####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS208_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS208_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 24 - 40 4.85 14.86 LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 4.83 16.60 LCS_AVERAGE: 35.85 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 1.90 21.85 LCS_AVERAGE: 15.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 24 - 29 0.62 13.97 LCS_AVERAGE: 9.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 15 3 4 4 4 6 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT V 3 V 3 4 5 15 3 4 4 4 6 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT Q 4 Q 4 4 5 15 3 4 4 4 6 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT G 5 G 5 4 5 15 0 4 4 4 6 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT P 6 P 6 3 5 15 3 3 3 4 5 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT W 7 W 7 3 4 15 3 3 3 4 5 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT V 8 V 8 3 4 15 3 3 3 4 5 6 7 8 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT G 9 G 9 3 4 15 0 3 3 4 5 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT S 10 S 10 3 4 15 3 3 3 4 5 8 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT S 11 S 11 3 4 15 3 3 3 4 4 6 11 12 12 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT Y 12 Y 12 3 4 15 3 3 3 4 7 8 8 10 11 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT V 13 V 13 3 3 15 1 3 3 4 4 5 8 10 10 12 14 16 17 19 22 24 24 26 28 29 LCS_GDT A 14 A 14 3 4 15 3 3 3 4 6 8 8 10 10 13 15 16 17 19 22 24 24 26 28 29 LCS_GDT E 15 E 15 3 5 15 3 3 3 4 4 4 6 8 9 11 12 13 15 17 18 21 22 24 28 29 LCS_GDT T 16 T 16 4 7 15 3 3 4 5 7 7 7 8 9 10 12 13 15 17 18 20 22 24 26 28 LCS_GDT G 17 G 17 4 7 14 3 3 4 5 7 7 7 8 9 10 12 13 15 17 18 20 22 24 26 28 LCS_GDT Q 18 Q 18 4 7 14 3 3 4 5 7 7 7 8 9 10 12 13 15 17 18 20 22 24 26 28 LCS_GDT N 19 N 19 4 7 15 4 4 4 5 7 7 7 8 9 11 14 14 16 18 19 20 22 24 26 28 LCS_GDT W 20 W 20 4 7 15 4 4 4 5 7 7 7 8 10 12 14 15 16 18 19 20 22 24 26 28 LCS_GDT A 21 A 21 4 7 15 4 4 4 5 7 7 7 9 10 12 14 15 16 18 19 20 22 24 26 28 LCS_GDT S 22 S 22 4 7 15 4 4 4 5 7 7 7 9 10 11 12 15 16 18 19 20 22 24 26 28 LCS_GDT L 23 L 23 3 3 15 3 3 4 5 5 5 7 9 10 12 14 15 16 18 19 21 23 25 28 29 LCS_GDT A 24 A 24 6 7 17 5 6 6 6 7 7 7 9 10 12 14 15 17 19 22 24 24 26 28 29 LCS_GDT A 25 A 25 6 7 17 5 6 6 6 7 7 8 9 11 12 14 15 17 18 22 24 24 26 28 29 LCS_GDT N 26 N 26 6 7 17 5 6 6 6 7 7 8 9 11 12 14 15 16 18 19 20 22 24 27 28 LCS_GDT E 27 E 27 6 7 17 5 6 6 6 7 7 7 9 11 12 14 15 16 18 21 24 24 26 28 29 LCS_GDT L 28 L 28 6 7 17 5 6 6 6 7 7 7 9 11 12 14 15 17 19 22 24 24 26 28 29 LCS_GDT R 29 R 29 6 7 17 3 6 6 6 7 7 7 9 11 12 14 15 16 18 19 24 24 26 28 29 LCS_GDT V 30 V 30 3 8 17 3 4 4 5 7 8 8 9 11 12 14 15 16 19 21 24 24 26 28 29 LCS_GDT T 31 T 31 3 8 17 3 4 5 5 7 8 8 9 11 12 14 15 17 19 22 24 24 26 28 29 LCS_GDT E 32 E 32 3 8 17 3 3 5 5 7 8 8 9 11 12 14 15 17 19 22 24 24 26 28 29 LCS_GDT R 33 R 33 3 8 17 3 3 6 8 8 9 