####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS089_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.47 4.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.94 5.55 LCS_AVERAGE: 36.83 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.59 5.78 LCS_AVERAGE: 16.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 8 8 12 18 24 28 33 37 40 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 25 28 35 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 12 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 8 16 23 28 32 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 3 4 6 9 16 26 32 34 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 3 5 8 19 24 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 16 21 27 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 14 16 21 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 12 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 4 9 16 23 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 5 17 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 7 12 14 15 19 24 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 7 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 16 44 3 3 3 5 8 17 21 30 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 16 44 3 3 3 13 16 22 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 16 44 3 3 3 4 8 13 16 23 26 30 34 39 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 16 44 3 3 14 15 20 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 7 14 20 24 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 17 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 10 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 3 5 7 11 11 22 28 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 3 5 12 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 6 10 44 3 5 6 11 11 11 13 28 31 35 40 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 6 10 44 3 5 7 11 11 11 13 17 21 29 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 6 10 44 3 5 6 11 11 11 13 15 17 21 28 30 34 39 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 3 6 11 11 11 12 14 15 18 19 21 24 25 32 35 38 41 41 43 LCS_AVERAGE LCS_A: 51.22 ( 16.84 36.83 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 14 18 22 25 29 33 36 38 40 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 20.45 27.27 31.82 40.91 50.00 56.82 65.91 75.00 81.82 86.36 90.91 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.38 0.59 0.83 1.48 1.70 1.89 2.25 2.52 2.80 3.00 3.27 3.27 3.42 3.64 3.64 3.95 3.95 3.95 3.95 3.95 GDT RMS_ALL_AT 5.54 5.78 5.85 4.79 4.92 5.02 5.13 5.11 4.94 4.85 4.67 4.67 4.67 4.58 4.58 4.51 4.51 4.51 4.51 4.51 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.412 0 0.353 0.425 8.036 0.000 0.000 - LGA V 3 V 3 5.762 0 0.238 0.314 6.140 0.000 0.000 6.140 LGA Q 4 Q 4 4.783 0 0.049 0.855 7.243 12.273 5.455 5.930 LGA G 5 G 