####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS044_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS044_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 16 - 41 4.82 8.57 LONGEST_CONTINUOUS_SEGMENT: 26 17 - 42 4.93 8.08 LCS_AVERAGE: 53.62 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 20 - 36 1.86 14.79 LCS_AVERAGE: 25.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.99 14.37 LCS_AVERAGE: 16.89 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 18 0 3 6 6 8 12 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT V 3 V 3 5 6 21 0 5 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT Q 4 Q 4 5 6 21 2 5 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT G 5 G 5 5 6 21 2 3 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT P 6 P 6 5 6 21 3 5 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT W 7 W 7 5 6 21 3 4 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT V 8 V 8 3 6 21 3 3 4 6 8 9 11 12 14 20 23 27 32 33 36 37 39 41 41 42 LCS_GDT G 9 G 9 3 9 21 3 3 4 5 6 9 11 12 14 15 17 21 24 29 33 35 39 41 41 42 LCS_GDT S 10 S 10 8 9 21 7 7 8 8 8 9 11 12 15 20 24 28 32 33 36 37 39 41 41 42 LCS_GDT S 11 S 11 8 9 21 7 7 8 8 8 8 8 9 11 13 19 26 29 32 34 36 39 41 41 42 LCS_GDT Y 12 Y 12 8 9 21 7 7 8 8 8 8 8 12 13 14 16 17 24 26 32 35 38 41 41 42 LCS_GDT V 13 V 13 8 9 21 7 7 8 8 8 9 12 14 18 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT A 14 A 14 8 9 21 7 7 8 8 8 9 12 14 18 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT E 15 E 15 8 9 21 7 7 8 8 8 8 9 12 14 15 22 25 27 29 32 36 39 41 41 42 LCS_GDT T 16 T 16 8 9 26 7 7 8 8 8 9 11 13 15 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT G 17 G 17 8 9 26 3 7 8 8 8 8 10 14 16 21 26 29 32 33 36 37 39 41 41 42 LCS_GDT Q 18 Q 18 4 4 26 3 3 4 4 4 5 7 10 17 19 25 29 32 33 36 37 39 41 41 42 LCS_GDT N 19 N 19 4 14 26 3 3 4 9 11 13 16 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT W 20 W 20 12 17 26 7 10 11 14 16 16 17 18 20 22 24 27 32 33 36 37 39 41 41 42 LCS_GDT A 21 A 21 12 17 26 7 10 11 14 16 16 17 19 20 22 24 28 32 33 36 37 39 41 41 42 LCS_GDT S 22 S 22 12 17 26 7 10 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT L 23 L 23 12 17 26 6 10 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT A 24 A 24 12 17 26 7 10 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT A 25 A 25 12 17 26 7 10 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT N 26 N 26 12 17 26 7 10 11 14 16 16 17 18 19 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT E 27 E 27 12 17 26 5 10 11 14 16 16 17 18 19 22 25 29 32 33 36 37 39 41 41 42 LCS_GDT L 28 L 28 12 17 26 7 10 11 14 16 16 17 18 19 22 25 29 32 33 36 37 39 41 41 42 LCS_GDT R 29 R 29 12 17 26 4 10 11 14 16 16 17 18 19 22 25 29 32 33 36 37 39 41 41 42 LCS_GDT V 30 V 30 12 17 26 3 5 11 14 16 16 17 18 19 22 25 29 32 33 36 37 39 41 41 42 LCS_GDT T 31 T 31 12 17 26 3 8 11 14 16 16 17 18 19 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT E 32 E 32 7 17 26 3 4 10 14 16 16 17 18 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT R 33 R 33 4 17 26 3 3 7 13 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT P 34 P 34 3 17 26 3 3 4 5 7 9 12 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT F 35 F 35 3 17 26 3 9 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT W 36 W 36 7 17 26 4 4 6 13 16 16 17 18 18 19 25 29 32 33 36 37 39 41 41 42 LCS_GDT I 37 I 37 7 8 26 4 6 6 8 15 16 17 18 19 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT S 38 S 38 7 8 26 4 6 6 7 8 11 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT S 39 S 39 7 8 26 4 6 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT F 40 F 40 7 8 26 3 6 7 9 11 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT I 41 I 41 7 8 26 3 6 6 7 9 13 15 19 20 22 26 29 32 33 36 37 39 41 41 42 LCS_GDT G 42 G 42 7 8 26 3 6 6 7 8 10 14 18 20 22 24 28 32 33 35 37 39 41 41 42 LCS_GDT R 43 R 43 4 8 15 3 3 4 4 6 10 10 12 13 15 18 21 23 25 32 32 35 38 40 42 LCS_GDT S 44 S 44 4 5 15 0 3 4 5 8 10 10 12 12 13 13 14 16 17 22 27 29 31 34 36 LCS_GDT K 45 K 45 3 5 15 0 0 3 3 5 7 9 12 12 13 13 14 15 15 15 20 22 23 24 25 LCS_AVERAGE LCS_A: 32.04 ( 16.89 25.62 53.62 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 11 14 16 16 17 19 20 22 26 29 32 33 36 37 39 41 41 42 GDT PERCENT_AT 15.91 22.73 25.00 31.82 36.36 36.36 38.64 43.18 45.45 50.00 59.09 65.91 72.73 75.00 81.82 84.09 88.64 93.18 93.18 95.45 GDT RMS_LOCAL 0.19 0.51 0.69 1.23 1.47 1.47 1.72 2.85 2.97 3.21 3.93 4.28 4.48 4.59 4.97 5.05 5.32 5.57 5.57 5.83 GDT RMS_ALL_AT 20.57 14.53 14.65 14.44 14.58 14.58 14.10 7.37 7.44 7.44 7.10 7.20 7.01 7.02 7.30 7.19 7.13 7.12 7.12 7.01 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.974 0 0.056 0.054 4.731 16.818 15.636 - LGA V 3 V 3 2.374 0 0.631 0.518 4.437 27.273 23.377 3.231 LGA Q 4 Q 4 0.995 0 0.611 0.760 5.914 61.818 39.798 3.940 LGA G 5 G 5 1.748 0 0.251 0.251 2.700 56.364 56.364 - LGA P 6 P 6 2.084 0 0.393 0.408 4.484 36.818 29.091 3.685 LGA W 7 W 7 1.585 0 0.323 0.348 7.039 38.636 13.377 6.647 LGA V 8 V 8 6.461 0 0.051 0.289 9.573 0.455 0.260 9.417 LGA G 9 G 9 9.675 0 0.212 0.212 9.675 0.000 0.000 - LGA S 10 S 10 6.687 0 0.567 0.849 7.405 0.000 0.000 6.002 LGA S 11 S 11 8.922 0 0.058 0.611 13.186 0.000 0.000 13.186 LGA Y 12 Y 12 10.391 0 0.082 0.732 13.060 0.000 0.000 12.838 LGA V 13 V 13 5.836 0 0.041 0.139 8.000 0.000 0.000 6.371 LGA A 14 A 14 7.453 0 0.069 0.079 9.543 0.000 0.000 - LGA E 15 E 15 11.072 0 0.089 0.922 17.832 0.000 0.000 17.832 LGA T 16 T 16 8.376 0 0.161 1.126 8.938 0.000 0.000 8.621 LGA G 17 G 17 6.815 0 0.265 0.265 7.839 0.000 0.000 - LGA Q 18 Q 18 7.635 0 0.612 1.379 13.730 0.455 0.202 13.474 LGA N 19 N 19 2.879 0 0.104 1.063 6.434 21.364 16.136 6.434 LGA W 20 W 20 5.070 0 0.589 1.347 16.914 8.636 2.468 16.914 LGA A 21 A 21 4.454 0 0.036 0.048 5.569 17.727 14.182 - LGA S 22 S 22 2.738 0 0.036 0.639 6.014 36.818 25.455 6.014 LGA L 23 L 23 1.200 0 0.062 0.166 3.608 52.273 42.500 2.930 LGA A 24 A 24 3.414 0 0.026 0.036 4.961 20.455 17.455 - LGA A 25 A 25 2.910 0 0.036 0.064 5.499 15.000 25.091 - LGA N 26 N 26 6.162 0 0.044 0.820 8.977 1.364 0.682 6.550 LGA E 27 E 27 8.386 0 0.055 0.262 10.852 0.000 0.000 8.690 LGA L 28 L 28 9.235 0 0.095 0.262 10.629 0.000 0.000 8.385 LGA R 29 R 29 10.291 0 0.184 