####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS145_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.95 6.62 LCS_AVERAGE: 75.10 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.57 8.12 LCS_AVERAGE: 23.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.46 7.94 LCS_AVERAGE: 17.36 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 17 3 4 5 5 13 17 19 23 25 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT V 3 V 3 5 6 25 3 5 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT Q 4 Q 4 5 6 25 3 5 5 7 8 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT G 5 G 5 5 6 25 0 3 5 6 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT P 6 P 6 5 6 25 3 3 5 7 11 12 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT W 7 W 7 5 6 25 3 3 6 6 8 9 12 19 26 28 29 30 31 32 33 36 38 40 41 41 LCS_GDT V 8 V 8 3 12 35 3 3 3 7 11 17 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT G 9 G 9 10 12 35 9 9 9 10 11 15 17 23 25 27 29 31 33 35 36 37 38 40 41 41 LCS_GDT S 10 S 10 10 12 35 9 9 9 10 11 12 14 16 21 24 27 30 33 35 36 37 38 40 41 41 LCS_GDT S 11 S 11 10 12 35 9 9 9 10 11 12 15 20 21 24 27 30 33 35 36 37 38 40 41 41 LCS_GDT Y 12 Y 12 10 12 35 9 9 9 10 11 12 15 20 21 24 29 31 33 35 36 37 38 40 41 41 LCS_GDT V 13 V 13 10 12 35 9 9 9 10 11 12 15 20 21 24 27 31 33 35 36 37 38 40 41 41 LCS_GDT A 14 A 14 10 12 35 9 9 9 10 11 12 14 17 20 22 25 28 32 33 35 37 38 40 41 41 LCS_GDT E 15 E 15 10 12 35 9 9 9 10 11 12 14 17 20 22 24 26 32 33 34 35 38 40 41 41 LCS_GDT T 16 T 16 10 12 35 9 9 9 10 11 12 14 17 20 22 24 29 33 35 36 37 38 40 41 41 LCS_GDT G 17 G 17 10 12 35 9 9 9 10 11 12 14 17 20 23 27 30 33 35 36 37 38 40 41 41 LCS_GDT Q 18 Q 18 10 12 35 3 3 6 10 11 12 14 17 21 24 27 31 33 35 36 37 38 40 41 41 LCS_GDT N 19 N 19 4 13 35 3 3 4 4 7 12 16 21 26 27 29 31 33 35 36 37 38 40 41 41 LCS_GDT W 20 W 20 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT A 21 A 21 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT S 22 S 22 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT L 23 L 23 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT A 24 A 24 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT A 25 A 25 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT N 26 N 26 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT E 27 E 27 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT L 28 L 28 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT R 29 R 29 12 14 35 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT V 30 V 30 12 14 35 8 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT T 31 T 31 12 14 35 9 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT E 32 E 32 3 14 35 3 5 5 7 7 15 21 24 25 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT R 33 R 33 3 14 35 3 3 3 9 15 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT P 34 P 34 3 6 35 2 3 3 5 8 13 19 24 25 27 29 30 31 32 33 36 38 40 41 41 LCS_GDT F 35 F 35 3 6 35 3 3 3 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT W 36 W 36 6 7 35 3 4 6 6 14 18 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT I 37 I 