5 2.764 0 0.301 0.301 6.045 11.818 11.818 - LGA P 6 P 6 5.625 0 0.071 0.094 7.039 0.000 0.000 7.039 LGA W 7 W 7 6.583 0 0.195 0.150 12.308 0.455 0.130 12.285 LGA V 8 V 8 3.884 0 0.405 1.319 5.946 25.455 16.883 3.998 LGA G 9 G 9 4.266 0 0.552 0.552 4.266 17.273 17.273 - LGA S 10 S 10 2.073 0 0.063 0.702 2.580 53.182 48.182 2.250 LGA S 11 S 11 1.536 0 0.079 0.670 3.615 55.455 43.333 3.615 LGA Y 12 Y 12 2.240 0 0.059 0.872 10.070 55.000 20.000 10.070 LGA V 13 V 13 2.148 0 0.048 1.191 6.167 44.545 35.325 6.167 LGA A 14 A 14 2.827 0 0.040 0.041 3.755 29.091 26.909 - LGA E 15 E 15 3.083 0 0.075 1.169 4.552 23.636 14.545 4.483 LGA T 16 T 16 1.273 0 0.140 1.038 2.421 61.818 57.922 2.421 LGA G 17 G 17 1.914 0 0.674 0.674 3.128 42.727 42.727 - LGA Q 18 Q 18 3.517 0 0.676 1.196 6.889 16.818 7.475 5.566 LGA N 19 N 19 2.770 0 0.521 1.325 9.091 35.000 17.727 6.740 LGA W 20 W 20 3.250 0 0.503 1.101 8.457 40.000 11.429 8.457 LGA A 21 A 21 1.156 0 0.049 0.066 1.784 65.909 72.727 - LGA S 22 S 22 1.311 0 0.029 0.657 1.726 65.455 60.606 1.614 LGA L 23 L 23 1.687 0 0.060 1.466 6.521 58.182 34.318 4.672 LGA A 24 A 24 1.621 0 0.030 0.031 1.942 58.182 56.727 - LGA A 25 A 25 0.600 0 0.027 0.036 1.065 77.727 82.182 - LGA N 26 N 26 0.522 0 0.021 0.292 1.072 82.273 84.545 0.767 LGA E 27 E 27 1.153 0 0.109 1.479 6.374 62.727 38.990 6.374 LGA L 28 L 28 1.480 0 0.151 1.452 5.166 58.182 36.364 5.166 LGA R 29 R 29 1.324 0 0.053 1.346 7.579 61.818 34.215 7.579 LGA V 30 V 30 1.042 0 0.281 1.178 2.507 73.636 60.779 2.507 LGA T 31 T 31 1.659 0 0.716 0.904 5.907 38.636 25.195 3.529 LGA E 32 E 32 5.460 0 0.564 1.581 12.338 5.455 2.424 12.338 LGA R 33 R 33 3.950 0 0.054 0.229 7.962 4.091 3.967 7.962 LGA P 34 P 34 6.848 0 0.658 0.603 8.181 0.000 0.000 8.181 LGA F 35 F 35 2.979 0 0.602 1.042 9.804 21.818 8.926 9.804 LGA W 36 W 36 3.654 0 0.596 0.521 11.769 26.364 7.532 11.769 LGA I 37 I 37 3.560 0 0.087 0.887 6.528 31.364 15.909 6.528 LGA S 38 S 38 2.715 0 0.062 0.143 4.496 27.727 20.303 4.255 LGA S 39 S 39 2.544 0 0.226 0.732 4.915 28.182 26.970 3.877 LGA F 40 F 40 3.510 0 0.163 0.947 9.174 20.455 7.934 9.174 LGA I 41 I 41 2.184 0 0.125 0.630 5.849 26.364 17.955 5.108 LGA G 42 G 42 8.428 0 0.135 0.135 11.539 0.000 0.000 - LGA R 43 R 43 10.472 0 0.207 1.410 15.013 0.000 0.000 15.013 LGA S 44 S 44 13.376 0 0.337 0.848 16.559 0.000 0.000 14.490 LGA K 45 K 45 17.805 0 0.577 0.750 22.191 0.000 0.000 22.191 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.474 4.518 6.050 32.252 24.448 8.364 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.52 60.227 57.353 1.257 LGA_LOCAL RMSD: 2.525 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.112 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.474 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.864657 * X + -0.394446 * Y + -0.311096 * Z + 7.693595 Y_new = 0.217296 * X + -0.264674 * Y + 0.939537 * Z + -24.087126 Z_new = -0.452935 * X + -0.879977 * Y + -0.143141 * Z + 98.994133 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.246210 0.470055 -1.732048 [DEG: 14.1068 26.9322 -99.2391 ] ZXZ: -2.821839 1.714431 -2.666245 [DEG: -161.6795 98.2296 -152.7646 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS089_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.52 57.353 4.47 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS089_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 9.080 42.127 11.730 1.00 9.43 ATOM 10 CA ALA 2 9.022 42.915 10.522 1.00 9.43 ATOM 11 CB ALA 2 9.278 44.409 10.794 1.00 9.43 ATOM 12 C ALA 2 9.983 42.478 9.445 1.00 9.43 ATOM 13 O ALA 2 11.028 43.089 9.247 1.00 9.43 ATOM 14 N VAL 3 9.556 41.529 8.583 1.00 9.99 ATOM 15 CA VAL 3 10.430 40.919 7.610 1.00 9.99 ATOM 16 CB VAL 3 10.401 39.420 7.758 1.00 9.99 ATOM 17 CG1 VAL 3 11.542 38.751 6.976 1.00 9.99 ATOM 18 CG2 VAL 3 10.383 39.109 9.255 1.00 9.99 ATOM 19 C VAL 3 9.900 41.258 6.234 1.00 9.99 ATOM 20 O VAL 3 9.103 42.184 6.089 1.00 9.99 ATOM 21 N GLN 4 10.373 40.556 5.172 1.00 8.42 ATOM 22 CA GLN 4 9.916 40.808 3.825 1.00 8.42 ATOM 23 CB GLN 4 11.022 40.746 2.756 1.00 8.42 ATOM 24 CG GLN 4 12.187 41.703 3.003 1.00 8.42 ATOM 25 CD GLN 4 13.233 40.941 3.802 1.00 8.42 ATOM 26 OE1 GLN 4 13.499 39.771 3.531 1.00 8.42 ATOM 27 NE2 GLN 4 13.844 41.612 4.815 1.00 8.42 ATOM 28 C GLN 4 8.915 39.747 3.451 1.00 8.42 ATOM 29 O GLN 4 8.904 38.670 4.045 1.00 8.42 ATOM 30 N GLY 5 8.114 39.999 2.381 1.00 8.17 ATOM 31 CA GLY 5 7.054 39.107 1.977 1.00 8.17 ATOM 32 C GLY 5 5.742 39.531 2.575 1.00 8.17 ATOM 33 O GLY 5 5.394 39.216 3.711 1.00 8.17 ATOM 34 N PRO 6 5.022 40.275 1.771 1.00 7.86 ATOM 35 CA PRO 6 3.756 40.869 2.126 1.00 7.86 ATOM 36 CD PRO 6 5.216 40.221 0.332 1.00 7.86 ATOM 37 CB PRO 6 3.274 41.568 0.857 1.00 7.86 ATOM 38 CG PRO 6 3.895 40.725 -0.272 1.00 7.86 ATOM 39 C PRO 6 2.728 39.901 2.631 1.00 7.86 ATOM 40 O PRO 6 1.874 40.324 3.411 1.00 7.86 ATOM 41 N TRP 7 2.737 38.623 2.199 1.00 8.08 ATOM 42 CA TRP 7 1.698 37.774 2.700 1.00 8.08 ATOM 43 CB TRP 7 1.210 36.717 1.690 1.00 8.08 ATOM 44 CG TRP 7 0.445 37.275 0.510 1.00 8.08 ATOM 45 CD2 TRP 7 -0.950 37.618 0.547 1.00 8.08 ATOM 46 CD1 TRP 7 0.879 37.563 -0.751 1.00 8.08 ATOM 47 NE1 TRP 7 -0.158 38.064 -1.503 1.00 8.08 ATOM 48 CE2 TRP 7 -1.289 38.104 -0.715 1.00 8.08 ATOM 49 CE3 TRP 7 -1.872 37.537 1.552 1.00 8.08 ATOM 50 CZ2 TRP 7 -2.560 38.520 -0.993 1.00 8.08 ATOM 51 CZ3 TRP 7 -3.153 37.954 1.269 1.00 8.08 ATOM 52 CH2 TRP 7 -3.490 38.437 0.021 1.00 8.08 ATOM 53 C TRP 7 2.177 37.035 3.911 1.00 8.08 ATOM 54 O TRP 7 2.862 36.021 3.810 1.00 8.08 ATOM 55 N VAL 8 1.902 37.620 5.090 1.00 7.58 ATOM 56 CA VAL 8 1.938 37.020 6.397 1.00 7.58 ATOM 57 CB VAL 8 0.615 36.430 6.778 1.00 7.58 ATOM 58 CG1 VAL 8 -0.430 37.559 6.838 1.00 7.58 ATOM 59 CG2 VAL 8 0.283 35.324 5.764 1.00 7.58 ATOM 