####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS160_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS160_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 5 - 25 4.98 19.30 LONGEST_CONTINUOUS_SEGMENT: 21 6 - 26 4.95 18.94 LCS_AVERAGE: 41.43 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.89 16.71 LCS_AVERAGE: 15.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.69 16.92 LCS_AVERAGE: 11.57 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 17 4 4 4 7 8 9 11 12 15 15 19 21 26 27 28 29 29 31 31 32 LCS_GDT V 3 V 3 4 6 17 3 4 4 7 8 9 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT Q 4 Q 4 4 6 20 3 4 6 7 8 9 10 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT G 5 G 5 4 6 21 3 4 6 7 8 9 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT P 6 P 6 4 6 21 3 4 6 7 8 9 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT W 7 W 7 4 6 21 3 4 6 7 8 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT V 8 V 8 4 6 21 3 4 4 5 6 7 8 11 13 16 20 22 26 27 28 29 29 31 31 32 LCS_GDT G 9 G 9 4 6 21 3 4 5 5 7 9 9 11 12 15 20 22 26 27 28 29 29 31 31 32 LCS_GDT S 10 S 10 3 6 21 3 3 5 5 7 9 9 11 12 16 20 22 26 27 28 29 29 31 31 32 LCS_GDT S 11 S 11 3 6 21 3 3 4 5 5 6 8 11 11 13 16 17 18 19 21 25 26 31 31 32 LCS_GDT Y 12 Y 12 3 4 21 3 3 5 5 7 9 9 11 11 13 16 17 19 22 27 29 29 31 31 32 LCS_GDT V 13 V 13 3 5 21 3 3 4 5 7 8 10 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT A 14 A 14 4 5 21 3 4 6 6 7 9 10 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT E 15 E 15 4 5 21 3 4 6 6 7 9 9 11 12 14 18 22 23 26 28 29 29 31 31 32 LCS_GDT T 16 T 16 4 5 21 3 4 4 5 6 7 10 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT G 17 G 17 4 5 21 3 4 4 5 6 7 8 11 13 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT Q 18 Q 18 4 4 21 3 3 4 5 6 7 9 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT N 19 N 19 4 11 21 3 3 4 6 6 10 11 14 15 15 19 21 26 27 28 29 29 31 31 32 LCS_GDT W 20 W 20 10 11 21 6 10 10 10 10 10 10 11 13 13 16 17 20 21 26 28 28 31 31 32 LCS_GDT A 21 A 21 10 11 21 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT S 22 S 22 10 11 21 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT L 23 L 23 10 11 21 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT A 24 A 24 10 11 21 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT A 25 A 25 10 11 21 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT N 26 N 26 10 11 21 3 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT E 27 E 27 10 11 17 3 10 10 10 10 10 11 14 15 15 18 21 26 27 28 29 29 31 31 32 LCS_GDT L 28 L 28 10 11 17 4 10 10 10 10 10 11 14 15 15 18 21 26 27 28 29 29 31 31 32 LCS_GDT R 29 R 29 10 11 17 4 10 10 10 10 10 11 14 15 15 18 19 25 27 28 29 29 31 31 32 LCS_GDT V 30 V 30 4 6 17 4 4 5 5 5 7 10 11 12 13 18 21 26 27 28 29 29 31 31 32 LCS_GDT T 31 T 31 4 6 17 3 4 5 7 7 8 10 12 16 17 20 22 26 27 28 29 29 31 31 32 LCS_GDT E 32 E 32 4 6 17 2 4 5 5 6 7 9 11 16 17 19 22 26 27 28 29 29 31 31 32 LCS_GDT R 33 R 33 4 6 16 2 4 5 5 5 7 8 10 12 12 13 17 21 23 25 27 29 30 31 32 LCS_GDT P 34 P 34 4 6 14 1 4 5 5 5 7 8 10 12 12 13 13 14 14 20 21 23 26 26 30 LCS_GDT F 35 F 35 3 6 14 0 3 4 5 5 