10 11 13 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT P 34 P 34 4 8 17 2 4 4 5 7 8 11 12 13 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT F 35 F 35 4 9 17 3 4 4 8 8 9 11 12 13 15 15 16 17 19 22 24 24 26 28 29 LCS_GDT W 36 W 36 4 10 17 3 4 4 6 10 10 11 12 13 15 15 16 17 19 22 23 24 26 28 29 LCS_GDT I 37 I 37 5 10 17 4 4 6 8 10 10 10 11 13 13 14 15 16 17 18 19 23 26 28 29 LCS_GDT S 38 S 38 5 10 17 4 4 6 8 10 10 10 11 13 13 14 15 16 17 18 19 20 21 28 29 LCS_GDT S 39 S 39 5 10 17 4 4 6 8 10 10 10 11 13 13 14 15 16 17 18 20 22 25 28 29 LCS_GDT F 40 F 40 5 10 17 4 4 6 8 10 10 10 11 13 13 13 15 16 17 18 19 20 21 24 29 LCS_GDT I 41 I 41 5 10 17 4 4 6 8 10 10 10 11 13 13 13 14 15 17 18 19 20 20 21 27 LCS_GDT G 42 G 42 4 10 15 3 3 4 6 10 10 10 10 13 13 13 13 14 15 17 19 20 20 21 26 LCS_GDT R 43 R 43 4 10 15 3 4 6 8 10 10 10 11 13 13 13 13 13 15 17 19 20 20 21 26 LCS_GDT S 44 S 44 4 10 15 0 3 4 5 10 10 10 11 13 13 13 13 13 14 14 14 17 18 19 19 LCS_GDT K 45 K 45 4 10 15 0 3 4 6 10 10 10 11 13 13 13 13 13 14 14 14 14 15 16 19 LCS_AVERAGE LCS_A: 20.25 ( 9.19 15.70 35.85 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 6 8 10 10 11 12 13 15 15 16 17 19 22 24 24 26 28 29 GDT PERCENT_AT 11.36 13.64 13.64 18.18 22.73 22.73 25.00 27.27 29.55 34.09 34.09 36.36 38.64 43.18 50.00 54.55 54.55 59.09 63.64 65.91 GDT RMS_LOCAL 0.26 0.62 0.62 1.21 1.90 1.90 2.71 2.84 3.00 3.57 3.57 3.94 4.18 4.81 5.60 6.05 5.96 6.27 6.65 6.81 GDT RMS_ALL_AT 13.51 13.97 13.97 17.56 21.85 21.85 13.53 13.32 19.03 13.17 13.17 12.81 12.60 12.52 12.38 12.23 12.46 12.43 12.16 12.07 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 2.086 0 0.066 0.065 4.239 24.545 32.727 - LGA V 3 V 3 3.677 0 0.114 1.350 7.784 33.182 18.961 7.254 LGA Q 4 Q 4 2.760 0 0.624 0.908 8.163 29.091 12.929 7.357 LGA G 5 G 5 1.993 0 0.745 0.745 3.473 39.545 39.545 - LGA P 6 P 6 2.641 0 0.353 0.411 5.952 37.273 21.299 5.952 LGA W 7 W 7 3.355 0 0.545 1.190 8.242 16.818 5.195 8.242 LGA V 8 V 8 5.165 0 0.650 0.974 8.961 2.727 1.558 8.961 LGA G 9 G 9 3.473 0 0.363 0.363 3.473 23.182 23.182 - LGA S 10 S 10 1.688 0 0.606 0.729 5.173 58.182 41.818 5.173 LGA S 11 S 11 3.388 0 0.605 0.886 6.463 12.273 8.182 6.463 LGA Y 12 Y 12 6.603 0 0.599 1.560 10.080 1.364 0.455 10.080 LGA V 13 V 13 9.485 0 0.598 0.531 12.200 0.000 0.000 12.200 LGA A 14 A 14 9.392 0 0.609 0.596 10.530 0.000 0.000 - LGA E 15 E 15 13.302 0 0.364 1.405 17.127 0.000 0.000 14.924 LGA T 16 T 16 19.108 0 0.385 0.937 21.769 0.000 0.000 18.903 LGA G 17 G 17 22.278 0 0.072 0.072 24.436 0.000 0.000 - LGA Q 18 Q 18 22.331 0 0.146 0.216 27.030 0.000 0.000 26.321 LGA N 19 N 19 20.346 0 0.604 1.413 21.334 0.000 0.000 18.112 LGA W 20 W 20 20.976 0 0.156 0.399 30.993 0.000 0.000 30.470 LGA A 21 A 21 16.097 0 0.592 0.538 18.116 0.000 0.000 - LGA S 22 S 22 17.406 0 0.569 0.493 20.744 0.000 0.000 20.744 LGA L 23 L 23 13.162 0 0.613 0.671 15.165 0.000 0.000 13.787 LGA A 24 A 24 10.784 0 0.597 0.573 11.094 0.000 0.000 - LGA A 25 A 