60 C VAL 8 2.987 35.967 6.638 1.00 7.58 ATOM 61 O VAL 8 2.628 34.896 7.129 1.00 7.58 ATOM 62 N GLY 9 4.269 36.212 6.292 1.00 7.86 ATOM 63 CA GLY 9 5.393 35.405 6.719 1.00 7.86 ATOM 64 C GLY 9 5.129 33.932 6.682 1.00 7.86 ATOM 65 O GLY 9 4.904 33.341 7.736 1.00 7.86 ATOM 66 N SER 10 5.189 33.296 5.496 1.00 7.76 ATOM 67 CA SER 10 4.848 31.904 5.369 1.00 7.76 ATOM 68 CB SER 10 5.142 31.350 3.967 1.00 7.76 ATOM 69 OG SER 10 4.785 29.980 3.910 1.00 7.76 ATOM 70 C SER 10 5.635 31.097 6.369 1.00 7.76 ATOM 71 O SER 10 5.112 30.128 6.921 1.00 7.76 ATOM 72 N SER 11 6.907 31.464 6.638 1.00 8.62 ATOM 73 CA SER 11 7.664 30.754 7.635 1.00 8.62 ATOM 74 CB SER 11 9.098 31.290 7.811 1.00 8.62 ATOM 75 OG SER 11 9.878 31.042 6.654 1.00 8.62 ATOM 76 C SER 11 7.004 30.932 8.971 1.00 8.62 ATOM 77 O SER 11 6.636 29.962 9.633 1.00 8.62 ATOM 78 N TYR 12 6.764 32.199 9.358 1.00 8.22 ATOM 79 CA TYR 12 6.250 32.558 10.652 1.00 8.22 ATOM 80 CB TYR 12 6.081 34.089 10.770 1.00 8.22 ATOM 81 CG TYR 12 5.260 34.457 11.957 1.00 8.22 ATOM 82 CD1 TYR 12 5.610 34.067 13.228 1.00 8.22 ATOM 83 CD2 TYR 12 4.148 35.250 11.788 1.00 8.22 ATOM 84 CE1 TYR 12 4.842 34.428 14.309 1.00 8.22 ATOM 85 CE2 TYR 12 3.375 35.615 12.863 1.00 8.22 ATOM 86 CZ TYR 12 3.723 35.204 14.127 1.00 8.22 ATOM 87 OH TYR 12 2.933 35.575 15.235 1.00 8.22 ATOM 88 C TYR 12 4.956 31.847 10.905 1.00 8.22 ATOM 89 O TYR 12 4.719 31.366 12.013 1.00 8.22 ATOM 90 N VAL 13 4.072 31.764 9.899 1.00 7.77 ATOM 91 CA VAL 13 2.828 31.071 10.093 1.00 7.77 ATOM 92 CB VAL 13 1.882 31.199 8.933 1.00 7.77 ATOM 93 CG1 VAL 13 1.528 32.685 8.748 1.00 7.77 ATOM 94 CG2 VAL 13 2.511 30.538 7.697 1.00 7.77 ATOM 95 C VAL 13 3.095 29.608 10.307 1.00 7.77 ATOM 96 O VAL 13 2.434 28.968 11.122 1.00 7.77 ATOM 97 N ALA 14 4.057 29.020 9.563 1.00 7.84 ATOM 98 CA ALA 14 4.311 27.612 9.708 1.00 7.84 ATOM 99 CB ALA 14 5.364 27.087 8.716 1.00 7.84 ATOM 100 C ALA 14 4.813 27.342 11.094 1.00 7.84 ATOM 101 O ALA 14 4.347 26.419 11.761 1.00 7.84 ATOM 102 N GLU 15 5.747 28.185 11.580 1.00 9.18 ATOM 103 CA GLU 15 6.365 27.989 12.860 1.00 9.18 ATOM 104 CB GLU 15 7.303 29.149 13.225 1.00 9.18 ATOM 105 CG GLU 15 8.074 28.955 14.529 1.00 9.18 ATOM 106 CD GLU 15 7.239 29.511 15.666 1.00 9.18 ATOM 107 OE1 GLU 15 6.346 30.353 15.383 1.00 9.18 ATOM 108 OE2 GLU 15 7.489 29.106 16.833 1.00 9.18 ATOM 109 C GLU 15 5.307 27.975 13.911 1.00 9.18 ATOM 110 O GLU 15 5.294 27.099 14.774 1.00 9.18 ATOM 111 N THR 16 4.410 28.974 13.860 1.00 8.35 ATOM 112 CA THR 16 3.325 29.120 14.786 1.00 8.35 ATOM 113 CB THR 16 2.659 30.461 14.671 1.00 8.35 ATOM 114 OG1 THR 16 1.600 30.550 15.605 1.00 8.35 ATOM 115 CG2 THR 16 2.149 30.688 13.241 1.00 8.35 ATOM 116 C THR 16 2.287 28.037 14.646 1.00 8.35 ATOM 117 O THR 16 1.810 27.530 15.660 1.00 8.35 ATOM 118 N GLY 17 1.884 27.650 13.413 1.00 7.90 ATOM 119 CA GLY 17 0.884 26.613 13.302 1.00 7.90 ATOM 120 C GLY 