7 8 10 12 12 13 13 13 13 14 15 17 21 23 26 LCS_GDT W 36 W 36 3 6 14 1 3 4 5 5 7 8 10 12 12 13 13 13 13 14 14 15 17 18 22 LCS_GDT I 37 I 37 3 6 14 0 3 4 5 5 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT S 38 S 38 3 6 14 3 3 4 5 5 7 8 10 12 12 13 13 13 13 13 14 14 15 15 15 LCS_GDT S 39 S 39 3 6 14 3 3 4 6 6 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT F 40 F 40 3 6 14 3 3 4 6 6 6 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT I 41 I 41 4 6 14 3 3 4 6 6 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT G 42 G 42 4 6 14 3 3 4 6 6 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT R 43 R 43 4 6 14 3 3 4 6 6 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT S 44 S 44 4 6 14 3 3 4 6 6 7 8 10 12 12 13 13 13 13 13 14 14 14 14 15 LCS_GDT K 45 K 45 3 5 14 0 3 3 3 5 7 8 9 11 12 13 13 13 13 13 14 14 14 14 15 LCS_AVERAGE LCS_A: 22.99 ( 11.57 15.96 41.43 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 10 10 10 10 11 14 16 17 20 22 26 27 28 29 29 31 31 32 GDT PERCENT_AT 13.64 22.73 22.73 22.73 22.73 22.73 25.00 31.82 36.36 38.64 45.45 50.00 59.09 61.36 63.64 65.91 65.91 70.45 70.45 72.73 GDT RMS_LOCAL 0.28 0.69 0.69 0.69 0.69 0.69 2.26 2.83 3.65 3.74 4.20 4.38 4.90 4.99 5.13 5.31 5.31 5.76 5.77 5.99 GDT RMS_ALL_AT 17.11 16.92 16.92 16.92 16.92 16.92 16.59 16.90 17.13 17.07 17.37 17.43 16.50 16.43 16.57 16.66 16.66 16.73 16.71 16.81 # Checking swapping # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 4.805 0 0.128 0.166 6.253 0.455 0.364 - LGA V 3 V 3 3.852 0 0.190 1.106 5.748 5.909 20.000 2.693 LGA Q 4 Q 4 6.020 0 0.079 0.123 13.400 5.909 2.626 11.573 LGA G 5 G 5 3.565 0 0.061 0.061 5.492 5.909 5.909 - LGA P 6 P 6 2.570 0 0.635 0.560 5.362 44.091 27.532 5.362 LGA W 7 W 7 3.614 0 0.356 0.414 7.055 7.273 7.792 4.834 LGA V 8 V 8 7.978 0 0.085 0.091 11.187 0.000 0.000 11.187 LGA G 9 G 9 9.681 0 0.571 0.571 13.123 0.000 0.000 - LGA S 10 S 10 12.241 0 0.614 0.666 13.606 0.000 0.000 9.735 LGA S 11 S 11 16.426 0 0.412 0.433 18.755 0.000 0.000 18.755 LGA Y 12 Y 12 13.310 0 0.587 0.548 14.164 0.000 0.000 10.380 LGA V 13 V 13 10.205 0 0.617 0.629 12.059 0.000 0.000 8.551 LGA A 14 A 14 13.204 0 0.622 0.598 13.432 0.000 0.000 - LGA E 15 E 15 14.799 0 0.062 1.150 22.401 0.000 0.000 21.603 LGA T 16 T 16 10.902 0 0.157 1.136 11.955 0.000 0.000 10.588 LGA G 17 G 17 9.878 0 0.215 0.215 9.878 0.000 0.000 - LGA Q 18 Q 18 8.207 0 0.611 1.367 14.568 0.000 0.000 11.592 LGA N 19 N 19 1.929 0 0.043 1.000 4.768 28.182 26.364 4.768 LGA W 20 W 20 5.939 0 0.611 0.490 15.356 1.818 0.519 15.356 LGA A 21 A 21 3.444 0 0.067 0.068 4.479 22.273 21.455 - LGA S 22 S 22 3.336 0 0.037 0.629 4.195 20.455 19.091 2.830 LGA L 23 L 23 3.762 0 0.030 0.147 6.743 16.818 8.636 6.743 LGA A 24 A 24 3.002 0 0.065 0.062 3.441 28.182 26.182 - LGA A 25 A 25 0.658 0 0.056 0.050 1.480 82.273 82.182 - LGA N 26 N 26 1.372 0 0.657 0.607 3.521 57.727 43.182 2.370 LGA E 27 E 27 1.822 0 0.284 0.811 3.625 70.455 51.313 2.327 LGA L 28 L 28 1.980 0 0.180 0.215 3.201 45.455 37.955 2.727 LGA R 29 R 29 2.292 0 0.371 1.377 13.121 26.364 9.752 13.121 LGA V 30 V 30 7.694 0 0.601 0.543 12.215 0.000 0.000 12.215 LGA T 31 