####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS156_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 14 - 30 4.96 15.58 LONGEST_CONTINUOUS_SEGMENT: 17 24 - 40 4.81 14.59 LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 4.58 15.40 LONGEST_CONTINUOUS_SEGMENT: 17 26 - 42 4.56 16.28 LONGEST_CONTINUOUS_SEGMENT: 17 27 - 43 4.94 17.08 LCS_AVERAGE: 34.87 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.85 14.07 LCS_AVERAGE: 15.39 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 31 - 35 1.00 13.69 LCS_AVERAGE: 8.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 4 5 6 7 7 11 12 13 14 15 15 17 17 19 20 22 23 24 LCS_GDT V 3 V 3 4 6 10 3 4 4 5 6 7 10 10 10 12 13 14 16 17 18 19 20 22 23 24 LCS_GDT Q 4 Q 4 4 6 12 3 4 4 5 6 8 10 10 10 12 13 14 16 17 18 19 20 21 22 24 LCS_GDT G 5 G 5 4 6 12 3 4 4 5 6 8 10 10 10 12 13 14 16 17 18 19 20 21 22 24 LCS_GDT P 6 P 6 4 6 12 0 3 4 5 6 7 7 8 9 10 11 13 15 17 18 19 20 21 22 24 LCS_GDT W 7 W 7 4 6 12 0 3 4 5 6 7 7 8 10 10 11 13 15 17 18 19 20 21 22 24 LCS_GDT V 8 V 8 4 5 12 0 3 4 5 5 6 6 8 10 10 12 14 16 17 18 19 20 21 22 24 LCS_GDT G 9 G 9 4 5 12 3 3 5 5 5 5 6 8 9 10 11 13 15 16 18 19 20 21 22 24 LCS_GDT S 10 S 10 3 5 12 3 3 5 5 5 5 6 8 9 10 11 13 14 14 15 18 19 20 22 24 LCS_GDT S 11 S 11 4 4 12 3 3 5 5 5 5 6 8 8 10 10 11 13 14 15 16 18 20 22 24 LCS_GDT Y 12 Y 12 4 4 12 3 3 5 5 5 5 6 7 8 9 10 11 12 13 13 15 15 19 22 24 LCS_GDT V 13 V 13 4 4 12 3 3 4 4 4 5 6 8 9 10 11 13 14 14 15 16 19 20 22 24 LCS_GDT A 14 A 14 4 4 17 3 3 4 4 4 5 6 8 10 11 12 14 15 15 17 18 19 20 22 24 LCS_GDT E 15 E 15 3 7 17 3 3 3 4 6 7 8 9 10 13 15 16 17 17 17 18 19 21 23 25 LCS_GDT T 16 T 16 3 7 17 3 3 4 4 6 8 10 12 13 13 15 16 17 17 18 19 20 21 23 25 LCS_GDT G 17 G 17 3 7 17 3 3 4 5 6 8 10 12 13 13 15 16 17 17 18 19 20 21 23 25 LCS_GDT Q 18 Q 18 3 7 17 0 3 4 4 6 7 8 9 12 13 14 16 17 17 18 19 20 21 23 25 LCS_GDT N 19 N 19 4 7 17 3 4 4 5 6 7 8 9 12 13 15 16 17 17 17 18 20 22 23 25 LCS_GDT W 20 W 20 4 7 17 3 4 4 5 6 7 8 9 12 13 15 16 17 17 17 18 20 22 23 25 LCS_GDT A 21 A 21 4 7 17 3 4 4 6 6 7 8 9 12 13 15 16 17 17 17 18 19 22 23 25 LCS_GDT S 22 S 22 4 4 17 3 4 4 6 6 7 8 9 12 13 15 16 17 17 17 18 19 20 22 23 LCS_GDT L 23 L 23 4 5 17 3 4 4 6 6 6 8 9 10 12 15 16 17 17 17 19 20 22 23 25 LCS_GDT A 24 A 24 4 5 17 3 4 4 6 6 6 7 9 10 11 11 14 15 17 17 19 20 22 23 25 LCS_GDT A 25 A 25 4 5 17 3 4 4 4 6 7 8 9 12 13 15 16 17 17 17 19 20 22 23 25 LCS_GDT N 26 N 26 4 5 17 3 4 5 5 6 7 8 9 12 13 15 16 17 17 17 19 20 22 23 25 LCS_GDT E 27 E 27 3 11 17 3 3 6 9 9 11 12 12 13 14 15 16 17 17 17 19 20 22 23 25 LCS_GDT L 28 L 28 4 11 17 3 4 6 9 9 11 12 12 13 14 15 16 17 17 18 19 20 22 23 25 LCS_GDT R 29 R 29 4 11 17 3 3 4 5 7 10 12 12 13 14 15 16 17 17 18 19 20 22 23 25 LCS_GDT V 30 V 30 4 11 17 3 4 6 7 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT T 31 T 31 5 11 17 3 4 6 9 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT E 32 E 32 5 11 17 3 4 6 9 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT R 33 R 33 5 11 17 3 4 5 9 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT P 34 P 34 5 11 17 3 4 6 9 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT F 35 F 35 5 11 17 3 4 5 9 9 11 12 12 13 14 15 15 17 17 18 19 20 22 23 25 LCS_GDT W 36 W 36 4 11 17 3 4 6 9 9 11 12 12 13 14 15 15 17 17 17 19 20 22 23 25 LCS_GDT I 37 I 37 4 11 17 3 4 6 9 9 11 12 12 13 14 15 15 17 17 17 19 20 22 23 25 LCS_GDT S 38 S 38 3 9 17 1 3 5 7 9 11 12 12 13 14 15 15 17 17 17 19 20 22 23 25 LCS_GDT S 39 S 39 3 4 17 0 3 3 3 5 7 10 12 13 14 15 15 17 17 17 19 20 22 23 25 LCS_GDT F 40 F 40 3 4 17 0 3 3 3 5 5 6 8 11 14 15 16 17 17 17 19 19 20 23 25 LCS_GDT I 41 I 41 3 4 17 1 3 4 6 6 6 7 9 11 13 15 16 17 17 17 18 19 20 22 24 LCS_GDT G 42 G 42 3 4 17 1 3 4 6 6 6 7 8 11 12 13 14 17 17 17 18 19 20 21 21 LCS_GDT R 43 R 43 3 4 17 0 3 3 4 4 4 7 8 10 11 12 14 14 15 17 17 18 20 21 22 LCS_GDT S 44 S 44 3 4 15 0 3 3 4 4 4 5 6 8 10 10 10 12 12 13 15 15 17 18 22 LCS_GDT K 45 K 45 0 4 10 0 0 3 4 4 4 5 6 7 10 10 10 12 12 13 13 14 14 15 16 LCS_AVERAGE LCS_A: 19.58 ( 8.47 15.39 34.87 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 6 9 9 11 12 12 13 14 15 16 17 17 18 19 20 22 23 25 GDT PERCENT_AT 6.82 9.09 13.64 20.45 20.45 25.00 27.27 27.27 29.55 31.82 34.09 36.36 38.64 38.64 40.91 43.18 45.45 50.00 52.27 56.82 GDT RMS_LOCAL 0.00 0.47 0.85 1.34 1.34 1.93 2.12 2.12 2.79 3.19 3.65 4.11 4.49 4.49 5.16 5.28 5.54 6.47 6.66 7.19 GDT RMS_ALL_AT 18.90 19.38 14.75 13.95 13.95 14.32 14.43 14.43 14.93 15.30 15.85 15.76 15.53 15.53 12.03 12.13 12.06 13.70 13.62 14.04 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.571 0 0.072 0.115 10.947 0.000 0.000 - LGA V 3 V 3 12.020 0 0.055 0.097 13.634 0.000 0.000 13.634 LGA Q 4 Q 4 17.760 0 0.064 0.944 20.039 0.000 0.000 19.285 LGA G 5 G 5 22.211 0 0.307 0.307 22.211 0.000 0.000 - LGA P 6 P 6 22.348 0 0.674 0.599 25.703 0.000 0.000 25.703 LGA W 7 W 7 20.402 0 0.351 0.280 23.529 0.000 0.000 23.508 LGA V 8 V 8 18.967 0 0.678 0.695 20.087 0.000 0.000 19.126 LGA G 9 G 9 20.666 0 0.518 0.518 20.948 0.000 0.000 - LGA S 10 S 10 23.985 0 0.648 0.664 27.010 0.000 0.000 27.010 LGA S 11 S 11 20.395 0 0.550 0.789 21.389 0.000 0.000 16.737 LGA Y 12 Y 12 18.793 0 0.036 1.138 21.646 0.000 0.000 21.463 LGA V 13 V 13 18.669 0 0.614 1.455 21.690 0.000 0.000 21.690 LGA A 14 A 14 17.227 0 0.588 0.557 17.312 0.000 0.000 - LGA E 15 E 15 12.700 0 0.644 1.235 15.568 0.000 0.000 15.568 LGA T 16 T 16 10.651 0 0.550 0.449 11.514 0.000 0.000 8.591 LGA G 17 G 17 13.673 0 0.653 0.653 17.182 0.000 0.000 - LGA Q 18 Q 18 15.690 0 0.482 0.531 20.208 0.000 0.000 20.208 LGA N 19 N 19 17.218 0 0.637 1.180 20.683 0.000 0.000 20.683 LGA W 20 W 20 19.952 0 0.136 0.158 25.517 0.000 0.000 25.517 LGA A 21 A 21 18.511 0 0.653 0.602 18.922 0.000 0.000 - LGA S 22 S 22 21.879 0 0.090 0.622 25.572 0.000 0.000 25.572 LGA L 23 L 23 16.751 0 0.594 0.548 19.750 0.000 0.000 19.469 LGA A 24 A 24 12.600 0 0.635 0.607 14.577 0.000 0.000 - LGA A 25 A 25 11.375 0 0.302 0.319 13.583 0.000 0.000 - LGA N 26 N 26 8.093 0 0.622 0.936 12.913 0.000 0.000 11.107 LGA E 27 E 27 2.184 0 0.663 1.009 7.278 33.182 15.556 5.311 LGA L 28 L 28 1.378 0 0.279 0.285 2.143 58.182 58.409 2.143 LGA R 29 R 29 3.466 0 0.575 1.189 8.500 18.182 6.612 7.315 LGA V 30 V 30 2.904 0 0.312 