####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS192_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS192_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 3 - 40 4.87 8.07 LCS_AVERAGE: 84.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 19 - 37 1.85 9.11 LCS_AVERAGE: 34.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 0.96 8.17 LCS_AVERAGE: 20.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 37 3 3 3 6 6 8 11 12 13 15 17 17 20 25 26 28 31 33 38 38 LCS_GDT V 3 V 3 3 7 38 3 3 4 6 8 9 12 16 18 21 25 29 30 35 36 36 37 38 38 39 LCS_GDT Q 4 Q 4 5 7 38 3 4 5 6 8 9 13 16 23 25 27 29 33 35 36 36 37 38 38 39 LCS_GDT G 5 G 5 5 7 38 2 4 5 8 12 15 19 24 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 6 P 6 5 13 38 3 4 5 5 8 12 18 24 26 27 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 7 W 7 12 17 38 3 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 8 V 8 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 9 G 9 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 10 S 10 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 11 S 11 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Y 12 Y 12 12 17 38 6 11 12 13 16 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 13 V 13 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 14 A 14 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 15 E 15 12 17 38 3 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 16 T 16 12 17 38 6 11 12 13 15 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT G 17 G 17 12 17 38 6 11 12 13 15 17 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT Q 18 Q 18 12 17 38 3 3 12 13 14 17 19 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 19 N 19 13 19 38 6 12 12 14 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 20 W 20 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 21 A 21 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT S 22 S 22 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 23 L 23 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 24 A 24 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT A 25 A 25 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT N 26 N 26 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 27 E 27 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT L 28 L 28 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 29 R 29 13 19 38 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT V 30 V 30 13 19 38 5 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT T 31 T 31 13 19 38 3 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT E 32 E 32 6 19 38 4 6 6 10 13 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT R 33 R 33 6 19 38 4 7 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT P 34 P 34 6 19 38 4 7 8 13 17 18 20 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT F 35 F 35 6 19 38 4 6 11 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 LCS_GDT W 36 W 36 6 19 38 4 6 11 14 17 18 20 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT I 37 I 37 6 19 38 4 6 10 15 16 18 21 24 26 27 30 33 33 35 36 36 37 38 38 39 LCS_GDT S 38 S 38 5 9 38 4 4 6 7 10 14 20 22 24 27 29 30 31 34 36 36 37 38 38 39 LCS_GDT