T 31 10.090 0 0.134 0.142 13.410 0.000 0.000 9.571 LGA E 32 E 32 12.705 0 0.448 1.273 15.415 0.000 0.000 12.309 LGA R 33 R 33 19.127 0 0.144 1.147 20.846 0.000 0.000 17.184 LGA P 34 P 34 24.154 0 0.102 0.613 26.694 0.000 0.000 26.694 LGA F 35 F 35 23.370 0 0.476 1.244 25.253 0.000 0.000 24.367 LGA W 36 W 36 27.138 0 0.140 1.131 35.300 0.000 0.000 35.300 LGA I 37 I 37 29.760 0 0.663 1.236 32.966 0.000 0.000 32.497 LGA S 38 S 38 30.593 0 0.681 0.791 31.164 0.000 0.000 29.394 LGA S 39 S 39 29.270 0 0.081 0.177 30.151 0.000 0.000 27.623 LGA F 40 F 40 31.237 0 0.145 0.882 34.795 0.000 0.000 33.193 LGA I 41 I 41 33.127 0 0.188 0.229 38.740 0.000 0.000 38.740 LGA G 42 G 42 28.811 0 0.042 0.042 30.555 0.000 0.000 - LGA R 43 R 43 26.790 0 0.673 1.259 28.513 0.000 0.000 19.144 LGA S 44 S 44 30.569 0 0.716 0.795 33.031 0.000 0.000 33.031 LGA K 45 K 45 32.273 0 0.036 0.712 41.042 0.000 0.000 41.042 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 14.256 14.096 15.366 10.671 8.883 4.623 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.83 35.795 29.837 0.478 LGA_LOCAL RMSD: 2.827 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.903 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 14.256 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.600261 * X + -0.770383 * Y + 0.214933 * Z + 72.545563 Y_new = 0.775913 * X + -0.495719 * Y + 0.390155 * Z + 28.237627 Z_new = -0.194022 * X + 0.400964 * Y + 0.895312 * Z + -9.324473 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.229243 0.195261 0.421063 [DEG: 127.7262 11.1876 24.1252 ] ZXZ: 2.638065 0.461666 -0.450676 [DEG: 151.1500 26.4515 -25.8219 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS160_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS160_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.83 29.837 14.26 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS160_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 3jur_D ATOM 11 N ALA 2 6.118 32.781 14.710 1.00 25.05 ATOM 12 CA ALA 2 6.918 33.105 13.576 1.00 25.05 ATOM 13 C ALA 2 6.024 32.841 12.301 1.00 25.05 ATOM 14 O ALA 2 5.519 31.735 12.120 1.00 25.05 ATOM 15 CB ALA 2 8.193 32.273 13.507 1.00 25.05 ATOM 17 N VAL 3 5.921 33.946 11.499 1.00 23.31 ATOM 18 CA VAL 3 5.288 33.905 10.195 1.00 23.31 ATOM 19 C VAL 3 6.321 33.213 9.370 1.00 23.31 ATOM 20 O VAL 3 7.458 33.059 9.809 1.00 23.31 ATOM 21 CB VAL 3 4.952 35.280 9.578 1.00 23.31 ATOM 22 CG1 VAL 3 3.953 36.031 10.455 1.00 23.31 ATOM 23 CG2 VAL 3 6.216 36.129 9.447 1.00 23.31 ATOM 25 N GLN 4 5.872 32.803 8.141 1.00 22.83 ATOM 26 CA GLN 4 6.752 32.590 7.000 1.00 22.83 ATOM 27 C GLN 4 7.103 33.881 6.438 1.00 22.83 ATOM 28 O GLN 4 6.443 34.878 6.723 1.00 22.83 ATOM 29 CB GLN 4 6.091 31.714 5.934 1.00 22.83 ATOM 30 CG GLN 4 5.830 30.299 6.451 1.00 22.83 ATOM 31 CD GLN 4 5.118 29.454 5.401 1.00 22.83 ATOM 32 NE2 GLN 4 5.485 28.197 5.269 1.00 22.83 ATOM 33 OE1 GLN 4 4.232 29.931 4.704 1.00 22.83 ATOM 35 N GLY 5 8.169 34.057 5.565 1.00 22.33 ATOM 36 CA GLY 5 8.556 35.396 5.320 1.00 22.33 ATOM 37 C GLY 5 7.649 35.890 4.198 1.00 22.33 ATOM 38 O GLY 5 6.822 35.133 3.696 1.00 22.33 ATOM 39 N PRO 6 7.820 37.215 3.786 