1.269 17.135 0.000 0.000 16.907 LGA V 30 V 30 8.022 0 0.052 0.191 9.011 0.000 0.000 6.786 LGA T 31 T 31 7.918 0 0.105 1.169 11.996 0.000 0.000 10.447 LGA E 32 E 32 7.182 0 0.692 0.789 8.510 0.000 0.000 8.510 LGA R 33 R 33 3.488 0 0.263 1.883 9.698 8.636 3.140 9.566 LGA P 34 P 34 4.046 0 0.208 0.245 7.617 8.636 4.935 7.617 LGA F 35 F 35 2.750 0 0.605 0.939 11.328 12.727 5.124 11.328 LGA W 36 W 36 6.782 0 0.550 1.015 17.542 1.364 0.390 17.542 LGA I 37 I 37 4.816 0 0.136 0.951 7.488 10.000 10.455 2.386 LGA S 38 S 38 4.032 0 0.179 0.667 5.881 19.091 12.727 5.881 LGA S 39 S 39 0.522 0 0.112 0.117 2.855 60.000 55.455 2.537 LGA F 40 F 40 0.906 0 0.163 0.215 6.071 63.182 32.562 6.071 LGA I 41 I 41 3.413 0 0.604 0.607 5.762 15.455 9.091 5.198 LGA G 42 G 42 5.708 0 0.408 0.408 10.037 0.455 0.455 - LGA R 43 R 43 12.252 0 0.685 1.441 19.258 0.000 0.000 19.258 LGA S 44 S 44 16.270 0 0.707 0.834 19.261 0.000 0.000 17.489 LGA K 45 K 45 21.501 0 0.060 0.862 30.260 0.000 0.000 30.260 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.875 6.824 8.824 13.905 10.373 3.792 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.85 45.455 40.297 0.643 LGA_LOCAL RMSD: 2.853 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.373 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.875 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.161061 * X + -0.943152 * Y + 0.290728 * Z + 36.798290 Y_new = 0.538956 * X + -0.162723 * Y + -0.826467 * Z + 64.556816 Z_new = 0.826793 * X + 0.289801 * Y + 0.482109 * Z + -97.152016 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.280405 -0.973382 0.541237 [DEG: 73.3618 -55.7707 31.0106 ] ZXZ: 0.338253 1.067736 1.233665 [DEG: 19.3805 61.1768 70.6838 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS044_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS044_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.85 40.297 6.87 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS044_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 7.397 37.521 13.333 1.00 4.07 ATOM 19 CA ALA 2 7.166 37.730 11.907 1.00 4.07 ATOM 21 CB ALA 2 8.191 38.757 11.399 1.00 4.07 ATOM 25 C ALA 2 7.190 36.441 11.072 1.00 4.07 ATOM 26 O ALA 2 7.874 35.472 11.410 1.00 4.07 ATOM 27 N VAL 3 6.539 36.491 9.901 1.00 4.23 ATOM 29 CA VAL 3 6.741 35.553 8.769 1.00 4.23 ATOM 31 CB VAL 3 5.564 35.644 7.756 1.00 4.23 ATOM 33 CG1 VAL 3 5.534 34.480 6.752 1.00 4.23 ATOM 37 CG2 VAL 3 4.192 35.610 8.457 1.00 4.23 ATOM 41 C VAL 3 8.116 35.788 8.105 1.00 4.23 ATOM 42 O VAL 3 8.530 35.035 7.230 1.00 4.23 ATOM 43 N GLN 4 8.848 36.820 8.557 1.00 3.81 ATOM 45 CA GLN 4 10.253 37.145 8.234 1.00 3.81 ATOM 47 CB GLN 4 11.180 36.102 8.901 1.00 3.81 ATOM 50 CG GLN 4 11.140 36.218 10.432 1.00 3.81 ATOM 53 CD GLN 4 11.493 34.908 11.123 1.00 3.81 ATOM 54 OE1 GLN 4 12.633 34.481 11.151 1.00 3.81 ATOM 55 NE2 GLN 4 10.537 34.227 11.712 1.00 3.81 ATOM 58 C GLN 4 10.516 37.333 6.739 1.00 3.81 ATOM 59 O GLN 4 11.650 37.280 6.276 1.00 3.81 ATOM 60 N GLY 5 9.456 37.551 5.943 1.00 3.07 ATOM 62 CA GLY 5 9.442 37.073 4.568 1.00 3.07 ATOM 65 C GLY 5 9.672 38.165 3.524 1.00 3.07 ATOM 66 O GLY 5 8.772 39.033 