####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS071_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS071_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 18 - 42 4.94 9.52 LONGEST_CONTINUOUS_SEGMENT: 25 19 - 43 4.97 10.27 LCS_AVERAGE: 53.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 20 - 34 1.99 10.37 LCS_AVERAGE: 25.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 9 - 18 0.85 16.94 LCS_AVERAGE: 15.55 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 17 3 3 5 7 8 9 10 11 12 12 14 15 16 16 20 20 26 27 30 31 LCS_GDT V 3 V 3 4 8 17 3 4 5 7 8 9 10 11 13 15 17 19 22 25 28 32 34 36 36 37 LCS_GDT Q 4 Q 4 4 8 17 3 3 4 7 8 9 11 12 14 17 17 20 23 28 32 34 34 36 36 37 LCS_GDT G 5 G 5 4 8 22 0 3 4 7 8 9 10 11 12 13 15 21 27 30 32 34 34 36 36 37 LCS_GDT P 6 P 6 4 8 22 3 3 4 7 8 9 10 11 13 15 18 26 28 30 32 34 34 36 36 37 LCS_GDT W 7 W 7 4 8 22 3 4 4 7 8 9 10 11 12 15 17 17 18 19 26 31 31 35 36 37 LCS_GDT V 8 V 8 4 11 22 3 4 5 8 8 9 15 18 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT G 9 G 9 10 11 22 8 8 11 13 14 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT S 10 S 10 10 11 22 8 8 9 10 12 13 15 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT S 11 S 11 10 11 22 8 8 9 10 12 12 13 13 17 21 24 26 28 30 32 34 34 36 36 37 LCS_GDT Y 12 Y 12 10 11 22 8 8 9 10 12 12 13 13 17 21 24 26 28 30 32 34 34 36 36 37 LCS_GDT V 13 V 13 10 11 22 8 8 9 10 12 12 13 13 17 21 24 26 28 30 32 34 34 36 36 37 LCS_GDT A 14 A 14 10 11 22 8 8 9 10 12 12 13 13 14 15 20 24 27 29 32 34 34 36 36 37 LCS_GDT E 15 E 15 10 11 22 8 8 9 10 12 12 13 13 13 15 18 20 20 22 28 31 33 36 36 37 LCS_GDT T 16 T 16 10 11 22 8 8 9 10 12 12 13 13 13 15 18 20 20 24 29 34 34 36 36 37 LCS_GDT G 17 G 17 10 11 24 3 4 7 10 12 12 13 13 13 15 18 20 27 29 32 34 34 36 36 37 LCS_GDT Q 18 Q 18 10 11 25 3 4 9 10 12 12 13 13 17 21 24 26 28 30 32 34 34 36 36 37 LCS_GDT N 19 N 19 3 6 25 3 3 5 6 7 10 15 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT W 20 W 20 9 15 25 4 6 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT A 21 A 21 9 15 25 4 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT S 22 S 22 9 15 25 6 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT L 23 L 23 9 15 25 6 7 10 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT A 24 A 24 9 15 25 6 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT A 25 A 25 9 15 25 6 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT N 26 N 26 9 15 25 6 7 10 12 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT E 27 E 27 9 15 25 6 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT L 28 L 28 9 15 25 4 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT R 29 R 29 6 15 25 4 6 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT V 30 V 30 6 15 25 4 7 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT T 31 T 31 6 15 25 4 6 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT E 32 E 32 6 15 25 4 6 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT R 33 R 33 6 15 25 3 5 6 12 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT P 34 P 34 6 15 25 3 5 6 8 13 17 18 18 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT F 35 F 35 6 14 25 3 5 6 8 12 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT W 36 W 36 6 14 25 4 