####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS152_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 2 - 26 4.93 9.27 LCS_AVERAGE: 51.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.97 16.92 LCS_AVERAGE: 17.51 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.50 15.98 LCS_AVERAGE: 12.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 6 8 25 4 5 6 6 8 8 8 9 15 18 19 20 25 28 33 35 35 36 37 37 LCS_GDT V 3 V 3 6 8 25 4 5 6 7 8 8 8 9 13 19 20 23 24 28 33 35 35 36 37 37 LCS_GDT Q 4 Q 4 6 8 25 4 5 6 7 8 8 10 13 19 23 25 27 29 32 34 35 35 36 38 38 LCS_GDT G 5 G 5 6 8 25 4 5 6 7 8 9 11 17 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT P 6 P 6 6 8 25 4 5 6 7 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT W 7 W 7 6 8 25 4 5 6 7 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT V 8 V 8 6 8 25 5 6 6 7 8 9 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT G 9 G 9 6 8 25 5 6 6 7 8 9 11 12 15 19 20 23 25 32 34 35 36 37 38 38 LCS_GDT S 10 S 10 6 8 25 5 6 6 7 7 10 12 13 15 19 20 24 29 32 34 35 36 37 38 38 LCS_GDT S 11 S 11 6 8 25 5 6 6 8 9 10 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT Y 12 Y 12 6 8 25 5 6 6 7 9 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT V 13 V 13 6 8 25 5 6 6 7 9 9 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT A 14 A 14 5 6 25 4 4 5 6 9 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT E 15 E 15 5 6 25 4 4 5 6 7 7 12 14 19 20 23 27 29 32 34 35 36 37 38 38 LCS_GDT T 16 T 16 5 6 25 4 4 5 6 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT G 17 G 17 5 6 25 4 4 5 6 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT Q 18 Q 18 5 6 25 3 4 5 6 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT N 19 N 19 4 9 25 3 3 4 5 7 9 11 14 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT W 20 W 20 8 9 25 6 8 8 8 8 10 12 12 17 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT A 21 A 21 8 9 25 6 8 8 8 8 10 12 13 18 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT S 22 S 22 8 9 25 6 8 8 8 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT L 23 L 23 8 9 25 6 8 8 8 8 10 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT A 24 A 24 8 9 25 6 8 8 8 8 10 12 13 16 18 21 27 29 32 34 35 36 37 38 38 LCS_GDT A 25 A 25 8 9 25 6 8 8 8 8 10 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT N 26 N 26 8 9 25 5 8 8 8 8 8 12 12 18 21 25 27 29 32 34 35 36 37 38 38 LCS_GDT E 27 E 27 8 9 24 4 8 8 8 8 10 12 13 14 15 16 21 27 29 33 35 36 37 38 38 LCS_GDT L 28 L 28 3 7 22 3 3 4 7 7 8 10 13 14 15 17 20 24 28 32 34 36 37 38 38 LCS_GDT R 29 R 29 5 7 22 3 4 5 7 7 8 10 13 14 15 17 20 24 27 32 34 36 37 38 38 LCS_GDT V 30 V 30 5 7 22 4 4 5 7 7 8 10 13 14 15 16 19 24 27 32 34 36 37 38 38 LCS_GDT T 31 T 31 5 7 22 4 4 5 7 7 8 12 13 14 16 17 23 28 32 34 35 36 37 38 38 LCS_GDT E 32 E 32 5 7 22 4 4 5 7 7 8 11 13 14 20 23 25 29 32 34 35 36 37 38 38 LCS_GDT R 33 R 33 5 7 22 4 4 5 7 8 11 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT P 34 P 34 4 7 22 3 3 5 7 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT F 35 F 35 4 7 22 3 3 5 6 8 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT W 36 W 36 5 8 22 4 5 6 8 9 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT I 37 I 37 5 8 22 4 5 6 8 9 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 LCS_GDT S 38 S 38 5 8 21 4 5 6 8 9 10 10 11 14 20 23 27 29 32 34 35 36 37 38 38 LCS_GDT S 39 S 39 5 8 20 4 5 6 8 9 10 11 12 17 22 25 27 29 32 34 35 36 37 38 38 LCS_GDT F 40 F 40 5 8 16 4 4 6 8 9 10 11 12 17 22 25 27 29 32 34 35 36 37 38 38 LCS_GDT I 41 I 41 5 8 16 4 4 6 8 9 10 11 12 14 18 23 26 29 32 34 35 36 37 38 38 LCS_GDT G 42 G 42 4 8 16 4 4 4 8 9 10 11 12 13 14 17 19 21 23 24 26 28 33 35 37 LCS_GDT R 43 R 43 4 8 16 4 4 5 8 9 10 11 12 13 14 17 19 21 22 24 26 27 28 31 37 LCS_GDT S 44 S 44 3 6 16 1 3 4 5 5 9 11 12 13 14 15 15 16 18 18 19 24 25 26 26 LCS_GDT K 45 K 45 3 6 16 0 3 4 4 5 8 11 12 13 14 15 15 16 18 18 19 19 19 21 22 LCS_AVERAGE LCS_A: 27.38 ( 12.65 17.51 51.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 9 12 14 18 20 23 25 27 29 32 34 35 36 37 38 38 GDT PERCENT_AT 13.64 18.18 18.18 18.18 20.45 27.27 31.82 40.91 45.45 52.27 56.82 61.36 65.91 72.73 77.27 79.55 81.82 84.09 86.36 86.36 GDT RMS_LOCAL 0.14 0.50 0.50 0.50 1.57 2.38 2.61 2.98 3.23 3.61 3.87 4.08 4.34 4.79 5.09 5.18 5.64 5.82 5.89 5.89 GDT RMS_ALL_AT 15.13 15.98 15.98 15.98 16.00 8.86 8.80 8.81 8.81 8.94 8.74 8.78 8.57 8.38 8.31 8.47 8.38 8.45 8.37 8.37 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.202 0 0.622 0.607 9.202 0.000 0.000 - LGA V 3 V 3 8.772 0 0.553 1.341 12.681 0.000 0.000 12.133 LGA Q 4 Q 4 5.752 0 0.112 0.496 7.189 0.000 3.838 2.921 LGA G 5 G 5 4.844 0 0.101 0.101 5.810 0.455 0.455 - LGA P 6 P 6 3.723 0 0.050 0.405 4.929 20.455 14.286 4.416 LGA W 7 W 7 2.514 0 0.373 1.168 5.342 16.364 16.494 3.790 LGA V 8 V 8 3.940 0 0.642 1.368 5.068 7.727 8.571 5.068 LGA G 9 G 9 7.396 0 0.232 0.232 7.396 0.000 0.000 - LGA S 10 S 10 7.332 0 0.066 0.690 9.766 0.000 0.000 9.766 LGA S 11 S 11 3.790 0 0.055 0.050 4.545 14.545 13.636 4.432 LGA Y 12 Y 12 1.899 0 0.062 0.927 4.786 54.545 22.273 4.676 LGA V 13 V 13 3.200 0 0.577 0.665 7.446 47.273 27.013 6.668 LGA A 14 A 14 2.309 0 0.056 0.059 4.621 29.091 26.909 - LGA E 15 E 15 5.439 0 0.047 1.182 8.396 1.818 0.808 8.396 LGA T 16 T 16 2.271 0 0.153 0.261 3.667 36.364 35.065 2.040 LGA G 17 G 17 2.834 0 0.648 0.648 4.414 25.455 25.455 - LGA Q 18 Q 18 3.026 0 0.618 1.322 10.688 16.364 7.879 8.224 LGA N 19 N 19 5.388 0 0.051 1.106 7.748 4.545 2.273 7.026 LGA W 20 W 20 6.866 0 0.619 1.110 11.291 0.000 0.000 11.291 LGA A 21 A 21 6.119 0 0.030 0.029 6.850 2.727 2.182 - LGA S 22 S 22 2.054 0 0.045 0.640 3.700 37.727 36.061 2.991 LGA L 23 L 23 3.770 0 0.012 0.852 6.020 9.545 11.591 5.607 LGA A 24 A 24 6.756 0 0.023 0.028 7.587 0.000 0.000 - LGA A 25 A 25 3.693 0 0.031 0.031 4.960 5.000 14.182 - LGA N 26 N 26 6.103 0 0.067 1.178 8.744 0.455 2.955 4.218 LGA E 27 E 27 10.339 0 0.440 1.002 16.642 0.000 0.000 15.139 LGA L 28 L 28 12.496 0 0.200 0.453 16.906 0.000 0.000 16.906 LGA R 29 R 29 13.706 0 0.421 1.413 23.390 0.000 0.000 23.390 LGA V 30 V 30 13.027 0 0.199 0.996 15.121 0.000 0.000 12.046 LGA T 31 T 31 10.731 0 0.081 0.148 15.402 0.000 0.000 15.402 LGA E 32 E 32 9.870 0 0.052 1.104 17.660 0.000 0.000 17.660 LGA R 33 R 33 3.513 0 0.106 1.407 8.931 3.182 7.273 8.931 LGA P 34 P 34 3.391 0 0.069 0.079 7.721 12.273 7.013 7.721 LGA F 35 F 