37 6 7 35 3 4 6 6 8 17 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT S 38 S 38 6 7 35 4 4 6 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT S 39 S 39 6 7 35 4 4 10 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT F 40 F 40 6 7 35 4 4 6 6 15 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT I 41 I 41 6 7 35 4 10 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 LCS_GDT G 42 G 42 3 7 35 3 3 5 7 11 11 16 20 21 24 28 30 32 34 36 37 38 40 41 41 LCS_GDT R 43 R 43 3 4 34 3 3 4 4 4 5 6 10 13 15 17 24 31 33 34 35 36 37 38 39 LCS_GDT S 44 S 44 3 4 27 3 3 3 3 4 5 6 8 11 15 19 24 25 25 30 32 36 37 38 38 LCS_GDT K 45 K 45 0 3 26 0 0 3 3 4 5 5 8 9 10 13 14 16 22 22 28 29 32 36 37 LCS_AVERAGE LCS_A: 38.50 ( 17.36 23.04 75.10 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 14 16 19 24 25 26 28 29 31 33 35 36 37 38 40 41 41 GDT PERCENT_AT 22.73 27.27 29.55 31.82 36.36 43.18 54.55 56.82 59.09 63.64 65.91 70.45 75.00 79.55 81.82 84.09 86.36 90.91 93.18 93.18 GDT RMS_LOCAL 0.38 0.46 0.72 0.89 1.25 1.68 2.21 2.31 2.43 2.75 2.88 3.89 4.27 4.57 4.75 4.86 4.99 5.33 5.52 5.52 GDT RMS_ALL_AT 7.88 7.94 7.69 7.65 8.11 8.46 8.36 8.34 8.42 8.37 8.47 7.16 6.87 6.87 6.81 6.72 6.92 6.74 6.70 6.70 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.824 0 0.260 0.338 7.409 5.455 4.364 - LGA V 3 V 3 1.545 0 0.641 0.567 5.145 40.909 34.286 5.145 LGA Q 4 Q 4 2.767 0 0.601 0.748 9.722 41.818 19.192 7.262 LGA G 5 G 5 2.256 0 0.265 0.265 5.333 21.818 21.818 - LGA P 6 P 6 3.488 0 0.061 0.249 4.028 14.545 13.247 3.889 LGA W 7 W 7 4.719 0 0.524 1.421 16.119 4.545 1.299 16.119 LGA V 8 V 8 3.640 0 0.579 0.556 6.809 8.636 5.974 4.207 LGA G 9 G 9 6.599 0 0.464 0.464 8.473 0.455 0.455 - LGA S 10 S 10 12.844 0 0.056 0.609 15.528 0.000 0.000 15.528 LGA S 11 S 11 12.289 0 0.182 0.777 13.550 0.000 0.000 11.219 LGA Y 12 Y 12 9.074 0 0.036 1.055 10.539 0.000 0.000 6.980 LGA V 13 V 13 11.315 0 0.105 0.117 14.417 0.000 0.000 14.086 LGA A 14 A 14 17.694 0 0.090 0.089 19.986 0.000 0.000 - LGA E 15 E 15 17.491 0 0.035 1.520 19.122 0.000 0.000 19.122 LGA T 16 T 16 14.540 0 0.049 0.082 15.150 0.000 0.000 9.948 LGA G 17 G 17 15.057 0 0.623 0.623 15.057 0.000 0.000 - LGA Q 18 Q 18 11.717 0 0.653 0.685 17.698 0.000 0.000 14.068 LGA N 19 N 19 7.139 0 0.145 0.350 11.324 1.818 0.909 10.965 LGA W 20 W 20 1.432 0 0.633 0.566 8.945 45.455 15.325 8.945 LGA A 21 A 21 1.360 0 0.062 0.069 1.360 65.455 65.455 - LGA S 22 S 22 0.577 0 0.034 0.088 0.968 81.818 84.848 0.428 LGA L 23 L 23 1.796 0 0.154 0.243 3.405 54.545 38.636 3.267 LGA A 24 A 24 1.787 0 0.032 0.038 1.843 50.909 50.909 - LGA A 25 A 25 0.852 0 0.010 0.024 1.169 77.727 78.545 - LGA N 26 N 26 0.864 0 0.047 0.326 0.970 81.818 81.818 0.884 LGA E 27 E 27 1.262 0 0.117 0.908 5.861 69.545 42.424 5.861 LGA L 28 L 28 0.658 0 0.074 1.414 4.482 86.818 57.955 3.920 LGA R 29 R 29 0.794 0 0.127 1.920 8.705 77.727 39.339 8.705 LGA V 30 V 30 0.768 0 0.288 0.328 2.598 78.636 61.558 2.208 LGA T 31 T 31 0.463 0 0.291 0.288 2.758 74.545 59.221 2.758 LGA E 32 E 32 5.293 0 0.575 1.209 9.485 8.182 3.636 8.502 LGA R 