S 39 S 39 5 9 38 4 4 6 7 9 12 17 21 23 27 29 30 30 31 32 36 37 38 38 39 LCS_GDT F 40 F 40 5 9 38 4 4 6 7 9 12 14 20 23 27 29 30 30 31 32 34 37 38 38 39 LCS_GDT I 41 I 41 5 9 36 4 4 6 7 9 12 14 18 20 24 27 28 30 30 31 31 32 32 33 39 LCS_GDT G 42 G 42 4 9 34 3 4 4 6 9 10 12 13 17 18 22 24 27 28 31 31 32 32 33 33 LCS_GDT R 43 R 43 4 9 34 3 4 6 7 9 10 12 13 17 18 20 24 25 27 30 31 32 32 33 33 LCS_GDT S 44 S 44 3 9 33 3 3 4 4 9 10 12 13 15 15 17 20 23 26 27 29 32 32 33 33 LCS_GDT K 45 K 45 3 3 15 2 3 3 3 3 7 7 8 10 12 13 14 15 19 20 21 22 25 27 27 LCS_AVERAGE LCS_A: 46.59 ( 20.87 34.56 84.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 15 17 18 21 24 26 29 31 33 33 35 36 36 37 38 38 39 GDT PERCENT_AT 18.18 27.27 27.27 34.09 38.64 40.91 47.73 54.55 59.09 65.91 70.45 75.00 75.00 79.55 81.82 81.82 84.09 86.36 86.36 88.64 GDT RMS_LOCAL 0.28 0.55 0.55 1.34 1.46 1.60 2.32 2.62 2.85 3.40 3.64 3.83 3.83 4.19 4.41 4.41 4.66 4.87 4.87 5.26 GDT RMS_ALL_AT 7.98 8.02 8.02 8.97 9.34 9.16 7.99 8.20 8.19 8.69 8.61 8.47 8.47 8.46 8.31 8.31 8.18 8.07 8.07 7.93 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.759 0 0.640 0.604 17.359 0.000 0.000 - LGA V 3 V 3 11.009 0 0.124 1.071 12.151 0.000 0.000 8.337 LGA Q 4 Q 4 12.387 0 0.674 1.014 15.542 0.000 0.000 15.542 LGA G 5 G 5 10.497 0 0.037 0.037 10.989 0.000 0.000 - LGA P 6 P 6 9.050 0 0.088 0.424 12.279 0.000 0.000 11.736 LGA W 7 W 7 9.922 0 0.433 1.225 21.131 0.000 0.000 21.131 LGA V 8 V 8 8.645 0 0.122 0.175 9.685 0.000 0.000 8.608 LGA G 9 G 9 7.837 0 0.062 0.062 8.494 0.000 0.000 - LGA S 10 S 10 7.652 0 0.095 0.592 9.271 0.000 0.000 9.026 LGA S 11 S 11 4.763 0 0.008 0.682 6.031 14.545 10.000 4.692 LGA Y 12 Y 12 2.880 0 0.120 1.100 7.917 31.818 12.727 7.917 LGA V 13 V 13 3.425 0 0.061 1.007 7.520 13.182 10.390 7.520 LGA A 14 A 14 4.371 0 0.017 0.020 5.040 6.818 6.545 - LGA E 15 E 15 3.170 0 0.060 1.125 5.309 15.455 14.545 3.521 LGA T 16 T 16 4.092 0 0.108 1.149 6.013 5.909 12.208 2.233 LGA G 17 G 17 6.226 0 0.712 0.712 6.226 0.000 0.000 - LGA Q 18 Q 18 5.468 0 0.030 1.313 12.253 16.364 7.273 12.107 LGA N 19 N 19 1.737 0 0.658 1.526 7.770 47.727 24.545 7.770 LGA W 20 W 20 1.497 0 0.075 1.027 6.882 54.545 39.870 6.080 LGA A 21 A 21 2.425 0 0.040 0.046 3.014 38.182 34.182 - LGA S 22 S 22 2.250 0 0.103 0.141 2.400 41.364 40.303 2.374 LGA L 23 L 23 0.900 0 0.077 0.106 1.752 69.545 72.045 1.181 LGA A 24 A 24 1.586 0 0.030 0.029 1.997 54.545 53.818 - LGA A 25 A 25 2.242 0 0.022 0.024 2.502 38.182 36.000 - LGA N 26 N 26 1.599 0 0.059 0.091 2.299 58.182 52.955 2.299 LGA E 27 E 27 1.135 0 0.071 0.990 3.405 65.455 52.525 3.405 LGA L 28 L 28 1.152 0 0.073 0.141 1.621 65.455 63.636 1.621 LGA R 29 R 29 1.162 0 0.079 1.403 8.324 65.455 38.182 8.324 LGA V 30 V 30 1.325 0 0.252 1.158 3.603 65.909 51.948 3.603 LGA T 31 T 31 1.403 0 0.696 0.676 4.408 52.273 34.026 4.403 LGA E 32 E 32 3.844 0 0.588 1.259 11.031 25.909 11.515 11.031 LGA R 33 R 33 2.511 0 0.063 1.344 12.069 22.727 9.256 12.069 LGA P 34 P 34 3.667 0 0.088 0.393 6.696 13.636 8.052 6.696 LGA F 35 F 35 2.508 0 0.099 1.230 3.433 32.727 29.752 3.058 LGA W 36 W 36 3.753 0 0.653 1.274 14.435 14.545 4.156 14.162 LGA I 37 I 37 3.017 0 