3.336 1.00 3.07 ATOM 67 N PRO 6 10.709 38.089 2.732 1.00 2.43 ATOM 68 CD PRO 6 12.047 37.617 3.145 1.00 2.43 ATOM 71 CG PRO 6 12.895 37.521 1.885 1.00 2.43 ATOM 74 CB PRO 6 12.122 38.384 0.886 1.00 2.43 ATOM 77 CA PRO 6 10.662 38.185 1.272 1.00 2.43 ATOM 79 C PRO 6 10.057 36.872 0.712 1.00 2.43 ATOM 80 O PRO 6 10.717 36.125 -0.016 1.00 2.43 ATOM 81 N TRP 7 8.831 36.519 1.102 1.00 2.74 ATOM 83 CA TRP 7 8.100 35.329 0.626 1.00 2.74 ATOM 85 CB TRP 7 7.881 35.406 -0.905 1.00 2.74 ATOM 88 CG TRP 7 7.448 36.730 -1.481 1.00 2.74 ATOM 89 CD1 TRP 7 8.273 37.750 -1.816 1.00 2.74 ATOM 91 NE1 TRP 7 7.536 38.806 -2.315 1.00 2.74 ATOM 93 CE2 TRP 7 6.211 38.469 -2.459 1.00 2.74 ATOM 94 CZ2 TRP 7 5.107 39.143 -3.004 1.00 2.74 ATOM 96 CH2 TRP 7 3.847 38.526 -2.970 1.00 2.74 ATOM 98 CZ3 TRP 7 3.702 37.264 -2.369 1.00 2.74 ATOM 100 CE3 TRP 7 4.819 36.597 -1.828 1.00 2.74 ATOM 102 CD2 TRP 7 6.108 37.170 -1.876 1.00 2.74 ATOM 103 C TRP 7 8.625 33.943 1.055 1.00 2.74 ATOM 104 O TRP 7 8.032 32.952 0.657 1.00 2.74 ATOM 105 N VAL 8 9.704 33.849 1.853 1.00 2.43 ATOM 107 CA VAL 8 10.350 32.616 2.408 1.00 2.43 ATOM 109 CB VAL 8 9.424 31.801 3.350 1.00 2.43 ATOM 111 CG1 VAL 8 10.221 30.888 4.296 1.00 2.43 ATOM 115 CG2 VAL 8 8.558 32.695 4.252 1.00 2.43 ATOM 119 C VAL 8 11.052 31.721 1.368 1.00 2.43 ATOM 120 O VAL 8 11.963 30.966 1.703 1.00 2.43 ATOM 121 N GLY 9 10.662 31.783 0.093 1.00 2.55 ATOM 123 CA GLY 9 10.741 30.608 -0.774 1.00 2.55 ATOM 126 C GLY 9 9.878 29.550 -0.199 1.00 2.55 ATOM 127 O GLY 9 8.691 29.654 -0.482 1.00 2.55 ATOM 128 N SER 10 10.462 28.613 0.567 1.00 2.43 ATOM 130 CA SER 10 9.815 27.344 0.903 1.00 2.43 ATOM 132 CB SER 10 10.453 26.653 2.094 1.00 2.43 ATOM 135 OG SER 10 10.152 25.273 2.035 1.00 2.43 ATOM 137 C SER 10 8.311 27.454 1.006 1.00 2.43 ATOM 138 O SER 10 7.810 27.878 2.043 1.00 2.43 ATOM 139 N SER 11 7.610 27.228 -0.118 1.00 2.68 ATOM 141 CA SER 11 6.279 27.838 -0.295 1.00 2.68 ATOM 143 CB SER 11 5.772 27.666 -1.731 1.00 2.68 ATOM 146 OG SER 11 5.548 26.303 -2.060 1.00 2.68 ATOM 148 C SER 11 5.305 27.273 0.753 1.00 2.68 ATOM 149 O SER 11 4.406 27.958 1.230 1.00 2.68 ATOM 150 N TYR 12 5.582 26.041 1.187 1.00 2.76 ATOM 152 CA TYR 12 5.019 25.391 2.362 1.00 2.76 ATOM 154 CB TYR 12 5.598 23.959 2.434 1.00 2.76 ATOM 157 CG TYR 12 5.745 23.376 3.830 1.00 2.76 ATOM 158 CD1 TYR 12 4.608 23.182 4.639 1.00 2.76 ATOM 160 CE1 TYR 12 4.758 22.756 5.974 1.00 2.76 ATOM 162 CZ TYR 12 6.043 22.506 6.498 1.00 2.76 ATOM 163 OH TYR 12 6.176 22.133 7.797 1.00 2.76 ATOM 165 CE2 TYR 12 7.177 22.652 5.670 1.00 2.76 ATOM 167 CD2 TYR 12 7.028 23.097 4.344 1.00 2.76 ATOM 169 C TYR 12 5.211 26.145 3.697 1.00 2.76 ATOM 170 O TYR 12 4.260 26.311 4.458 1.00 2.76 ATOM 171 N VAL 13 6.426 26.604 3.988 1.00 2.84 ATOM 173 CA VAL 13 6.792 27.352 5.200 1.00 2.84 ATOM 175 CB VAL 13 8.322 27.448 5.343 1.00 2.84 ATOM 177 CG1 VAL 13 8.727 28.010 6.711 1.00 2.84 ATOM 181 CG2 VAL 13 8.975 26.070 5.202 1.00 2.84 ATOM 185 C VAL 13 6.169 28.752 5.178 1.00 2.84 ATOM 186 O VAL 13 5.699 29.240 6.203 1.00 2.84 ATOM 187 N ALA 14 6.110 29.375 3.994 1.00 2.97 ATOM 189 CA ALA 14 5.419 30.646 3.782 1.00 2.97 ATOM 191 CB ALA 