5 6 9 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT I 37 I 37 5 7 25 4 4 5 6 6 9 12 16 18 20 24 26 28 30 32 34 34 36 36 37 LCS_GDT S 38 S 38 5 7 25 4 4 5 6 6 7 7 11 17 20 21 24 27 30 32 34 34 36 36 37 LCS_GDT S 39 S 39 5 7 25 4 4 5 8 13 16 18 18 19 22 24 26 28 30 32 34 34 36 36 37 LCS_GDT F 40 F 40 5 7 25 4 4 5 6 6 7 7 9 13 16 21 22 23 24 27 31 34 35 36 37 LCS_GDT I 41 I 41 5 7 25 4 4 4 6 6 7 9 10 13 17 21 22 23 24 26 28 31 34 36 37 LCS_GDT G 42 G 42 4 7 25 3 4 4 5 5 7 9 10 14 17 21 22 23 24 26 28 31 34 35 36 LCS_GDT R 43 R 43 4 6 25 3 4 4 5 5 7 8 10 12 13 15 22 23 24 25 27 29 31 32 34 LCS_GDT S 44 S 44 4 6 23 3 4 4 5 5 5 6 7 7 9 10 13 15 15 17 17 18 25 26 30 LCS_GDT K 45 K 45 4 6 15 3 4 4 5 5 5 6 7 7 9 9 11 13 13 13 15 18 18 21 21 LCS_AVERAGE LCS_A: 31.27 ( 15.55 25.21 53.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 8 11 13 15 17 18 19 21 22 24 26 28 30 32 34 34 36 36 37 GDT PERCENT_AT 18.18 18.18 25.00 29.55 34.09 38.64 40.91 43.18 47.73 50.00 54.55 59.09 63.64 68.18 72.73 77.27 77.27 81.82 81.82 84.09 GDT RMS_LOCAL 0.32 0.32 1.12 1.30 1.96 2.15 2.27 2.91 3.07 3.22 3.79 4.13 4.35 4.69 5.13 5.51 5.51 5.85 5.85 5.99 GDT RMS_ALL_AT 16.12 16.12 9.41 9.42 10.38 10.84 10.39 9.50 9.66 9.60 9.43 9.17 9.19 8.99 8.94 8.83 8.83 8.83 8.83 8.68 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.175 0 0.115 0.160 21.724 0.000 0.000 - LGA V 3 V 3 13.122 0 0.018 1.119 15.488 0.000 0.000 9.335 LGA Q 4 Q 4 11.880 0 0.686 0.987 19.847 0.000 0.000 18.258 LGA G 5 G 5 8.479 0 0.145 0.145 10.053 0.000 0.000 - LGA P 6 P 6 6.608 0 0.027 0.074 9.955 0.000 0.000 9.756 LGA W 7 W 7 8.342 0 0.453 1.245 17.410 0.000 0.000 16.547 LGA V 8 V 8 4.660 0 0.615 0.621 7.783 16.818 9.610 5.625 LGA G 9 G 9 0.706 0 0.480 0.480 3.218 44.091 44.091 - LGA S 10 S 10 5.113 0 0.025 0.125 8.421 6.818 5.455 4.480 LGA S 11 S 11 8.521 0 0.098 0.593 10.505 0.000 0.000 9.180 LGA Y 12 Y 12 7.659 0 0.073 1.292 9.537 0.000 1.818 7.747 LGA V 13 V 13 9.014 0 0.026 0.077 12.959 0.000 0.000 11.079 LGA A 14 A 14 13.966 0 0.015 0.017 17.018 0.000 0.000 - LGA E 15 E 15 15.679 0 0.083 0.138 20.595 0.000 0.000 20.595 LGA T 16 T 16 14.082 0 0.065 0.091 14.235 0.000 0.000 9.699 LGA G 17 G 17 13.210 0 0.585 0.585 13.210 0.000 0.000 - LGA Q 18 Q 18 9.171 0 0.682 1.116 13.811 0.000 0.000 12.327 LGA N 19 N 19 5.146 0 0.093 0.979 9.142 8.182 4.091 8.660 LGA W 20 W 20 2.318 0 0.633 0.608 9.569 49.091 14.156 9.569 LGA A 21 A 21 1.566 0 0.006 0.023 1.832 50.909 50.909 - LGA S 22 S 22 2.580 0 0.141 0.212 3.527 30.000 24.848 3.527 LGA L 23 L 23 3.249 0 0.034 0.099 6.573 30.455 15.909 6.573 LGA A 24 A 24 1.928 0 0.029 0.027 2.458 54.545 51.273 - LGA A 25 A 25 1.749 0 0.077 0.078 2.435 55.455 52.000 - LGA N 26 N 26 2.186 0 0.019 0.074 5.018 51.364 29.318 4.478 LGA E 27 E 27 1.571 0 0.033 0.783 6.187 51.364 29.293 6.187 LGA L 28 L 28 2.104 0 0.639 0.555 3.641 38.182 35.682 2.235 LGA R 29 R 29 2.602 0 0.178 1.579 8.496 30.000 13.554 6.133 LGA V 30 V 30 2.525 0 0.063 0.071 3.701 32.727 25.455 3.701 LGA T 31 T 31 2.410 0 0.108 0.104 3.063 38.182 32.208 2.955 LGA E 32 E 32 2.353 0 0.034 1.171 8.791 51.818 25.253 8.447 LGA R 33 R 33 2.921 0 0.068 0.723 4.740 20.455 16.033 3.686 LGA P 34 P 34 4.385 0 0.043 0.365 6.319 10.000 5.714 6.319 LGA F 35 F 