1.00 21.17 ATOM 40 CA PRO 6 6.820 37.770 2.942 1.00 21.17 ATOM 41 C PRO 6 6.535 37.065 1.575 1.00 21.17 ATOM 42 O PRO 6 7.467 36.744 0.842 1.00 21.17 ATOM 43 CB PRO 6 7.377 39.180 2.733 1.00 21.17 ATOM 44 CG PRO 6 8.159 39.493 3.990 1.00 21.17 ATOM 45 CD PRO 6 8.833 38.199 4.408 1.00 21.17 ATOM 47 N TRP 7 5.327 36.850 1.263 1.00 20.14 ATOM 48 CA TRP 7 4.737 36.285 0.067 1.00 20.14 ATOM 49 C TRP 7 4.248 37.473 -0.588 1.00 20.14 ATOM 50 O TRP 7 3.419 38.187 -0.029 1.00 20.14 ATOM 51 CB TRP 7 3.585 35.304 0.300 1.00 20.14 ATOM 52 CG TRP 7 4.012 34.121 1.124 1.00 20.14 ATOM 53 CD1 TRP 7 4.135 34.094 2.474 1.00 20.14 ATOM 54 CD2 TRP 7 4.368 32.809 0.657 1.00 20.14 ATOM 55 NE1 TRP 7 4.547 32.842 2.870 1.00 20.14 ATOM 56 CE2 TRP 7 4.700 32.022 1.775 1.00 20.14 ATOM 57 CE3 TRP 7 4.432 32.234 -0.617 1.00 20.14 ATOM 58 CZ2 TRP 7 5.090 30.692 1.647 1.00 20.14 ATOM 59 CZ3 TRP 7 4.823 30.902 -0.746 1.00 20.14 ATOM 60 CH2 TRP 7 5.149 30.136 0.377 1.00 20.14 ATOM 62 N VAL 8 4.744 37.771 -1.864 1.00 19.81 ATOM 63 CA VAL 8 4.341 38.947 -2.578 1.00 19.81 ATOM 64 C VAL 8 2.857 38.860 -2.871 1.00 19.81 ATOM 65 O VAL 8 2.137 39.840 -2.698 1.00 19.81 ATOM 66 CB VAL 8 5.132 39.120 -3.894 1.00 19.81 ATOM 67 CG1 VAL 8 4.540 40.255 -4.729 1.00 19.81 ATOM 68 CG2 VAL 8 6.594 39.449 -3.596 1.00 19.81 ATOM 70 N GLY 9 2.483 37.599 -3.316 1.00 20.59 ATOM 71 CA GLY 9 1.089 37.476 -3.790 1.00 20.59 ATOM 72 C GLY 9 1.069 36.211 -4.640 1.00 20.59 ATOM 73 O GLY 9 1.548 36.221 -5.772 1.00 20.59 ATOM 75 N SER 10 0.532 35.194 -4.112 1.00 19.40 ATOM 76 CA SER 10 -0.013 34.182 -5.055 1.00 19.40 ATOM 77 C SER 10 -1.259 33.845 -4.449 1.00 19.40 ATOM 78 O SER 10 -1.290 33.086 -3.483 1.00 19.40 ATOM 79 CB SER 10 0.844 32.924 -5.216 1.00 19.40 ATOM 80 OG SER 10 0.959 32.252 -3.970 1.00 19.40 ATOM 82 N SER 11 -2.348 34.449 -5.066 1.00 17.82 ATOM 83 CA SER 11 -3.673 34.455 -4.654 1.00 17.82 ATOM 84 C SER 11 -3.541 35.095 -3.234 1.00 17.82 ATOM 85 O SER 11 -3.086 36.230 -3.108 1.00 17.82 ATOM 86 CB SER 11 -4.335 33.079 -4.546 1.00 17.82 ATOM 87 OG SER 11 -5.647 33.211 -4.020 1.00 17.82 ATOM 89 N TYR 12 -3.947 34.292 -2.332 1.00 14.99 ATOM 90 CA TYR 12 -3.540 34.296 -1.012 1.00 14.99 ATOM 91 C TYR 12 -2.751 33.137 -0.488 1.00 14.99 ATOM 92 O TYR 12 -2.578 32.143 -1.189 1.00 14.99 ATOM 93 CB TYR 12 -4.815 34.477 -0.180 1.00 14.99 ATOM 94 CG TYR 12 -5.766 33.307 -0.327 1.00 14.99 ATOM 95 CD1 TYR 12 -5.585 32.148 0.430 1.00 14.99 ATOM 96 CD2 TYR 12 -6.834 33.377 -1.222 1.00 14.99 ATOM 97 CE1 TYR 12 -6.462 31.070 0.293 1.00 14.99 ATOM 98 CE2 TYR 12 -7.713 32.300 -1.359 1.00 14.99 ATOM 99 CZ TYR 12 -7.524 31.150 -0.601 1.00 14.99 ATOM 100 OH TYR 12 -8.387 30.091 -0.736 1.00 14.99 ATOM 102 N VAL 13 -2.249 33.258 0.813 1.00 13.33 ATOM 103 CA VAL 13 -1.017 32.590 1.076 1.00 13.33 ATOM 104 C VAL 13 -1.423 31.059 1.104 1.00 13.33 ATOM 105 O VAL 13 -2.340 30.676 1.828 1.00 13.33 ATOM 106 CB VAL 13 -0.343 32.985 2.409 1.00 13.33 ATOM 107 CG1 VAL 13 0.971 32.225 2.591 1.00 13.33 ATOM 108 CG2 VAL 13 -0.043 34.482 2.430 1.00 13.33 ATOM 110 N ALA 14 -0.754 30.261 0.354 1.00 14.87 ATOM 111 CA ALA 14 -1.066 28.780 0.157 1.00 14.87 ATOM 112 C ALA 14 -1.057 