1.134 6.663 48.636 27.792 6.402 LGA T 31 T 31 1.661 0 0.317 1.122 3.226 52.273 48.052 2.710 LGA E 32 E 32 0.639 0 0.326 0.859 3.796 73.636 50.505 3.472 LGA R 33 R 33 2.082 0 0.664 1.351 5.060 29.091 31.736 2.624 LGA P 34 P 34 0.936 0 0.697 0.651 3.616 56.364 41.818 3.616 LGA F 35 F 35 2.329 0 0.010 1.383 12.158 41.364 15.537 12.158 LGA W 36 W 36 0.564 0 0.036 0.040 3.560 70.000 46.234 3.560 LGA I 37 I 37 1.517 0 0.651 1.375 5.600 63.182 33.864 5.600 LGA S 38 S 38 3.256 0 0.679 0.833 6.449 16.818 12.121 6.449 LGA S 39 S 39 7.667 0 0.710 0.591 9.381 0.000 0.000 8.067 LGA F 40 F 40 8.260 0 0.628 1.324 11.744 0.000 0.000 11.744 LGA I 41 I 41 11.855 0 0.144 1.059 15.576 0.000 0.000 15.129 LGA G 42 G 42 16.546 0 0.683 0.683 17.098 0.000 0.000 - LGA R 43 R 43 18.445 0 0.284 1.234 24.339 0.000 0.000 20.993 LGA S 44 S 44 18.509 0 0.652 0.779 21.579 0.000 0.000 17.326 LGA K 45 K 45 17.957 0 0.638 0.735 20.037 0.000 0.000 12.109 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.483 11.385 12.192 12.748 8.824 3.792 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.12 25.000 23.455 0.539 LGA_LOCAL RMSD: 2.124 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.430 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.483 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.721491 * X + 0.627856 * Y + 0.291972 * Z + 174.441055 Y_new = -0.649776 * X + -0.759617 * Y + 0.027822 * Z + 207.068344 Z_new = 0.239254 * X + -0.169643 * Y + 0.956022 * Z + -142.683762 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.408445 -0.241598 -0.175619 [DEG: -137.9938 -13.8425 -10.0622 ] ZXZ: 1.665798 0.297671 2.187569 [DEG: 95.4432 17.0553 125.3385 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS156_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.12 23.455 11.48 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS156_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 4RU5_C ATOM 20 N ALA 2 15.832 39.324 17.099 1.00 1.83 ATOM 22 CA ALA 2 15.703 38.677 18.389 1.00 1.83 ATOM 24 CB ALA 2 17.064 38.309 19.014 1.00 1.83 ATOM 28 C ALA 2 14.974 39.594 19.342 1.00 1.83 ATOM 29 O ALA 2 15.261 40.789 19.411 1.00 1.83 ATOM 30 N VAL 3 13.983 39.043 20.078 1.00 1.83 ATOM 32 CA VAL 3 13.069 39.825 20.879 1.00 1.83 ATOM 34 CB VAL 3 11.622 39.696 20.398 1.00 1.83 ATOM 36 CG1 VAL 3 10.653 40.516 21.282 1.00 1.83 ATOM 40 CG2 VAL 3 11.522 40.157 18.929 1.00 1.83 ATOM 44 C VAL 3 13.149 39.381 22.318 1.00 1.83 ATOM 45 O VAL 3 12.893 38.218 22.641 1.00 1.83 ATOM 46 N GLN 4 13.467 40.348 23.214 1.00 2.00 ATOM 48 CA GLN 4 13.232 40.251 24.637 1.00 2.00 ATOM 50 CB GLN 4 14.472 40.556 25.518 1.00 2.00 ATOM 53 CG GLN 4 15.667 39.623 25.264 1.00 2.00 ATOM 56 CD GLN 4 15.301 38.188 25.636 1.00 2.00 ATOM 57 OE1 GLN 4 14.749 37.903 26.697 1.00 2.00 ATOM 58 NE2 GLN 4 15.577 37.247 24.705 1.00 2.00 ATOM 61 C GLN 4 12.205 41.311 24.913 1.00 2.00 ATOM 62 O GLN 4 12.366 42.456 24.489 1.00 2.00 ATOM 63 N GLY 5 11.099 40.953 25.605 1.00 2.25 ATOM 65 CA GLY 5 9.988 41.857 25.806 1.00 2.25 ATOM 68 C GLY 5 9.099 41.806 24.586 1.00 2.25 ATOM 69 O GLY 5 9.371 42.556 23.649 1.00 2.25 ATOM 70 N PRO 6 8.056 