35 3.831 0 0.590 1.347 9.524 5.909 3.140 9.524 LGA W 36 W 36 4.056 0 0.624 1.288 9.078 5.909 3.377 7.377 LGA I 37 I 37 7.222 0 0.032 1.390 11.409 0.000 0.000 11.409 LGA S 38 S 38 9.018 0 0.090 0.102 9.792 0.000 0.000 8.501 LGA S 39 S 39 5.289 0 0.108 0.127 7.365 0.000 1.212 4.626 LGA F 40 F 40 9.756 0 0.116 1.681 15.951 0.000 0.000 15.951 LGA I 41 I 41 13.140 0 0.597 0.569 15.718 0.000 0.000 13.817 LGA G 42 G 42 14.302 0 0.041 0.041 15.673 0.000 0.000 - LGA R 43 R 43 16.413 0 0.047 1.115 17.838 0.000 0.000 17.242 LGA S 44 S 44 18.866 0 0.048 0.681 21.075 0.000 0.000 21.075 LGA K 45 K 45 22.305 0 0.008 1.034 29.656 0.000 0.000 29.656 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.234 8.211 9.467 15.506 11.236 3.169 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.91 42.045 38.409 0.631 LGA_LOCAL RMSD: 2.909 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.504 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.234 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.826017 * X + 0.562391 * Y + 0.037585 * Z + -18.567072 Y_new = -0.523936 * X + -0.741528 * Y + -0.419078 * Z + 51.309299 Z_new = -0.207815 * X + -0.365857 * Y + 0.907172 * Z + -14.343718 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.576339 0.209341 -0.383343 [DEG: -147.6133 11.9944 -21.9639 ] ZXZ: 0.089446 0.434283 -2.625017 [DEG: 5.1249 24.8826 -150.4024 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS071_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS071_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.91 38.409 8.23 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS071_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 1e0c_A ATOM 20 N ALA 2 -6.654 36.387 2.143 1.00 27.25 N ATOM 21 CA ALA 2 -6.006 37.667 1.948 1.00 25.58 C ATOM 22 C ALA 2 -5.275 38.010 3.229 1.00 25.45 C ATOM 23 O ALA 2 -5.880 38.022 4.299 1.00 25.10 O ATOM 24 CB ALA 2 -7.016 38.748 1.590 1.00 27.51 C ATOM 30 N VAL 3 -3.978 38.273 3.137 1.00 28.21 N ATOM 31 CA VAL 3 -3.213 38.602 4.329 1.00 29.40 C ATOM 32 C VAL 3 -2.046 39.520 3.995 1.00 34.62 C ATOM 33 O VAL 3 -1.348 39.320 3.001 1.00 40.00 O ATOM 34 CB VAL 3 -2.728 37.306 5.021 1.00 28.44 C ATOM 35 CG1 VAL 3 -1.830 36.513 4.089 1.00 29.58 C ATOM 36 CG2 VAL 3 -1.996 37.646 6.307 1.00 29.32 C ATOM 46 N GLN 4 -1.849 40.534 4.833 1.00 34.45 N ATOM 47 CA GLN 4 -0.792 41.518 4.626 1.00 39.85 C ATOM 48 C GLN 4 0.473 41.235 5.435 1.00 40.24 C ATOM 49 O GLN 4 1.557 41.695 5.075 1.00 47.25 O ATOM 50 CB GLN 4 -1.306 42.916 4.981 1.00 35.80 C ATOM 51 CG GLN 4 -2.471 43.401 4.137 1.00 35.54 C ATOM 52 CD GLN 4 -2.107 43.531 2.668 1.00 43.09 C ATOM 53 OE1 GLN 4 -1.151 44.229 2.321 1.00 48.62 O ATOM 54 NE2 GLN 4 -2.858 42.863 1.799 1.00 43.37 N ATOM 63 N GLY 5 0.338 40.492 6.530 1.00 34.56 N ATOM 64 CA GLY 5 1.481 40.215 7.387 1.00 34.74 C ATOM 65 C GLY 5 2.332 39.053 6.872 1.00 36.85 C ATOM 66 O GLY 5 1.796 38.007 6.501 1.00 36.58 O ATOM 70 N PRO 6 3.669 39.201 6.932 1.00 39.69 N ATOM 71 CA PRO 6 4.722 38.291 6.477 1.00 43.47 C ATOM 72 C PRO 6 4.805 37.032 7.329 1.00 42.01 C ATOM 73 O PRO 6 5.426 36.047 6.926 1.00 47.81 O ATOM 74 CB PRO 6 6.000 39.123 6.622 1.00 47.93 C ATOM 75 CG PRO 6 5.697 40.095 7.708 1.00 48.86 C ATOM 76 CD PRO 6 4.241 40.419 7.538 1.00 43.85 