0.071 0.951 5.714 12.727 14.545 2.981 LGA S 38 S 38 6.765 0 0.120 0.653 9.018 0.455 0.303 8.142 LGA S 39 S 39 7.411 0 0.180 0.720 10.556 0.000 0.000 6.814 LGA F 40 F 40 7.844 0 0.119 1.086 11.078 0.000 0.000 9.535 LGA I 41 I 41 11.838 0 0.565 0.573 15.008 0.000 0.000 11.955 LGA G 42 G 42 16.496 0 0.150 0.150 19.214 0.000 0.000 - LGA R 43 R 43 16.486 0 0.650 1.300 17.098 0.000 0.000 16.601 LGA S 44 S 44 18.591 0 0.714 0.811 21.643 0.000 0.000 17.316 LGA K 45 K 45 22.456 0 0.149 0.350 25.049 0.000 0.000 20.950 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.589 7.767 8.625 21.446 16.939 9.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.62 49.432 46.887 0.882 LGA_LOCAL RMSD: 2.620 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.203 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.589 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.810433 * X + -0.540611 * Y + -0.225697 * Z + 9.025166 Y_new = 0.527463 * X + -0.505722 * Y + -0.682662 * Z + 104.321968 Z_new = 0.254915 * X + -0.672298 * Y + 0.695006 * Z + -82.138824 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.564626 -0.257760 -0.768792 [DEG: 146.9422 -14.7685 -44.0485 ] ZXZ: -0.319300 0.802368 2.779172 [DEG: -18.2945 45.9723 159.2348 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS192_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS192_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.62 46.887 7.59 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS192_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 526 N ALA 2 -2.402 45.511 12.338 1.00 3.89 N ATOM 527 CA ALA 2 -2.718 44.779 13.558 1.00 3.89 C ATOM 528 C ALA 2 -1.439 44.476 14.319 1.00 3.89 C ATOM 529 O ALA 2 -1.427 44.387 15.552 1.00 3.89 O ATOM 530 CB ALA 2 -3.404 43.478 13.238 1.00 5.83 C ATOM 531 N VAL 3 -0.374 44.309 13.533 1.00 3.89 N ATOM 532 CA VAL 3 0.976 43.960 13.921 1.00 3.89 C ATOM 533 C VAL 3 1.923 45.152 13.745 1.00 3.89 C ATOM 534 O VAL 3 1.588 46.151 13.090 1.00 3.89 O ATOM 535 CB VAL 3 1.500 42.843 13.000 1.00 5.83 C ATOM 536 CG1 VAL 3 0.696 41.581 13.086 1.00 5.83 C ATOM 537 CG2 VAL 3 1.423 43.340 11.574 1.00 5.83 C ATOM 538 N GLN 4 3.134 45.030 14.308 1.00 3.89 N ATOM 539 CA GLN 4 4.173 46.067 14.198 1.00 3.89 C ATOM 540 C GLN 4 4.543 46.332 12.731 1.00 3.68 C ATOM 541 O GLN 4 5.040 47.400 12.380 1.00 3.89 O ATOM 542 CB GLN 4 5.413 45.646 14.978 1.00 5.83 C ATOM 543 CG GLN 4 5.187 45.478 16.472 1.00 5.83 C ATOM 544 CD GLN 4 4.576 44.102 16.826 1.00 5.83 C ATOM 545 NE2 GLN 4 4.966 43.557 17.972 1.00 5.83 N ATOM 546 OE1 GLN 4 3.773 43.544 16.076 1.00 5.83 O ATOM 547 N GLY 5 4.300 45.338 11.885 1.00 3.21 N ATOM 548 CA GLY 5 4.527 45.426 10.456 1.00 2.75 C ATOM 549 C GLY 5 4.423 44.052 9.778 1.00 1.96 C ATOM 550 O GLY 5 4.436 43.012 10.449 1.00 2.06 O ATOM 551 N PRO 6 4.373 44.007 8.435 1.00 1.39 N ATOM 552 CA PRO 6 4.327 42.803 7.617 1.00 0.97 C ATOM 553 C PRO 6 5.436 41.827 7.996 1.00 0.94 C ATOM 554 O PRO 6 5.263 40.615 7.858 1.00 1.04 O ATOM 555 CB PRO 6 4.561 43.366 6.213 1.00 1.46 C ATOM 556 CG PRO 6 3.958 44.754 6.277 1.00 1.46 C ATOM 557 CD PRO 6 4.313 45.263 7.656 1.00 1.46 C ATOM 558 N TRP 7 6.573 42.351 8.469 1.00 1.03 N ATOM 559 