25 11.198 0 0.021 0.033 12.494 0.000 0.000 - LGA N 26 N 26 15.303 0 0.101 0.873 19.547 0.000 0.000 18.323 LGA E 27 E 27 12.891 0 0.342 0.950 15.000 0.000 0.000 15.000 LGA L 28 L 28 9.064 0 0.325 1.395 10.290 0.000 5.000 2.448 LGA R 29 R 29 12.377 0 0.350 1.459 15.062 0.000 0.000 11.407 LGA V 30 V 30 12.271 0 0.628 0.574 12.617 0.000 0.000 12.617 LGA T 31 T 31 13.571 0 0.169 0.160 17.947 0.000 0.000 16.614 LGA E 32 E 32 10.852 0 0.684 1.449 14.830 0.000 0.000 14.830 LGA R 33 R 33 6.602 0 0.128 1.149 8.479 0.000 0.165 4.986 LGA P 34 P 34 2.682 0 0.358 0.539 6.481 29.091 19.221 5.576 LGA F 35 F 35 2.921 0 0.626 1.383 8.303 35.909 13.058 8.303 LGA W 36 W 36 2.591 0 0.650 0.433 12.304 27.727 11.039 12.304 LGA I 37 I 37 8.035 0 0.200 0.740 11.791 0.000 0.000 11.791 LGA S 38 S 38 11.203 0 0.133 0.598 13.091 0.000 0.000 11.549 LGA S 39 S 39 9.668 0 0.130 0.712 11.577 0.000 0.000 7.648 LGA F 40 F 40 12.702 0 0.064 1.118 17.574 0.000 0.000 17.110 LGA I 41 I 41 17.338 0 0.611 0.602 19.791 0.000 0.000 15.902 LGA G 42 G 42 20.934 0 0.127 0.127 22.029 0.000 0.000 - LGA R 43 R 43 19.065 0 0.390 0.855 21.640 0.000 0.000 10.049 LGA S 44 S 44 25.616 0 0.717 0.807 28.356 0.000 0.000 28.356 LGA K 45 K 45 27.585 0 0.468 0.703 34.139 0.000 0.000 34.139 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.412 10.298 11.334 8.430 5.780 1.143 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.84 28.409 24.480 0.409 LGA_LOCAL RMSD: 2.836 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.322 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.412 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.696315 * X + 0.715185 * Y + 0.060470 * Z + -12.173498 Y_new = -0.371274 * X + -0.431015 * Y + 0.822424 * Z + -58.189484 Z_new = 0.614249 * X + 0.550215 * Y + 0.565651 * Z + -44.270958 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.651741 -0.661434 0.771566 [DEG: -151.9335 -37.8974 44.2075 ] ZXZ: 3.068198 0.969573 0.840332 [DEG: 175.7948 55.5525 48.1475 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS208_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS208_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.84 24.480 10.41 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS208_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 REFINED PARENT N/A ATOM 9 N ALA 2 13.813 37.082 13.834 1.00 12.90 ATOM 10 CA ALA 2 12.539 36.793 13.159 1.00 12.90 ATOM 11 C ALA 2 12.267 37.745 11.978 1.00 12.90 ATOM 12 O ALA 2 12.613 38.925 12.000 1.00 12.90 ATOM 13 CB ALA 2 11.415 36.778 14.200 1.00 13.10 ATOM 14 N VAL 3 11.659 37.195 10.926 1.00 11.70 ATOM 15 CA VAL 3 11.496 37.817 9.605 1.00 11.70 ATOM 16 C VAL 3 10.093 37.509 9.071 1.00 11.70 ATOM 17 O VAL 3 9.787 36.388 8.691 1.00 11.70 ATOM 18 CB VAL 3 12.673 37.427 8.660 1.00 11.40 ATOM 19 CG1 VAL 3 13.331 36.073 8.975 1.00 11.40 ATOM 20 CG2 VAL 3 12.313 37.415 7.168 1.00 11.40 ATOM 21 N GLN 4 9.211 38.508 9.041 1.00 12.80 ATOM 22 CA GLN 4 7.787 38.326 8.710 1.00 12.80 ATOM 23 C GLN 