35 2.324 0 0.638 1.213 9.556 62.727 22.975 9.556 LGA W 36 W 36 0.752 0 0.621 1.131 8.251 74.091 32.987 7.805 LGA I 37 I 37 2.605 0 0.077 1.219 7.479 19.091 9.545 7.479 LGA S 38 S 38 7.783 0 0.117 0.621 10.754 0.000 0.000 10.754 LGA S 39 S 39 8.558 0 0.140 0.244 10.680 0.000 0.000 6.859 LGA F 40 F 40 6.497 0 0.063 0.880 9.752 0.000 0.165 9.752 LGA I 41 I 41 8.636 0 0.621 1.407 12.650 0.000 0.000 10.207 LGA G 42 G 42 15.597 0 0.189 0.189 18.445 0.000 0.000 - LGA R 43 R 43 16.655 0 0.623 1.201 18.359 0.000 0.000 15.950 LGA S 44 S 44 22.002 0 0.690 0.754 25.233 0.000 0.000 22.836 LGA K 45 K 45 24.716 0 0.038 0.744 26.603 0.000 0.000 23.012 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.016 7.995 9.098 11.405 7.997 3.481 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.98 39.205 33.534 0.584 LGA_LOCAL RMSD: 2.984 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.806 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.016 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.152810 * X + -0.617002 * Y + 0.771983 * Z + -6.381609 Y_new = 0.608700 * X + 0.556631 * Y + 0.565373 * Z + 55.504078 Z_new = -0.778546 * X + 0.556300 * Y + 0.290510 * Z + -20.486704 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.816757 0.892345 1.089532 [DEG: 104.0925 51.1276 62.4256 ] ZXZ: 2.202915 1.276036 -0.950380 [DEG: 126.2177 73.1115 -54.4528 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS152_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.98 33.534 8.02 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS152_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 17.800 38.112 7.725 1.00 15.00 N ATOM 14 CA ALA 2 17.054 37.094 6.964 1.00 15.00 C ATOM 15 CB ALA 2 16.219 36.235 7.912 1.00 15.00 C ATOM 16 C ALA 2 16.155 37.735 5.900 1.00 15.00 C ATOM 17 O ALA 2 16.052 37.212 4.785 1.00 15.00 O ATOM 18 N VAL 3 15.539 38.879 6.256 1.00 15.00 N ATOM 20 CA VAL 3 14.611 39.710 5.434 1.00 15.00 C ATOM 21 CB VAL 3 15.387 40.909 4.680 1.00 15.00 C ATOM 22 CG1 VAL 3 16.321 40.394 3.570 1.00 15.00 C ATOM 23 CG2 VAL 3 14.418 41.988 4.166 1.00 15.00 C ATOM 24 C VAL 3 13.563 38.973 4.543 1.00 15.00 C ATOM 25 O VAL 3 12.358 39.093 4.789 1.00 15.00 O ATOM 26 N GLN 4 14.042 38.217 3.536 1.00 15.00 N ATOM 28 CA GLN 4 13.242 37.425 2.559 1.00 15.00 C ATOM 29 CB GLN 4 12.595 36.183 3.209 1.00 15.00 C ATOM 30 CG GLN 4 13.583 35.111 3.659 1.00 15.00 C ATOM 31 CD GLN 4 12.898 33.914 4.288 1.00 15.00 C ATOM 32 OE1 GLN 4 12.694 33.869 5.501 1.00 15.00 O ATOM 33 NE2 GLN 4 12.538 32.935 3.465 1.00 15.00 N ATOM 36 C GLN 4 12.194 38.191 1.732 1.00 15.00 C ATOM 37 O GLN 4 11.473 39.042 2.266 1.00 15.00 O ATOM 38 N GLY 5 12.133 37.877 0.435 1.00 14.55 N ATOM 40 CA GLY 5 11.191 38.518 -0.475 1.00 14.55 C ATOM 41 C GLY 5 11.385 38.065 -1.920 1.00 14.55 C ATOM 42 O GLY 5 12.545 37.865 -2.299 1.00 14.55 O ATOM 43 N PRO 6 10.314 37.873 -2.755 1.00 10.90 N ATOM 44 CD PRO 6 10.623 37.649 -4.183 1.00 10.90 C ATOM 45 CA PRO 6 8.846 38.006 -2.594 1.00 10.90 C ATOM 46 CB PRO 6 8.326 37.788 -4.018 1.00 10.90 C ATOM 47 CG PRO 6 9.435 38.276 -4.872 1.00 10.90 C ATOM 48 C PRO 6 8.197 37.002 -1.616 1.00 10.90 C ATOM 49 O PRO 6 7.084 37.239 -1.128 1.00 10.90 O ATOM 50 N TRP 7 8.914 