C ATOM 84 N TRP 7 4.168 37.062 8.500 1.00 40.98 N ATOM 85 CA TRP 7 4.107 35.914 9.386 1.00 41.41 C ATOM 86 C TRP 7 3.443 34.750 8.658 1.00 37.40 C ATOM 87 O TRP 7 3.820 33.592 8.843 1.00 42.37 O ATOM 88 CB TRP 7 3.291 36.206 10.648 1.00 39.38 C ATOM 89 CG TRP 7 3.438 35.136 11.698 1.00 39.69 C ATOM 90 CD1 TRP 7 4.228 35.206 12.809 1.00 46.38 C ATOM 91 CD2 TRP 7 2.850 33.811 11.716 1.00 35.92 C ATOM 92 NE1 TRP 7 4.146 34.038 13.525 1.00 44.23 N ATOM 93 CE2 TRP 7 3.314 33.173 12.869 1.00 38.99 C ATOM 94 CE3 TRP 7 1.986 33.122 10.861 1.00 32.87 C ATOM 95 CZ2 TRP 7 2.942 31.879 13.191 1.00 40.16 C ATOM 96 CZ3 TRP 7 1.612 31.826 11.181 1.00 33.41 C ATOM 97 CH2 TRP 7 2.083 31.220 12.316 1.00 38.69 C ATOM 108 N VAL 8 2.407 35.064 7.869 1.00 33.14 N ATOM 109 CA VAL 8 1.659 34.038 7.173 1.00 31.93 C ATOM 110 C VAL 8 2.211 33.816 5.772 1.00 36.51 C ATOM 111 O VAL 8 2.095 34.687 4.903 1.00 39.38 O ATOM 112 CB VAL 8 0.173 34.426 7.074 1.00 28.32 C ATOM 113 CG1 VAL 8 -0.590 33.339 6.342 1.00 26.11 C ATOM 114 CG2 VAL 8 -0.405 34.661 8.457 1.00 26.74 C ATOM 124 N GLY 9 2.809 32.647 5.563 1.00 40.49 N ATOM 125 CA GLY 9 3.382 32.287 4.277 1.00 46.81 C ATOM 126 C GLY 9 2.400 31.517 3.402 1.00 40.08 C ATOM 127 O GLY 9 1.281 31.208 3.822 1.00 33.47 O ATOM 131 N SER 10 2.862 31.181 2.195 1.00 42.82 N ATOM 132 CA SER 10 2.072 30.489 1.181 1.00 35.92 C ATOM 133 C SER 10 1.655 29.088 1.580 1.00 33.19 C ATOM 134 O SER 10 0.623 28.594 1.126 1.00 28.32 O ATOM 135 CB SER 10 2.874 30.430 -0.109 1.00 38.25 C ATOM 136 OG SER 10 4.032 29.656 0.058 1.00 43.47 O ATOM 142 N SER 11 2.427 28.457 2.458 1.00 38.32 N ATOM 143 CA SER 11 2.087 27.127 2.925 1.00 37.89 C ATOM 144 C SER 11 0.896 27.148 3.876 1.00 35.48 C ATOM 145 O SER 11 0.187 26.151 4.006 1.00 37.68 O ATOM 146 CB SER 11 3.278 26.496 3.618 1.00 46.38 C ATOM 147 OG SER 11 3.578 27.164 4.814 1.00 48.74 O ATOM 153 N TYR 12 0.655 28.286 4.524 1.00 32.08 N ATOM 154 CA TYR 12 -0.445 28.379 5.465 1.00 29.62 C ATOM 155 C TYR 12 -1.714 28.736 4.730 1.00 25.45 C ATOM 156 O TYR 12 -2.772 28.145 4.969 1.00 25.61 O ATOM 157 CB TYR 12 -0.148 29.434 6.528 1.00 28.44 C ATOM 158 CG TYR 12 0.982 29.070 7.459 1.00 32.98 C ATOM 159 CD1 TYR 12 1.162 27.759 7.875 1.00 38.92 C ATOM 160 CD2 TYR 12 1.837 30.056 7.905 1.00 35.54 C ATOM 161 CE1 TYR 12 2.195 27.443 8.733 1.00 45.13 C ATOM 162 CE2 TYR 12 2.874 29.745 8.760 1.00 41.24 C ATOM 163 CZ TYR 12 3.054 28.443 9.175 1.00 44.43 C ATOM 164 OH TYR 12 4.088 28.130 10.029 1.00 49.71 O ATOM 174 N VAL 13 -1.575 29.674 3.797 1.00 23.77 N ATOM 175 CA VAL 13 -2.684 30.132 2.984 1.00 22.61 C ATOM 176 C VAL 13 -3.218 29.032 2.092 1.00 23.16 C ATOM 177 O VAL 13 -4.433 28.851 1.981 1.00 26.42 O ATOM 178 CB VAL 13 -2.256 31.340 2.136 1.00 22.67 C ATOM 179 CG1 VAL 13 -3.333 31.695 1.121 1.00 22.90 C ATOM 180 CG2 VAL 13 -2.001 32.507 3.072 1.00 23.19 C ATOM 190 N ALA 14 -2.314 28.302 1.455 1.00 23.06 N ATOM 191 CA ALA 14 -2.714 27.213 0.594 1.00 23.82 C ATOM 192 C ALA 14 -3.306 26.043 1.383 1.00 26.08 C ATOM 193 O ALA 14 -4.321 25.483 0.972 1.00 28.24 O ATOM 194 CB ALA 14 -1.529 26.750 -0.218 1.00 26.01 C ATOM 200 N GLU 15 -2.689 25.681 2.518 1.00 28.49 N ATOM 201 CA GLU 15 -3.155 24.533 3.298 1.00 31.68 C ATOM 202 C GLU 15 -4.516 24.735 3.966 1.00 