4 7.360 38.996 7.387 1.00 12.80 ATOM 24 O GLN 4 6.176 39.172 7.116 1.00 12.80 ATOM 25 CB GLN 4 6.928 38.708 9.923 1.00 13.70 ATOM 26 CG GLN 4 7.095 37.793 11.153 1.00 13.70 ATOM 27 CD GLN 4 8.164 38.207 12.169 1.00 13.70 ATOM 28 OE1 GLN 4 9.118 38.919 11.893 1.00 13.70 ATOM 29 NE2 GLN 4 8.054 37.737 13.394 1.00 13.70 ATOM 30 N GLY 5 8.333 39.407 6.565 1.00 13.40 ATOM 31 CA GLY 5 8.159 39.839 5.168 1.00 13.40 ATOM 32 C GLY 5 8.197 38.780 4.037 1.00 13.40 ATOM 33 O GLY 5 8.056 39.228 2.902 1.00 13.40 ATOM 34 N PRO 6 8.363 37.439 4.229 1.00 12.90 ATOM 35 CA PRO 6 8.483 36.455 3.126 1.00 12.90 ATOM 36 C PRO 6 7.264 36.198 2.205 1.00 12.90 ATOM 37 O PRO 6 6.796 35.070 2.074 1.00 12.90 ATOM 38 CB PRO 6 9.013 35.149 3.739 1.00 13.60 ATOM 39 CG PRO 6 9.668 35.594 5.030 1.00 13.60 ATOM 40 CD PRO 6 8.821 36.778 5.448 1.00 13.60 ATOM 41 N TRP 7 6.724 37.236 1.570 1.00 11.40 ATOM 42 CA TRP 7 5.781 37.177 0.441 1.00 11.40 ATOM 43 C TRP 7 4.527 36.296 0.615 1.00 11.40 ATOM 44 O TRP 7 3.536 36.744 1.193 1.00 11.40 ATOM 45 CB TRP 7 6.611 36.905 -0.831 1.00 11.30 ATOM 46 CG TRP 7 7.842 37.758 -0.916 1.00 11.30 ATOM 47 CD1 TRP 7 7.844 39.074 -1.223 1.00 11.30 ATOM 48 CD2 TRP 7 9.208 37.447 -0.491 1.00 11.30 ATOM 49 NE1 TRP 7 9.106 39.592 -1.023 1.00 11.30 ATOM 50 CE2 TRP 7 9.969 38.652 -0.508 1.00 11.30 ATOM 51 CE3 TRP 7 9.865 36.284 -0.035 1.00 11.30 ATOM 52 CZ2 TRP 7 11.294 38.718 -0.053 1.00 11.30 ATOM 53 CZ3 TRP 7 11.192 36.338 0.435 1.00 11.30 ATOM 54 CH2 TRP 7 11.906 37.549 0.434 1.00 11.30 ATOM 55 N VAL 8 4.543 35.065 0.100 1.00 11.30 ATOM 56 CA VAL 8 3.441 34.084 0.141 1.00 11.30 ATOM 57 C VAL 8 4.005 32.682 0.387 1.00 11.30 ATOM 58 O VAL 8 4.985 32.290 -0.240 1.00 11.30 ATOM 59 CB VAL 8 2.552 34.183 -1.119 1.00 11.70 ATOM 60 CG1 VAL 8 3.343 34.160 -2.435 1.00 11.70 ATOM 61 CG2 VAL 8 1.489 33.088 -1.200 1.00 11.70 ATOM 62 N GLY 9 3.398 31.955 1.331 1.00 11.50 ATOM 63 CA GLY 9 3.925 30.700 1.875 1.00 11.50 ATOM 64 C GLY 9 3.297 30.350 3.236 1.00 11.50 ATOM 65 O GLY 9 2.100 30.568 3.425 1.00 11.50 ATOM 66 N SER 10 4.113 29.883 4.187 1.00 11.90 ATOM 67 CA SER 10 3.711 29.485 5.554 1.00 11.90 ATOM 68 C SER 10 4.709 29.977 6.625 1.00 11.90 ATOM 69 O SER 10 5.601 30.781 6.341 1.00 11.90 ATOM 70 CB SER 10 3.557 27.951 5.653 1.00 12.00 ATOM 71 OG SER 10 2.777 27.393 4.611 1.00 12.00 ATOM 72 N SER 11 4.564 29.514 7.872 1.00 12.40 ATOM 73 CA SER 11 5.552 29.703 8.951 1.00 12.40 ATOM 74 C SER 11 6.767 28.773 8.781 1.00 12.40 ATOM 75 O SER 11 6.598 27.551 8.763 1.00 12.40 ATOM 76 CB SER 11 4.901 29.431 10.315 1.00 12.90 ATOM 77 OG SER 11 3.909 30.406 10.606 1.00 12.90 ATOM 78 N TYR 12 7.985 29.327 8.701 1.00 11.90 ATOM 79 CA TYR 12 9.241 28.581 8.503 1.00 11.90 ATOM 80 C TYR 12 10.377 28.989 9.462 1.00 11.90 ATOM 81 O TYR 12 10.278 29.949 10.228 1.00 11.90 ATOM 82 CB TYR 12 9.786 28.808 7.076 1.00 11.30 ATOM 83 CG TYR 12 8.826 28.897 5.917 1.00 11.30 ATOM 84 CD1 TYR 12 8.953 29.956 4.996 1.00 11.30 ATOM 85 CD2 TYR 12 7.874 27.887 5.708 