CA TRP 7 7.710 41.544 8.900 1.00 1.12 C ATOM 560 C TRP 7 7.380 40.626 10.079 1.00 0.99 C ATOM 561 O TRP 7 7.978 39.553 10.239 1.00 1.02 O ATOM 562 CB TRP 7 8.879 42.461 9.271 1.00 1.68 C ATOM 563 CG TRP 7 8.613 43.361 10.455 1.00 1.68 C ATOM 564 CD1 TRP 7 8.138 44.635 10.407 1.00 1.68 C ATOM 565 CD2 TRP 7 8.821 43.065 11.858 1.00 1.68 C ATOM 566 CE2 TRP 7 8.456 44.207 12.575 1.00 1.68 C ATOM 567 CE3 TRP 7 9.283 41.938 12.552 1.00 1.68 C ATOM 568 NE1 TRP 7 8.043 45.157 11.677 1.00 1.68 N ATOM 569 CZ2 TRP 7 8.539 44.261 13.957 1.00 1.68 C ATOM 570 CZ3 TRP 7 9.359 41.989 13.937 1.00 1.68 C ATOM 571 CH2 TRP 7 8.996 43.127 14.621 1.00 1.68 C ATOM 572 N VAL 8 6.392 41.029 10.887 1.00 0.94 N ATOM 573 CA VAL 8 5.981 40.256 12.046 1.00 0.88 C ATOM 574 C VAL 8 5.281 39.052 11.509 1.00 0.85 C ATOM 575 O VAL 8 5.538 37.904 11.889 1.00 0.90 O ATOM 576 CB VAL 8 4.957 41.033 12.888 1.00 1.32 C ATOM 577 CG1 VAL 8 4.439 40.175 14.012 1.00 1.32 C ATOM 578 CG2 VAL 8 5.552 42.274 13.393 1.00 1.32 C ATOM 579 N GLY 9 4.394 39.358 10.579 1.00 0.84 N ATOM 580 CA GLY 9 3.582 38.377 9.903 1.00 0.92 C ATOM 581 C GLY 9 4.418 37.374 9.140 1.00 0.91 C ATOM 582 O GLY 9 4.246 36.161 9.284 1.00 0.88 O ATOM 583 N SER 10 5.341 37.901 8.338 1.00 1.01 N ATOM 584 CA SER 10 6.214 37.105 7.501 1.00 1.12 C ATOM 585 C SER 10 7.054 36.162 8.348 1.00 1.05 C ATOM 586 O SER 10 7.210 34.987 8.013 1.00 1.09 O ATOM 587 CB SER 10 7.132 38.029 6.724 1.00 1.68 C ATOM 588 OG SER 10 6.400 38.844 5.841 1.00 1.68 O ATOM 589 N SER 11 7.563 36.653 9.479 1.00 1.01 N ATOM 590 CA SER 11 8.357 35.805 10.342 1.00 1.01 C ATOM 591 C SER 11 7.487 34.690 10.927 1.00 0.88 C ATOM 592 O SER 11 7.878 33.517 10.954 1.00 0.93 O ATOM 593 CB SER 11 8.937 36.632 11.474 1.00 1.52 C ATOM 594 OG SER 11 9.823 37.608 10.987 1.00 1.52 O ATOM 595 N TYR 12 6.270 35.045 11.350 1.00 0.77 N ATOM 596 CA TYR 12 5.368 34.081 11.957 1.00 0.69 C ATOM 597 C TYR 12 5.107 32.917 11.032 1.00 0.69 C ATOM 598 O TYR 12 5.319 31.756 11.403 1.00 0.70 O ATOM 599 CB TYR 12 4.035 34.746 12.302 1.00 1.03 C ATOM 600 CG TYR 12 3.023 33.824 12.924 1.00 1.03 C ATOM 601 CD1 TYR 12 3.127 33.506 14.258 1.00 1.03 C ATOM 602 CD2 TYR 12 1.993 33.296 12.170 1.00 1.03 C ATOM 603 CE1 TYR 12 2.221 32.686 14.843 1.00 1.03 C ATOM 604 CE2 TYR 12 1.084 32.461 12.769 1.00 1.03 C ATOM 605 CZ TYR 12 1.196 32.154 14.104 1.00 1.03 C ATOM 606 OH TYR 12 0.282 31.305 14.705 1.00 1.03 O ATOM 607 N VAL 13 4.676 33.237 9.818 1.00 0.81 N ATOM 608 CA VAL 13 4.335 32.235 8.826 1.00 0.92 C ATOM 609 C VAL 13 5.547 31.452 8.337 1.00 1.02 C ATOM 610 O VAL 13 5.451 30.247 8.092 1.00 1.06 O ATOM 611 CB VAL 13 3.571 32.913 7.684 1.00 1.38 C ATOM 612 CG1 VAL 13 4.437 33.774 6.926 1.00 1.38 C ATOM 613 CG2 VAL 13 2.936 31.880 6.780 1.00 1.38 C ATOM 614 N ALA 14 6.721 32.093 8.276 1.00 1.09 N ATOM 615 CA ALA 14 7.927 31.400 7.845 1.00 1.25 C ATOM 616 C ALA 14 8.228 30.202 8.741 1.00 1.21 C ATOM 617 O ALA 14 8.682 29.161 8.254 1.00 1.35 O ATOM 618 CB ALA 14 9.107 32.358 7.855 1.00 1.88 C ATOM 619 N GLU 15 7.959 30.333 10.043 1.00 1.07 N ATOM 620 CA GLU 15 8.190 29.223 10.968 1.00 1.11 C ATOM 621 C GLU 15 6.924 28.383 11.230 1.00 1.06 C ATOM 622 O GLU 15 7.019 