28.076 1.509 1.00 14.87 ATOM 113 O ALA 14 -0.199 28.356 2.344 1.00 14.87 ATOM 114 CB ALA 14 -0.059 28.131 -0.784 1.00 14.87 ATOM 116 N GLU 15 -1.980 27.147 1.784 1.00 12.16 ATOM 117 CA GLU 15 -2.912 27.360 2.983 1.00 12.16 ATOM 118 C GLU 15 -2.070 27.317 4.253 1.00 12.16 ATOM 119 O GLU 15 -2.440 27.916 5.260 1.00 12.16 ATOM 120 CB GLU 15 -4.015 26.300 3.045 1.00 12.16 ATOM 121 CG GLU 15 -5.008 26.457 1.894 1.00 12.16 ATOM 122 CD GLU 15 -6.089 25.383 1.955 1.00 12.16 ATOM 123 OE1 GLU 15 -6.999 25.426 1.123 1.00 12.16 ATOM 124 OE2 GLU 15 -5.999 24.523 2.839 1.00 12.16 ATOM 126 N THR 16 -0.977 26.627 4.176 1.00 11.55 ATOM 127 CA THR 16 -0.134 26.549 5.370 1.00 11.55 ATOM 128 C THR 16 0.319 27.938 5.692 1.00 11.55 ATOM 129 O THR 16 0.338 28.325 6.858 1.00 11.55 ATOM 130 CB THR 16 1.093 25.637 5.172 1.00 11.55 ATOM 131 OG1 THR 16 0.650 24.321 4.871 1.00 11.55 ATOM 132 CG2 THR 16 1.956 25.588 6.431 1.00 11.55 ATOM 134 N GLY 17 0.704 28.793 4.738 1.00 10.30 ATOM 135 CA GLY 17 1.143 30.130 4.945 1.00 10.30 ATOM 136 C GLY 17 0.091 31.008 5.488 1.00 10.30 ATOM 137 O GLY 17 0.374 31.862 6.325 1.00 10.30 ATOM 139 N GLN 18 -1.081 30.741 4.980 1.00 10.85 ATOM 140 CA GLN 18 -2.203 31.452 5.462 1.00 10.85 ATOM 141 C GLN 18 -2.448 31.214 6.891 1.00 10.85 ATOM 142 O GLN 18 -2.748 32.150 7.630 1.00 10.85 ATOM 143 CB GLN 18 -3.441 31.071 4.647 1.00 10.85 ATOM 144 CG GLN 18 -4.671 31.867 5.086 1.00 10.85 ATOM 145 CD GLN 18 -5.889 31.504 4.245 1.00 10.85 ATOM 146 NE2 GLN 18 -6.667 32.483 3.834 1.00 10.85 ATOM 147 OE1 GLN 18 -6.133 30.340 3.961 1.00 10.85 ATOM 149 N ASN 19 -2.299 29.882 7.273 1.00 10.33 ATOM 150 CA ASN 19 -2.483 29.562 8.642 1.00 10.33 ATOM 151 C ASN 19 -1.439 30.249 9.522 1.00 10.33 ATOM 152 O ASN 19 -1.758 30.702 10.618 1.00 10.33 ATOM 153 CB ASN 19 -2.430 28.046 8.847 1.00 10.33 ATOM 154 CG ASN 19 -3.686 27.370 8.307 1.00 10.33 ATOM 155 ND2 ASN 19 -3.589 26.115 7.922 1.00 10.33 ATOM 156 OD1 ASN 19 -4.746 27.977 8.236 1.00 10.33 ATOM 158 N TRP 20 -0.151 30.353 9.060 1.00 7.81 ATOM 159 CA TRP 20 0.947 31.084 9.825 1.00 7.81 ATOM 160 C TRP 20 0.598 32.467 9.985 1.00 7.81 ATOM 161 O TRP 20 0.858 33.050 11.034 1.00 7.81 ATOM 162 CB TRP 20 2.292 30.962 9.104 1.00 7.81 ATOM 163 CG TRP 20 2.879 29.584 9.237 1.00 7.81 ATOM 164 CD1 TRP 20 2.990 28.666 8.246 1.00 7.81 ATOM 165 CD2 TRP 20 3.429 28.976 10.417 1.00 7.81 ATOM 166 NE1 TRP 20 3.576 27.525 8.744 1.00 7.81 ATOM 167 CE2 TRP 20 3.861 27.679 10.081 1.00 7.81 ATOM 168 CE3 TRP 20 3.592 29.422 11.735 1.00 7.81 ATOM 169 CZ2 TRP 20 4.444 26.832 11.020 1.00 7.81 ATOM 170 CZ3 TRP 20 4.175 28.574 12.675 1.00 7.81 ATOM 171 CH2 TRP 20 4.598 27.289 12.322 1.00 7.81 ATOM 173 N ALA 21 -0.027 33.095 8.950 1.00 7.84 ATOM 174 CA ALA 21 -0.486 34.453 9.071 1.00 7.84 ATOM 175 C ALA 21 -1.514 34.575 10.202 1.00 7.84 ATOM 176 O ALA 21 -1.427 35.490 11.018 1.00 7.84 ATOM 177 CB ALA 21 -1.087 34.929 7.755 1.00 7.84 ATOM 179 N SER 22 -2.474 33.597 10.192 1.00 8.10 ATOM 180 CA SER 22 -3.378 33.591 11.248 1.00 8.10 ATOM 181 C SER 22 -2.726 33.328 12.603 1.00 8.10 ATOM 182 O SER 22 -3.067 33.981 13.587 1.00 8.10 ATOM 183 CB SER 22 -4.457 32.543 10.978 1.00 8.10 ATOM 184 