35.904 -1.334 1.00 12.62 N ATOM 52 CA TRP 7 8.464 34.831 -0.427 1.00 12.62 C ATOM 53 CB TRP 7 8.759 33.444 -1.042 1.00 12.62 C ATOM 54 CG TRP 7 8.034 33.119 -2.372 1.00 12.62 C ATOM 55 CD2 TRP 7 8.474 33.427 -3.715 1.00 12.62 C ATOM 56 CE2 TRP 7 7.499 32.896 -4.606 1.00 12.62 C ATOM 57 CE3 TRP 7 9.595 34.101 -4.253 1.00 12.62 C ATOM 58 CD1 TRP 7 6.847 32.435 -2.514 1.00 12.62 C ATOM 59 NE1 TRP 7 6.528 32.302 -3.844 1.00 12.62 N ATOM 61 CZ2 TRP 7 7.606 33.015 -6.013 1.00 12.62 C ATOM 62 CZ3 TRP 7 9.705 34.221 -5.662 1.00 12.62 C ATOM 63 CH2 TRP 7 8.710 33.676 -6.520 1.00 12.62 C ATOM 64 C TRP 7 9.110 34.932 0.965 1.00 12.62 C ATOM 65 O TRP 7 10.287 35.298 1.080 1.00 12.62 O ATOM 66 N VAL 8 8.322 34.618 2.005 1.00 11.02 N ATOM 68 CA VAL 8 8.753 34.653 3.419 1.00 11.02 C ATOM 69 CB VAL 8 7.823 35.573 4.311 1.00 11.02 C ATOM 70 CG1 VAL 8 8.144 37.037 4.053 1.00 11.02 C ATOM 71 CG2 VAL 8 6.322 35.314 4.041 1.00 11.02 C ATOM 72 C VAL 8 8.888 33.246 4.038 1.00 11.02 C ATOM 73 O VAL 8 8.092 32.351 3.729 1.00 11.02 O ATOM 74 N GLY 9 9.909 33.070 4.884 1.00 9.50 N ATOM 76 CA GLY 9 10.157 31.791 5.538 1.00 9.50 C ATOM 77 C GLY 9 10.192 31.891 7.054 1.00 9.50 C ATOM 78 O GLY 9 10.073 30.868 7.740 1.00 9.50 O ATOM 79 N SER 10 10.352 33.118 7.565 1.00 11.94 N ATOM 81 CA SER 10 10.410 33.409 9.007 1.00 11.94 C ATOM 82 CB SER 10 11.611 34.318 9.318 1.00 11.94 C ATOM 83 OG SER 10 11.815 34.460 10.716 1.00 11.94 O ATOM 85 C SER 10 9.107 34.065 9.497 1.00 11.94 C ATOM 86 O SER 10 8.644 33.767 10.605 1.00 11.94 O ATOM 87 N SER 11 8.534 34.949 8.665 1.00 9.77 N ATOM 89 CA SER 11 7.280 35.685 8.943 1.00 9.77 C ATOM 90 OG SER 11 6.039 37.693 8.292 1.00 9.77 O ATOM 92 C SER 11 6.024 34.788 8.952 1.00 9.77 C ATOM 93 O SER 11 5.113 35.008 9.759 1.00 9.77 O ATOM 94 CB SER 11 7.107 36.829 7.934 1.00 9.77 C ATOM 95 N TYR 12 6.000 33.792 8.054 1.00 9.58 N ATOM 97 CA TYR 12 4.893 32.825 7.889 1.00 9.58 C ATOM 98 CB TYR 12 5.083 32.030 6.566 1.00 9.58 C ATOM 99 CG TYR 12 3.855 31.313 5.978 1.00 9.58 C ATOM 100 CD1 TYR 12 3.563 29.968 6.314 1.00 9.58 C ATOM 101 CE1 TYR 12 2.448 29.289 5.745 1.00 9.58 C ATOM 102 CD2 TYR 12 2.998 31.965 5.055 1.00 9.58 C ATOM 103 CE2 TYR 12 1.882 31.293 4.483 1.00 9.58 C ATOM 104 CZ TYR 12 1.617 29.960 4.834 1.00 9.58 C ATOM 105 OH TYR 12 0.538 29.310 4.280 1.00 9.58 O ATOM 107 C TYR 12 4.740 31.857 9.084 1.00 9.58 C ATOM 108 O TYR 12 3.616 31.600 9.529 1.00 9.58 O ATOM 109 N VAL 13 5.880 31.355 9.601 1.00 10.46 N ATOM 111 CA VAL 13 6.010 30.399 10.744 1.00 10.46 C ATOM 112 CB VAL 13 5.681 31.056 12.169 1.00 10.46 C ATOM 113 CG1 VAL 13 6.255 30.208 13.321 1.00 10.46 C ATOM 114 CG2 VAL 13 6.244 32.475 12.260 1.00 10.46 C ATOM 115 C VAL 13 5.227 29.069 10.552 1.00 10.46 C ATOM 116 O VAL 13 4.097 29.073 10.048 1.00 10.46 O ATOM 117 N ALA 14 5.850 27.954 10.959 1.00 7.82 N ATOM 119 CA ALA 14 5.271 26.604 10.851 1.00 7.82 C ATOM 120 CB ALA 14 6.240 25.672 10.128 1.00 7.82 C ATOM 121 C ALA 14 4.896 26.017 12.219 1.00 7.82 C ATOM 122 O ALA 14 3.929 25.252 12.318 1.00 7.82 O ATOM 123 N GLU 15 5.665 26.379 13.257 1.00 7.46 N ATOM 125 CA GLU 15 5.466 25.915 14.649 1.00 7.46 C ATOM 126 CB GLU 15 6.702 26.231 15.506 1.00 7.46 C ATOM 127 CG GLU 15 7.948 25.420 