40.972 24.514 1.00 2.82 ATOM 71 CA PRO 6 7.314 40.714 23.282 1.00 2.82 ATOM 73 CB PRO 6 6.248 39.686 23.686 1.00 2.82 ATOM 76 CG PRO 6 6.863 38.940 24.871 1.00 2.82 ATOM 79 CD PRO 6 7.708 40.010 25.564 1.00 2.82 ATOM 82 C PRO 6 6.649 41.899 22.612 1.00 2.82 ATOM 83 O PRO 6 6.456 42.935 23.247 1.00 2.82 ATOM 84 N TRP 7 6.321 41.743 21.305 1.00 3.60 ATOM 86 CA TRP 7 5.831 42.804 20.442 1.00 3.60 ATOM 88 CB TRP 7 5.676 42.367 18.950 1.00 3.60 ATOM 91 CG TRP 7 6.940 42.047 18.173 1.00 3.60 ATOM 92 CD1 TRP 7 7.366 40.838 17.695 1.00 3.60 ATOM 94 NE1 TRP 7 8.512 40.995 16.948 1.00 3.60 ATOM 96 CE2 TRP 7 8.853 42.330 16.940 1.00 3.60 ATOM 97 CZ2 TRP 7 9.913 43.001 16.339 1.00 3.60 ATOM 99 CH2 TRP 7 9.994 44.393 16.509 1.00 3.60 ATOM 101 CZ3 TRP 7 9.027 45.087 17.258 1.00 3.60 ATOM 103 CE3 TRP 7 7.955 44.409 17.863 1.00 3.60 ATOM 105 CD2 TRP 7 7.886 43.025 17.700 1.00 3.60 ATOM 106 C TRP 7 4.447 43.292 20.822 1.00 3.60 ATOM 107 O TRP 7 3.565 42.496 21.148 1.00 3.60 ATOM 108 N VAL 8 4.246 44.635 20.751 1.00 4.39 ATOM 110 CA VAL 8 2.966 45.305 20.940 1.00 4.39 ATOM 112 CB VAL 8 2.822 45.916 22.345 1.00 4.39 ATOM 114 CG1 VAL 8 1.458 46.625 22.521 1.00 4.39 ATOM 118 CG2 VAL 8 3.001 44.824 23.425 1.00 4.39 ATOM 122 C VAL 8 2.921 46.425 19.900 1.00 4.39 ATOM 123 O VAL 8 3.957 47.022 19.606 1.00 4.39 ATOM 124 N GLY 9 1.732 46.760 19.311 1.00 5.25 ATOM 126 CA GLY 9 1.644 47.934 18.454 1.00 5.25 ATOM 129 C GLY 9 0.364 48.090 17.662 1.00 5.25 ATOM 130 O GLY 9 -0.118 47.172 16.994 1.00 5.25 ATOM 131 N SER 10 -0.184 49.332 17.670 1.00 5.83 ATOM 133 CA SER 10 -1.324 49.729 16.866 1.00 5.83 ATOM 135 CB SER 10 -2.265 50.718 17.592 1.00 5.83 ATOM 138 OG SER 10 -2.795 50.124 18.770 1.00 5.83 ATOM 140 C SER 10 -0.776 50.430 15.650 1.00 5.83 ATOM 141 O SER 10 -0.052 51.418 15.776 1.00 5.83 ATOM 142 N SER 11 -1.077 49.906 14.440 1.00 6.10 ATOM 144 CA SER 11 -0.315 50.239 13.256 1.00 6.10 ATOM 146 CB SER 11 0.877 49.245 13.080 1.00 6.10 ATOM 149 OG SER 11 0.434 47.908 12.851 1.00 6.10 ATOM 151 C SER 11 -1.164 50.279 12.009 1.00 6.10 ATOM 152 O SER 11 -2.366 50.021 12.031 1.00 6.10 ATOM 153 N TYR 12 -0.527 50.649 10.873 1.00 6.24 ATOM 155 CA TYR 12 -1.163 50.733 9.579 1.00 6.24 ATOM 157 CB TYR 12 -0.588 51.941 8.791 1.00 6.24 ATOM 160 CG TYR 12 -1.368 52.213 7.534 1.00 6.24 ATOM 161 CD1 TYR 12 -2.671 52.740 7.629 1.00 6.24 ATOM 163 CE1 TYR 12 -3.401 53.064 6.477 1.00 6.24 ATOM 165 CZ TYR 12 -2.823 52.885 5.212 1.00 6.24 ATOM 166 OH TYR 12 -3.543 53.249 4.054 1.00 6.24 ATOM 168 CE2 TYR 12 -1.524 52.362 5.102 1.00 6.24 ATOM 170 CD2 TYR 12 -0.801 52.028 6.260 1.00 6.24 ATOM 172 C TYR 12 -0.940 49.420 8.855 1.00 6.24 ATOM 173 O TYR 12 -1.811 48.960 8.120 1.00 6.24 ATOM 174 N VAL 13 0.247 48.795 9.055 1.00 6.34 ATOM 176 CA VAL 13 0.592 47.483 8.561 1.00 6.34 ATOM 178 CB VAL 13 1.346 47.450 7.234 1.00 6.34 ATOM 180 CG1 VAL 13 0.444 48.054 6.140 1.00 6.34 ATOM 184 CG2 VAL 13 2.712 48.173 7.302 1.00 6.34 ATOM 188 C VAL 13 1.443 46.876 9.647 1.00 6.34 ATOM 189 O VAL 13 2.078 47.590 10.424 1.00 6.34 ATOM 190 N ALA 14 1.455 45.532 9.735 1.00 6.71 ATOM 192 CA ALA 14 2.193 44.818 10.741 1.00 6.71 ATOM 