27.195 11.548 1.00 1.17 O ATOM 623 CB GLU 15 8.755 29.731 12.299 1.00 1.67 C ATOM 624 CG GLU 15 10.125 30.404 12.198 1.00 1.67 C ATOM 625 CD GLU 15 10.683 30.846 13.545 1.00 1.67 C ATOM 626 OE1 GLU 15 9.992 30.724 14.532 1.00 1.67 O ATOM 627 OE2 GLU 15 11.807 31.292 13.580 1.00 1.67 O ATOM 628 N THR 16 5.750 29.008 11.111 1.00 0.93 N ATOM 629 CA THR 16 4.462 28.381 11.418 1.00 0.94 C ATOM 630 C THR 16 3.837 27.568 10.289 1.00 0.99 C ATOM 631 O THR 16 3.235 26.523 10.539 1.00 1.07 O ATOM 632 CB THR 16 3.432 29.441 11.839 1.00 1.41 C ATOM 633 CG2 THR 16 2.107 28.784 12.190 1.00 1.41 C ATOM 634 OG1 THR 16 3.931 30.149 12.967 1.00 1.41 O ATOM 635 N GLY 17 3.914 28.066 9.058 1.00 1.02 N ATOM 636 CA GLY 17 3.202 27.438 7.966 1.00 1.16 C ATOM 637 C GLY 17 1.767 27.933 8.008 1.00 1.19 C ATOM 638 O GLY 17 1.507 29.011 8.554 1.00 1.25 O ATOM 639 N GLN 18 0.845 27.173 7.420 1.00 1.43 N ATOM 640 CA GLN 18 -0.539 27.614 7.332 1.00 1.74 C ATOM 641 C GLN 18 -1.143 27.765 8.723 1.00 1.55 C ATOM 642 O GLN 18 -0.860 26.986 9.635 1.00 2.07 O ATOM 643 CB GLN 18 -1.359 26.637 6.483 1.00 2.61 C ATOM 644 CG GLN 18 -0.971 26.644 5.011 1.00 2.61 C ATOM 645 CD GLN 18 -1.750 25.637 4.150 1.00 2.61 C ATOM 646 NE2 GLN 18 -2.842 25.092 4.674 1.00 2.61 N ATOM 647 OE1 GLN 18 -1.340 25.366 3.004 1.00 2.61 O ATOM 648 N ASN 19 -1.962 28.800 8.871 1.00 1.25 N ATOM 649 CA ASN 19 -2.610 29.123 10.132 1.00 1.15 C ATOM 650 C ASN 19 -3.849 29.954 9.873 1.00 1.39 C ATOM 651 O ASN 19 -3.911 30.643 8.863 1.00 1.75 O ATOM 652 CB ASN 19 -1.634 29.919 10.961 1.00 1.72 C ATOM 653 CG ASN 19 -1.307 31.233 10.257 1.00 1.72 C ATOM 654 ND2 ASN 19 -0.290 31.242 9.420 1.00 1.72 N ATOM 655 OD1 ASN 19 -1.993 32.237 10.456 1.00 1.72 O ATOM 656 N TRP 20 -4.800 29.980 10.794 1.00 1.74 N ATOM 657 CA TRP 20 -5.928 30.888 10.603 1.00 2.03 C ATOM 658 C TRP 20 -5.526 32.258 11.102 1.00 1.56 C ATOM 659 O TRP 20 -4.796 32.372 12.092 1.00 1.26 O ATOM 660 CB TRP 20 -7.174 30.431 11.328 1.00 3.04 C ATOM 661 CG TRP 20 -7.736 29.191 10.784 1.00 3.04 C ATOM 662 CD1 TRP 20 -7.608 28.711 9.514 1.00 3.04 C ATOM 663 CD2 TRP 20 -8.520 28.230 11.503 1.00 3.04 C ATOM 664 CE2 TRP 20 -8.830 27.207 10.608 1.00 3.04 C ATOM 665 CE3 TRP 20 -8.976 28.152 12.823 1.00 3.04 C ATOM 666 NE1 TRP 20 -8.267 27.519 9.398 1.00 3.04 N ATOM 667 CZ2 TRP 20 -9.580 26.111 10.987 1.00 3.04 C ATOM 668 CZ3 TRP 20 -9.722 27.052 13.206 1.00 3.04 C ATOM 669 CH2 TRP 20 -10.017 26.057 12.310 1.00 3.04 C ATOM 670 N ALA 21 -6.071 33.293 10.487 1.00 1.59 N ATOM 671 CA ALA 21 -5.732 34.658 10.855 1.00 1.27 C ATOM 672 C ALA 21 -6.001 34.975 12.321 1.00 1.08 C ATOM 673 O ALA 21 -5.194 35.646 12.976 1.00 0.92 O ATOM 674 CB ALA 21 -6.526 35.601 9.976 1.00 1.91 C ATOM 675 N SER 22 -7.097 34.455 12.866 1.00 1.34 N ATOM 676 CA SER 22 -7.422 34.734 14.258 1.00 1.41 C ATOM 677 C SER 22 -6.508 33.958 15.219 1.00 1.25 C ATOM 678 O SER 22 -6.342 34.321 16.388 1.00 1.45 O ATOM 679 CB SER 22 -8.884 34.411 14.515 1.00 2.11 C ATOM 680 OG SER 22 -9.129 33.030 14.442 1.00 2.11 O ATOM 681 N LEU 23 -5.859 32.903 14.729 1.00 1.11 N ATOM 682 CA LEU 23 -4.989 32.139 15.597 1.00 1.02 C ATOM 683 C LEU 23 -3.692 32.892 15.676 1.00 0.91 C ATOM 684 