1.00 11.30 ATOM 86 CE1 TYR 12 8.150 29.990 3.845 1.00 11.30 ATOM 87 CE2 TYR 12 7.069 27.924 4.560 1.00 11.30 ATOM 88 CZ TYR 12 7.224 28.956 3.616 1.00 11.30 ATOM 89 OH TYR 12 6.461 28.955 2.493 1.00 11.30 ATOM 90 N VAL 13 11.505 28.280 9.341 1.00 13.20 ATOM 91 CA VAL 13 12.818 28.632 9.905 1.00 13.20 ATOM 92 C VAL 13 13.829 28.675 8.754 1.00 13.20 ATOM 93 O VAL 13 14.027 27.680 8.053 1.00 13.20 ATOM 94 CB VAL 13 13.248 27.654 11.018 1.00 13.70 ATOM 95 CG1 VAL 13 14.733 27.800 11.382 1.00 13.70 ATOM 96 CG2 VAL 13 12.417 27.896 12.282 1.00 13.70 ATOM 97 N ALA 14 14.454 29.836 8.552 1.00 14.40 ATOM 98 CA ALA 14 15.604 30.030 7.674 1.00 14.40 ATOM 99 C ALA 14 16.904 29.899 8.492 1.00 14.40 ATOM 100 O ALA 14 16.927 30.160 9.696 1.00 14.40 ATOM 101 CB ALA 14 15.469 31.380 6.952 1.00 14.40 ATOM 102 N GLU 15 17.992 29.499 7.831 1.00 16.70 ATOM 103 CA GLU 15 19.255 29.095 8.473 1.00 16.70 ATOM 104 C GLU 15 20.428 30.025 8.106 1.00 16.70 ATOM 105 O GLU 15 21.573 29.589 7.960 1.00 16.70 ATOM 106 CB GLU 15 19.539 27.612 8.166 1.00 17.30 ATOM 107 CG GLU 15 18.375 26.686 8.560 1.00 17.30 ATOM 108 CD GLU 15 18.779 25.197 8.571 1.00 17.30 ATOM 109 OE1 GLU 15 19.563 24.752 7.696 1.00 17.30 ATOM 110 OE2 GLU 15 18.296 24.446 9.453 1.00 17.30 ATOM 111 N THR 16 20.136 31.318 7.921 1.00 17.50 ATOM 112 CA THR 16 21.045 32.367 7.413 1.00 17.50 ATOM 113 C THR 16 22.086 32.808 8.469 1.00 17.50 ATOM 114 O THR 16 22.154 33.968 8.876 1.00 17.50 ATOM 115 CB THR 16 20.213 33.539 6.844 1.00 17.50 ATOM 116 OG1 THR 16 19.148 33.032 6.059 1.00 17.50 ATOM 117 CG2 THR 16 21.007 34.467 5.927 1.00 17.50 ATOM 118 N GLY 17 22.863 31.853 8.990 1.00 18.30 ATOM 119 CA GLY 17 23.869 32.026 10.054 1.00 18.30 ATOM 120 C GLY 17 23.322 32.026 11.493 1.00 18.30 ATOM 121 O GLY 17 24.103 32.007 12.444 1.00 18.30 ATOM 122 N GLN 18 21.995 32.022 11.656 1.00 17.00 ATOM 123 CA GLN 18 21.230 31.978 12.916 1.00 17.00 ATOM 124 C GLN 18 19.878 31.278 12.659 1.00 17.00 ATOM 125 O GLN 18 19.561 30.946 11.514 1.00 17.00 ATOM 126 CB GLN 18 20.956 33.414 13.432 1.00 17.50 ATOM 127 CG GLN 18 22.181 34.280 13.771 1.00 17.50 ATOM 128 CD GLN 18 22.983 33.774 14.974 1.00 17.50 ATOM 129 OE1 GLN 18 22.447 33.289 15.965 1.00 17.50 ATOM 130 NE2 GLN 18 24.293 33.896 14.961 1.00 17.50 ATOM 131 N ASN 19 19.053 31.080 13.693 1.00 15.70 ATOM 132 CA ASN 19 17.646 30.702 13.518 1.00 15.70 ATOM 133 C ASN 19 16.860 31.975 13.136 1.00 15.70 ATOM 134 O ASN 19 16.528 32.784 14.004 1.00 15.70 ATOM 135 CB ASN 19 17.132 30.039 14.813 1.00 16.10 ATOM 136 CG ASN 19 15.662 29.623 14.765 1.00 16.10 ATOM 137 OD1 ASN 19 14.879 30.028 13.917 1.00 16.10 ATOM 138 ND2 ASN 19 15.231 28.786 15.682 1.00 16.10 ATOM 139 N TRP 20 16.603 32.170 11.839 1.00 13.70 ATOM 140 CA TRP 20 15.768 33.253 11.303 1.00 13.70 ATOM 141 C TRP 20 14.333 32.738 11.114 1.00 13.70 ATOM 142 O TRP 20 14.021 32.139 10.085 1.00 13.70 ATOM 143 CB TRP 20 16.372 33.753 9.977 1.00 13.80 ATOM 144 CG TRP 20 17.643 34.547 10.053 1.00 13.80 ATOM 145 CD1 