194 CB ALA 14 1.272 44.227 11.824 1.00 6.71 ATOM 198 C ALA 14 2.897 43.679 10.069 1.00 6.71 ATOM 199 O ALA 14 2.305 42.648 9.766 1.00 6.71 ATOM 200 N GLU 15 4.208 43.844 9.813 1.00 7.63 ATOM 202 CA GLU 15 5.026 42.811 9.236 1.00 7.63 ATOM 204 CB GLU 15 6.016 43.374 8.191 1.00 7.63 ATOM 207 CG GLU 15 5.308 43.969 6.953 1.00 7.63 ATOM 210 CD GLU 15 6.336 44.485 5.949 1.00 7.63 ATOM 211 OE1 GLU 15 6.359 43.977 4.798 1.00 7.63 ATOM 212 OE2 GLU 15 7.117 45.400 6.319 1.00 7.63 ATOM 213 C GLU 15 5.793 42.195 10.368 1.00 7.63 ATOM 214 O GLU 15 6.459 42.893 11.133 1.00 7.63 ATOM 215 N THR 16 5.667 40.860 10.516 1.00 8.48 ATOM 217 CA THR 16 6.327 40.093 11.538 1.00 8.48 ATOM 219 CB THR 16 5.378 39.619 12.637 1.00 8.48 ATOM 221 CG2 THR 16 4.877 40.839 13.437 1.00 8.48 ATOM 225 OG1 THR 16 4.249 38.919 12.120 1.00 8.48 ATOM 227 C THR 16 7.000 38.926 10.862 1.00 8.48 ATOM 228 O THR 16 6.387 37.879 10.650 1.00 8.48 ATOM 229 N GLY 17 8.298 39.089 10.513 1.00 8.69 ATOM 231 CA GLY 17 9.062 38.063 9.840 1.00 8.69 ATOM 234 C GLY 17 10.460 38.014 10.383 1.00 8.69 ATOM 235 O GLY 17 11.025 39.037 10.774 1.00 8.69 ATOM 236 N GLN 18 11.045 36.785 10.402 1.00 8.33 ATOM 238 CA GLN 18 12.366 36.437 10.903 1.00 8.33 ATOM 240 CB GLN 18 13.538 36.995 10.041 1.00 8.33 ATOM 243 CG GLN 18 13.616 36.431 8.604 1.00 8.33 ATOM 246 CD GLN 18 13.974 34.939 8.618 1.00 8.33 ATOM 247 OE1 GLN 18 14.918 34.520 9.284 1.00 8.33 ATOM 248 NE2 GLN 18 13.219 34.104 7.861 1.00 8.33 ATOM 251 C GLN 18 12.566 36.790 12.357 1.00 8.33 ATOM 252 O GLN 18 13.644 37.222 12.770 1.00 8.33 ATOM 253 N ASN 19 11.507 36.605 13.176 1.00 7.40 ATOM 255 CA ASN 19 11.552 36.901 14.586 1.00 7.40 ATOM 257 CB ASN 19 10.288 37.619 15.125 1.00 7.40 ATOM 260 CG ASN 19 10.216 39.017 14.502 1.00 7.40 ATOM 261 OD1 ASN 19 11.124 39.824 14.699 1.00 7.40 ATOM 262 ND2 ASN 19 9.133 39.335 13.755 1.00 7.40 ATOM 265 C ASN 19 11.851 35.669 15.388 1.00 7.40 ATOM 266 O ASN 19 11.541 34.542 15.008 1.00 7.40 ATOM 267 N TRP 20 12.518 35.897 16.534 1.00 6.60 ATOM 269 CA TRP 20 12.846 34.888 17.501 1.00 6.60 ATOM 271 CB TRP 20 14.329 34.446 17.430 1.00 6.60 ATOM 274 CG TRP 20 14.639 33.641 16.179 1.00 6.60 ATOM 275 CD1 TRP 20 15.132 34.030 14.962 1.00 6.60 ATOM 277 NE1 TRP 20 15.246 32.940 14.124 1.00 6.60 ATOM 279 CE2 TRP 20 14.850 31.813 14.812 1.00 6.60 ATOM 280 CZ2 TRP 20 14.790 30.473 14.432 1.00 6.60 ATOM 282 CH2 TRP 20 14.332 29.538 15.376 1.00 6.60 ATOM 284 CZ3 TRP 20 13.945 29.941 16.665 1.00 6.60 ATOM 286 CE3 TRP 20 14.009 31.289 17.050 1.00 6.60 ATOM 288 CD2 TRP 20 14.461 32.215 16.109 1.00 6.60 ATOM 289 C TRP 20 12.530 35.475 18.837 1.00 6.60 ATOM 290 O TRP 20 13.316 36.212 19.431 1.00 6.60 ATOM 291 N ALA 21 11.323 35.143 19.337 1.00 6.39 ATOM 293 CA ALA 21 10.933 35.447 20.679 1.00 6.39 ATOM 295 CB ALA 21 9.415 35.685 20.822 1.00 6.39 ATOM 299 C ALA 21 11.322 34.255 21.475 1.00 6.39 ATOM 300 O ALA 21 10.946 33.130 21.143 1.00 6.39 ATOM 301 N SER 22 12.065 34.493 22.580 1.00 6.42 ATOM 303 CA SER 22 12.524 33.457 23.482 1.00 6.42 ATOM 305 CB SER 22 13.430 34.002 24.604 1.00 6.42 ATOM 308 OG SER 22 14.630 34.517 24.042 1.00 6.42 ATOM 310 C SER 