33 R 33 3.291 0 0.162 1.212 9.297 5.909 5.785 9.297 LGA P 34 P 34 5.594 0 0.565 0.643 7.402 0.455 0.260 7.402 LGA F 35 F 35 2.502 0 0.649 1.370 7.600 34.545 13.058 7.600 LGA W 36 W 36 3.481 0 0.634 0.770 12.931 31.364 9.091 12.800 LGA I 37 I 37 3.312 0 0.127 0.551 5.593 36.364 19.773 5.465 LGA S 38 S 38 2.472 0 0.068 0.657 3.997 35.455 27.273 3.775 LGA S 39 S 39 3.025 0 0.145 0.696 5.016 20.000 16.667 4.671 LGA F 40 F 40 3.911 0 0.162 0.453 10.099 12.273 4.959 10.054 LGA I 41 I 41 2.521 0 0.643 0.935 5.443 16.818 13.409 4.753 LGA G 42 G 42 8.737 0 0.685 0.685 12.340 0.000 0.000 - LGA R 43 R 43 14.453 0 0.559 1.596 16.917 0.000 0.000 15.723 LGA S 44 S 44 18.350 0 0.667 0.965 20.718 0.000 0.000 20.360 LGA K 45 K 45 19.273 0 0.694 1.093 24.725 0.000 0.000 24.725 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.529 6.570 7.982 26.963 20.261 8.779 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 25 2.31 50.000 44.216 1.038 LGA_LOCAL RMSD: 2.308 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.336 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.529 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.257628 * X + -0.150723 * Y + 0.954416 * Z + -31.185410 Y_new = 0.960501 * X + 0.067585 * Y + 0.269943 * Z + -33.974945 Z_new = -0.105191 * X + 0.986263 * Y + 0.127357 * Z + -79.333824 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.832850 0.105386 1.442376 [DEG: 105.0146 6.0382 82.6420 ] ZXZ: 1.846433 1.443092 -0.106254 [DEG: 105.7928 82.6831 -6.0879 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS145_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 25 2.31 44.216 6.53 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS145_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 8.568 41.327 10.713 1.00 3.46 ATOM 19 CA ALA 2 8.067 40.215 9.921 1.00 3.46 ATOM 21 CB ALA 2 8.434 40.577 8.467 1.00 3.46 ATOM 25 C ALA 2 8.720 38.892 10.345 1.00 3.46 ATOM 26 O ALA 2 9.817 38.581 9.882 1.00 3.46 ATOM 27 N VAL 3 8.049 38.107 11.200 1.00 3.54 ATOM 29 CA VAL 3 8.574 36.883 11.856 1.00 3.54 ATOM 31 CB VAL 3 7.443 36.062 12.519 1.00 3.54 ATOM 33 CG1 VAL 3 7.994 34.975 13.451 1.00 3.54 ATOM 37 CG2 VAL 3 6.506 36.943 13.358 1.00 3.54 ATOM 41 C VAL 3 9.410 35.974 10.938 1.00 3.54 ATOM 42 O VAL 3 10.371 35.366 11.398 1.00 3.54 ATOM 43 N GLN 4 9.082 35.904 9.642 1.00 3.56 ATOM 45 CA GLN 4 9.833 35.147 8.631 1.00 3.56 ATOM 47 CB GLN 4 9.176 33.763 8.453 1.00 3.56 ATOM 50 CG GLN 4 8.923 32.948 9.735 1.00 3.56 ATOM 53 CD GLN 4 8.112 31.688 9.450 1.00 3.56 ATOM 54 OE1 GLN 4 8.417 30.904 8.569 1.00 3.56 ATOM 55 NE2 GLN 4 7.022 31.462 10.151 1.00 3.56 ATOM 58 C GLN 4 9.909 35.873 7.267 1.00 3.56 ATOM 59 O GLN 4 10.150 35.242 6.238 1.00 3.56 ATOM 60 N GLY 5 9.609 37.176 7.213 1.00 3.34 ATOM 62 CA GLY 5 9.175 37.815 5.959 1.00 3.34 ATOM 65 C GLY 5 7.912 37.135 5.397 1.00 3.34 ATOM 66 O GLY 5 6.917 37.095 6.118 1.00 3.34 ATOM 67 N PRO 6 7.916 36.599 4.155 1.00 3.61 ATOM 68 CD PRO 6 9.088 36.368 3.323 1.00 3.61 ATOM 71 CG PRO 6 8.648 35.351 2.274 1.00 3.61 ATOM 74 CB PRO 6 7.182 35.703 2.037 1.00 3.61 ATOM 77 CA PRO 6 