O LEU 23 -3.118 33.056 16.758 1.00 0.88 O ATOM 685 CB LEU 23 -4.762 30.724 15.049 1.00 1.53 C ATOM 686 CG LEU 23 -5.996 29.814 15.020 1.00 1.53 C ATOM 687 CD1 LEU 23 -5.649 28.516 14.285 1.00 1.53 C ATOM 688 CD2 LEU 23 -6.438 29.520 16.431 1.00 1.53 C ATOM 689 N ALA 24 -3.258 33.403 14.519 1.00 1.02 N ATOM 690 CA ALA 24 -2.034 34.174 14.456 1.00 1.07 C ATOM 691 C ALA 24 -2.163 35.415 15.308 1.00 0.88 C ATOM 692 O ALA 24 -1.251 35.769 16.048 1.00 0.84 O ATOM 693 CB ALA 24 -1.724 34.563 13.030 1.00 1.60 C ATOM 694 N ALA 25 -3.335 36.066 15.264 1.00 0.87 N ATOM 695 CA ALA 25 -3.490 37.263 16.072 1.00 0.84 C ATOM 696 C ALA 25 -3.328 36.950 17.541 1.00 0.82 C ATOM 697 O ALA 25 -2.664 37.684 18.290 1.00 0.92 O ATOM 698 CB ALA 25 -4.845 37.903 15.857 1.00 1.26 C ATOM 699 N ASN 26 -3.856 35.817 17.978 1.00 0.83 N ATOM 700 CA ASN 26 -3.714 35.510 19.381 1.00 0.96 C ATOM 701 C ASN 26 -2.267 35.150 19.726 1.00 0.97 C ATOM 702 O ASN 26 -1.699 35.718 20.662 1.00 1.16 O ATOM 703 CB ASN 26 -4.675 34.399 19.758 1.00 1.44 C ATOM 704 CG ASN 26 -6.107 34.882 19.806 1.00 1.44 C ATOM 705 ND2 ASN 26 -7.034 33.962 19.723 1.00 1.44 N ATOM 706 OD1 ASN 26 -6.376 36.086 19.916 1.00 1.44 O ATOM 707 N GLU 27 -1.642 34.265 18.949 1.00 0.90 N ATOM 708 CA GLU 27 -0.277 33.842 19.266 1.00 1.04 C ATOM 709 C GLU 27 0.725 35.007 19.238 1.00 1.07 C ATOM 710 O GLU 27 1.613 35.100 20.087 1.00 1.26 O ATOM 711 CB GLU 27 0.179 32.701 18.350 1.00 1.56 C ATOM 712 CG GLU 27 1.544 32.116 18.734 1.00 1.56 C ATOM 713 CD GLU 27 1.916 30.857 17.985 1.00 1.56 C ATOM 714 OE1 GLU 27 1.160 30.433 17.135 1.00 1.56 O ATOM 715 OE2 GLU 27 2.959 30.323 18.262 1.00 1.56 O ATOM 716 N LEU 28 0.551 35.918 18.285 1.00 0.92 N ATOM 717 CA LEU 28 1.419 37.077 18.132 1.00 0.94 C ATOM 718 C LEU 28 1.113 38.214 19.103 1.00 1.04 C ATOM 719 O LEU 28 1.861 39.189 19.160 1.00 1.17 O ATOM 720 CB LEU 28 1.305 37.620 16.704 1.00 1.41 C ATOM 721 CG LEU 28 1.857 36.755 15.610 1.00 1.41 C ATOM 722 CD1 LEU 28 1.476 37.348 14.242 1.00 1.41 C ATOM 723 CD2 LEU 28 3.359 36.719 15.795 1.00 1.41 C ATOM 724 N ARG 29 0.024 38.093 19.877 1.00 1.06 N ATOM 725 CA ARG 29 -0.418 39.143 20.786 1.00 1.26 C ATOM 726 C ARG 29 -0.672 40.465 20.045 1.00 1.29 C ATOM 727 O ARG 29 -0.237 41.534 20.480 1.00 1.49 O ATOM 728 CB ARG 29 0.597 39.342 21.913 1.00 1.89 C ATOM 729 CG ARG 29 0.482 38.342 23.066 1.00 1.89 C ATOM 730 CD ARG 29 0.960 36.955 22.687 1.00 1.89 C ATOM 731 NE ARG 29 0.965 36.057 23.848 1.00 1.89 N ATOM 732 CZ ARG 29 1.262 34.728 23.843 1.00 1.89 C ATOM 733 NH1 ARG 29 1.586 34.089 22.736 1.00 1.89 N ATOM 734 NH2 ARG 29 1.219 34.058 24.982 1.00 1.89 N ATOM 735 N VAL 30 -1.395 40.372 18.918 1.00 1.13 N ATOM 736 CA VAL 30 -1.724 41.512 18.054 1.00 1.21 C ATOM 737 C VAL 30 -3.232 41.605 17.824 1.00 1.17 C ATOM 738 O VAL 30 -3.989 40.772 18.333 1.00 1.31 O ATOM 739 CB VAL 30 -0.955 41.399 16.731 1.00 1.81 C ATOM 740 CG1 VAL 30 0.553 41.428 17.022 1.00 1.81 C ATOM 741 CG2 VAL 30 -1.357 40.166 16.062 1.00 1.81 C ATOM 742 N THR 31 -3.698 42.660 17.155 1.00 1.42 N ATOM 743 CA THR 31 -5.143 42.793 16.960 1.00 1.56 C ATOM 744 C THR 31 -5.556 41.960 15.759 1.00 1.55 C ATOM 745 O THR 31 -4.730 41.289 15.144 1.00 