14 5.649 31.097 2.333 1.00 2.97 ATOM 195 C ALA 14 3.917 30.542 4.088 1.00 2.97 ATOM 196 O ALA 14 3.407 31.315 4.900 1.00 2.97 ATOM 197 N GLU 15 3.226 29.568 3.482 1.00 3.00 ATOM 199 CA GLU 15 1.797 29.354 3.717 1.00 3.00 ATOM 201 CB GLU 15 1.250 28.278 2.767 1.00 3.00 ATOM 204 CG GLU 15 -0.275 28.404 2.629 1.00 3.00 ATOM 207 CD GLU 15 -0.950 27.039 2.480 1.00 3.00 ATOM 208 OE1 GLU 15 -1.886 26.788 3.274 1.00 3.00 ATOM 209 OE2 GLU 15 -0.502 26.263 1.606 1.00 3.00 ATOM 210 C GLU 15 1.504 28.987 5.182 1.00 3.00 ATOM 211 O GLU 15 0.696 29.640 5.836 1.00 3.00 ATOM 212 N THR 16 2.232 28.013 5.736 1.00 2.74 ATOM 214 CA THR 16 2.104 27.560 7.131 1.00 2.74 ATOM 216 CB THR 16 3.075 26.415 7.456 1.00 2.74 ATOM 218 CG2 THR 16 2.886 25.840 8.860 1.00 2.74 ATOM 222 OG1 THR 16 2.850 25.353 6.567 1.00 2.74 ATOM 224 C THR 16 2.285 28.705 8.129 1.00 2.74 ATOM 225 O THR 16 1.491 28.849 9.061 1.00 2.74 ATOM 226 N GLY 17 3.285 29.563 7.905 1.00 2.98 ATOM 228 CA GLY 17 3.503 30.783 8.673 1.00 2.98 ATOM 231 C GLY 17 2.344 31.770 8.558 1.00 2.98 ATOM 232 O GLY 17 1.882 32.282 9.579 1.00 2.98 ATOM 233 N GLN 18 1.821 32.009 7.351 1.00 2.71 ATOM 235 CA GLN 18 0.725 32.958 7.136 1.00 2.71 ATOM 237 CB GLN 18 0.520 33.141 5.621 1.00 2.71 ATOM 240 CG GLN 18 -0.316 34.383 5.278 1.00 2.71 ATOM 243 CD GLN 18 0.365 35.675 5.723 1.00 2.71 ATOM 244 OE1 GLN 18 1.525 35.932 5.456 1.00 2.71 ATOM 245 NE2 GLN 18 -0.309 36.525 6.462 1.00 2.71 ATOM 248 C GLN 18 -0.571 32.513 7.845 1.00 2.71 ATOM 249 O GLN 18 -1.244 33.312 8.516 1.00 2.71 ATOM 250 N ASN 19 -0.879 31.217 7.750 1.00 2.63 ATOM 252 CA ASN 19 -1.984 30.549 8.434 1.00 2.63 ATOM 254 CB ASN 19 -2.032 29.075 7.993 1.00 2.63 ATOM 257 CG ASN 19 -2.534 28.892 6.572 1.00 2.63 ATOM 258 OD1 ASN 19 -3.441 29.578 6.134 1.00 2.63 ATOM 259 ND2 ASN 19 -1.981 27.943 5.856 1.00 2.63 ATOM 262 C ASN 19 -1.851 30.659 9.961 1.00 2.63 ATOM 263 O ASN 19 -2.789 31.092 10.632 1.00 2.63 ATOM 264 N TRP 20 -0.674 30.328 10.507 1.00 2.55 ATOM 266 CA TRP 20 -0.363 30.448 11.937 1.00 2.55 ATOM 268 CB TRP 20 1.085 29.985 12.165 1.00 2.55 ATOM 271 CG TRP 20 1.692 30.408 13.467 1.00 2.55 ATOM 272 CD1 TRP 20 1.441 29.848 14.671 1.00 2.55 ATOM 274 NE1 TRP 20 2.128 30.535 15.653 1.00 2.55 ATOM 276 CE2 TRP 20 2.859 31.580 15.128 1.00 2.55 ATOM 277 CZ2 TRP 20 3.692 32.551 15.703 1.00 2.55 ATOM 279 CH2 TRP 20 4.299 33.511 14.875 1.00 2.55 ATOM 281 CZ3 TRP 20 4.067 33.484 13.488 1.00 2.55 ATOM 283 CE3 TRP 20 3.229 32.504 12.922 1.00 2.55 ATOM 285 CD2 TRP 20 2.604 31.523 13.726 1.00 2.55 ATOM 286 C TRP 20 -0.580 31.863 12.481 1.00 2.55 ATOM 287 O TRP 20 -1.287 32.036 13.476 1.00 2.55 ATOM 288 N ALA 21 -0.036 32.883 11.810 1.00 2.50 ATOM 290 CA ALA 21 -0.241 34.266 12.231 1.00 2.50 ATOM 292 CB ALA 21 0.653 35.166 11.369 1.00 2.50 ATOM 296 C ALA 21 -1.725 34.675 12.179 1.00 2.50 ATOM 297 O ALA 21 -2.204 35.368 13.080 1.00 2.50 ATOM 298 N SER 22 -2.465 34.226 11.154 1.00 3.04 ATOM 300 CA SER 22 -3.890 34.568 10.993 1.00 3.04 ATOM 302 CB SER 22 -4.380 34.153 9.607 1.00 3.04 ATOM 305 OG SER 22 -3.575 34.787 8.627 1.00 3.04 ATOM 307 C SER 22 -4.761 33.972 12.107 1.00 3.04 ATOM 308 O SER 22 -5.604 