6.708 36.284 3.376 1.00 3.61 ATOM 79 C PRO 6 5.617 35.419 4.034 1.00 3.61 ATOM 80 O PRO 6 4.480 35.498 3.578 1.00 3.61 ATOM 81 N TRP 7 5.935 34.665 5.098 1.00 3.25 ATOM 83 CA TRP 7 5.041 33.759 5.842 1.00 3.25 ATOM 85 CB TRP 7 5.637 33.517 7.230 1.00 3.25 ATOM 88 CG TRP 7 4.771 32.883 8.278 1.00 3.25 ATOM 89 CD1 TRP 7 4.255 31.633 8.246 1.00 3.25 ATOM 91 NE1 TRP 7 3.599 31.374 9.437 1.00 3.25 ATOM 93 CE2 TRP 7 3.645 32.452 10.292 1.00 3.25 ATOM 94 CZ2 TRP 7 3.168 32.671 11.593 1.00 3.25 ATOM 96 CH2 TRP 7 3.360 33.930 12.188 1.00 3.25 ATOM 98 CZ3 TRP 7 4.018 34.950 11.476 1.00 3.25 ATOM 100 CE3 TRP 7 4.518 34.707 10.181 1.00 3.25 ATOM 102 CD2 TRP 7 4.354 33.450 9.560 1.00 3.25 ATOM 103 C TRP 7 3.571 34.172 5.918 1.00 3.25 ATOM 104 O TRP 7 2.739 33.332 5.602 1.00 3.25 ATOM 105 N VAL 8 3.250 35.425 6.281 1.00 2.82 ATOM 107 CA VAL 8 1.873 35.947 6.162 1.00 2.82 ATOM 109 CB VAL 8 0.993 35.660 7.405 1.00 2.82 ATOM 111 CG1 VAL 8 -0.429 36.229 7.238 1.00 2.82 ATOM 115 CG2 VAL 8 0.798 34.156 7.634 1.00 2.82 ATOM 119 C VAL 8 1.788 37.428 5.812 1.00 2.82 ATOM 120 O VAL 8 1.946 38.289 6.671 1.00 2.82 ATOM 121 N GLY 9 1.382 37.723 4.579 1.00 2.60 ATOM 123 CA GLY 9 0.751 39.002 4.241 1.00 2.60 ATOM 126 C GLY 9 -0.479 38.811 3.368 1.00 2.60 ATOM 127 O GLY 9 -0.904 37.678 3.209 1.00 2.60 ATOM 128 N SER 10 -1.071 39.873 2.808 1.00 2.37 ATOM 130 CA SER 10 -2.339 39.765 2.051 1.00 2.37 ATOM 132 CB SER 10 -2.761 41.123 1.477 1.00 2.37 ATOM 135 OG SER 10 -3.018 42.033 2.536 1.00 2.37 ATOM 137 C SER 10 -2.336 38.679 0.962 1.00 2.37 ATOM 138 O SER 10 -3.375 38.059 0.735 1.00 2.37 ATOM 139 N SER 11 -1.164 38.405 0.373 1.00 2.25 ATOM 141 CA SER 11 -0.861 37.182 -0.376 1.00 2.25 ATOM 143 CB SER 11 0.595 37.214 -0.854 1.00 2.25 ATOM 146 OG SER 11 1.475 37.568 0.205 1.00 2.25 ATOM 148 C SER 11 -1.159 35.907 0.418 1.00 2.25 ATOM 149 O SER 11 -2.203 35.315 0.183 1.00 2.25 ATOM 150 N TYR 12 -0.335 35.517 1.400 1.00 1.88 ATOM 152 CA TYR 12 -0.532 34.242 2.106 1.00 1.88 ATOM 154 CB TYR 12 0.662 33.867 2.991 1.00 1.88 ATOM 157 CG TYR 12 1.003 32.386 2.924 1.00 1.88 ATOM 158 CD1 TYR 12 1.493 31.834 1.722 1.00 1.88 ATOM 160 CE1 TYR 12 1.795 30.461 1.640 1.00 1.88 ATOM 162 CZ TYR 12 1.631 29.633 2.768 1.00 1.88 ATOM 163 OH TYR 12 1.923 28.305 2.698 1.00 1.88 ATOM 165 CE2 TYR 12 1.148 30.184 3.976 1.00 1.88 ATOM 167 CD2 TYR 12 0.824 31.553 4.045 1.00 1.88 ATOM 169 C TYR 12 -1.885 34.115 2.826 1.00 1.88 ATOM 170 O TYR 12 -2.414 33.011 2.935 1.00 1.88 ATOM 171 N VAL 13 -2.506 35.231 3.234 1.00 1.50 ATOM 173 CA VAL 13 -3.932 35.298 3.597 1.00 1.50 ATOM 175 CB VAL 13 -4.385 36.731 3.967 1.00 1.50 ATOM 177 CG1 VAL 13 -5.875 36.771 4.345 1.00 1.50 ATOM 181 CG2 VAL 13 -3.559 37.352 5.103 1.00 1.50 ATOM 185 C VAL 13 -4.781 34.772 2.439 1.00 1.50 ATOM 186 O VAL 13 -5.414 33.734 2.588 1.00 1.50 ATOM 187 N ALA 14 -4.806 35.436 1.280 1.00 2.01 ATOM 189 CA ALA 14 -5.626 34.993 0.152 1.00 2.01 ATOM 191 CB ALA 14 -5.490 36.025 -0.973 1.00 2.01 ATOM 195 C ALA 14 -5.306 33.566 -0.359 1.00 2.01 ATOM 196 O ALA 14 -6.187 32.911 -0.908 1.00 2.01 ATOM 197 N GLU 15 -4.078 33.079 -0.161 1.00 2.11 ATOM 199 CA GLU 15 -3.629 31.727 -0.509 1.00 2.11 ATOM 201 CB GLU 15 -2.087 31.682 -0.560 1.00 2.11 ATOM 204 CG GLU 15 -1.450 32.545 -1.666 1.00 2.11 ATOM 207 CD GLU 15 0.071 32.693 -1.473 1.00 2.11 ATOM 208 OE1 GLU 15 0.778 31.668 -1.580 1.00 2.11 ATOM 209 OE2 GLU 15 0.530 33.832 -1.209 1.00 2.11 ATOM 210 C GLU 15 -4.111 30.647 0.477 1.00 2.11 ATOM 211 O GLU 15 -4.347 29.515 0.051 1.00 2.11 ATOM 212 N THR 16 -4.273 30.953 1.777 1.00 1.85 ATOM 214 CA THR 16 -4.488 29.884 2.795 1.00 1.85 ATOM 216 CB THR 16 -3.236 29.607 3.642 1.00 1.85 ATOM 218 CG2 THR 16 -2.028 29.214 2.794 1.00 1.85 ATOM 222 OG1 THR 16 -2.860 30.719 4.409 1.00 1.85 ATOM 224 C THR 16 -5.727 30.065 3.669 1.00 1.85 ATOM 225 O THR 16 -6.118 29.184 4.436 1.00 1.85 ATOM 226 N GLY 17 -6.400 31.192 3.492 1.00 1.80 ATOM 228 CA GLY 17 -7.608 31.621 4.164 1.00 1.80 ATOM 231 C GLY 17 -7.331 32.676 5.251 1.00 1.80 ATOM 232 O GLY 17 -6.306 32.686 5.956 1.00 1.80 ATOM 233 N GLN 18 -8.352 33.512 5.469 1.00 1.67 ATOM 235 CA GLN 18 -8.442 34.390 6.641 1.00 1.67 ATOM 237 CB GLN 18 -9.810 35.095 6.673 1.00 1.67 ATOM 240 CG GLN 18 -10.006 36.145 5.561 1.00 1.67 ATOM 243 CD GLN 18 -9.210 37.439 5.756 1.00 1.67 ATOM 244 OE1 GLN 18 -8.518 37.660 6.733 1.00 1.67 ATOM 245 NE2 GLN 18 -9.289 38.366 4.825 1.00 1.67 ATOM 248 C GLN 18 -8.193 33.625 7.954 1.00 1.67 ATOM 249 O GLN 18 -7.669 34.199 8.900 1.00 1.67 ATOM 250 N ASN 19 -8.497 32.321 8.003 1.00 1.71 ATOM 252 CA ASN 19 -8.160 31.421 9.106 1.00 1.71 ATOM 254 CB ASN 19 -8.727 30.017 8.811 1.00 1.71 ATOM 257 CG ASN 19 -10.236 30.005 8.613 1.00 1.71 ATOM 258 OD1 ASN 19 -10.751 30.564 7.659 1.00 1.71 ATOM 259 ND2 ASN 19 -10.994 29.377 9.483 1.00 1.71 ATOM 262 C ASN 19 -6.651 31.372 9.421 1.00 1.71 ATOM 263 O ASN 19 -6.257 31.730 10.531 1.00 1.71 ATOM 264 N TRP 20 -5.790 30.998 8.465 1.00 1.48 ATOM 266 CA TRP 20 -4.334 30.966 8.689 1.00 1.48 ATOM 268 CB TRP 20 -3.641 30.177 7.579 1.00 1.48 ATOM 271 CG TRP 20 -3.713 28.692 7.780 1.00 1.48 ATOM 272 CD1 TRP 20 -4.512 27.838 7.103 1.00 1.48 ATOM 274 NE1 TRP 20 -4.341 26.554 7.580 1.00 1.48 ATOM 276 CE2 TRP 20 -3.412 26.511 8.596 1.00 1.48 ATOM 277 CZ2 TRP 20 -2.911 25.467 9.387 1.00 1.48 ATOM 279 CH2 TRP 20 -1.951 25.757 10.373 1.00 1.48 ATOM 281 CZ3 TRP 20 -1.509 27.081 10.548 1.00 1.48 ATOM 283 CE3 TRP 20 -2.018 28.119 9.742 1.00 1.48 ATOM 285 CD2 TRP 20 -2.985 27.865 8.744 1.00 1.48 ATOM 286 C TRP 20 -3.741 32.356 8.904 1.00 1.48 ATOM 287 O TRP 20 -2.832 32.505 9.724 1.00 1.48 ATOM 288 N ALA 21 -4.327 33.394 8.292 1.00 1.12 ATOM 290 CA ALA 21 -3.943 34.762 8.662 1.00 1.12 ATOM 292 CB ALA 21 -4.697 35.717 7.749 1.00 1.12 ATOM 296 C ALA 21 -4.202 35.099 10.152 1.00 1.12 ATOM 297 O ALA 21 -3.349 35.682 10.822 1.00 1.12 ATOM 298 N SER 22 -5.379 34.737 10.680 1.00 1.13 ATOM 300 CA SER 22 -5.746 34.972 12.082 1.00 1.13 ATOM 302 CB SER 22 -7.254 34.789 12.314 1.00 1.13 ATOM 305 OG SER 22 -7.685 33.447 12.217 1.00 1.13 ATOM 307 C SER 22 -4.902 34.162 13.077 1.00 1.13 ATOM 308 O SER 22 -4.505 34.706 14.111 1.00 1.13 ATOM 309 N LEU 23 -4.530 32.923 12.721 1.00 1.26 ATOM 311 