22 11.364 32.707 24.095 1.00 6.42 ATOM 311 O SER 22 11.522 31.576 24.546 1.00 6.42 ATOM 312 N LEU 23 10.158 33.317 24.072 1.00 6.56 ATOM 314 CA LEU 23 8.927 32.642 24.380 1.00 6.56 ATOM 316 CB LEU 23 7.855 33.614 24.933 1.00 6.56 ATOM 319 CG LEU 23 8.248 34.374 26.218 1.00 6.56 ATOM 321 CD1 LEU 23 7.134 35.361 26.613 1.00 6.56 ATOM 325 CD2 LEU 23 8.610 33.448 27.394 1.00 6.56 ATOM 329 C LEU 23 8.352 31.993 23.138 1.00 6.56 ATOM 330 O LEU 23 7.879 32.648 22.207 1.00 6.56 ATOM 331 N ALA 24 8.315 30.643 23.136 1.00 6.58 ATOM 333 CA ALA 24 7.465 29.891 22.246 1.00 6.58 ATOM 335 CB ALA 24 7.847 28.399 22.168 1.00 6.58 ATOM 339 C ALA 24 6.062 30.030 22.784 1.00 6.58 ATOM 340 O ALA 24 5.859 30.139 23.992 1.00 6.58 ATOM 341 N ALA 25 5.089 30.085 21.863 1.00 6.45 ATOM 343 CA ALA 25 3.697 30.410 22.059 1.00 6.45 ATOM 345 CB ALA 25 2.951 29.595 23.139 1.00 6.45 ATOM 349 C ALA 25 3.441 31.885 22.209 1.00 6.45 ATOM 350 O ALA 25 2.357 32.282 22.627 1.00 6.45 ATOM 351 N ASN 26 4.405 32.741 21.796 1.00 6.29 ATOM 353 CA ASN 26 4.205 34.162 21.696 1.00 6.29 ATOM 355 CB ASN 26 5.548 34.920 21.822 1.00 6.29 ATOM 358 CG ASN 26 5.350 36.433 21.753 1.00 6.29 ATOM 359 OD1 ASN 26 4.612 36.988 22.562 1.00 6.29 ATOM 360 ND2 ASN 26 6.008 37.111 20.780 1.00 6.29 ATOM 363 C ASN 26 3.582 34.439 20.357 1.00 6.29 ATOM 364 O ASN 26 4.127 34.085 19.316 1.00 6.29 ATOM 365 N GLU 27 2.422 35.123 20.386 1.00 6.13 ATOM 367 CA GLU 27 1.622 35.508 19.254 1.00 6.13 ATOM 369 CB GLU 27 0.342 36.207 19.776 1.00 6.13 ATOM 372 CG GLU 27 -0.500 35.250 20.649 1.00 6.13 ATOM 375 CD GLU 27 -1.691 35.933 21.306 1.00 6.13 ATOM 376 OE1 GLU 27 -1.475 36.944 22.023 1.00 6.13 ATOM 377 OE2 GLU 27 -2.833 35.432 21.135 1.00 6.13 ATOM 378 C GLU 27 2.407 36.461 18.397 1.00 6.13 ATOM 379 O GLU 27 3.119 37.326 18.906 1.00 6.13 ATOM 380 N LEU 28 2.313 36.310 17.058 1.00 6.16 ATOM 382 CA LEU 28 2.927 37.241 16.138 1.00 6.16 ATOM 384 CB LEU 28 2.924 36.704 14.692 1.00 6.16 ATOM 387 CG LEU 28 3.875 35.513 14.478 1.00 6.16 ATOM 389 CD1 LEU 28 3.682 34.883 13.101 1.00 6.16 ATOM 393 CD2 LEU 28 5.357 35.907 14.656 1.00 6.16 ATOM 397 C LEU 28 2.170 38.546 16.197 1.00 6.16 ATOM 398 O LEU 28 2.775 39.610 16.327 1.00 6.16 ATOM 399 N ARG 29 0.820 38.450 16.154 1.00 6.63 ATOM 401 CA ARG 29 -0.090 39.558 16.307 1.00 6.63 ATOM 403 CB ARG 29 -0.216 40.369 14.983 1.00 6.63 ATOM 406 CG ARG 29 -0.931 41.734 15.070 1.00 6.63 ATOM 409 CD ARG 29 -0.147 42.819 15.831 1.00 6.63 ATOM 412 NE ARG 29 1.140 43.063 15.102 1.00 6.63 ATOM 414 CZ ARG 29 2.166 43.788 15.619 1.00 6.63 ATOM 415 NH1 ARG 29 2.080 44.430 16.807 1.00 6.63 ATOM 418 NH2 ARG 29 3.316 43.885 14.915 1.00 6.63 ATOM 421 C ARG 29 -1.448 38.978 16.646 1.00 6.63 ATOM 422 O ARG 29 -1.757 37.877 16.194 1.00 6.63 ATOM 423 N VAL 30 -2.272 39.718 17.442 1.00 7.16 ATOM 425 CA VAL 30 -3.696 39.521 17.687 1.00 7.16 ATOM 427 CB VAL 30 -4.102 38.491 18.757 1.00 7.16 ATOM 429 CG1 VAL 30 -3.696 37.065 18.336 1.00 7.16 ATOM 433 CG2 VAL 30 -3.486 38.857 20.129 1.00 7.16 ATOM 437 C VAL 30 -4.254 40.894 18.012 1.00 7.16 ATOM 438 O VAL 30 -3.579 41.899 17.787 1.00 7.16 ATOM 439 N THR 31 -5.513 40.963 18.536 