4.752 1.00 13.29 C ATOM 557 CD1 ILE 37 2.264 37.988 8.275 1.00 13.29 C ATOM 569 N SER 38 2.243 42.287 5.601 1.00 12.76 N ATOM 570 CA SER 38 3.313 43.177 5.167 1.00 12.76 C ATOM 571 C SER 38 3.618 44.228 6.228 1.00 12.76 C ATOM 572 O SER 38 4.709 44.796 6.255 1.00 12.76 O ATOM 573 CB SER 38 2.932 43.855 3.866 1.00 12.76 C ATOM 574 OG SER 38 1.865 44.745 4.056 1.00 12.76 O ATOM 580 N SER 39 2.647 44.481 7.099 1.00 10.16 N ATOM 581 CA SER 39 2.835 45.413 8.205 1.00 10.16 C ATOM 582 C SER 39 3.053 44.672 9.518 1.00 10.16 C ATOM 583 O SER 39 3.625 45.217 10.462 1.00 10.16 O ATOM 584 CB SER 39 1.633 46.330 8.325 1.00 10.16 C ATOM 585 OG SER 39 0.478 45.605 8.644 1.00 10.16 O ATOM 591 N PHE 40 2.593 43.426 9.572 1.00 7.56 N ATOM 592 CA PHE 40 2.748 42.603 10.766 1.00 7.56 C ATOM 593 C PHE 40 4.209 42.240 10.998 1.00 7.56 C ATOM 594 O PHE 40 4.738 42.430 12.093 1.00 7.56 O ATOM 595 CB PHE 40 1.912 41.327 10.647 1.00 7.56 C ATOM 596 CG PHE 40 1.873 40.509 11.907 1.00 7.56 C ATOM 597 CD1 PHE 40 1.148 40.940 13.008 1.00 7.56 C ATOM 598 CD2 PHE 40 2.562 39.309 11.993 1.00 7.56 C ATOM 599 CE1 PHE 40 1.112 40.189 14.167 1.00 7.56 C ATOM 600 CE2 PHE 40 2.526 38.556 13.150 1.00 7.56 C ATOM 601 CZ PHE 40 1.800 38.996 14.238 1.00 7.56 C ATOM 611 N ILE 41 4.855 41.717 9.963 1.00 8.15 N ATOM 612 CA ILE 41 6.241 41.277 10.067 1.00 8.15 C ATOM 613 C ILE 41 7.196 42.463 10.084 1.00 8.15 C ATOM 614 O ILE 41 7.176 43.302 9.184 1.00 8.15 O ATOM 615 CB ILE 41 6.609 40.338 8.905 1.00 8.15 C ATOM 616 CG1 ILE 41 5.677 39.122 8.884 1.00 8.15 C ATOM 617 CG2 ILE 41 8.061 39.897 9.015 1.00 8.15 C ATOM 618 CD1 ILE 41 5.748 38.278 10.136 1.00 8.15 C ATOM 630 N GLY 42 8.033 42.528 11.115 1.00 5.89 N ATOM 631 CA GLY 42 9.009 43.604 11.241 1.00 5.89 C ATOM 632 C GLY 42 8.501 44.704 12.164 1.00 5.89 C ATOM 633 O GLY 42 9.193 45.693 12.407 1.00 5.89 O ATOM 637 N ARG 43 7.288 44.526 12.675 1.00 4.46 N ATOM 638 CA ARG 43 6.693 45.493 13.591 1.00 4.46 C ATOM 639 C ARG 43 6.097 44.803 14.810 1.00 4.46 C ATOM 640 O ARG 43 4.920 44.444 14.820 1.00 4.46 O ATOM 641 CB ARG 43 5.610 46.299 12.889 1.00 4.46 C ATOM 642 CG ARG 43 6.104 47.183 11.755 1.00 4.46 C ATOM 643 CD ARG 43 6.926 48.313 12.259 1.00 4.46 C ATOM 644 NE ARG 43 7.345 49.200 11.185 1.00 4.46 N ATOM 645 CZ ARG 43 8.466 49.041 10.455 1.00 4.46 C ATOM 646 NH1 ARG 43 9.268 48.026 10.694 1.00 4.46 N ATOM 647 NH2 ARG 43 8.760 49.904 9.497 1.00 4.46 N ATOM 661 N SER 44 6.918 44.617 15.839 1.00 4.36 N ATOM 662 CA SER 44 8.316 45.030 15.788 1.00 4.36 C ATOM 663 C SER 44 9.194 44.099 16.614 1.00 4.36 C ATOM 664 O SER 44 8.773 43.008 16.998 1.00 4.36 O ATOM 665 CB SER 44 8.458 46.453 16.291 1.00 4.36 C ATOM 666 OG SER 44 9.745 46.947 16.041 1.00 4.36 O ATOM 672 N LYS 45 10.419 44.537 16.884 1.00 3.40 N ATOM 673 CA LYS 45 11.353 43.755 17.687 1.00 3.40 C ATOM 674 C LYS 45 10.888 43.660 19.134 1.00 3.40 C ATOM 675 O LYS 45 11.413 44.344 20.012 1.00 3.40 O ATOM 676 CB LYS 45 12.754 44.364 17.624 1.00 3.40 C ATOM 677 CG LYS 45 13.346 44.435 16.223 1.00 3.40 C ATOM 678 CD LYS 45 14.723 45.085 16.237 1.00 3.40 C ATOM 679 CE LYS 45 15.226 45.348 14.826 1.00 3.40 C ATOM 680 NZ LYS 45 16.538 46.051 14.825 1.00 3.40 N TER END