CA LEU 23 -3.526 32.145 13.458 1.00 1.26 ATOM 313 CB LEU 23 -3.365 30.748 12.826 1.00 1.26 ATOM 316 CG LEU 23 -4.552 29.800 13.082 1.00 1.26 ATOM 318 CD1 LEU 23 -4.421 28.538 12.230 1.00 1.26 ATOM 322 CD2 LEU 23 -4.631 29.359 14.547 1.00 1.26 ATOM 326 C LEU 23 -2.190 32.897 13.545 1.00 1.26 ATOM 327 O LEU 23 -1.779 33.247 14.647 1.00 1.26 ATOM 328 N ALA 24 -1.600 33.282 12.407 1.00 1.20 ATOM 330 CA ALA 24 -0.317 33.996 12.403 1.00 1.20 ATOM 332 CB ALA 24 0.086 34.229 10.951 1.00 1.20 ATOM 336 C ALA 24 -0.330 35.322 13.196 1.00 1.20 ATOM 337 O ALA 24 0.647 35.661 13.873 1.00 1.20 ATOM 338 N ALA 25 -1.448 36.060 13.143 1.00 1.07 ATOM 340 CA ALA 25 -1.652 37.270 13.944 1.00 1.07 ATOM 342 CB ALA 25 -2.970 37.936 13.523 1.00 1.07 ATOM 346 C ALA 25 -1.645 36.973 15.449 1.00 1.07 ATOM 347 O ALA 25 -0.977 37.670 16.214 1.00 1.07 ATOM 348 N ASN 26 -2.355 35.933 15.882 1.00 1.23 ATOM 350 CA ASN 26 -2.442 35.585 17.298 1.00 1.23 ATOM 352 CB ASN 26 -3.723 34.765 17.510 1.00 1.23 ATOM 355 CG ASN 26 -4.930 35.689 17.628 1.00 1.23 ATOM 356 OD1 ASN 26 -4.932 36.836 17.208 1.00 1.23 ATOM 357 ND2 ASN 26 -5.936 35.278 18.360 1.00 1.23 ATOM 360 C ASN 26 -1.153 34.945 17.850 1.00 1.23 ATOM 361 O ASN 26 -0.842 35.158 19.023 1.00 1.23 ATOM 362 N GLU 27 -0.370 34.265 17.010 1.00 1.55 ATOM 364 CA GLU 27 0.999 33.788 17.271 1.00 1.55 ATOM 366 CB GLU 27 1.476 32.919 16.093 1.00 1.55 ATOM 369 CG GLU 27 0.772 31.557 15.983 1.00 1.55 ATOM 372 CD GLU 27 1.100 30.883 14.643 1.00 1.55 ATOM 373 OE1 GLU 27 0.165 30.660 13.840 1.00 1.55 ATOM 374 OE2 GLU 27 2.297 30.590 14.418 1.00 1.55 ATOM 375 C GLU 27 1.987 34.950 17.463 1.00 1.55 ATOM 376 O GLU 27 2.749 34.968 18.430 1.00 1.55 ATOM 377 N LEU 28 1.908 35.979 16.607 1.00 1.68 ATOM 379 CA LEU 28 2.574 37.279 16.802 1.00 1.68 ATOM 381 CB LEU 28 2.465 38.043 15.463 1.00 1.68 ATOM 384 CG LEU 28 3.112 39.438 15.411 1.00 1.68 ATOM 386 CD1 LEU 28 4.611 39.420 15.705 1.00 1.68 ATOM 390 CD2 LEU 28 2.906 40.076 14.042 1.00 1.68 ATOM 394 C LEU 28 1.997 38.077 18.002 1.00 1.68 ATOM 395 O LEU 28 2.522 39.128 18.369 1.00 1.68 ATOM 396 N ARG 29 0.898 37.607 18.615 1.00 1.88 ATOM 398 CA ARG 29 0.040 38.320 19.580 1.00 1.88 ATOM 400 CB ARG 29 0.686 38.306 20.981 1.00 1.88 ATOM 403 CG ARG 29 0.408 37.009 21.755 1.00 1.88 ATOM 406 CD ARG 29 -1.007 36.953 22.362 1.00 1.88 ATOM 409 NE ARG 29 -2.069 36.602 21.396 1.00 1.88 ATOM 411 CZ ARG 29 -3.088 37.357 21.010 1.00 1.88 ATOM 412 NH1 ARG 29 -4.102 36.836 20.401 1.00 1.88 ATOM 415 NH2 ARG 29 -3.136 38.642 21.164 1.00 1.88 ATOM 418 C ARG 29 -0.496 39.693 19.146 1.00 1.88 ATOM 419 O ARG 29 -1.085 40.399 19.968 1.00 1.88 ATOM 420 N VAL 30 -0.405 40.049 17.864 1.00 1.99 ATOM 422 CA VAL 30 -0.851 41.336 17.301 1.00 1.99 ATOM 424 CB VAL 30 0.116 41.839 16.202 1.00 1.99 ATOM 426 CG1 VAL 30 -0.350 43.053 15.383 1.00 1.99 ATOM 430 CG2 VAL 30 1.407 42.314 16.894 1.00 1.99 ATOM 434 C VAL 30 -2.351 41.353 16.967 1.00 1.99 ATOM 435 O VAL 30 -2.803 41.463 15.828 1.00 1.99 ATOM 436 N THR 31 -3.140 41.391 18.040 1.00 2.77 ATOM 438 CA THR 31 -4.470 42.024 18.101 1.00 2.77 ATOM 440 CB THR 31 -4.347 43.561 18.106 1.00 2.77 ATOM 442 CG2 THR 31 -3.476 44.096 19.242 1.00 2.77 ATOM 446 OG1 THR 31 -3.787 44.033 16.892 1.00 2.77 ATOM 448 C THR 31 -5.506 41.546 17.076 1.00 2.77 ATOM 449 O THR 31 -6.212 42.364 16.488 1.00 2.77 ATOM 450 N GLU 32 -5.601 40.230 16.888 1.00 3.05 ATOM 452 CA GLU 32 -6.779 39.528 16.345 1.00 3.05 ATOM 454 CB GLU 32 -7.952 39.550 17.361 1.00 3.05 ATOM 457 CG GLU 32 -7.637 39.743 18.863 1.00 3.05 ATOM 460 CD GLU 32 -6.536 38.832 19.428 1.00 3.05 ATOM 461 OE1 GLU 32 -5.390 39.313 19.623 1.00 3.05 ATOM 462 OE2 GLU 32 -6.790 37.641 19.711 1.00 3.05 ATOM 463 C GLU 32 -7.200 39.953 14.915 1.00 3.05 ATOM 464 O GLU 32 -8.345 39.756 14.512 1.00 3.05 ATOM 465 N ARG 33 -6.292 40.564 14.130 1.00 2.76 ATOM 467 CA ARG 33 -6.609 41.285 12.882 1.00 2.76 ATOM 469 CB ARG 33 -6.630 42.798 13.150 1.00 2.76 ATOM 472 CG ARG 33 -7.915 43.190 13.911 1.00 2.76 ATOM 475 CD ARG 33 -7.928 44.655 14.349 1.00 2.76 ATOM 478 NE ARG 33 -6.810 44.973 15.259 1.00 2.76 ATOM 480 CZ ARG 33 -6.310 46.178 15.466 1.00 2.76 ATOM 481 NH1 ARG 33 -5.200 46.370 16.109 1.00 2.76 ATOM 484 NH2 ARG 33 -6.901 47.250 15.021 1.00 2.76 ATOM 487 C ARG 33 -5.643 40.881 11.729 1.00 2.76 ATOM 488 O ARG 33 -4.501 41.367 11.631 1.00 2.76 ATOM 489 N PRO 34 -6.098 40.006 10.807 1.00 2.84 ATOM 490 CD PRO 34 -7.352 39.259 10.885 1.00 2.84 ATOM 493 CG PRO 34 -7.296 38.206 9.781 1.00 2.84 ATOM 496 CB PRO 34 -6.401 38.880 8.749 1.00 2.84 ATOM 499 CA PRO 34 -5.348 39.560 9.628 1.00 2.84 ATOM 501 C PRO 34 -4.573 40.641 8.827 1.00 2.84 ATOM 502 O PRO 34 -3.389 40.526 8.479 1.00 2.84 ATOM 503 N PHE 35 -5.235 41.763 8.548 1.00 2.20 ATOM 505 CA PHE 35 -4.603 42.879 7.843 1.00 2.20 ATOM 507 CB PHE 35 -5.683 43.927 7.529 1.00 2.20 ATOM 510 CG PHE 35 -6.969 43.344 6.962 1.00 2.20 ATOM 511 CD1 PHE 35 -8.113 43.224 7.777 1.00 2.20 ATOM 513 CE1 PHE 35 -9.286 42.635 7.268 1.00 2.20 ATOM 515 CZ PHE 35 -9.320 42.167 5.942 1.00 2.20 ATOM 517 CE2 PHE 35 -8.183 42.295 5.123 1.00 2.20 ATOM 519 CD2 PHE 35 -7.009 42.875 5.633 1.00 2.20 ATOM 521 C PHE 35 -3.436 43.506 8.630 1.00 2.20 ATOM 522 O PHE 35 -2.480 44.005 8.033 1.00 2.20 ATOM 523 N TRP 36 -3.475 43.439 9.968 1.00 2.01 ATOM 525 CA TRP 36 -2.368 43.863 10.825 1.00 2.01 ATOM 527 CB TRP 36 -2.837 44.176 12.254 1.00 2.01 ATOM 530 CG TRP 36 -3.508 45.508 12.448 1.00 2.01 ATOM 531 CD1 TRP 36 -4.464 46.055 11.660 1.00 2.01 ATOM 533 NE1 TRP 36 -4.800 47.311 12.130 1.00 2.01 ATOM 535 CE2 TRP 36 -4.076 47.640 13.254 1.00 2.01 ATOM 536 CZ2 TRP 36 -4.050 48.776 14.077 1.00 2.01 ATOM 538 CH2 TRP 36 -3.168 48.806 15.171 1.00 2.01 ATOM 540 CZ3 TRP 36 -2.335 47.702 15.427 1.00 2.01 ATOM 542 CE3 TRP 36 -2.370 46.567 14.593 1.00 2.01 ATOM 544 CD2 TRP 36 -3.243 46.503 13.486 1.00 2.01 ATOM 545 C TRP 36 -1.207 42.870 10.808 1.00 2.01 ATOM 546 O TRP 36 -0.072 43.352 10.768 1.00 2.01 ATOM 547 N ILE 37 -1.433 41.543 10.713 1.00 1.53 ATOM 549 CA ILE 37 -0.273 40.667 10.369 1.00 1.53 ATOM 551 CB ILE 37 -0.492 39.151 10.630 1.00 1.53 ATOM 553 CG2 ILE 37 -1.711 38.573 9.924 1.00 1.53 ATOM 557 CG1 ILE 37 0.714 38.256 10.269 1.00 1.53 ATOM 560 