1.00 7.35 ATOM 441 CA THR 31 -6.227 42.149 18.985 1.00 7.35 ATOM 443 CB THR 31 -5.497 43.033 19.999 1.00 7.35 ATOM 445 CG2 THR 31 -6.406 44.200 20.456 1.00 7.35 ATOM 449 OG1 THR 31 -5.160 42.268 21.151 1.00 7.35 ATOM 451 C THR 31 -6.741 42.932 17.811 1.00 7.35 ATOM 452 O THR 31 -7.939 42.914 17.528 1.00 7.35 ATOM 453 N GLU 32 -5.844 43.624 17.071 1.00 7.42 ATOM 455 CA GLU 32 -6.225 44.409 15.926 1.00 7.42 ATOM 457 CB GLU 32 -5.465 45.733 15.777 1.00 7.42 ATOM 460 CG GLU 32 -5.722 46.634 17.005 1.00 7.42 ATOM 463 CD GLU 32 -5.058 48.003 16.899 1.00 7.42 ATOM 464 OE1 GLU 32 -4.381 48.309 15.886 1.00 7.42 ATOM 465 OE2 GLU 32 -5.266 48.791 17.859 1.00 7.42 ATOM 466 C GLU 32 -6.238 43.548 14.696 1.00 7.42 ATOM 467 O GLU 32 -5.419 43.646 13.782 1.00 7.42 ATOM 468 N ARG 33 -7.283 42.700 14.654 1.00 7.37 ATOM 470 CA ARG 33 -7.651 41.863 13.547 1.00 7.37 ATOM 472 CB ARG 33 -8.899 40.998 13.847 1.00 7.37 ATOM 475 CG ARG 33 -8.614 39.910 14.894 1.00 7.37 ATOM 478 CD ARG 33 -9.817 38.997 15.172 1.00 7.37 ATOM 481 NE ARG 33 -9.467 38.034 16.269 1.00 7.37 ATOM 483 CZ ARG 33 -8.789 36.873 16.066 1.00 7.37 ATOM 484 NH1 ARG 33 -8.548 36.065 17.123 1.00 7.37 ATOM 487 NH2 ARG 33 -8.357 36.482 14.844 1.00 7.37 ATOM 490 C ARG 33 -7.828 42.583 12.223 1.00 7.37 ATOM 491 O ARG 33 -7.434 41.967 11.232 1.00 7.37 ATOM 492 N PRO 34 -8.367 43.807 12.076 1.00 7.42 ATOM 493 CA PRO 34 -8.496 44.424 10.763 1.00 7.42 ATOM 495 CB PRO 34 -9.514 45.565 10.963 1.00 7.42 ATOM 498 CG PRO 34 -9.411 45.909 12.448 1.00 7.42 ATOM 501 CD PRO 34 -9.170 44.534 13.070 1.00 7.42 ATOM 504 C PRO 34 -7.223 44.957 10.148 1.00 7.42 ATOM 505 O PRO 34 -7.281 45.274 8.961 1.00 7.42 ATOM 506 N PHE 35 -6.075 45.110 10.857 1.00 7.75 ATOM 508 CA PHE 35 -4.931 45.707 10.178 1.00 7.75 ATOM 510 CB PHE 35 -4.007 46.589 11.055 1.00 7.75 ATOM 513 CG PHE 35 -4.730 47.893 11.309 1.00 7.75 ATOM 514 CD1 PHE 35 -5.348 48.173 12.538 1.00 7.75 ATOM 516 CE1 PHE 35 -6.053 49.369 12.741 1.00 7.75 ATOM 518 CZ PHE 35 -6.147 50.308 11.703 1.00 7.75 ATOM 520 CE2 PHE 35 -5.540 50.047 10.465 1.00 7.75 ATOM 522 CD2 PHE 35 -4.842 48.846 10.275 1.00 7.75 ATOM 524 C PHE 35 -4.184 44.690 9.355 1.00 7.75 ATOM 525 O PHE 35 -4.194 43.497 9.633 1.00 7.75 ATOM 526 N TRP 36 -3.571 45.156 8.243 1.00 8.03 ATOM 528 CA TRP 36 -2.954 44.304 7.249 1.00 8.03 ATOM 530 CB TRP 36 -2.673 45.066 5.937 1.00 8.03 ATOM 533 CG TRP 36 -3.958 45.445 5.228 1.00 8.03 ATOM 534 CD1 TRP 36 -4.624 46.639 5.225 1.00 8.03 ATOM 536 NE1 TRP 36 -5.787 46.535 4.495 1.00 8.03 ATOM 538 CE2 TRP 36 -5.874 45.256 3.986 1.00 8.03 ATOM 539 CZ2 TRP 36 -6.833 44.648 3.180 1.00 8.03 ATOM 541 CH2 TRP 36 -6.624 43.315 2.795 1.00 8.03 ATOM 543 CZ3 TRP 36 -5.488 42.606 3.225 1.00 8.03 ATOM 545 CE3 TRP 36 -4.531 43.210 4.056 1.00 8.03 ATOM 547 CD2 TRP 36 -4.736 44.542 4.422 1.00 8.03 ATOM 548 C TRP 36 -1.668 43.722 7.788 1.00 8.03 ATOM 549 O TRP 36 -0.889 44.425 8.425 1.00 8.03 ATOM 550 N ILE 37 -1.468 42.399 7.580 1.00 8.10 ATOM 552 CA ILE 37 -0.451 41.612 8.262 1.00 8.10 ATOM 554 CB ILE 37 -1.053 40.597 9.283 1.00 8.10 ATOM 556 CG2 ILE 37 0.000 39.654 9.936 1.00 8.10 ATOM 560 CG1 ILE 37 -1.841 