35.48 C ATOM 203 O GLU 15 -5.422 23.921 3.771 1.00 42.55 O ATOM 204 CB GLU 15 -2.122 24.172 4.365 1.00 36.12 C ATOM 205 CG GLU 15 -2.448 22.928 5.185 1.00 40.98 C ATOM 206 CD GLU 15 -2.355 21.647 4.410 1.00 43.56 C ATOM 207 OE1 GLU 15 -1.615 21.602 3.458 1.00 46.59 O ATOM 208 OE2 GLU 15 -3.022 20.708 4.771 1.00 49.46 O ATOM 215 N THR 16 -4.665 25.792 4.770 1.00 33.53 N ATOM 216 CA THR 16 -5.940 26.017 5.457 1.00 39.07 C ATOM 217 C THR 16 -6.458 27.438 5.332 1.00 37.61 C ATOM 218 O THR 16 -7.561 27.740 5.798 1.00 43.56 O ATOM 219 CB THR 16 -5.850 25.761 6.954 1.00 41.32 C ATOM 220 OG1 THR 16 -4.935 26.707 7.510 1.00 34.51 O ATOM 221 CG2 THR 16 -5.394 24.358 7.292 1.00 47.36 C ATOM 229 N GLY 17 -5.666 28.327 4.755 1.00 32.65 N ATOM 230 CA GLY 17 -6.109 29.696 4.628 1.00 34.27 C ATOM 231 C GLY 17 -6.103 30.387 5.978 1.00 32.44 C ATOM 232 O GLY 17 -5.057 30.523 6.618 1.00 28.01 O ATOM 236 N GLN 18 -7.290 30.815 6.399 1.00 37.12 N ATOM 237 CA GLN 18 -7.469 31.562 7.634 1.00 35.36 C ATOM 238 C GLN 18 -7.200 30.772 8.911 1.00 36.18 C ATOM 239 O GLN 18 -6.962 31.376 9.957 1.00 39.61 O ATOM 240 CB GLN 18 -8.896 32.112 7.696 1.00 40.16 C ATOM 241 CG GLN 18 -9.952 31.039 7.880 1.00 42.46 C ATOM 242 CD GLN 18 -11.369 31.583 7.850 1.00 45.13 C ATOM 243 OE1 GLN 18 -11.619 32.752 7.539 1.00 47.70 O ATOM 244 NE2 GLN 18 -12.318 30.717 8.184 1.00 50.08 N ATOM 253 N ASN 19 -7.227 29.439 8.851 1.00 35.36 N ATOM 254 CA ASN 19 -7.010 28.687 10.083 1.00 40.82 C ATOM 255 C ASN 19 -5.547 28.727 10.501 1.00 38.99 C ATOM 256 O ASN 19 -5.239 29.034 11.654 1.00 42.64 O ATOM 257 CB ASN 19 -7.509 27.274 9.951 1.00 45.23 C ATOM 258 CG ASN 19 -9.011 27.211 9.929 1.00 45.54 C ATOM 259 OD1 ASN 19 -9.688 28.148 10.370 1.00 48.04 O ATOM 260 ND2 ASN 19 -9.548 26.128 9.427 1.00 50.97 N ATOM 267 N TRP 20 -4.631 28.487 9.570 1.00 33.08 N ATOM 268 CA TRP 20 -3.227 28.622 9.931 1.00 30.57 C ATOM 269 C TRP 20 -2.842 30.088 10.017 1.00 27.70 C ATOM 270 O TRP 20 -1.962 30.448 10.794 1.00 28.01 O ATOM 271 CB TRP 20 -2.289 27.913 8.965 1.00 30.47 C ATOM 272 CG TRP 20 -2.287 26.421 9.086 1.00 35.29 C ATOM 273 CD1 TRP 20 -1.926 25.525 8.126 1.00 38.18 C ATOM 274 CD2 TRP 20 -2.703 25.636 10.230 1.00 38.18 C ATOM 275 NE1 TRP 20 -2.063 24.244 8.599 1.00 42.73 N ATOM 276 CE2 TRP 20 -2.541 24.292 9.882 1.00 41.58 C ATOM 277 CE3 TRP 20 -3.193 25.959 11.503 1.00 41.49 C ATOM 278 CZ2 TRP 20 -2.848 23.267 10.761 1.00 46.59 C ATOM 279 CZ3 TRP 20 -3.500 24.931 12.382 1.00 48.16 C ATOM 280 CH2 TRP 20 -3.331 23.619 12.021 1.00 49.34 C ATOM 291 N ALA 21 -3.520 30.954 9.262 1.00 27.29 N ATOM 292 CA ALA 21 -3.240 32.380 9.356 1.00 27.59 C ATOM 293 C ALA 21 -3.554 32.905 10.760 1.00 30.57 C ATOM 294 O ALA 21 -2.874 33.808 11.243 1.00 29.93 O ATOM 295 CB ALA 21 -4.026 33.154 8.326 1.00 28.40 C ATOM 301 N SER 22 -4.553 32.308 11.437 1.00 33.75 N ATOM 302 CA SER 22 -4.920 32.718 12.795 1.00 37.61 C ATOM 303 C SER 22 -3.817 32.414 13.821 1.00 35.80 C ATOM 304 O SER 22 -3.856 32.928 14.939 1.00 39.07 O ATOM 305 CB SER 22 -6.206 32.046 13.249 1.00 46.27 C ATOM 306 OG SER 22 -6.024 30.680 13.499 1.00 48.27 O ATOM 312 N LEU 23 -2.825 31.600 13.443 1.00 31.88 N ATOM 313 CA LEU 23 -1.705 31.318 14.321 1.00 33.69 C ATOM 314 C LEU 23 -0.895 32.602 14.516 1.00 31.23 