TRP 20 18.871 34.019 10.237 1.00 13.80 ATOM 146 CD2 TRP 20 17.860 35.984 9.865 1.00 13.80 ATOM 147 NE1 TRP 20 19.826 35.015 10.197 1.00 13.80 ATOM 148 CE2 TRP 20 19.262 36.244 9.953 1.00 13.80 ATOM 149 CE3 TRP 20 17.031 37.089 9.570 1.00 13.80 ATOM 150 CZ2 TRP 20 19.812 37.520 9.765 1.00 13.80 ATOM 151 CZ3 TRP 20 17.573 38.373 9.362 1.00 13.80 ATOM 152 CH2 TRP 20 18.958 38.593 9.466 1.00 13.80 ATOM 153 N ALA 21 13.443 32.945 12.086 1.00 12.40 ATOM 154 CA ALA 21 12.046 32.506 11.988 1.00 12.40 ATOM 155 C ALA 21 11.311 33.279 10.874 1.00 12.40 ATOM 156 O ALA 21 10.949 34.442 11.057 1.00 12.40 ATOM 157 CB ALA 21 11.381 32.665 13.361 1.00 12.40 ATOM 158 N SER 22 11.142 32.657 9.703 1.00 12.00 ATOM 159 CA SER 22 10.642 33.282 8.475 1.00 12.00 ATOM 160 C SER 22 9.160 32.961 8.248 1.00 12.00 ATOM 161 O SER 22 8.808 31.919 7.706 1.00 12.00 ATOM 162 CB SER 22 11.566 32.983 7.279 1.00 12.50 ATOM 163 OG SER 22 11.946 31.626 7.161 1.00 12.50 ATOM 164 N LEU 23 8.268 33.850 8.705 1.00 10.40 ATOM 165 CA LEU 23 6.809 33.659 8.630 1.00 10.40 ATOM 166 C LEU 23 6.225 34.437 7.441 1.00 10.40 ATOM 167 O LEU 23 6.235 35.666 7.455 1.00 10.40 ATOM 168 CB LEU 23 6.117 34.051 9.959 1.00 10.20 ATOM 169 CG LEU 23 6.825 33.682 11.280 1.00 10.20 ATOM 170 CD1 LEU 23 5.924 34.074 12.454 1.00 10.20 ATOM 171 CD2 LEU 23 7.137 32.194 11.420 1.00 10.20 ATOM 172 N ALA 24 5.733 33.753 6.405 1.00 11.00 ATOM 173 CA ALA 24 5.299 34.391 5.156 1.00 11.00 ATOM 174 C ALA 24 4.225 35.483 5.347 1.00 11.00 ATOM 175 O ALA 24 3.282 35.318 6.120 1.00 11.00 ATOM 176 CB ALA 24 4.825 33.308 4.185 1.00 11.20 ATOM 177 N ALA 25 4.351 36.593 4.604 1.00 10.90 ATOM 178 CA ALA 25 3.549 37.802 4.824 1.00 10.90 ATOM 179 C ALA 25 2.053 37.613 4.520 1.00 10.90 ATOM 180 O ALA 25 1.219 38.026 5.321 1.00 10.90 ATOM 181 CB ALA 25 4.162 38.950 4.010 1.00 10.90 ATOM 182 N ASN 26 1.686 36.957 3.411 1.00 12.50 ATOM 183 CA ASN 26 0.274 36.668 3.099 1.00 12.50 ATOM 184 C ASN 26 -0.363 35.800 4.193 1.00 12.50 ATOM 185 O ASN 26 -1.346 36.215 4.806 1.00 12.50 ATOM 186 CB ASN 26 0.145 36.008 1.710 1.00 13.10 ATOM 187 CG ASN 26 -0.129 37.010 0.603 1.00 13.10 ATOM 188 OD1 ASN 26 -1.213 37.066 0.044 1.00 13.10 ATOM 189 ND2 ASN 26 0.829 37.838 0.260 1.00 13.10 ATOM 190 N GLU 27 0.236 34.648 4.514 1.00 12.50 ATOM 191 CA GLU 27 -0.273 33.734 5.552 1.00 12.50 ATOM 192 C GLU 27 0.091 34.172 6.994 1.00 12.50 ATOM 193 O GLU 27 0.482 33.375 7.852 1.00 12.50 ATOM 194 CB GLU 27 0.047 32.268 5.217 1.00 13.30 ATOM 195 CG GLU 27 -0.998 31.332 5.847 1.00 13.30 ATOM 196 CD GLU 27 -0.711 29.848 5.563 1.00 13.30 ATOM 197 OE1 GLU 27 -1.276 29.297 4.585 1.00 13.30 ATOM 198 OE2 GLU 27 0.014 29.204 6.361 1.00 13.30 ATOM 199 N LEU 28 -0.020 35.482 7.236 1.00 10.90 ATOM 200 CA LEU 28 0.110 36.158 8.529 1.00 10.90 ATOM 201 C LEU 28 -0.711 37.459 8.526 1.00 10.90 ATOM 202 O LEU 28 -1.600 37.627 9.355 1.00 10.90 ATOM 203 CB LEU 28 1.606 36.401 8.833 1.00 10.10 ATOM 204 CG LEU 28 1.888 37.118 10.168 1.00 10.10 ATOM 205 CD1 LEU 