17 0.096 26.773 12.023 1.00 7.90 ATOM 121 O GLY 17 0.035 27.853 11.439 1.00 7.90 ATOM 122 N GLN 18 -0.613 25.691 11.627 1.00 7.81 ATOM 123 CA GLN 18 -1.305 25.531 10.370 1.00 7.81 ATOM 124 CB GLN 18 -1.855 24.112 10.112 1.00 7.81 ATOM 125 CG GLN 18 -2.906 23.626 11.109 1.00 7.81 ATOM 126 CD GLN 18 -2.172 22.818 12.163 1.00 7.81 ATOM 127 OE1 GLN 18 -2.784 22.173 13.014 1.00 7.81 ATOM 128 NE2 GLN 18 -0.813 22.839 12.096 1.00 7.81 ATOM 129 C GLN 18 -2.431 26.496 10.145 1.00 7.81 ATOM 130 O GLN 18 -2.771 26.745 8.988 1.00 7.81 ATOM 131 N ASN 19 -3.112 26.983 11.202 1.00 7.17 ATOM 132 CA ASN 19 -4.139 27.975 10.983 1.00 7.17 ATOM 133 CB ASN 19 -5.095 28.096 12.182 1.00 7.17 ATOM 134 CG ASN 19 -6.234 29.038 11.822 1.00 7.17 ATOM 135 OD1 ASN 19 -6.475 29.327 10.651 1.00 7.17 ATOM 136 ND2 ASN 19 -6.954 29.537 12.862 1.00 7.17 ATOM 137 C ASN 19 -3.373 29.260 10.898 1.00 7.17 ATOM 138 O ASN 19 -3.407 30.078 11.815 1.00 7.17 ATOM 139 N TRP 20 -2.759 29.497 9.723 1.00 7.66 ATOM 140 CA TRP 20 -1.690 30.442 9.541 1.00 7.66 ATOM 141 CB TRP 20 -1.258 30.485 8.059 1.00 7.66 ATOM 142 CG TRP 20 -2.401 30.791 7.114 1.00 7.66 ATOM 143 CD2 TRP 20 -2.645 32.056 6.473 1.00 7.66 ATOM 144 CD1 TRP 20 -3.384 29.948 6.682 1.00 7.66 ATOM 145 NE1 TRP 20 -4.245 30.616 5.846 1.00 7.66 ATOM 146 CE2 TRP 20 -3.798 31.912 5.702 1.00 7.66 ATOM 147 CE3 TRP 20 -1.974 33.243 6.536 1.00 7.66 ATOM 148 CZ2 TRP 20 -4.302 32.958 4.985 1.00 7.66 ATOM 149 CZ3 TRP 20 -2.473 34.287 5.786 1.00 7.66 ATOM 150 CH2 TRP 20 -3.616 34.150 5.032 1.00 7.66 ATOM 151 C TRP 20 -1.913 31.866 9.982 1.00 7.66 ATOM 152 O TRP 20 -1.443 32.258 11.049 1.00 7.66 ATOM 153 N ALA 21 -2.679 32.663 9.216 1.00 6.81 ATOM 154 CA ALA 21 -2.718 34.090 9.434 1.00 6.81 ATOM 155 CB ALA 21 -3.594 34.845 8.427 1.00 6.81 ATOM 156 C ALA 21 -3.310 34.452 10.747 1.00 6.81 ATOM 157 O ALA 21 -2.797 35.329 11.444 1.00 6.81 ATOM 158 N SER 22 -4.441 33.813 11.090 1.00 6.72 ATOM 159 CA SER 22 -5.160 34.158 12.283 1.00 6.72 ATOM 160 CB SER 22 -6.536 33.476 12.369 1.00 6.72 ATOM 161 OG SER 22 -7.192 33.859 13.569 1.00 6.72 ATOM 162 C SER 22 -4.387 33.748 13.496 1.00 6.72 ATOM 163 O SER 22 -4.310 34.504 14.463 1.00 6.72 ATOM 164 N LEU 23 -3.791 32.537 13.474 1.00 7.92 ATOM 165 CA LEU 23 -3.109 32.036 14.633 1.00 7.92 ATOM 166 CB LEU 23 -2.608 30.593 14.459 1.00 7.92 ATOM 167 CG LEU 23 -1.885 30.045 15.703 1.00 7.92 ATOM 168 CD1 LEU 23 -2.832 29.961 16.913 1.00 7.92 ATOM 169 CD2 LEU 23 -1.196 28.706 15.399 1.00 7.92 ATOM 170 C LEU 23 -1.929 32.905 14.933 1.00 7.92 ATOM 171 O LEU 23 -1.677 33.238 16.089 1.00 7.92 ATOM 172 N ALA 24 -1.179 33.304 13.890 1.00 7.47 ATOM 173 CA ALA 24 -0.025 34.140 14.061 1.00 7.47 ATOM 174 CB ALA 24 0.673 34.445 12.724 1.00 7.47 ATOM 175 C ALA 24 -0.451 35.451 14.658 1.00 7.47 ATOM 176 O ALA 24 0.216 35.987 15.541 1.00 7.47 ATOM 177 N ALA 25 -1.588 36.002 14.201 1.00 7.08 ATOM 178 