15.156 1.00 7.46 C ATOM 128 CD GLU 15 9.139 25.768 16.030 1.00 7.46 C ATOM 129 OE1 GLU 15 9.909 26.677 15.655 1.00 7.46 O ATOM 130 OE2 GLU 15 9.306 25.129 17.090 1.00 7.46 O ATOM 131 C GLU 15 4.198 26.449 15.346 1.00 7.46 C ATOM 132 O GLU 15 3.472 25.672 15.978 1.00 7.46 O ATOM 133 N THR 16 3.948 27.762 15.222 1.00 7.13 N ATOM 135 CA THR 16 2.780 28.451 15.818 1.00 7.13 C ATOM 136 CB THR 16 2.969 30.000 15.838 1.00 7.13 C ATOM 137 OG1 THR 16 3.318 30.462 14.527 1.00 7.13 O ATOM 139 CG2 THR 16 4.057 30.403 16.829 1.00 7.13 C ATOM 140 C THR 16 1.419 28.104 15.184 1.00 7.13 C ATOM 141 O THR 16 0.449 27.837 15.904 1.00 7.13 O ATOM 142 N GLY 17 1.368 28.095 13.845 1.00 8.02 N ATOM 144 CA GLY 17 0.148 27.789 13.104 1.00 8.02 C ATOM 145 C GLY 17 -0.648 29.023 12.703 1.00 8.02 C ATOM 146 O GLY 17 -0.617 30.030 13.420 1.00 8.02 O ATOM 147 N GLN 18 -1.354 28.937 11.568 1.00 8.14 N ATOM 149 CA GLN 18 -2.187 30.026 11.016 1.00 8.14 C ATOM 150 CB GLN 18 -2.585 29.721 9.564 1.00 8.14 C ATOM 151 CG GLN 18 -1.434 29.766 8.563 1.00 8.14 C ATOM 152 CD GLN 18 -1.881 29.457 7.147 1.00 8.14 C ATOM 153 OE1 GLN 18 -1.871 28.303 6.718 1.00 8.14 O ATOM 154 NE2 GLN 18 -2.277 30.490 6.412 1.00 8.14 N ATOM 157 C GLN 18 -3.445 30.347 11.849 1.00 8.14 C ATOM 158 O GLN 18 -3.723 31.523 12.122 1.00 8.14 O ATOM 159 N ASN 19 -4.169 29.296 12.266 1.00 7.92 N ATOM 161 CA ASN 19 -5.402 29.397 13.077 1.00 7.92 C ATOM 162 CB ASN 19 -6.125 28.040 13.137 1.00 7.92 C ATOM 163 CG ASN 19 -6.651 27.587 11.779 1.00 7.92 C ATOM 164 OD1 ASN 19 -7.788 27.885 11.409 1.00 7.92 O ATOM 165 ND2 ASN 19 -5.828 26.849 11.038 1.00 7.92 N ATOM 168 C ASN 19 -5.125 29.908 14.501 1.00 7.92 C ATOM 169 O ASN 19 -5.871 30.753 15.013 1.00 7.92 O ATOM 170 N TRP 20 -4.028 29.419 15.102 1.00 8.65 N ATOM 172 CA TRP 20 -3.576 29.788 16.459 1.00 8.65 C ATOM 173 CB TRP 20 -2.462 28.833 16.938 1.00 8.65 C ATOM 174 CG TRP 20 -2.880 27.360 17.161 1.00 8.65 C ATOM 175 CD2 TRP 20 -2.957 26.303 16.174 1.00 8.65 C ATOM 176 CE2 TRP 20 -3.348 25.118 16.861 1.00 8.65 C ATOM 177 CE3 TRP 20 -2.733 26.241 14.779 1.00 8.65 C ATOM 178 CD1 TRP 20 -3.221 26.775 18.360 1.00 8.65 C ATOM 179 NE1 TRP 20 -3.499 25.442 18.183 1.00 8.65 N ATOM 181 CZ2 TRP 20 -3.524 23.878 16.201 1.00 8.65 C ATOM 182 CZ3 TRP 20 -2.907 24.999 14.116 1.00 8.65 C ATOM 183 CH2 TRP 20 -3.300 23.837 14.836 1.00 8.65 C ATOM 184 C TRP 20 -3.095 31.248 16.532 1.00 8.65 C ATOM 185 O TRP 20 -3.413 31.959 17.494 1.00 8.65 O ATOM 186 N ALA 21 -2.361 31.678 15.494 1.00 7.28 N ATOM 188 CA ALA 21 -1.817 33.043 15.354 1.00 7.28 C ATOM 189 CB ALA 21 -0.809 33.095 14.212 1.00 7.28 C ATOM 190 C ALA 21 -2.932 34.077 15.123 1.00 7.28 C ATOM 191 O ALA 21 -2.860 35.194 15.649 1.00 7.28 O ATOM 192 N SER 22 -3.954 33.676 14.351 1.00 7.21 N ATOM 194 CA SER 22 -5.126 34.511 14.018 1.00 7.21 C ATOM 195 CB SER 22 -5.944 33.862 12.896 1.00 7.21 C ATOM 196 OG SER 22 -5.182 33.752 11.707 1.00 7.21 O ATOM 198 C SER 22 -6.019 34.785 15.241 1.00 7.21 C ATOM 199 O SER 22 -6.375 35.944 15.492 1.00 7.21 O ATOM 200 N LEU 23 -6.320 33.732 16.022 1.00 7.25 N ATOM 202 CA LEU 23 -7.147 33.834 17.241 1.00 7.25 C ATOM 203 CB LEU 23 -7.634 32.447 17.736 1.00 7.25 C ATOM 204 CG LEU 23 -6.808 31.207 