28 1.584 36.238 11.381 1.00 10.10 ATOM 206 CD2 LEU 28 3.358 37.526 10.231 1.00 10.10 ATOM 207 N ARG 29 -0.454 38.364 7.567 1.00 11.90 ATOM 208 CA ARG 29 -1.164 39.653 7.436 1.00 11.90 ATOM 209 C ARG 29 -2.579 39.523 6.869 1.00 11.90 ATOM 210 O ARG 29 -3.476 40.231 7.317 1.00 11.90 ATOM 211 CB ARG 29 -0.386 40.624 6.522 1.00 13.60 ATOM 212 CG ARG 29 1.074 40.944 6.872 1.00 13.60 ATOM 213 CD ARG 29 1.417 41.056 8.366 1.00 13.60 ATOM 214 NE ARG 29 2.338 42.190 8.555 1.00 13.60 ATOM 215 CZ ARG 29 2.176 43.246 9.324 1.00 13.60 ATOM 216 NH1 ARG 29 2.783 44.356 9.035 1.00 13.60 ATOM 217 NH2 ARG 29 1.418 43.223 10.367 1.00 13.60 ATOM 218 N VAL 30 -2.756 38.667 5.859 1.00 10.80 ATOM 219 CA VAL 30 -4.026 38.528 5.122 1.00 10.80 ATOM 220 C VAL 30 -4.932 37.476 5.773 1.00 10.80 ATOM 221 O VAL 30 -6.137 37.701 5.897 1.00 10.80 ATOM 222 CB VAL 30 -3.766 38.236 3.626 1.00 10.30 ATOM 223 CG1 VAL 30 -5.057 38.036 2.824 1.00 10.30 ATOM 224 CG2 VAL 30 -2.983 39.383 2.969 1.00 10.30 ATOM 225 N THR 31 -4.366 36.341 6.207 1.00 12.50 ATOM 226 CA THR 31 -5.146 35.194 6.719 1.00 12.50 ATOM 227 C THR 31 -5.321 35.179 8.244 1.00 12.50 ATOM 228 O THR 31 -6.435 34.972 8.727 1.00 12.50 ATOM 229 CB THR 31 -4.528 33.864 6.258 1.00 13.10 ATOM 230 OG1 THR 31 -3.249 33.705 6.826 1.00 13.10 ATOM 231 CG2 THR 31 -4.360 33.773 4.741 1.00 13.10 ATOM 232 N GLU 32 -4.246 35.375 9.021 1.00 12.70 ATOM 233 CA GLU 32 -4.257 35.154 10.483 1.00 12.70 ATOM 234 C GLU 32 -4.655 36.387 11.311 1.00 12.70 ATOM 235 O GLU 32 -5.067 36.247 12.466 1.00 12.70 ATOM 236 CB GLU 32 -2.891 34.626 10.961 1.00 13.40 ATOM 237 CG GLU 32 -2.453 33.340 10.240 1.00 13.40 ATOM 238 CD GLU 32 -1.554 32.432 11.108 1.00 13.40 ATOM 239 OE1 GLU 32 -0.741 32.938 11.922 1.00 13.40 ATOM 240 OE2 GLU 32 -1.662 31.186 10.985 1.00 13.40 ATOM 241 N ARG 33 -4.534 37.590 10.732 1.00 12.20 ATOM 242 CA ARG 33 -4.719 38.893 11.397 1.00 12.20 ATOM 243 C ARG 33 -5.598 39.850 10.559 1.00 12.20 ATOM 244 O ARG 33 -5.734 39.639 9.351 1.00 12.20 ATOM 245 CB ARG 33 -3.331 39.514 11.643 1.00 13.60 ATOM 246 CG ARG 33 -2.357 38.708 12.524 1.00 13.60 ATOM 247 CD ARG 33 -2.821 38.553 13.977 1.00 13.60 ATOM 248 NE ARG 33 -1.744 37.960 14.801 1.00 13.60 ATOM 249 CZ ARG 33 -1.343 38.330 16.005 1.00 13.60 ATOM 250 NH1 ARG 33 -0.323 37.741 16.564 1.00 13.60 ATOM 251 NH2 ARG 33 -1.926 39.281 16.680 1.00 13.60 ATOM 252 N PRO 34 -6.188 40.906 11.156 1.00 11.30 ATOM 253 CA PRO 34 -7.045 41.858 10.443 1.00 11.30 ATOM 254 C PRO 34 -6.257 42.898 9.618 1.00 11.30 ATOM 255 O PRO 34 -6.047 44.030 10.056 1.00 11.30 ATOM 256 CB PRO 34 -7.930 42.481 11.532 1.00 11.70 ATOM 257 CG PRO 34 -7.037 42.454 12.771 1.00 11.70 ATOM 258 CD PRO 34 -6.249 41.157 12.594 1.00 11.70 ATOM 259 N PHE 35 -5.863 42.515 8.397 1.00 9.90 ATOM 260 CA PHE 35 -5.315 43.319 7.278 1.00 9.90 ATOM 261 C PHE 35 -4.006 44.111 7.470 1.00 9.90 ATOM 262 O PHE 35 -3.147 44.104 6.590 1.00 9.90 ATOM 263 CB PHE 35 -6.387 44.297 6.749 1.00 10.50 ATOM 264 CG PHE 35 -7.822 43.806 