CA ALA 25 -2.028 37.288 14.672 1.00 7.08 ATOM 179 CB ALA 25 -3.335 37.747 14.001 1.00 7.08 ATOM 180 C ALA 25 -2.280 37.233 16.148 1.00 7.08 ATOM 181 O ALA 25 -1.903 38.149 16.876 1.00 7.08 ATOM 182 N ASN 26 -2.934 36.158 16.629 1.00 7.72 ATOM 183 CA ASN 26 -3.254 36.043 18.024 1.00 7.72 ATOM 184 CB ASN 26 -4.188 34.860 18.336 1.00 7.72 ATOM 185 CG ASN 26 -5.592 35.231 17.883 1.00 7.72 ATOM 186 OD1 ASN 26 -6.095 36.309 18.198 1.00 7.72 ATOM 187 ND2 ASN 26 -6.247 34.316 17.121 1.00 7.72 ATOM 188 C ASN 26 -2.008 35.857 18.841 1.00 7.72 ATOM 189 O ASN 26 -1.888 36.433 19.921 1.00 7.72 ATOM 190 N GLU 27 -1.049 35.046 18.346 1.00 8.71 ATOM 191 CA GLU 27 0.139 34.722 19.085 1.00 8.71 ATOM 192 CB GLU 27 1.027 33.709 18.336 1.00 8.71 ATOM 193 CG GLU 27 2.025 32.960 19.224 1.00 8.71 ATOM 194 CD GLU 27 3.110 33.919 19.692 1.00 8.71 ATOM 195 OE1 GLU 27 3.518 34.794 18.885 1.00 8.71 ATOM 196 OE2 GLU 27 3.548 33.784 20.866 1.00 8.71 ATOM 197 C GLU 27 0.940 35.969 19.318 1.00 8.71 ATOM 198 O GLU 27 1.415 36.218 20.422 1.00 8.71 ATOM 199 N LEU 28 1.081 36.805 18.276 1.00 7.40 ATOM 200 CA LEU 28 1.818 38.039 18.320 1.00 7.40 ATOM 201 CB LEU 28 1.928 38.702 16.936 1.00 7.40 ATOM 202 CG LEU 28 2.712 40.026 16.930 1.00 7.40 ATOM 203 CD1 LEU 28 4.163 39.823 17.393 1.00 7.40 ATOM 204 CD2 LEU 28 2.635 40.705 15.553 1.00 7.40 ATOM 205 C LEU 28 1.115 38.977 19.252 1.00 7.40 ATOM 206 O LEU 28 1.715 39.905 19.790 1.00 7.40 ATOM 207 N ARG 29 -0.194 38.749 19.466 1.00 7.71 ATOM 208 CA ARG 29 -1.020 39.602 20.272 1.00 7.71 ATOM 209 CB ARG 29 -0.385 40.039 21.604 1.00 7.71 ATOM 210 CG ARG 29 -0.467 39.002 22.725 1.00 7.71 ATOM 211 CD ARG 29 0.358 37.741 22.469 1.00 7.71 ATOM 212 NE ARG 29 0.381 36.964 23.739 1.00 7.71 ATOM 213 CZ ARG 29 1.295 35.965 23.911 1.00 7.71 ATOM 214 NH1 ARG 29 2.165 35.649 22.908 1.00 7.71 ATOM 215 NH2 ARG 29 1.343 35.286 25.094 1.00 7.71 ATOM 216 C ARG 29 -1.363 40.848 19.531 1.00 7.71 ATOM 217 O ARG 29 -1.673 41.875 20.134 1.00 7.71 ATOM 218 N VAL 30 -1.306 40.788 18.192 1.00 7.74 ATOM 219 CA VAL 30 -1.840 41.857 17.410 1.00 7.74 ATOM 220 CB VAL 30 -1.416 41.864 15.969 1.00 7.74 ATOM 221 CG1 VAL 30 0.091 42.151 15.892 1.00 7.74 ATOM 222 CG2 VAL 30 -1.831 40.527 15.332 1.00 7.74 ATOM 223 C VAL 30 -3.313 41.607 17.429 1.00 7.74 ATOM 224 O VAL 30 -3.772 40.642 18.041 1.00 7.74 ATOM 225 N THR 31 -4.098 42.498 16.806 1.00 7.36 ATOM 226 CA THR 31 -5.518 42.312 16.764 1.00 7.36 ATOM 227 CB THR 31 -6.215 43.419 16.014 1.00 7.36 ATOM 228 OG1 THR 31 -5.775 44.677 16.488 1.00 7.36 ATOM 229 CG2 THR 31 -7.732 43.328 16.254 1.00 7.36 ATOM 230 C THR 31 -5.748 41.048 15.971 1.00 7.36 ATOM 231 O THR 31 -4.825 40.465 15.412 1.00 7.36 ATOM 232 N GLU 32 -7.024 40.633 15.903 1.00 8.26 ATOM 233 CA GLU 32 -7.630 39.479 15.296 1.00 8.26 ATOM 234 CB GLU 32 -9.104 39.284 15.699 1.00 8.26 ATOM 235 CG GLU 32 -9.679 37.929 15.273 1.00 8.26 