CD1 ILE 37 1.936 38.471 11.161 1.00 1.53 ATOM 564 C ILE 37 0.354 41.016 9.010 1.00 1.53 ATOM 565 O ILE 37 1.575 41.154 8.960 1.00 1.53 ATOM 566 N SER 38 -0.415 41.317 7.945 1.00 1.70 ATOM 568 CA SER 38 0.241 41.787 6.687 1.00 1.70 ATOM 570 CB SER 38 -0.758 41.931 5.540 1.00 1.70 ATOM 573 OG SER 38 -0.039 42.136 4.332 1.00 1.70 ATOM 575 C SER 38 0.994 43.118 6.828 1.00 1.70 ATOM 576 O SER 38 2.010 43.319 6.162 1.00 1.70 ATOM 577 N SER 39 0.497 44.048 7.648 1.00 1.87 ATOM 579 CA SER 39 1.131 45.360 7.852 1.00 1.87 ATOM 581 CB SER 39 0.197 46.280 8.650 1.00 1.87 ATOM 584 OG SER 39 -1.036 46.467 7.982 1.00 1.87 ATOM 586 C SER 39 2.454 45.263 8.608 1.00 1.87 ATOM 587 O SER 39 3.387 45.993 8.268 1.00 1.87 ATOM 588 N PHE 40 2.533 44.358 9.594 1.00 1.90 ATOM 590 CA PHE 40 3.777 43.989 10.278 1.00 1.90 ATOM 592 CB PHE 40 3.445 43.081 11.477 1.00 1.90 ATOM 595 CG PHE 40 3.423 43.823 12.800 1.00 1.90 ATOM 596 CD1 PHE 40 2.384 44.728 13.088 1.00 1.90 ATOM 598 CE1 PHE 40 2.381 45.437 14.304 1.00 1.90 ATOM 600 CZ PHE 40 3.413 45.237 15.236 1.00 1.90 ATOM 602 CE2 PHE 40 4.452 44.334 14.954 1.00 1.90 ATOM 604 CD2 PHE 40 4.458 43.631 13.736 1.00 1.90 ATOM 606 C PHE 40 4.758 43.334 9.299 1.00 1.90 ATOM 607 O PHE 40 5.853 43.833 9.080 1.00 1.90 ATOM 608 N ILE 41 4.337 42.274 8.613 1.00 1.93 ATOM 610 CA ILE 41 5.178 41.512 7.672 1.00 1.93 ATOM 612 CB ILE 41 4.385 40.237 7.298 1.00 1.93 ATOM 614 CG2 ILE 41 4.902 39.533 6.034 1.00 1.93 ATOM 618 CG1 ILE 41 4.303 39.304 8.546 1.00 1.93 ATOM 621 CD1 ILE 41 5.317 38.161 8.645 1.00 1.93 ATOM 625 C ILE 41 5.693 42.333 6.471 1.00 1.93 ATOM 626 O ILE 41 6.695 41.973 5.847 1.00 1.93 ATOM 627 N GLY 42 5.047 43.465 6.188 1.00 2.91 ATOM 629 CA GLY 42 5.418 44.366 5.102 1.00 2.91 ATOM 632 C GLY 42 4.659 43.969 3.828 1.00 2.91 ATOM 633 O GLY 42 4.259 42.821 3.622 1.00 2.91 ATOM 634 N ARG 43 4.419 44.925 2.932 1.00 3.57 ATOM 636 CA ARG 43 3.301 44.865 1.974 1.00 3.57 ATOM 638 CB ARG 43 2.687 46.280 1.850 1.00 3.57 ATOM 641 CG ARG 43 2.030 46.807 3.145 1.00 3.57 ATOM 644 CD ARG 43 2.714 48.035 3.786 1.00 3.57 ATOM 647 NE ARG 43 3.401 47.708 5.053 1.00 3.57 ATOM 649 CZ ARG 43 4.437 48.334 5.586 1.00 3.57 ATOM 650 NH1 ARG 43 4.839 47.991 6.779 1.00 3.57 ATOM 653 NH2 ARG 43 5.100 49.280 4.981 1.00 3.57 ATOM 656 C ARG 43 3.580 44.213 0.606 1.00 3.57 ATOM 657 O ARG 43 3.012 44.610 -0.407 1.00 3.57 ATOM 658 N SER 44 4.404 43.176 0.605 1.00 5.37 ATOM 660 CA SER 44 4.469 42.029 -0.330 1.00 5.37 ATOM 662 CB SER 44 3.587 42.053 -1.581 1.00 5.37 ATOM 665 OG SER 44 3.503 40.762 -2.168 1.00 5.37 ATOM 667 C SER 44 5.927 41.397 -0.343 1.00 5.37 ATOM 668 O SER 44 6.071 40.496 -1.156 1.00 5.37 ATOM 669 N LYS 45 7.028 41.666 0.451 1.00 6.16 ATOM 671 CA LYS 45 7.491 42.511 1.647 1.00 6.16 ATOM 673 CB LYS 45 8.723 41.864 2.318 1.00 6.16 ATOM 676 CG LYS 45 9.932 41.715 1.387 1.00 6.16 ATOM 679 CD LYS 45 11.101 41.055 2.142 1.00 6.16 ATOM 682 CE LYS 45 12.271 40.724 1.212 1.00 6.16 ATOM 685 NZ LYS 45 12.846 41.949 0.618 1.00 6.16 ATOM 689 C LYS 45 7.703 43.995 1.337 1.00 6.16 ATOM 690 O LYS 45 7.980 44.768 2.241 1.00 6.16 TER END