C ATOM 315 O LEU 23 -0.269 32.792 15.560 1.00 34.10 O ATOM 316 CB LEU 23 -0.820 30.227 13.721 1.00 37.47 C ATOM 317 CG LEU 23 -1.421 28.821 13.607 1.00 40.49 C ATOM 318 CD1 LEU 23 -0.444 27.932 12.843 1.00 46.38 C ATOM 319 CD2 LEU 23 -1.693 28.270 14.996 1.00 49.10 C ATOM 331 N ALA 24 -0.928 33.489 13.510 1.00 28.36 N ATOM 332 CA ALA 24 -0.271 34.779 13.609 1.00 27.59 C ATOM 333 C ALA 24 -0.932 35.580 14.708 1.00 28.57 C ATOM 334 O ALA 24 -0.254 36.232 15.491 1.00 28.89 O ATOM 335 CB ALA 24 -0.348 35.541 12.295 1.00 27.93 C ATOM 341 N ALA 25 -2.263 35.507 14.775 1.00 32.65 N ATOM 342 CA ALA 25 -3.034 36.196 15.801 1.00 36.51 C ATOM 343 C ALA 25 -2.749 35.613 17.178 1.00 38.69 C ATOM 344 O ALA 25 -2.795 36.324 18.178 1.00 43.37 O ATOM 345 CB ALA 25 -4.519 36.128 15.487 1.00 44.14 C ATOM 351 N ASN 26 -2.446 34.320 17.237 1.00 37.05 N ATOM 352 CA ASN 26 -2.091 33.713 18.508 1.00 41.66 C ATOM 353 C ASN 26 -0.749 34.242 19.032 1.00 42.19 C ATOM 354 O ASN 26 -0.580 34.412 20.241 1.00 49.34 O ATOM 355 CB ASN 26 -2.059 32.204 18.386 1.00 45.43 C ATOM 356 CG ASN 26 -3.432 31.609 18.273 1.00 44.83 C ATOM 357 OD1 ASN 26 -4.430 32.241 18.640 1.00 48.74 O ATOM 358 ND2 ASN 26 -3.504 30.401 17.780 1.00 48.86 N ATOM 365 N GLU 27 0.196 34.514 18.127 1.00 38.03 N ATOM 366 CA GLU 27 1.510 35.025 18.533 1.00 42.01 C ATOM 367 C GLU 27 1.622 36.558 18.583 1.00 42.28 C ATOM 368 O GLU 27 2.393 37.098 19.381 1.00 50.20 O ATOM 369 CB GLU 27 2.597 34.498 17.590 1.00 42.10 C ATOM 370 CG GLU 27 2.821 32.994 17.649 1.00 45.95 C ATOM 371 CD GLU 27 3.963 32.538 16.779 1.00 45.74 C ATOM 372 OE1 GLU 27 4.588 33.370 16.162 1.00 47.36 O ATOM 373 OE2 GLU 27 4.214 31.357 16.732 1.00 49.96 O ATOM 380 N LEU 28 0.881 37.248 17.724 1.00 36.45 N ATOM 381 CA LEU 28 0.961 38.703 17.601 1.00 37.54 C ATOM 382 C LEU 28 -0.159 39.419 18.345 1.00 38.62 C ATOM 383 O LEU 28 -1.231 38.859 18.565 1.00 41.41 O ATOM 384 CB LEU 28 0.913 39.073 16.113 1.00 34.86 C ATOM 385 CG LEU 28 2.021 38.446 15.257 1.00 38.77 C ATOM 386 CD1 LEU 28 1.782 38.765 13.790 1.00 40.24 C ATOM 387 CD2 LEU 28 3.364 38.985 15.716 1.00 48.51 C ATOM 399 N ARG 29 0.081 40.673 18.721 1.00 40.16 N ATOM 400 CA ARG 29 -0.905 41.487 19.446 1.00 43.19 C ATOM 401 C ARG 29 -2.031 42.000 18.543 1.00 40.16 C ATOM 402 O ARG 29 -2.152 43.205 18.316 1.00 43.00 O ATOM 403 CB ARG 29 -0.227 42.669 20.116 1.00 44.73 C ATOM 404 CG ARG 29 0.747 42.301 21.223 1.00 48.04 C ATOM 405 CD ARG 29 1.369 43.502 21.834 1.00 46.59 C ATOM 406 NE ARG 29 2.299 43.148 22.894 1.00 47.81 N ATOM 407 CZ ARG 29 2.980 44.034 23.648 1.00 47.48 C ATOM 408 NH1 ARG 29 2.826 45.325 23.451 1.00 51.62 N ATOM 409 NH2 ARG 29 3.802 43.604 24.589 1.00 50.97 N ATOM 423 N VAL 30 -2.835 41.081 18.020 1.00 39.45 N ATOM 424 CA VAL 30 -3.905 41.421 17.098 1.00 36.12 C ATOM 425 C VAL 30 -5.195 41.788 17.804 1.00 39.92 C ATOM 426 O VAL 30 -5.807 40.953 18.474 1.00 47.36 O ATOM 427 CB VAL 30 -4.190 40.240 16.155 1.00 37.75 C ATOM 428 CG1 VAL 30 -5.333 40.591 15.211 1.00 38.25 C ATOM 429 CG2 VAL 30 -2.935 39.897 15.393 1.00 33.58 C ATOM 439 N THR 31 -5.626 43.032 17.623 1.00 37.12 N ATOM 440 CA THR 31 -6.891 43.483 18.183 1.00 40.82 C ATOM 441 C THR 31 -7.887 43.716 17.052 1.00 39.53 C ATOM 442 O THR 31 -9.091 43.525 17.223 1.00 