OG SER 22 -5.374 32.495 12.062 1.00 8.10 ATOM 186 N LEU 23 -1.818 32.399 12.615 1.00 7.44 ATOM 187 CA LEU 23 -1.119 32.087 13.860 1.00 7.44 ATOM 188 C LEU 23 -0.278 33.238 14.353 1.00 7.44 ATOM 189 O LEU 23 -0.230 33.495 15.554 1.00 7.44 ATOM 190 CB LEU 23 -0.244 30.848 13.656 1.00 7.44 ATOM 191 CG LEU 23 -1.064 29.566 13.468 1.00 7.44 ATOM 192 CD1 LEU 23 -0.143 28.398 13.120 1.00 7.44 ATOM 193 CD2 LEU 23 -1.818 29.228 14.754 1.00 7.44 ATOM 195 N ALA 24 0.343 33.896 13.477 1.00 6.94 ATOM 196 CA ALA 24 1.072 35.053 13.787 1.00 6.94 ATOM 197 C ALA 24 0.272 36.090 14.369 1.00 6.94 ATOM 198 O ALA 24 0.667 36.685 15.370 1.00 6.94 ATOM 199 CB ALA 24 1.753 35.560 12.521 1.00 6.94 ATOM 201 N ALA 25 -0.865 36.301 13.739 1.00 7.66 ATOM 202 CA ALA 25 -1.745 37.279 14.263 1.00 7.66 ATOM 203 C ALA 25 -2.121 36.770 15.656 1.00 7.66 ATOM 204 O ALA 25 -2.134 37.542 16.612 1.00 7.66 ATOM 205 CB ALA 25 -2.997 37.476 13.418 1.00 7.66 ATOM 207 N ASN 26 -2.419 35.448 15.754 1.00 8.00 ATOM 208 CA ASN 26 -2.839 34.822 17.002 1.00 8.00 ATOM 209 C ASN 26 -1.509 34.594 17.726 1.00 8.00 ATOM 210 O ASN 26 -0.560 34.094 17.128 1.00 8.00 ATOM 211 CB ASN 26 -3.585 33.495 16.841 1.00 8.00 ATOM 212 CG ASN 26 -4.934 33.699 16.157 1.00 8.00 ATOM 213 ND2 ASN 26 -5.284 32.837 15.225 1.00 8.00 ATOM 214 OD1 ASN 26 -5.662 34.632 16.467 1.00 8.00 ATOM 216 N GLU 27 -1.482 34.954 18.972 1.00 7.60 ATOM 217 CA GLU 27 -0.267 34.816 19.769 1.00 7.60 ATOM 218 C GLU 27 0.934 35.560 19.040 1.00 7.60 ATOM 219 O GLU 27 2.086 35.159 19.185 1.00 7.60 ATOM 220 CB GLU 27 0.085 33.341 19.988 1.00 7.60 ATOM 221 CG GLU 27 -0.919 32.660 20.919 1.00 7.60 ATOM 222 CD GLU 27 -0.565 31.190 21.122 1.00 7.60 ATOM 223 OE1 GLU 27 0.435 30.748 20.550 1.00 7.60 ATOM 224 OE2 GLU 27 -1.302 30.515 21.850 1.00 7.60 ATOM 226 N LEU 28 0.762 36.670 18.232 1.00 6.65 ATOM 227 CA LEU 28 1.099 38.012 18.615 1.00 6.65 ATOM 228 C LEU 28 0.136 38.853 19.431 1.00 6.65 ATOM 229 O LEU 28 0.562 39.737 20.169 1.00 6.65 ATOM 230 CB LEU 28 1.429 38.721 17.300 1.00 6.65 ATOM 231 CG LEU 28 2.669 38.144 16.609 1.00 6.65 ATOM 232 CD1 LEU 28 2.888 38.827 15.260 1.00 6.65 ATOM 233 CD2 LEU 28 3.909 38.364 17.476 1.00 6.65 ATOM 235 N ARG 29 -1.174 38.499 19.239 1.00 7.47 ATOM 236 CA ARG 29 -2.190 39.022 20.039 1.00 7.47 ATOM 237 C ARG 29 -2.413 38.506 21.456 1.00 7.47 ATOM 238 O ARG 29 -2.631 39.296 22.371 1.00 7.47 ATOM 239 CB ARG 29 -3.467 38.853 19.212 1.00 7.47 ATOM 240 CG ARG 29 -3.487 39.793 18.007 1.00 7.47 ATOM 241 CD ARG 29 -4.640 39.443 17.067 1.00 7.47 ATOM 242 NE ARG 29 -4.635 40.359 15.907 1.00 7.47 ATOM 243 CZ ARG 29 -5.546 40.295 14.953 1.00 7.47 ATOM 244 NH1 ARG 29 -5.506 41.130 13.935 1.00 7.47 ATOM 245 NH2 ARG 29 -6.500 39.390 15.019 1.00 7.47 ATOM 247 N VAL 30 -2.342 37.195 21.587 1.00 8.27 ATOM 248 CA VAL 30 -2.589 36.615 22.972 1.00 8.27 ATOM 249 C VAL 30 -1.319 36.320 23.781 1.00 8.27 ATOM 250 O VAL 30 -1.405 35.914 24.938 1.00 8.27 ATOM 251 CB VAL 30 -3.436 35.332 22.828 1.00 8.27 ATOM 252 CG1 VAL 30 -3.636 34.665 24.188 1.00 8.27 ATOM 253 CG2 VAL 30 -4.808 35.663 22.243 1.00 8.27 ATOM 255 N THR 31 -0.173 36.533 23.167 1.00 7.20 ATOM 256 CA THR 31 1.008 36.521 