ATOM 236 CD GLU 32 -8.991 36.844 16.090 1.00 8.26 ATOM 237 OE1 GLU 32 -9.453 36.565 17.229 1.00 8.26 ATOM 238 OE2 GLU 32 -7.985 36.277 15.582 1.00 8.26 ATOM 239 C GLU 32 -7.547 39.564 13.795 1.00 8.26 ATOM 240 O GLU 32 -8.295 38.872 13.102 1.00 8.26 ATOM 241 N ARG 33 -6.781 40.537 13.256 1.00 8.57 ATOM 242 CA ARG 33 -6.710 40.707 11.825 1.00 8.57 ATOM 243 CB ARG 33 -6.851 42.183 11.427 1.00 8.57 ATOM 244 CG ARG 33 -8.132 42.823 11.960 1.00 8.57 ATOM 245 CD ARG 33 -9.378 42.457 11.155 1.00 8.57 ATOM 246 NE ARG 33 -10.538 43.121 11.809 1.00 8.57 ATOM 247 CZ ARG 33 -11.153 42.508 12.861 1.00 8.57 ATOM 248 NH1 ARG 33 -10.689 41.305 13.310 1.00 8.57 ATOM 249 NH2 ARG 33 -12.226 43.098 13.465 1.00 8.57 ATOM 250 C ARG 33 -5.387 40.236 11.266 1.00 8.57 ATOM 251 O ARG 33 -4.319 40.694 11.666 1.00 8.57 ATOM 252 N PRO 34 -5.449 39.343 10.303 1.00 7.91 ATOM 253 CA PRO 34 -4.300 38.803 9.615 1.00 7.91 ATOM 254 CD PRO 34 -6.674 38.636 9.980 1.00 7.91 ATOM 255 CB PRO 34 -4.826 37.641 8.766 1.00 7.91 ATOM 256 CG PRO 34 -6.344 37.885 8.679 1.00 7.91 ATOM 257 C PRO 34 -3.647 39.883 8.807 1.00 7.91 ATOM 258 O PRO 34 -2.532 39.681 8.326 1.00 7.91 ATOM 259 N PHE 35 -4.347 41.017 8.619 1.00 8.70 ATOM 260 CA PHE 35 -3.861 42.152 7.888 1.00 8.70 ATOM 261 CB PHE 35 -4.922 43.266 7.806 1.00 8.70 ATOM 262 CG PHE 35 -4.449 44.326 6.872 1.00 8.70 ATOM 263 CD1 PHE 35 -4.614 44.170 5.515 1.00 8.70 ATOM 264 CD2 PHE 35 -3.857 45.475 7.344 1.00 8.70 ATOM 265 CE1 PHE 35 -4.190 45.140 4.639 1.00 8.70 ATOM 266 CE2 PHE 35 -3.431 46.449 6.472 1.00 8.70 ATOM 267 CZ PHE 35 -3.595 46.283 5.118 1.00 8.70 ATOM 268 C PHE 35 -2.681 42.689 8.642 1.00 8.70 ATOM 269 O PHE 35 -1.699 43.135 8.052 1.00 8.70 ATOM 270 N TRP 36 -2.764 42.678 9.985 1.00 7.13 ATOM 271 CA TRP 36 -1.701 43.178 10.812 1.00 7.13 ATOM 272 CB TRP 36 -2.038 43.115 12.312 1.00 7.13 ATOM 273 CG TRP 36 -3.062 44.127 12.763 1.00 7.13 ATOM 274 CD2 TRP 36 -2.710 45.441 13.216 1.00 7.13 ATOM 275 CD1 TRP 36 -4.421 44.039 12.843 1.00 7.13 ATOM 276 NE1 TRP 36 -4.939 45.222 13.316 1.00 7.13 ATOM 277 CE2 TRP 36 -3.895 46.094 13.552 1.00 7.13 ATOM 278 CE3 TRP 36 -1.496 46.052 13.339 1.00 7.13 ATOM 279 CZ2 TRP 36 -3.882 47.377 14.019 1.00 7.13 ATOM 280 CZ3 TRP 36 -1.485 47.343 13.814 1.00 7.13 ATOM 281 CH2 TRP 36 -2.656 47.992 14.147 1.00 7.13 ATOM 282 C TRP 36 -0.467 42.355 10.594 1.00 7.13 ATOM 283 O TRP 36 0.625 42.895 10.422 1.00 7.13 ATOM 284 N ILE 37 -0.605 41.016 10.590 1.00 7.05 ATOM 285 CA ILE 37 0.545 40.174 10.407 1.00 7.05 ATOM 286 CB ILE 37 0.220 38.711 10.485 1.00 7.05 ATOM 287 CG1 ILE 37 -0.352 38.373 11.871 1.00 7.05 ATOM 288 CG2 ILE 37 1.497 37.922 10.144 1.00 7.05 ATOM 289 CD1 ILE 37 0.619 38.673 13.013 1.00 7.05 ATOM 290 C ILE 37 1.111 40.444 9.046 1.00 7.05 ATOM 291 O ILE 37 2.327 40.492 8.872 1.00 7.05 ATOM 292 N SER 38 0.232 40.625 8.041 1.00 6.72 ATOM 293 CA SER 38 0.676 40.862 6.697 