34.666 12.682 1.00 3.04 ATOM 309 N LEU 23 -4.491 32.716 12.475 1.00 3.21 ATOM 311 CA LEU 23 -5.116 32.060 13.621 1.00 3.21 ATOM 313 CB LEU 23 -4.714 30.576 13.652 1.00 3.21 ATOM 316 CG LEU 23 -5.319 29.733 12.513 1.00 3.21 ATOM 318 CD1 LEU 23 -4.676 28.347 12.506 1.00 3.21 ATOM 322 CD2 LEU 23 -6.832 29.553 12.653 1.00 3.21 ATOM 326 C LEU 23 -4.768 32.750 14.945 1.00 3.21 ATOM 327 O LEU 23 -5.666 32.990 15.741 1.00 3.21 ATOM 328 N ALA 24 -3.508 33.138 15.168 1.00 2.94 ATOM 330 CA ALA 24 -3.112 33.862 16.381 1.00 2.94 ATOM 332 CB ALA 24 -1.585 34.013 16.380 1.00 2.94 ATOM 336 C ALA 24 -3.819 35.218 16.537 1.00 2.94 ATOM 337 O ALA 24 -4.281 35.557 17.623 1.00 2.94 ATOM 338 N ALA 25 -3.954 35.986 15.455 1.00 3.09 ATOM 340 CA ALA 25 -4.683 37.253 15.470 1.00 3.09 ATOM 342 CB ALA 25 -4.434 37.922 14.127 1.00 3.09 ATOM 346 C ALA 25 -6.180 37.086 15.749 1.00 3.09 ATOM 347 O ALA 25 -6.710 37.707 16.676 1.00 3.09 ATOM 348 N ASN 26 -6.866 36.230 14.983 1.00 3.70 ATOM 350 CA ASN 26 -8.302 36.079 15.197 1.00 3.70 ATOM 352 CB ASN 26 -8.984 35.562 13.921 1.00 3.70 ATOM 355 CG ASN 26 -9.292 36.742 12.998 1.00 3.70 ATOM 356 OD1 ASN 26 -8.533 37.114 12.118 1.00 3.70 ATOM 357 ND2 ASN 26 -10.406 37.404 13.224 1.00 3.70 ATOM 360 C ASN 26 -8.656 35.384 16.524 1.00 3.70 ATOM 361 O ASN 26 -9.681 35.734 17.099 1.00 3.70 ATOM 362 N GLU 27 -7.785 34.547 17.099 1.00 4.11 ATOM 364 CA GLU 27 -7.903 34.048 18.484 1.00 4.11 ATOM 366 CB GLU 27 -6.964 32.846 18.707 1.00 4.11 ATOM 369 CG GLU 27 -7.464 31.543 18.057 1.00 4.11 ATOM 372 CD GLU 27 -8.775 31.067 18.693 1.00 4.11 ATOM 373 OE1 GLU 27 -9.804 30.959 17.995 1.00 4.11 ATOM 374 OE2 GLU 27 -8.839 30.921 19.934 1.00 4.11 ATOM 375 C GLU 27 -7.620 35.118 19.556 1.00 4.11 ATOM 376 O GLU 27 -8.276 35.128 20.601 1.00 4.11 ATOM 377 N LEU 28 -6.719 36.070 19.287 1.00 3.91 ATOM 379 CA LEU 28 -6.593 37.314 20.060 1.00 3.91 ATOM 381 CB LEU 28 -5.271 38.028 19.711 1.00 3.91 ATOM 384 CG LEU 28 -4.030 37.360 20.335 1.00 3.91 ATOM 386 CD1 LEU 28 -2.760 37.871 19.652 1.00 3.91 ATOM 390 CD2 LEU 28 -3.900 37.678 21.830 1.00 3.91 ATOM 394 C LEU 28 -7.811 38.242 19.903 1.00 3.91 ATOM 395 O LEU 28 -7.917 39.201 20.666 1.00 3.91 ATOM 396 N ARG 29 -8.753 37.945 18.988 1.00 3.74 ATOM 398 CA ARG 29 -10.161 38.425 19.006 1.00 3.74 ATOM 400 CB ARG 29 -10.950 37.724 20.134 1.00 3.74 ATOM 403 CG ARG 29 -11.271 36.277 19.742 1.00 3.74 ATOM 406 CD ARG 29 -11.879 35.445 20.874 1.00 3.74 ATOM 409 NE ARG 29 -12.164 34.079 20.394 1.00 3.74 ATOM 411 CZ ARG 29 -11.324 33.058 20.362 1.00 3.74 ATOM 412 NH1 ARG 29 -11.655 31.956 19.760 1.00 3.74 ATOM 415 NH2 ARG 29 -10.143 33.083 20.896 1.00 3.74 ATOM 418 C ARG 29 -10.386 39.943 18.982 1.00 3.74 ATOM 419 O ARG 29 -11.527 40.402 18.941 1.00 3.74 ATOM 420 N VAL 30 -9.327 40.720 18.802 1.00 3.43 ATOM 422 CA VAL 30 -9.348 41.788 17.798 1.00 3.43 ATOM 424 CB VAL 30 -7.963 42.459 17.725 1.00 3.43 ATOM 426 CG1 VAL 30 -7.987 43.714 16.857 1.00 3.43 ATOM 430 CG2 VAL 30 -7.478 42.910 19.112 1.00 3.43 ATOM 434 C VAL 30 -9.819 41.110 16.498 1.00 3.43 ATOM 435 O VAL 30 -9.211 40.133 16.063 1.00 3.43 ATOM 436 N THR 31 -11.012 41.451 16.005 1.00 3.64 