24.110 1.00 7.20 ATOM 257 C THR 31 1.009 37.611 25.187 1.00 7.20 ATOM 258 O THR 31 1.364 37.344 26.333 1.00 7.20 ATOM 259 CB THR 31 2.296 36.619 23.272 1.00 7.20 ATOM 260 OG1 THR 31 2.261 37.814 22.502 1.00 7.20 ATOM 261 CG2 THR 31 2.434 35.430 22.324 1.00 7.20 ATOM 263 N GLU 32 0.619 38.826 24.866 1.00 8.12 ATOM 264 CA GLU 32 -0.183 39.715 25.596 1.00 8.12 ATOM 265 C GLU 32 0.582 39.839 26.866 1.00 8.12 ATOM 266 O GLU 32 -0.012 39.901 27.940 1.00 8.12 ATOM 267 CB GLU 32 -1.604 39.223 25.884 1.00 8.12 ATOM 268 CG GLU 32 -2.452 40.312 26.541 1.00 8.12 ATOM 269 CD GLU 32 -3.898 39.857 26.699 1.00 8.12 ATOM 270 OE1 GLU 32 -4.198 38.724 26.310 1.00 8.12 ATOM 271 OE2 GLU 32 -4.700 40.649 27.210 1.00 8.12 ATOM 273 N ARG 33 1.989 39.890 26.793 1.00 9.00 ATOM 274 CA ARG 33 3.016 39.582 27.864 1.00 9.00 ATOM 275 C ARG 33 3.061 40.845 28.722 1.00 9.00 ATOM 276 O ARG 33 2.690 41.920 28.258 1.00 9.00 ATOM 277 CB ARG 33 4.409 39.274 27.310 1.00 9.00 ATOM 278 CG ARG 33 4.403 38.022 26.433 1.00 9.00 ATOM 279 CD ARG 33 5.812 37.705 25.932 1.00 9.00 ATOM 280 NE ARG 33 5.792 36.457 25.140 1.00 9.00 ATOM 281 CZ ARG 33 6.891 35.924 24.635 1.00 9.00 ATOM 282 NH1 ARG 33 6.830 34.810 23.935 1.00 9.00 ATOM 283 NH2 ARG 33 8.052 36.511 24.832 1.00 9.00 ATOM 284 N PRO 34 3.551 40.592 29.984 1.00 10.00 ATOM 285 CA PRO 34 3.617 41.647 31.092 1.00 10.00 ATOM 286 C PRO 34 2.353 42.522 31.242 1.00 10.00 ATOM 287 O PRO 34 1.721 42.870 30.246 1.00 10.00 ATOM 288 CB PRO 34 4.823 42.487 30.665 1.00 10.00 ATOM 289 CG PRO 34 5.778 41.514 30.008 1.00 10.00 ATOM 290 CD PRO 34 5.669 40.215 30.787 1.00 10.00 ATOM 292 N PHE 35 2.062 42.841 32.579 1.00 12.03 ATOM 293 CA PHE 35 0.919 43.780 32.731 1.00 12.03 ATOM 294 C PHE 35 1.499 45.231 32.607 1.00 12.03 ATOM 295 O PHE 35 1.325 45.879 31.577 1.00 12.03 ATOM 296 CB PHE 35 0.202 43.615 34.075 1.00 12.03 ATOM 297 CG PHE 35 -1.204 44.173 34.041 1.00 12.03 ATOM 298 CD1 PHE 35 -2.282 43.344 33.745 1.00 12.03 ATOM 299 CD2 PHE 35 -1.428 45.521 34.309 1.00 12.03 ATOM 300 CE1 PHE 35 -3.577 43.859 33.714 1.00 12.03 ATOM 301 CE2 PHE 35 -2.724 46.037 34.279 1.00 12.03 ATOM 302 CZ PHE 35 -3.796 45.205 33.981 1.00 12.03 ATOM 304 N TRP 36 2.185 45.721 33.650 1.00 13.38 ATOM 305 CA TRP 36 3.229 46.666 33.680 1.00 13.38 ATOM 306 C TRP 36 2.902 48.192 33.514 1.00 13.38 ATOM 307 O TRP 36 1.789 48.545 33.132 1.00 13.38 ATOM 308 CB TRP 36 4.219 46.222 32.599 1.00 13.38 ATOM 309 CG TRP 36 5.546 46.915 32.733 1.00 13.38 ATOM 310 CD1 TRP 36 5.962 47.986 32.013 1.00 13.38 ATOM 311 CD2 TRP 36 6.619 46.588 33.633 1.00 13.38 ATOM 312 NE1 TRP 36 7.230 48.341 32.414 1.00 13.38 ATOM 313 CE2 TRP 36 7.668 47.501 33.412 1.00 13.38 ATOM 314 CE3 TRP 36 6.781 45.597 34.608 1.00 13.38 ATOM 315 CZ2 TRP 36 8.856 47.444 34.137 1.00 13.38 ATOM 316 CZ3 TRP 36 7.969 45.539 35.333 1.00 13.38 ATOM 317 CH2 TRP 36 8.999 46.456 35.101 1.00 13.38 ATOM 319 N ILE 37 3.841 49.229 33.777 1.00 14.55 ATOM 320 CA ILE 37 3.846 50.246 34.902 1.00 14.55 ATOM 321 C ILE 37 3.123 51.480 34.504 1.00 14.55 ATOM 322 O ILE 37 2.973 51.749 33.315 1.00 14.55 ATOM 323 CB ILE 37 5.293 50.588 35.325 1.00 14.55 ATOM 324 CG1 ILE 37 6.051 51.233 34.159 