1.00 6.72 ATOM 294 CB SER 38 -0.454 40.837 5.650 1.00 6.72 ATOM 295 OG SER 38 -1.312 41.956 5.799 1.00 6.72 ATOM 296 C SER 38 1.366 42.194 6.628 1.00 6.72 ATOM 297 O SER 38 1.966 42.520 5.606 1.00 6.72 ATOM 298 N SER 39 1.195 43.053 7.654 1.00 7.26 ATOM 299 CA SER 39 1.915 44.300 7.727 1.00 7.26 ATOM 300 CB SER 39 1.243 45.313 8.670 1.00 7.26 ATOM 301 OG SER 39 -0.041 45.664 8.173 1.00 7.26 ATOM 302 C SER 39 3.320 44.080 8.232 1.00 7.26 ATOM 303 O SER 39 4.292 44.490 7.595 1.00 7.26 ATOM 304 N PHE 40 3.461 43.420 9.408 1.00 7.49 ATOM 305 CA PHE 40 4.765 43.243 9.995 1.00 7.49 ATOM 306 CB PHE 40 4.737 42.474 11.328 1.00 7.49 ATOM 307 CG PHE 40 4.063 43.332 12.342 1.00 7.49 ATOM 308 CD1 PHE 40 2.698 43.282 12.515 1.00 7.49 ATOM 309 CD2 PHE 40 4.802 44.194 13.118 1.00 7.49 ATOM 310 CE1 PHE 40 2.085 44.075 13.455 1.00 7.49 ATOM 311 CE2 PHE 40 4.193 44.991 14.060 1.00 7.49 ATOM 312 CZ PHE 40 2.831 44.934 14.227 1.00 7.49 ATOM 313 C PHE 40 5.590 42.448 9.048 1.00 7.49 ATOM 314 O PHE 40 6.650 42.887 8.604 1.00 7.49 ATOM 315 N ILE 41 5.102 41.253 8.686 1.00 7.13 ATOM 316 CA ILE 41 5.795 40.521 7.678 1.00 7.13 ATOM 317 CB ILE 41 5.265 39.133 7.464 1.00 7.13 ATOM 318 CG1 ILE 41 5.310 38.334 8.778 1.00 7.13 ATOM 319 CG2 ILE 41 6.077 38.491 6.327 1.00 7.13 ATOM 320 CD1 ILE 41 6.707 38.191 9.376 1.00 7.13 ATOM 321 C ILE 41 5.513 41.315 6.446 1.00 7.13 ATOM 322 O ILE 41 4.378 41.739 6.224 1.00 7.13 ATOM 323 N GLY 42 6.549 41.573 5.629 1.00 8.06 ATOM 324 CA GLY 42 6.376 42.378 4.456 1.00 8.06 ATOM 325 C GLY 42 7.055 43.702 4.671 1.00 8.06 ATOM 326 O GLY 42 7.497 44.329 3.710 1.00 8.06 ATOM 327 N ARG 43 7.166 44.179 5.929 1.00 7.76 ATOM 328 CA ARG 43 7.843 45.435 6.116 1.00 7.76 ATOM 329 CB ARG 43 7.013 46.463 6.907 1.00 7.76 ATOM 330 CG ARG 43 5.732 46.916 6.203 1.00 7.76 ATOM 331 CD ARG 43 4.923 47.933 7.012 1.00 7.76 ATOM 332 NE ARG 43 3.718 48.287 6.212 1.00 7.76 ATOM 333 CZ ARG 43 2.840 49.227 6.669 1.00 7.76 ATOM 334 NH1 ARG 43 3.065 49.853 7.861 1.00 7.76 ATOM 335 NH2 ARG 43 1.738 49.547 5.929 1.00 7.76 ATOM 336 C ARG 43 9.080 45.182 6.927 1.00 7.76 ATOM 337 O ARG 43 8.993 45.025 8.141 1.00 7.76 ATOM 338 N SER 44 10.274 45.183 6.293 1.00 7.64 ATOM 339 CA SER 44 11.500 44.943 7.019 1.00 7.64 ATOM 340 CB SER 44 12.618 44.385 6.122 1.00 7.64 ATOM 341 OG SER 44 12.892 45.291 5.063 1.00 7.64 ATOM 342 C SER 44 11.962 46.260 7.579 1.00 7.64 ATOM 343 O SER 44 12.940 46.846 7.118 1.00 7.64 ATOM 344 N LYS 45 11.321 46.682 8.686 1.00 6.09 ATOM 345 CA LYS 45 11.430 48.014 9.221 1.00 6.09 ATOM 346 CB LYS 45 10.538 48.205 10.458 1.00 6.09 ATOM 347 CG LYS 45 10.515 49.637 10.991 1.00 6.09 ATOM 348 CD LYS 45 9.445 49.858 12.061 1.00 6.09 ATOM 349 CE LYS 45 8.028 49.549 11.574 1.00 6.09 ATOM 350 NZ LYS 45 7.078 49.620 12.706 1.00 6.09 ATOM 351 C LYS 45 12.807 48.455 9.635 1.00 6.09 ATOM 352 O LYS 45 13.277 49.494 9.170 1.00 6.09 TER END