45.43 O ATOM 443 CB THR 31 -6.713 44.778 18.996 1.00 44.43 C ATOM 444 OG1 THR 31 -6.226 45.819 18.139 1.00 45.03 O ATOM 445 CG2 THR 31 -5.719 44.556 20.127 1.00 49.59 C ATOM 453 N GLU 32 -7.360 44.097 15.888 1.00 34.51 N ATOM 454 CA GLU 32 -8.147 44.296 14.673 1.00 33.08 C ATOM 455 C GLU 32 -7.323 43.732 13.506 1.00 29.58 C ATOM 456 O GLU 32 -6.097 43.857 13.508 1.00 27.97 O ATOM 457 CB GLU 32 -8.428 45.797 14.432 1.00 32.87 C ATOM 458 CG GLU 32 -9.132 46.559 15.565 1.00 40.41 C ATOM 459 CD GLU 32 -10.592 46.247 15.757 1.00 43.28 C ATOM 460 OE1 GLU 32 -11.251 45.907 14.808 1.00 44.23 O ATOM 461 OE2 GLU 32 -11.052 46.358 16.869 1.00 50.58 O ATOM 468 N ARG 33 -7.973 43.140 12.508 1.00 29.32 N ATOM 469 CA ARG 33 -7.235 42.611 11.360 1.00 27.25 C ATOM 470 C ARG 33 -7.189 43.598 10.195 1.00 24.52 C ATOM 471 O ARG 33 -8.152 44.330 9.962 1.00 25.23 O ATOM 472 CB ARG 33 -7.880 41.335 10.864 1.00 28.89 C ATOM 473 CG ARG 33 -7.890 40.188 11.849 1.00 32.81 C ATOM 474 CD ARG 33 -8.728 39.075 11.346 1.00 35.67 C ATOM 475 NE ARG 33 -8.731 37.944 12.252 1.00 39.77 N ATOM 476 CZ ARG 33 -9.523 37.849 13.340 1.00 43.94 C ATOM 477 NH1 ARG 33 -10.341 38.831 13.660 1.00 46.92 N ATOM 478 NH2 ARG 33 -9.475 36.763 14.093 1.00 49.10 N ATOM 492 N PRO 34 -6.081 43.614 9.452 1.00 22.98 N ATOM 493 CA PRO 34 -4.819 42.894 9.616 1.00 23.14 C ATOM 494 C PRO 34 -3.879 43.563 10.618 1.00 24.08 C ATOM 495 O PRO 34 -3.962 44.768 10.862 1.00 24.17 O ATOM 496 CB PRO 34 -4.235 42.883 8.201 1.00 24.92 C ATOM 497 CG PRO 34 -4.784 44.100 7.562 1.00 26.46 C ATOM 498 CD PRO 34 -6.183 44.209 8.110 1.00 24.88 C ATOM 506 N PHE 35 -2.981 42.770 11.185 1.00 25.75 N ATOM 507 CA PHE 35 -1.965 43.228 12.132 1.00 27.97 C ATOM 508 C PHE 35 -0.964 44.177 11.488 1.00 28.77 C ATOM 509 O PHE 35 -0.635 45.236 12.039 1.00 30.61 O ATOM 510 CB PHE 35 -1.196 42.036 12.696 1.00 30.66 C ATOM 511 CG PHE 35 -0.151 42.394 13.721 1.00 33.53 C ATOM 512 CD1 PHE 35 -0.500 42.662 15.038 1.00 34.80 C ATOM 513 CD2 PHE 35 1.187 42.460 13.368 1.00 39.30 C ATOM 514 CE1 PHE 35 0.464 42.986 15.974 1.00 41.41 C ATOM 515 CE2 PHE 35 2.153 42.780 14.302 1.00 45.43 C ATOM 516 CZ PHE 35 1.790 43.042 15.608 1.00 47.59 C ATOM 526 N TRP 36 -0.472 43.755 10.325 1.00 29.62 N ATOM 527 CA TRP 36 0.584 44.419 9.582 1.00 31.73 C ATOM 528 C TRP 36 0.351 45.893 9.355 1.00 29.58 C ATOM 529 O TRP 36 1.286 46.679 9.504 1.00 33.36 O ATOM 530 CB TRP 36 0.760 43.730 8.236 1.00 31.88 C ATOM 531 CG TRP 36 1.859 44.294 7.382 1.00 35.29 C ATOM 532 CD1 TRP 36 3.183 43.991 7.471 1.00 41.92 C ATOM 533 CD2 TRP 36 1.739 45.234 6.287 1.00 36.25 C ATOM 534 NE1 TRP 36 3.893 44.676 6.515 1.00 46.92 N ATOM 535 CE2 TRP 36 3.024 45.438 5.779 1.00 42.73 C ATOM 536 CE3 TRP 36 0.663 45.900 5.701 1.00 35.99 C ATOM 537 CZ2 TRP 36 3.264 46.284 4.708 1.00 47.59 C ATOM 538 CZ3 TRP 36 0.898 46.747 4.628 1.00 42.55 C ATOM 539 CH2 TRP 36 2.166 46.933 4.142 1.00 46.27 C ATOM 550 N ILE 37 -0.874 46.284 9.010 1.00 26.78 N ATOM 551 CA ILE 37 -1.142 47.687 8.735 1.00 28.89 C ATOM 552 C ILE 37 -1.067 48.560 9.979 1.00 26.88 C ATOM 553 O ILE 37 -0.879 49.765 9.861 1.00 29.06 O ATOM 554 CB ILE 37 -2.523 47.886 8.085 1.00 32.98 C ATOM 555 CG1 ILE 37 -3.637 47.476 9.050 1.00 29.32 C ATOM 556 CG2 ILE 37 -2.605 47.097 6.800 