2.11 O ATOM 746 CB THR 31 -5.625 44.231 16.687 1.00 2.34 C ATOM 747 CG2 THR 31 -4.928 45.181 17.640 1.00 2.34 C ATOM 748 OG1 THR 31 -5.286 44.608 15.362 1.00 2.34 O ATOM 749 N GLU 32 -6.840 41.983 15.452 1.00 1.51 N ATOM 750 CA GLU 32 -7.354 41.275 14.294 1.00 1.92 C ATOM 751 C GLU 32 -7.549 42.183 13.068 1.00 1.73 C ATOM 752 O GLU 32 -8.241 41.804 12.121 1.00 2.25 O ATOM 753 CB GLU 32 -8.668 40.582 14.635 1.00 2.88 C ATOM 754 CG GLU 32 -8.543 39.475 15.665 1.00 2.88 C ATOM 755 CD GLU 32 -9.860 38.810 15.931 1.00 2.88 C ATOM 756 OE1 GLU 32 -10.842 39.505 16.105 1.00 2.88 O ATOM 757 OE2 GLU 32 -9.905 37.603 15.943 1.00 2.88 O ATOM 758 N ARG 33 -7.059 43.430 13.113 1.00 1.55 N ATOM 759 CA ARG 33 -7.274 44.282 11.946 1.00 1.59 C ATOM 760 C ARG 33 -6.291 45.452 11.787 1.00 1.85 C ATOM 761 O ARG 33 -5.999 46.156 12.760 1.00 2.26 O ATOM 762 CB ARG 33 -8.691 44.851 11.979 1.00 2.39 C ATOM 763 CG ARG 33 -9.123 45.605 10.723 1.00 2.39 C ATOM 764 CD ARG 33 -10.570 45.964 10.762 1.00 2.39 C ATOM 765 NE ARG 33 -10.862 46.963 11.781 1.00 2.39 N ATOM 766 CZ ARG 33 -12.104 47.366 12.126 1.00 2.39 C ATOM 767 NH1 ARG 33 -13.155 46.847 11.530 1.00 2.39 N ATOM 768 NH2 ARG 33 -12.266 48.283 13.065 1.00 2.39 N ATOM 769 N PRO 34 -5.758 45.664 10.564 1.00 2.30 N ATOM 770 CA PRO 34 -5.754 44.800 9.388 1.00 2.71 C ATOM 771 C PRO 34 -4.807 43.626 9.618 1.00 2.28 C ATOM 772 O PRO 34 -3.757 43.777 10.254 1.00 3.08 O ATOM 773 CB PRO 34 -5.254 45.739 8.284 1.00 4.06 C ATOM 774 CG PRO 34 -4.462 46.784 9.004 1.00 4.06 C ATOM 775 CD PRO 34 -5.170 46.968 10.339 1.00 4.06 C ATOM 776 N PHE 35 -5.117 42.472 9.040 1.00 1.50 N ATOM 777 CA PHE 35 -4.214 41.344 9.226 1.00 1.77 C ATOM 778 C PHE 35 -2.973 41.415 8.367 1.00 1.42 C ATOM 779 O PHE 35 -3.032 41.688 7.165 1.00 1.39 O ATOM 780 CB PHE 35 -4.888 40.007 8.928 1.00 2.66 C ATOM 781 CG PHE 35 -5.832 39.519 9.974 1.00 2.66 C ATOM 782 CD1 PHE 35 -7.194 39.578 9.795 1.00 2.66 C ATOM 783 CD2 PHE 35 -5.344 38.968 11.147 1.00 2.66 C ATOM 784 CE1 PHE 35 -8.054 39.088 10.763 1.00 2.66 C ATOM 785 CE2 PHE 35 -6.215 38.483 12.099 1.00 2.66 C ATOM 786 CZ PHE 35 -7.563 38.539 11.906 1.00 2.66 C ATOM 787 N TRP 36 -1.866 41.006 8.966 1.00 1.50 N ATOM 788 CA TRP 36 -0.571 40.886 8.304 1.00 1.57 C ATOM 789 C TRP 36 -0.618 39.993 7.080 1.00 1.40 C ATOM 790 O TRP 36 0.182 40.144 6.158 1.00 1.48 O ATOM 791 CB TRP 36 0.445 40.349 9.280 1.00 2.35 C ATOM 792 CG TRP 36 0.110 38.964 9.825 1.00 2.35 C ATOM 793 CD1 TRP 36 -0.557 38.707 10.988 1.00 2.35 C ATOM 794 CD2 TRP 36 0.396 37.665 9.242 1.00 2.35 C ATOM 795 CE2 TRP 36 -0.116 36.708 10.114 1.00 2.35 C ATOM 796 CE3 TRP 36 1.031 37.245 8.058 1.00 2.35 C ATOM 797 NE1 TRP 36 -0.690 37.363 11.171 1.00 2.35 N ATOM 798 CZ2 TRP 36 -0.019 35.358 9.849 1.00 2.35 C ATOM 799 CZ3 TRP 36 1.124 35.895 7.793 1.00 2.35 C ATOM 800 CH2 TRP 36 0.605 34.978 8.672 1.00 2.35 C ATOM 801 N ILE 37 -1.587 39.094 7.071 1.00 1.31 N ATOM 802 CA ILE 37 -1.823 38.134 6.022 1.00 1.27 C ATOM 803 C ILE 37 -2.084 38.815 4.698 1.00 1.15 C ATOM 804 O ILE 37 -1.633 38.337 3.661 1.00 1.12 O ATOM 805 CB ILE 37 -2.979 37.219 6.407 1.00 1.91 C ATOM 806 CG1 ILE 37 -2.520 36.387 7.541 1.00 1.91 C ATOM 807 CG2 ILE 