18.149 1.00 7.25 C ATOM 205 CD1 LEU 23 -6.387 31.249 19.626 1.00 7.25 C ATOM 206 CD2 LEU 23 -7.648 29.966 17.899 1.00 7.25 C ATOM 207 C LEU 23 -6.419 34.621 18.347 1.00 7.25 C ATOM 208 O LEU 23 -7.049 35.374 19.096 1.00 7.25 O ATOM 209 N ALA 24 -5.095 34.421 18.424 1.00 7.95 N ATOM 211 CA ALA 24 -4.193 35.093 19.378 1.00 7.95 C ATOM 212 CB ALA 24 -2.818 34.434 19.360 1.00 7.95 C ATOM 213 C ALA 24 -4.068 36.590 19.043 1.00 7.95 C ATOM 214 O ALA 24 -3.961 37.424 19.949 1.00 7.95 O ATOM 215 N ALA 25 -4.086 36.900 17.736 1.00 9.33 N ATOM 217 CA ALA 25 -3.976 38.270 17.195 1.00 9.33 C ATOM 218 CB ALA 25 -3.734 38.215 15.683 1.00 9.33 C ATOM 219 C ALA 25 -5.183 39.176 17.495 1.00 9.33 C ATOM 220 O ALA 25 -4.993 40.305 17.960 1.00 9.33 O ATOM 221 N ASN 26 -6.405 38.684 17.231 1.00 9.74 N ATOM 223 CA ASN 26 -7.648 39.442 17.486 1.00 9.74 C ATOM 224 CB ASN 26 -8.831 38.883 16.663 1.00 9.74 C ATOM 225 CG ASN 26 -9.115 37.402 16.935 1.00 9.74 C ATOM 226 OD1 ASN 26 -9.628 37.036 17.995 1.00 9.74 O ATOM 227 ND2 ASN 26 -8.804 36.557 15.963 1.00 9.74 N ATOM 230 C ASN 26 -8.049 39.596 18.969 1.00 9.74 C ATOM 231 O ASN 26 -8.294 40.715 19.428 1.00 9.74 O ATOM 232 N GLU 27 -8.071 38.465 19.695 1.00 10.18 N ATOM 234 CA GLU 27 -8.424 38.345 21.131 1.00 10.18 C ATOM 235 CG GLU 27 -10.191 40.092 21.867 1.00 10.18 C ATOM 236 CD GLU 27 -11.665 40.355 22.110 1.00 10.18 C ATOM 237 OE1 GLU 27 -12.358 40.784 21.163 1.00 10.18 O ATOM 238 OE2 GLU 27 -12.131 40.135 23.248 1.00 10.18 O ATOM 239 C GLU 27 -8.078 36.916 21.609 1.00 10.18 C ATOM 240 O GLU 27 -6.892 36.570 21.666 1.00 10.18 O ATOM 241 CB GLU 27 -9.917 38.669 21.393 1.00 10.18 C ATOM 242 N LEU 28 -9.097 36.103 21.947 1.00 10.46 N ATOM 244 CA LEU 28 -8.941 34.710 22.422 1.00 10.46 C ATOM 245 CB LEU 28 -8.997 34.632 23.967 1.00 10.46 C ATOM 246 CG LEU 28 -7.861 35.156 24.867 1.00 10.46 C ATOM 247 CD1 LEU 28 -8.464 35.905 26.045 1.00 10.46 C ATOM 248 CD2 LEU 28 -6.947 34.023 25.361 1.00 10.46 C ATOM 249 C LEU 28 -10.020 33.777 21.845 1.00 10.46 C ATOM 250 O LEU 28 -9.747 32.593 21.606 1.00 10.46 O ATOM 251 N ARG 29 -11.224 34.319 21.611 1.00 11.28 N ATOM 253 CA ARG 29 -12.387 33.568 21.090 1.00 11.28 C ATOM 254 CB ARG 29 -13.697 34.050 21.757 1.00 11.28 C ATOM 255 CG ARG 29 -13.945 35.574 21.790 1.00 11.28 C ATOM 256 CD ARG 29 -15.264 35.904 22.471 1.00 11.28 C ATOM 257 NE ARG 29 -15.518 37.346 22.512 1.00 11.28 N ATOM 259 CZ ARG 29 -16.596 37.921 23.046 1.00 11.28 C ATOM 260 NH1 ARG 29 -16.713 39.241 23.021 1.00 11.28 N ATOM 263 NH2 ARG 29 -17.559 37.194 23.605 1.00 11.28 N ATOM 266 C ARG 29 -12.559 33.448 19.555 1.00 11.28 C ATOM 267 O ARG 29 -12.686 32.330 19.041 1.00 11.28 O ATOM 268 N VAL 30 -12.559 34.589 18.849 1.00 8.96 N ATOM 270 CA VAL 30 -12.723 34.659 17.380 1.00 8.96 C ATOM 271 CB VAL 30 -13.514 35.988 16.965 1.00 8.96 C ATOM 272 CG1 VAL 30 -12.714 37.269 17.276 1.00 8.96 C ATOM 273 CG2 VAL 30 -13.985 35.942 15.502 1.00 8.96 C ATOM 274 C VAL 30 -11.362 34.473 16.645 1.00 8.96 C ATOM 275 O VAL 30 -10.311 34.597 17.277 1.00 8.96 O ATOM 276 N THR 31 -11.410 34.129 15.347 1.00 9.18 N ATOM 278 CA THR 31 -10.216 33.908 14.503 1.00 9.18 C ATOM 279 CB THR 31 -10.287 32.549 13.743 1.00 9.18 C ATOM 280 OG1 THR 31 -11.551 32.431 13.077 1.00 9.18 O ATOM 282 CG2 THR 31 -10.105 31.380 14.706 1.00 9.18 C ATOM 283 C THR 31 -9.965 35.044 13.490 1.00 9.18 C ATOM 284 O THR 31 -8.811 35.306 13.124 1.00 9.18 O ATOM 285 N GLU 32 -11.040 35.742 13.091 1.00 10.29 N ATOM 287 CA GLU 32 -10.996 36.859 12.119 1.00 10.29 C ATOM 288 CB GLU 32 -12.407 37.181 11.605 1.00 10.29 C ATOM 289 CG GLU 32 -13.023 36.106 10.712 1.00 10.29 C ATOM 290 CD GLU 32 -14.416 36.472 10.230 1.00 10.29 C ATOM 291 OE1 GLU 32 -15.396 36.128 10.925 1.00 10.29 O ATOM 292 OE2 GLU 32 -14.530 37.100 9.157 1.00 10.29 O ATOM 293 C GLU 32 -10.347 38.136 12.680 1.00 10.29 C ATOM 294 O GLU 32 -10.419 38.380 13.891 1.00 10.29 O ATOM 295 N ARG 33 -9.710 38.927 11.796 1.00 9.08 N ATOM 297 CA ARG 33 -8.998 40.206 12.091 1.00 9.08 C ATOM 298 CB ARG 33 -9.948 41.276 12.681 1.00 9.08 C ATOM 299 CG ARG 33 -11.015 41.788 11.712 1.00 9.08 C ATOM 300 CD ARG 33 -11.923 42.839 12.350 1.00 9.08 C ATOM 301 NE ARG 33 -12.809 42.280 13.376 1.00 9.08 N ATOM 303 CZ ARG 33 -13.701 42.976 14.082 1.00 9.08 C ATOM 304 NH1 ARG 33 -13.857 44.283 13.898 1.00 9.08 N ATOM 307 NH2 ARG 33 -14.447 42.354 14.986 1.00 9.08 N ATOM 310 C ARG 33 -7.732 40.053 12.986 1.00 9.08 C ATOM 311 O ARG 33 -7.671 39.095 13.763 1.00 9.08 O ATOM 312 N PRO 34 -6.682 40.934 12.850 1.00 8.77 N ATOM 313 CD PRO 34 -5.686 40.841 13.941 1.00 8.77 C ATOM 314 CA PRO 34 -6.353 42.115 12.014 1.00 8.77 C ATOM 315 CB PRO 34 -5.076 42.654 12.665 1.00 8.77 C ATOM 316 CG PRO 34 -5.228 42.273 14.084 1.00 8.77 C ATOM 317 C PRO 34 -6.124 41.825 10.516 1.00 8.77 C ATOM 318 O PRO 34 -5.691 40.725 10.151 1.00 8.77 O ATOM 319 N PHE 35 -6.430 42.826 9.679 1.00 9.15 N ATOM 321 CA PHE 35 -6.299 42.783 8.209 1.00 9.15 C ATOM 322 CB PHE 35 -7.061 43.982 7.585 1.00 9.15 C ATOM 323 CG PHE 35 -7.601 43.742 6.169 1.00 9.15 C ATOM 324 CD1 PHE 35 -8.905 43.228 5.969 1.00 9.15 C ATOM 325 CD2 PHE 35 -6.822 44.065 5.032 1.00 9.15 C ATOM 326 CE1 PHE 35 -9.427 43.038 4.659 1.00 9.15 C ATOM 327 CE2 PHE 35 -7.331 43.881 3.716 1.00 9.15 C ATOM 328 CZ PHE 35 -8.637 43.366 3.530 1.00 9.15 C ATOM 329 C PHE 35 -4.840 42.751 7.699 1.00 9.15 C ATOM 330 O PHE 35 -4.551 42.078 6.703 1.00 9.15 O ATOM 331 N TRP 36 -3.947 43.476 8.391 1.00 8.17 N ATOM 333 CA TRP 36 -2.512 43.584 8.048 1.00 8.17 C ATOM 334 CB TRP 36 -1.840 44.693 8.889 1.00 8.17 C ATOM 335 CG TRP 36 -2.373 46.131 8.674 1.00 8.17 C ATOM 336 CD2 TRP 36 -3.484 46.769 9.345 1.00 8.17 C ATOM 337 CE2 TRP 36 -3.566 48.099 8.843 1.00 8.17 C ATOM 338 CE3 TRP 36 -4.418 46.349 10.320 1.00 8.17 C ATOM 339 CD1 TRP 36 -1.853 47.081 7.823 1.00 8.17 C ATOM 340 NE1 TRP 36 -2.563 48.253 7.923 1.00 8.17 N ATOM 342 CZ2 TRP 36 -4.548 49.021 9.282 1.00 8.17 C ATOM 343 CZ3 TRP 36 -5.402 47.270 10.760 1.00 8.17 C ATOM 344 CH2 TRP 36 -5.453 48.592 10.235 1.00 8.17 C ATOM 345 C TRP 36 -1.708 42.274 8.172 1.00 8.17 C ATOM 346 O TRP 36 -0.945 41.935 7.258 1.00 8.17 O ATOM 347 N ILE 37 -1.901 41.547 9.284 1.00 8.31 N ATOM 349 CA ILE 37 -1.225 40.258 9.565 1.00 8.31 C ATOM 350 CB ILE 37 -1.394 39.812 11.077 1.00 8.31 C ATOM 351 CG2 ILE 37 -0.446 38.618 11.404 1.00 8.31 C ATOM 352 CG1 ILE 37 -1.055 40.983 12.020 1.00 8.31 C ATOM 353 CD1 ILE 37 -1.809 40.994 13.360 1.00 