1.00 36.25 C ATOM 557 CD1 ILE 37 -5.025 47.818 8.563 1.00 32.34 C ATOM 569 N SER 38 -1.178 47.983 11.175 1.00 28.13 N ATOM 570 CA SER 38 -1.090 48.826 12.352 1.00 33.36 C ATOM 571 C SER 38 0.362 49.152 12.630 1.00 37.61 C ATOM 572 O SER 38 0.686 50.260 13.060 1.00 40.90 O ATOM 573 CB SER 38 -1.699 48.141 13.559 1.00 38.62 C ATOM 574 OG SER 38 -0.937 47.030 13.950 1.00 41.92 O ATOM 580 N SER 39 1.250 48.207 12.316 1.00 37.61 N ATOM 581 CA SER 39 2.675 48.452 12.506 1.00 43.00 C ATOM 582 C SER 39 3.259 49.218 11.324 1.00 41.66 C ATOM 583 O SER 39 4.202 49.994 11.483 1.00 47.93 O ATOM 584 CB SER 39 3.420 47.142 12.676 1.00 46.92 C ATOM 585 OG SER 39 3.413 46.400 11.486 1.00 44.33 O ATOM 591 N PHE 40 2.673 49.010 10.148 1.00 38.55 N ATOM 592 CA PHE 40 3.072 49.694 8.928 1.00 41.49 C ATOM 593 C PHE 40 2.709 51.168 8.969 1.00 40.24 C ATOM 594 O PHE 40 3.553 52.035 8.731 1.00 48.16 O ATOM 595 CB PHE 40 2.419 49.022 7.726 1.00 38.11 C ATOM 596 CG PHE 40 2.711 49.678 6.417 1.00 39.53 C ATOM 597 CD1 PHE 40 3.969 49.585 5.844 1.00 45.95 C ATOM 598 CD2 PHE 40 1.720 50.374 5.745 1.00 42.01 C ATOM 599 CE1 PHE 40 4.232 50.179 4.624 1.00 50.58 C ATOM 600 CE2 PHE 40 1.980 50.970 4.528 1.00 48.74 C ATOM 601 CZ PHE 40 3.239 50.870 3.966 1.00 50.58 C ATOM 611 N ILE 41 1.442 51.445 9.257 1.00 37.05 N ATOM 612 CA ILE 41 0.933 52.802 9.338 1.00 43.09 C ATOM 613 C ILE 41 1.466 53.527 10.564 1.00 41.41 C ATOM 614 O ILE 41 1.839 54.699 10.485 1.00 49.22 O ATOM 615 CB ILE 41 -0.608 52.804 9.369 1.00 41.66 C ATOM 616 CG1 ILE 41 -1.147 52.298 8.024 1.00 45.43 C ATOM 617 CG2 ILE 41 -1.131 54.199 9.674 1.00 47.59 C ATOM 618 CD1 ILE 41 -2.627 51.994 8.036 1.00 45.74 C ATOM 630 N GLY 42 1.475 52.840 11.706 1.00 38.11 N ATOM 631 CA GLY 42 1.890 53.445 12.961 1.00 44.83 C ATOM 632 C GLY 42 0.668 53.668 13.848 1.00 42.01 C ATOM 633 O GLY 42 0.793 54.063 15.009 1.00 46.17 O ATOM 637 N ARG 43 -0.512 53.408 13.285 1.00 37.05 N ATOM 638 CA ARG 43 -1.778 53.525 13.985 1.00 40.41 C ATOM 639 C ARG 43 -2.678 52.377 13.560 1.00 37.75 C ATOM 640 O ARG 43 -2.674 51.979 12.395 1.00 33.47 O ATOM 641 CB ARG 43 -2.470 54.849 13.676 1.00 44.93 C ATOM 642 CG ARG 43 -1.738 56.099 14.139 1.00 46.38 C ATOM 643 CD ARG 43 -1.741 56.216 15.620 1.00 47.14 C ATOM 644 NE ARG 43 -1.139 57.460 16.065 1.00 49.46 N ATOM 645 CZ ARG 43 0.181 57.644 16.269 1.00 45.54 C ATOM 646 NH1 ARG 43 1.032 56.661 16.063 1.00 47.36 N ATOM 647 NH2 ARG 43 0.623 58.822 16.678 1.00 50.46 N ATOM 661 N SER 44 -3.449 51.849 14.502 1.00 41.92 N ATOM 662 CA SER 44 -4.342 50.742 14.195 1.00 37.68 C ATOM 663 C SER 44 -5.591 51.217 13.477 1.00 38.40 C ATOM 664 O SER 44 -5.976 52.383 13.577 1.00 46.17 O ATOM 665 CB SER 44 -4.732 50.012 15.466 1.00 43.28 C ATOM 666 OG SER 44 -5.534 50.820 16.281 1.00 49.59 O ATOM 672 N LYS 45 -6.227 50.297 12.767 1.00 35.48 N ATOM 673 CA LYS 45 -7.455 50.583 12.045 1.00 38.99 C ATOM 674 C LYS 45 -8.545 49.617 12.469 1.00 39.77 C ATOM 675 O LYS 45 -8.256 48.488 12.863 1.00 36.12 O ATOM 676 CB LYS 45 -7.226 50.497 10.532 1.00 39.45 C ATOM 677 CG LYS 45 -6.189 51.475 9.987 1.00 40.41 C ATOM 678 CD LYS 45 -6.699 52.905 10.089 1.00 45.13 C ATOM 679 CE LYS 45 -5.728 53.902 9.475 1.00 46.17 C ATOM 680 NZ LYS 45 -6.229 55.303 9.591 1.00 52.71 N TER END