ATOM 438 CA THR 31 -11.829 40.532 15.178 1.00 3.64 ATOM 440 CB THR 31 -13.220 40.317 15.819 1.00 3.64 ATOM 442 CG2 THR 31 -14.218 39.553 14.945 1.00 3.64 ATOM 446 OG1 THR 31 -13.119 39.539 16.990 1.00 3.64 ATOM 448 C THR 31 -11.975 40.998 13.732 1.00 3.64 ATOM 449 O THR 31 -12.035 40.169 12.825 1.00 3.64 ATOM 450 N GLU 32 -11.979 42.312 13.511 1.00 4.13 ATOM 452 CA GLU 32 -12.156 42.997 12.221 1.00 4.13 ATOM 454 CB GLU 32 -12.150 44.523 12.451 1.00 4.13 ATOM 457 CG GLU 32 -10.769 45.157 12.719 1.00 4.13 ATOM 460 CD GLU 32 -9.963 44.402 13.783 1.00 4.13 ATOM 461 OE1 GLU 32 -10.499 44.212 14.900 1.00 4.13 ATOM 462 OE2 GLU 32 -8.875 43.889 13.437 1.00 4.13 ATOM 463 C GLU 32 -11.162 42.599 11.116 1.00 4.13 ATOM 464 O GLU 32 -11.470 42.812 9.945 1.00 4.13 ATOM 465 N ARG 33 -10.007 42.030 11.509 1.00 3.79 ATOM 467 CA ARG 33 -8.975 41.291 10.750 1.00 3.79 ATOM 469 CB ARG 33 -9.273 41.212 9.240 1.00 3.79 ATOM 472 CG ARG 33 -8.339 40.283 8.454 1.00 3.79 ATOM 475 CD ARG 33 -8.388 40.668 6.962 1.00 3.79 ATOM 478 NE ARG 33 -7.065 40.647 6.310 1.00 3.79 ATOM 480 CZ ARG 33 -6.016 41.397 6.612 1.00 3.79 ATOM 481 NH1 ARG 33 -4.949 41.354 5.870 1.00 3.79 ATOM 484 NH2 ARG 33 -5.948 42.208 7.629 1.00 3.79 ATOM 487 C ARG 33 -7.577 41.841 11.079 1.00 3.79 ATOM 488 O ARG 33 -7.020 42.563 10.247 1.00 3.79 ATOM 489 N PRO 34 -6.995 41.517 12.256 1.00 3.60 ATOM 490 CD PRO 34 -7.459 40.507 13.200 1.00 3.60 ATOM 493 CG PRO 34 -6.779 40.848 14.525 1.00 3.60 ATOM 496 CB PRO 34 -5.494 41.566 14.139 1.00 3.60 ATOM 499 CA PRO 34 -5.976 42.334 12.915 1.00 3.60 ATOM 501 C PRO 34 -4.826 42.889 12.041 1.00 3.60 ATOM 502 O PRO 34 -4.027 42.199 11.367 1.00 3.60 ATOM 503 N PHE 35 -4.678 44.207 12.172 1.00 3.66 ATOM 505 CA PHE 35 -3.517 44.924 11.676 1.00 3.66 ATOM 507 CB PHE 35 -3.574 46.392 12.126 1.00 3.66 ATOM 510 CG PHE 35 -2.361 47.196 11.688 1.00 3.66 ATOM 511 CD1 PHE 35 -2.299 47.733 10.387 1.00 3.66 ATOM 513 CE1 PHE 35 -1.145 48.412 9.958 1.00 3.66 ATOM 515 CZ PHE 35 -0.049 48.559 10.826 1.00 3.66 ATOM 517 CE2 PHE 35 -0.110 48.032 12.129 1.00 3.66 ATOM 519 CD2 PHE 35 -1.265 47.355 12.560 1.00 3.66 ATOM 521 C PHE 35 -2.199 44.267 12.105 1.00 3.66 ATOM 522 O PHE 35 -1.302 44.159 11.279 1.00 3.66 ATOM 523 N TRP 36 -2.112 43.754 13.337 1.00 3.47 ATOM 525 CA TRP 36 -0.932 43.057 13.858 1.00 3.47 ATOM 527 CB TRP 36 -1.217 42.543 15.280 1.00 3.47 ATOM 530 CG TRP 36 -1.780 43.516 16.277 1.00 3.47 ATOM 531 CD1 TRP 36 -1.644 44.863 16.257 1.00 3.47 ATOM 533 NE1 TRP 36 -2.305 45.412 17.339 1.00 3.47 ATOM 535 CE2 TRP 36 -2.865 44.443 18.141 1.00 3.47 ATOM 536 CZ2 TRP 36 -3.586 44.497 19.342 1.00 3.47 ATOM 538 CH2 TRP 36 -4.013 43.297 19.935 1.00 3.47 ATOM 540 CZ3 TRP 36 -3.726 42.069 19.315 1.00 3.47 ATOM 542 CE3 TRP 36 -3.001 42.028 18.107 1.00 3.47 ATOM 544 CD2 TRP 36 -2.549 43.215 17.487 1.00 3.47 ATOM 545 C TRP 36 -0.471 41.913 12.941 1.00 3.47 ATOM 546 O TRP 36 0.625 42.021 12.375 1.00 3.47 ATOM 547 N ILE 37 -1.324 40.890 12.713 1.00 3.08 ATOM 549 CA ILE 37 -0.987 39.790 11.789 1.00 3.08 ATOM 551 CB ILE 37 -2.085 38.722 11.568 1.00 3.08 ATOM 553 CG2 ILE 37 -3.501 39.267 11.340 1.00 3.08 ATOM 557 CG1 ILE 37 -1.735 37.717 10.442 1.00 3.08 ATOM 560 CD1 ILE 37 -2.207 37.995 9.005 1.00 3.08 ATOM 564 C ILE 37 -0.505 40.338 10.461 1.00 3.08 ATOM 565 O ILE 37 0.553 39.933 9.986 1.00 3.08 ATOM 566 N SER 38 -1.245 41.293 9.891 1.00 3.20 ATOM 568 CA SER 38 -0.850 41.796 8.563 1.00 3.20 ATOM 570 CB SER 38 -1.858 42.864 8.115 1.00 3.20 ATOM 573 OG SER 38 -3.201 42.408 8.253 1.00 3.20 ATOM 575 C SER 38 0.593 42.374 8.555 1.00 3.20 ATOM 576 O SER 38 1.469 41.963 7.779 1.00 3.20 ATOM 577 N SER 39 0.858 43.263 9.517 1.00 3.29 ATOM 579 CA SER 39 2.152 43.915 9.711 1.00 3.29 ATOM 581 CB SER 39 2.098 44.933 10.860 1.00 3.29 ATOM 584 OG SER 39 2.131 44.330 12.143 1.00 3.29 ATOM 586 C SER 39 3.300 42.922 9.912 1.00 3.29 ATOM 587 O SER 39 4.424 43.209 9.501 1.00 3.29 ATOM 588 N PHE 40 3.021 41.722 10.446 1.00 3.32 ATOM 590 CA PHE 40 4.048 40.688 10.617 1.00 3.32 ATOM 592 CB PHE 40 3.467 39.526 11.454 1.00 3.32 ATOM 595 CG PHE 40 2.935 39.814 12.853 1.00 3.32 ATOM 596 CD1 PHE 40 2.142 38.835 13.483 1.00 3.32 ATOM 598 CE1 PHE 40 1.636 39.045 14.777 1.00 3.32 ATOM 600 CZ PHE 40 1.931 40.236 15.460 1.00 3.32 ATOM 602 CE2 PHE 40 2.740 41.209 14.851 1.00 3.32 ATOM 604 CD2 PHE 40 3.251 40.995 13.556 1.00 3.32 ATOM 606 C PHE 40 4.677 40.131 9.308 1.00 3.32 ATOM 607 O PHE 40 5.542 39.255 9.407 1.00 3.32 ATOM 608 N ILE 41 4.301 40.569 8.090 1.00 3.54 ATOM 610 CA ILE 41 4.958 40.036 6.856 1.00 3.54 ATOM 612 CB ILE 41 4.052 40.314 5.628 1.00 3.54 ATOM 614 CG2 ILE 41 4.729 39.926 4.300 1.00 3.54 ATOM 618 CG1 ILE 41 2.726 39.519 5.773 1.00 3.54 ATOM 621 CD1 ILE 41 1.643 39.898 4.757 1.00 3.54 ATOM 625 C ILE 41 6.425 40.490 6.662 1.00 3.54 ATOM 626 O ILE 41 7.294 39.668 6.337 1.00 3.54 ATOM 627 N GLY 42 6.737 41.773 6.883 1.00 3.36 ATOM 629 CA GLY 42 8.093 42.348 6.782 1.00 3.36 ATOM 632 C GLY 42 8.493 42.766 5.368 1.00 3.36 ATOM 633 O GLY 42 8.316 43.932 5.041 1.00 3.36 ATOM 634 N ARG 43 9.050 41.859 4.537 1.00 3.31 ATOM 636 CA ARG 43 9.336 42.084 3.085 1.00 3.31 ATOM 638 CB ARG 43 7.941 42.033 2.426 1.00 3.31 ATOM 641 CG ARG 43 7.874 41.552 0.978 1.00 3.31 ATOM 644 CD ARG 43 6.584 40.741 0.730 1.00 3.31 ATOM 647 NE ARG 43 5.326 41.461 1.062 1.00 3.31 ATOM 649 CZ ARG 43 4.159 41.261 0.463 1.00 3.31 ATOM 650 NH1 ARG 43 3.115 41.994 0.696 1.00 3.31 ATOM 653 NH2 ARG 43 4.004 40.321 -0.417 1.00 3.31 ATOM 656 C ARG 43 10.190 43.319 2.689 1.00 3.31 ATOM 657 O ARG 43 10.430 43.566 1.510 1.00 3.31 ATOM 658 N SER 44 10.712 44.060 3.672 1.00 3.21 ATOM 660 CA SER 44 11.381 45.379 3.595 1.00 3.21 ATOM 662 CB SER 44 12.698 45.345 2.805 1.00 3.21 ATOM 665 OG SER 44 12.495 45.281 1.408 1.00 3.21 ATOM 667 C SER 44 10.473 46.557 3.194 1.00 3.21 ATOM 668 O SER 44 10.889 47.707 3.339 1.00 3.21 ATOM 669 N LYS 45 9.262 46.285 2.690 1.00 2.83 ATOM 671 CA LYS 45 8.320 47.216 2.037 1.00 2.83 ATOM 673 CB LYS 45 8.758 47.410 0.562 1.00 2.83 ATOM 676 CG LYS 45 10.202 47.934 0.416 1.00 2.83 ATOM 679 CD LYS 45 10.603 48.337 -0.999 1.00 2.83 ATOM 682 CE LYS 45 11.136 47.108 -1.736 1.00 2.83 ATOM 685 NZ LYS 45 11.629 47.503 -3.065 1.00 2.83 ATOM 689 C LYS 45 6.921 46.608 2.073 1.00 2.83 ATOM 690 O LYS 45 6.796 45.404 2.305 1.00 2.83 TER END