8.31 C ATOM 354 C ILE 37 -1.752 39.168 8.598 1.00 8.31 C ATOM 355 O ILE 37 -0.971 38.335 8.117 1.00 8.31 O ATOM 356 N SER 38 -3.060 39.223 8.299 1.00 6.35 N ATOM 358 CA SER 38 -3.756 38.285 7.393 1.00 6.35 C ATOM 359 CB SER 38 -5.278 38.468 7.505 1.00 6.35 C ATOM 360 OG SER 38 -5.985 37.458 6.801 1.00 6.35 O ATOM 362 C SER 38 -3.297 38.460 5.930 1.00 6.35 C ATOM 363 O SER 38 -3.075 37.465 5.228 1.00 6.35 O ATOM 364 N SER 39 -3.169 39.722 5.495 1.00 6.25 N ATOM 366 CA SER 39 -2.723 40.106 4.140 1.00 6.25 C ATOM 367 CB SER 39 -3.020 41.589 3.879 1.00 6.25 C ATOM 368 OG SER 39 -2.461 42.416 4.887 1.00 6.25 O ATOM 370 C SER 39 -1.232 39.808 3.886 1.00 6.25 C ATOM 371 O SER 39 -0.861 39.394 2.782 1.00 6.25 O ATOM 372 N PHE 40 -0.402 40.031 4.917 1.00 5.53 N ATOM 374 CA PHE 40 1.060 39.811 4.893 1.00 5.53 C ATOM 375 CB PHE 40 1.718 40.483 6.131 1.00 5.53 C ATOM 376 CG PHE 40 3.186 40.889 5.947 1.00 5.53 C ATOM 377 CD1 PHE 40 4.232 40.004 6.300 1.00 5.53 C ATOM 378 CD2 PHE 40 3.526 42.173 5.457 1.00 5.53 C ATOM 379 CE1 PHE 40 5.596 40.386 6.170 1.00 5.53 C ATOM 380 CE2 PHE 40 4.886 42.571 5.321 1.00 5.53 C ATOM 381 CZ PHE 40 5.923 41.674 5.679 1.00 5.53 C ATOM 382 C PHE 40 1.447 38.315 4.819 1.00 5.53 C ATOM 383 O PHE 40 2.369 37.955 4.080 1.00 5.53 O ATOM 384 N ILE 41 0.740 37.473 5.589 1.00 6.00 N ATOM 386 CA ILE 41 0.964 36.012 5.655 1.00 6.00 C ATOM 387 CB ILE 41 0.292 35.389 6.964 1.00 6.00 C ATOM 388 CG2 ILE 41 -1.261 35.429 6.879 1.00 6.00 C ATOM 389 CG1 ILE 41 0.852 33.983 7.269 1.00 6.00 C ATOM 390 CD1 ILE 41 0.997 33.646 8.758 1.00 6.00 C ATOM 391 C ILE 41 0.573 35.264 4.349 1.00 6.00 C ATOM 392 O ILE 41 1.259 34.319 3.947 1.00 6.00 O ATOM 393 N GLY 42 -0.510 35.718 3.709 1.00 6.80 N ATOM 395 CA GLY 42 -1.005 35.110 2.478 1.00 6.80 C ATOM 396 C GLY 42 -0.461 35.694 1.181 1.00 6.80 C ATOM 397 O GLY 42 -0.146 34.937 0.255 1.00 6.80 O ATOM 398 N ARG 43 -0.338 37.032 1.135 1.00 6.16 N ATOM 400 CA ARG 43 0.161 37.848 -0.009 1.00 6.16 C ATOM 401 CB ARG 43 1.669 38.207 0.153 1.00 6.16 C ATOM 402 CG ARG 43 2.673 37.041 0.322 1.00 6.16 C ATOM 403 CD ARG 43 4.116 37.532 0.432 1.00 6.16 C ATOM 404 NE ARG 43 4.381 38.251 1.682 1.00 6.16 N ATOM 406 CZ ARG 43 5.549 38.799 2.020 1.00 6.16 C ATOM 407 NH1 ARG 43 6.602 38.730 1.211 1.00 6.16 N ATOM 410 NH2 ARG 43 5.664 39.426 3.183 1.00 6.16 N ATOM 413 C ARG 43 -0.191 37.411 -1.465 1.00 6.16 C ATOM 414 O ARG 43 0.487 37.803 -2.426 1.00 6.16 O ATOM 415 N SER 44 -1.278 36.636 -1.595 1.00 5.99 N ATOM 417 CA SER 44 -1.777 36.112 -2.879 1.00 5.99 C ATOM 418 CB SER 44 -2.179 34.638 -2.724 1.00 5.99 C ATOM 419 OG SER 44 -3.106 34.457 -1.665 1.00 5.99 O ATOM 421 C SER 44 -2.956 36.936 -3.436 1.00 5.99 C ATOM 422 O SER 44 -3.262 36.854 -4.634 1.00 5.99 O ATOM 423 N LYS 45 -3.576 37.743 -2.564 1.00 6.24 N ATOM 425 CA LYS 45 -4.726 38.606 -2.904 1.00 6.24 C ATOM 426 CG LYS 45 -6.481 37.326 -1.515 1.00 6.24 C ATOM 427 CD LYS 45 -7.459 37.444 -0.357 1.00 6.24 C ATOM 428 CE LYS 45 -8.200 36.138 -0.124 1.00 6.24 C ATOM 429 NZ LYS 45 -9.162 36.240 1.008 1.00 6.24 N ATOM 433 C LYS 45 -4.305 40.040 -3.264 1.00 6.24 C ATOM 434 O LYS 45 -3.305 40.541 -2.736 1.00 6.24 O ATOM 435 CB LYS 45 -5.737 38.637 -1.749 1.00 6.24 C TER END