1.00 14.55 ATOM 325 CG2 ILE 37 6.036 49.320 35.748 1.00 14.55 ATOM 326 CD1 ILE 37 7.368 51.849 34.619 1.00 14.55 ATOM 328 N SER 38 2.662 52.268 35.529 1.00 14.33 ATOM 329 CA SER 38 2.147 53.600 35.173 1.00 14.33 ATOM 330 C SER 38 2.708 54.638 35.972 1.00 14.33 ATOM 331 O SER 38 3.127 54.390 37.099 1.00 14.33 ATOM 332 CB SER 38 0.623 53.609 35.303 1.00 14.33 ATOM 333 OG SER 38 0.053 52.659 34.415 1.00 14.33 ATOM 335 N SER 39 2.750 55.790 35.495 1.00 12.45 ATOM 336 CA SER 39 2.983 56.992 36.274 1.00 12.45 ATOM 337 C SER 39 1.761 57.911 36.631 1.00 12.45 ATOM 338 O SER 39 1.806 58.639 37.620 1.00 12.45 ATOM 339 CB SER 39 4.034 57.797 35.508 1.00 12.45 ATOM 340 OG SER 39 3.536 58.155 34.228 1.00 12.45 ATOM 342 N PHE 40 0.726 57.831 35.813 1.00 12.62 ATOM 343 CA PHE 40 -0.491 58.628 35.834 1.00 12.62 ATOM 344 C PHE 40 -0.086 60.041 35.211 1.00 12.62 ATOM 345 O PHE 40 -0.712 60.495 34.256 1.00 12.62 ATOM 346 CB PHE 40 -1.061 58.822 37.243 1.00 12.62 ATOM 347 CG PHE 40 -1.600 57.532 37.819 1.00 12.62 ATOM 348 CD1 PHE 40 -0.812 56.757 38.668 1.00 12.62 ATOM 349 CD2 PHE 40 -2.889 57.109 37.505 1.00 12.62 ATOM 350 CE1 PHE 40 -1.310 55.569 39.199 1.00 12.62 ATOM 351 CE2 PHE 40 -3.388 55.920 38.037 1.00 12.62 ATOM 352 CZ PHE 40 -2.597 55.152 38.882 1.00 12.62 ATOM 354 N ILE 41 0.984 60.814 35.706 1.00 10.91 ATOM 355 CA ILE 41 1.421 61.776 34.816 1.00 10.91 ATOM 356 C ILE 41 2.931 61.594 34.622 1.00 10.91 ATOM 357 O ILE 41 3.722 62.264 35.282 1.00 10.91 ATOM 358 CB ILE 41 1.117 63.210 35.306 1.00 10.91 ATOM 359 CG1 ILE 41 -0.396 63.422 35.431 1.00 10.91 ATOM 360 CG2 ILE 41 1.674 64.239 34.320 1.00 10.91 ATOM 361 CD1 ILE 41 -0.723 64.738 36.130 1.00 10.91 ATOM 363 N GLY 42 3.348 60.755 33.776 1.00 9.28 ATOM 364 CA GLY 42 4.468 60.904 32.776 1.00 9.28 ATOM 365 C GLY 42 3.958 61.342 31.431 1.00 9.28 ATOM 366 O GLY 42 4.741 61.496 30.496 1.00 9.28 ATOM 368 N ARG 43 2.639 61.532 31.398 1.00 9.59 ATOM 369 CA ARG 43 1.804 61.058 30.364 1.00 9.59 ATOM 370 C ARG 43 1.599 61.981 29.248 1.00 9.59 ATOM 371 O ARG 43 1.146 61.570 28.183 1.00 9.59 ATOM 372 CB ARG 43 0.458 60.676 30.984 1.00 9.59 ATOM 373 CG ARG 43 -0.489 60.071 29.948 1.00 9.59 ATOM 374 CD ARG 43 -1.761 59.552 30.615 1.00 9.59 ATOM 375 NE ARG 43 -2.665 58.983 29.594 1.00 9.59 ATOM 376 CZ ARG 43 -2.481 57.780 29.078 1.00 9.59 ATOM 377 NH1 ARG 43 -3.312 57.310 28.169 1.00 9.59 ATOM 378 NH2 ARG 43 -1.461 57.048 29.474 1.00 9.59 ATOM 380 N SER 44 1.888 63.264 29.329 1.00 8.00 ATOM 381 CA SER 44 1.524 64.242 28.361 1.00 8.00 ATOM 382 C SER 44 2.550 64.757 27.365 1.00 8.00 ATOM 383 O SER 44 2.182 65.345 26.350 1.00 8.00 ATOM 384 CB SER 44 0.951 65.410 29.167 1.00 8.00 ATOM 385 OG SER 44 1.960 65.977 29.989 1.00 8.00 ATOM 387 N LYS 45 3.839 64.489 27.722 1.00 8.87 ATOM 388 CA LYS 45 4.849 65.321 27.186 1.00 8.87 ATOM 389 C LYS 45 6.106 64.501 26.735 1.00 8.87 ATOM 390 O LYS 45 6.389 63.446 27.298 1.00 8.87 ATOM 391 CB LYS 45 5.250 66.379 28.218 1.00 8.87 ATOM 392 CG LYS 45 5.865 65.744 29.465 1.00 8.87 ATOM 393 CD LYS 45 6.369 66.820 30.428 1.00 8.87 ATOM 394 CE LYS 45 6.994 66.183 31.668 1.00 8.87 ATOM 395 NZ LYS 45 7.509 67.242 32.577 1.00 8.87 TER END