37 -3.376 36.368 5.251 1.00 1.91 C ATOM 808 CD1 ILE 37 -3.545 35.648 8.230 1.00 1.91 C ATOM 809 N SER 38 -2.844 39.910 4.700 1.00 1.17 N ATOM 810 CA SER 38 -3.123 40.569 3.434 1.00 1.20 C ATOM 811 C SER 38 -1.828 41.084 2.809 1.00 1.13 C ATOM 812 O SER 38 -1.613 40.942 1.597 1.00 1.23 O ATOM 813 CB SER 38 -4.091 41.720 3.638 1.00 1.80 C ATOM 814 OG SER 38 -5.355 41.258 4.042 1.00 1.80 O ATOM 815 N SER 39 -0.949 41.660 3.644 1.00 1.11 N ATOM 816 CA SER 39 0.325 42.189 3.172 1.00 1.24 C ATOM 817 C SER 39 1.266 41.060 2.768 1.00 1.16 C ATOM 818 O SER 39 1.907 41.124 1.712 1.00 1.36 O ATOM 819 CB SER 39 0.973 43.048 4.245 1.00 1.86 C ATOM 820 OG SER 39 0.224 44.208 4.479 1.00 1.86 O ATOM 821 N PHE 40 1.305 40.006 3.586 1.00 1.00 N ATOM 822 CA PHE 40 2.145 38.858 3.313 1.00 0.96 C ATOM 823 C PHE 40 1.805 38.254 1.975 1.00 0.95 C ATOM 824 O PHE 40 2.688 38.044 1.137 1.00 0.98 O ATOM 825 CB PHE 40 2.041 37.811 4.423 1.00 1.44 C ATOM 826 CG PHE 40 2.769 36.556 4.101 1.00 1.44 C ATOM 827 CD1 PHE 40 4.150 36.495 4.178 1.00 1.44 C ATOM 828 CD2 PHE 40 2.067 35.423 3.715 1.00 1.44 C ATOM 829 CE1 PHE 40 4.823 35.329 3.856 1.00 1.44 C ATOM 830 CE2 PHE 40 2.728 34.258 3.399 1.00 1.44 C ATOM 831 CZ PHE 40 4.110 34.208 3.465 1.00 1.44 C ATOM 832 N ILE 41 0.522 38.008 1.743 1.00 1.00 N ATOM 833 CA ILE 41 0.105 37.465 0.463 1.00 1.09 C ATOM 834 C ILE 41 0.444 38.424 -0.664 1.00 1.17 C ATOM 835 O ILE 41 1.093 38.033 -1.632 1.00 1.23 O ATOM 836 CB ILE 41 -1.396 37.163 0.464 1.00 1.64 C ATOM 837 CG1 ILE 41 -1.694 36.016 1.409 1.00 1.64 C ATOM 838 CG2 ILE 41 -1.894 36.854 -0.930 1.00 1.64 C ATOM 839 CD1 ILE 41 -3.160 35.850 1.666 1.00 1.64 C ATOM 840 N GLY 42 0.133 39.709 -0.508 1.00 1.22 N ATOM 841 CA GLY 42 0.442 40.660 -1.569 1.00 1.39 C ATOM 842 C GLY 42 1.925 40.640 -1.967 1.00 1.47 C ATOM 843 O GLY 42 2.257 40.855 -3.139 1.00 1.73 O ATOM 844 N ARG 43 2.815 40.391 -1.000 1.00 1.38 N ATOM 845 CA ARG 43 4.247 40.328 -1.265 1.00 1.53 C ATOM 846 C ARG 43 4.787 38.947 -1.690 1.00 1.53 C ATOM 847 O ARG 43 5.751 38.882 -2.461 1.00 1.62 O ATOM 848 CB ARG 43 5.011 40.795 -0.035 1.00 2.29 C ATOM 849 CG ARG 43 4.840 42.276 0.282 1.00 2.29 C ATOM 850 CD ARG 43 5.601 42.690 1.492 1.00 2.29 C ATOM 851 NE ARG 43 5.436 44.116 1.766 1.00 2.29 N ATOM 852 CZ ARG 43 6.084 44.798 2.732 1.00 2.29 C ATOM 853 NH1 ARG 43 6.951 44.188 3.508 1.00 2.29 N ATOM 854 NH2 ARG 43 5.849 46.091 2.893 1.00 2.29 N ATOM 855 N SER 44 4.201 37.845 -1.194 1.00 1.51 N ATOM 856 CA SER 44 4.751 36.506 -1.449 1.00 1.57 C ATOM 857 C SER 44 3.891 35.529 -2.269 1.00 1.20 C ATOM 858 O SER 44 4.405 34.511 -2.738 1.00 1.33 O ATOM 859 CB SER 44 5.059 35.846 -0.123 1.00 2.35 C ATOM 860 OG SER 44 3.888 35.664 0.609 1.00 2.35 O ATOM 861 N LYS 45 2.596 35.784 -2.401 1.00 1.12 N ATOM 862 CA LYS 45 1.713 34.861 -3.104 1.00 1.56 C ATOM 863 C LYS 45 0.719 35.600 -3.987 1.00 1.60 C ATOM 864 O LYS 45 -0.116 36.360 -3.504 1.00 2.04 O ATOM 865 CB LYS 45 0.966 33.999 -2.086 1.00 2.34 C ATOM 866 CG LYS 45 0.038 32.968 -2.686 1.00 2.34 C ATOM 867 CD LYS 45 -0.618 32.117 -1.606 1.00 2.34 C ATOM 868 CE LYS 45 -1.572 31.096 -2.219 1.00 2.34 C ATOM 869 NZ LYS 45 -2.211 30.236 -1.181 1.00 2.34 N TER END