41.311 10.401 1.00 8.10 ATOM 563 CD1 ILE 37 -2.643 40.389 11.332 1.00 8.10 ATOM 567 C ILE 37 0.364 40.806 7.273 1.00 8.10 ATOM 568 O ILE 37 -0.180 40.266 6.314 1.00 8.10 ATOM 569 N SER 38 1.694 40.676 7.537 1.00 8.03 ATOM 571 CA SER 38 2.582 39.704 6.910 1.00 8.03 ATOM 573 CB SER 38 3.725 40.404 6.117 1.00 8.03 ATOM 576 OG SER 38 4.648 39.490 5.529 1.00 8.03 ATOM 578 C SER 38 3.201 38.813 8.005 1.00 8.03 ATOM 579 O SER 38 3.621 39.345 9.034 1.00 8.03 ATOM 580 N SER 39 3.260 37.454 7.780 1.00 7.93 ATOM 582 CA SER 39 3.786 36.399 8.672 1.00 7.93 ATOM 584 CB SER 39 2.799 36.098 9.830 1.00 7.93 ATOM 587 OG SER 39 1.556 35.575 9.373 1.00 7.93 ATOM 589 C SER 39 4.076 35.065 7.906 1.00 7.93 ATOM 590 O SER 39 3.561 34.950 6.800 1.00 7.93 ATOM 591 N PHE 40 4.863 34.036 8.448 1.00 7.79 ATOM 593 CA PHE 40 5.123 32.718 7.796 1.00 7.79 ATOM 595 CB PHE 40 5.938 32.826 6.462 1.00 7.79 ATOM 598 CG PHE 40 7.295 33.473 6.629 1.00 7.79 ATOM 599 CD1 PHE 40 8.439 32.687 6.870 1.00 7.79 ATOM 601 CE1 PHE 40 9.703 33.279 7.015 1.00 7.79 ATOM 603 CZ PHE 40 9.837 34.671 6.919 1.00 7.79 ATOM 605 CE2 PHE 40 8.710 35.469 6.683 1.00 7.79 ATOM 607 CD2 PHE 40 7.451 34.872 6.533 1.00 7.79 ATOM 609 C PHE 40 5.810 31.634 8.674 1.00 7.79 ATOM 610 O PHE 40 6.686 31.956 9.473 1.00 7.79 ATOM 611 N ILE 41 5.454 30.307 8.532 1.00 7.59 ATOM 613 CA ILE 41 5.974 29.224 9.374 1.00 7.59 ATOM 615 CB ILE 41 5.287 29.262 10.752 1.00 7.59 ATOM 617 CG2 ILE 41 3.757 29.060 10.609 1.00 7.59 ATOM 621 CG1 ILE 41 5.951 28.364 11.820 1.00 7.59 ATOM 624 CD1 ILE 41 5.497 28.665 13.249 1.00 7.59 ATOM 628 C ILE 41 5.806 27.872 8.691 1.00 7.59 ATOM 629 O ILE 41 5.010 27.733 7.765 1.00 7.59 ATOM 630 N GLY 42 6.543 26.815 9.127 1.00 7.31 ATOM 632 CA GLY 42 6.348 25.493 8.587 1.00 7.31 ATOM 635 C GLY 42 6.870 24.472 9.527 1.00 7.31 ATOM 636 O GLY 42 7.791 24.700 10.308 1.00 7.31 ATOM 637 N ARG 43 6.285 23.266 9.425 1.00 7.07 ATOM 639 CA ARG 43 6.842 22.074 9.975 1.00 7.07 ATOM 641 CB ARG 43 5.938 21.386 11.008 1.00 7.07 ATOM 644 CG ARG 43 5.690 22.283 12.246 1.00 7.07 ATOM 647 CD ARG 43 6.891 22.517 13.180 1.00 7.07 ATOM 650 NE ARG 43 7.315 21.198 13.761 1.00 7.07 ATOM 652 CZ ARG 43 6.738 20.659 14.870 1.00 7.07 ATOM 653 NH1 ARG 43 7.096 19.415 15.253 1.00 7.07 ATOM 656 NH2 ARG 43 5.820 21.316 15.621 1.00 7.07 ATOM 659 C ARG 43 7.069 21.311 8.708 1.00 7.07 ATOM 660 O ARG 43 6.290 20.460 8.277 1.00 7.07 ATOM 661 N SER 44 8.205 21.691 8.087 1.00 6.88 ATOM 663 CA SER 44 8.927 20.974 7.071 1.00 6.88 ATOM 665 CB SER 44 9.670 21.923 6.100 1.00 6.88 ATOM 668 OG SER 44 10.654 22.712 6.762 1.00 6.88 ATOM 670 C SER 44 9.877 20.037 7.781 1.00 6.88 ATOM 671 O SER 44 10.467 19.144 7.181 1.00 6.88 ATOM 672 N LYS 45 9.946 20.184 9.130 1.00 6.70 ATOM 674 CA LYS 45 10.337 19.158 10.065 1.00 6.70 ATOM 676 CB LYS 45 10.356 19.649 11.532 1.00 6.70 ATOM 679 CG LYS 45 11.478 20.642 11.852 1.00 6.70 ATOM 682 CD LYS 45 11.467 21.061 13.328 1.00 6.70 ATOM 685 CE LYS 45 12.590 22.038 13.698 1.00 6.70 ATOM 688 NZ LYS 45 12.517 22.397 15.129 1.00 6.70 ATOM 692 C LYS 45 9.353 18.017 9.995 1.00 6.70 ATOM 693 O LYS 45 9.760 16.877 10.193 1.00 6.70 TER END