6.761 1.00 10.50 ATOM 265 CD1 PHE 35 -8.728 44.314 7.713 1.00 10.50 ATOM 266 CD2 PHE 35 -8.255 42.853 5.821 1.00 10.50 ATOM 267 CE1 PHE 35 -10.061 43.870 7.726 1.00 10.50 ATOM 268 CE2 PHE 35 -9.589 42.408 5.835 1.00 10.50 ATOM 269 CZ PHE 35 -10.493 42.917 6.786 1.00 10.50 ATOM 270 N TRP 36 -3.894 44.876 8.558 1.00 8.60 ATOM 271 CA TRP 36 -2.876 45.895 8.873 1.00 8.60 ATOM 272 C TRP 36 -2.822 47.115 7.935 1.00 8.60 ATOM 273 O TRP 36 -2.608 48.215 8.432 1.00 8.60 ATOM 274 CB TRP 36 -1.518 45.241 9.116 1.00 9.90 ATOM 275 CG TRP 36 -1.570 44.093 10.074 1.00 9.90 ATOM 276 CD1 TRP 36 -1.466 42.796 9.721 1.00 9.90 ATOM 277 CD2 TRP 36 -1.812 44.092 11.517 1.00 9.90 ATOM 278 NE1 TRP 36 -1.448 42.008 10.856 1.00 9.90 ATOM 279 CE2 TRP 36 -1.679 42.755 11.992 1.00 9.90 ATOM 280 CE3 TRP 36 -2.155 45.074 12.471 1.00 9.90 ATOM 281 CZ2 TRP 36 -1.804 42.417 13.347 1.00 9.90 ATOM 282 CZ3 TRP 36 -2.355 44.732 13.824 1.00 9.90 ATOM 283 CH2 TRP 36 -2.157 43.414 14.270 1.00 9.90 ATOM 284 N ILE 37 -3.111 46.982 6.633 1.00 7.40 ATOM 285 CA ILE 37 -3.305 48.120 5.702 1.00 7.40 ATOM 286 C ILE 37 -4.423 49.042 6.224 1.00 7.40 ATOM 287 O ILE 37 -4.172 50.201 6.553 1.00 7.40 ATOM 288 CB ILE 37 -3.580 47.594 4.263 1.00 7.30 ATOM 289 CG1 ILE 37 -2.278 47.122 3.571 1.00 7.30 ATOM 290 CG2 ILE 37 -4.332 48.589 3.356 1.00 7.30 ATOM 291 CD1 ILE 37 -1.429 48.229 2.923 1.00 7.30 ATOM 292 N SER 38 -5.643 48.513 6.369 1.00 7.80 ATOM 293 CA SER 38 -6.801 49.274 6.870 1.00 7.80 ATOM 294 C SER 38 -6.665 49.604 8.362 1.00 7.80 ATOM 295 O SER 38 -6.898 50.740 8.781 1.00 7.80 ATOM 296 CB SER 38 -8.087 48.481 6.595 1.00 8.30 ATOM 297 OG SER 38 -9.228 49.183 7.065 1.00 8.30 ATOM 298 N SER 39 -6.211 48.637 9.166 1.00 6.80 ATOM 299 CA SER 39 -6.111 48.781 10.627 1.00 6.80 ATOM 300 C SER 39 -5.067 49.817 11.069 1.00 6.80 ATOM 301 O SER 39 -5.296 50.511 12.061 1.00 6.80 ATOM 302 CB SER 39 -5.846 47.416 11.275 1.00 6.80 ATOM 303 OG SER 39 -6.898 46.529 10.929 1.00 6.80 ATOM 304 N PHE 40 -3.963 49.999 10.327 1.00 6.30 ATOM 305 CA PHE 40 -3.032 51.105 10.581 1.00 6.30 ATOM 306 C PHE 40 -3.570 52.463 10.093 1.00 6.30 ATOM 307 O PHE 40 -3.427 53.457 10.799 1.00 6.30 ATOM 308 CB PHE 40 -1.646 50.821 9.989 1.00 7.00 ATOM 309 CG PHE 40 -0.680 51.948 10.300 1.00 7.00 ATOM 310 CD1 PHE 40 -0.251 52.151 11.626 1.00 7.00 ATOM 311 CD2 PHE 40 -0.321 52.876 9.305 1.00 7.00 ATOM 312 CE1 PHE 40 0.531 53.271 11.954 1.00 7.00 ATOM 313 CE2 PHE 40 0.462 53.996 9.637 1.00 7.00 ATOM 314 CZ PHE 40 0.897 54.192 10.958 1.00 7.00 ATOM 315 N ILE 41 -4.263 52.522 8.946 1.00 6.90 ATOM 316 CA ILE 41 -4.944 53.756 8.500 1.00 6.90 ATOM 317 C ILE 41 -5.996 54.211 9.539 1.00 6.90 ATOM 318 O ILE 41 -6.158 55.410 9.778 1.00 6.90 ATOM 319 CB ILE 41 -5.530 53.568 7.077 1.00 7.60 ATOM 320 CG1 ILE 41 -4.377 53.478 6.046 1.00 7.60 ATOM 321 CG2 ILE 41 -6.494 54.705 6.688 1.00 7.60 ATOM 322 CD1 ILE 41 -4.821 53.003 4.655 1.00 7.60 ATOM 323 N GLY 42 -6.648 53.263 10.228 1.00 7.20 ATOM 324 CA GLY 42 -7.543 53.518 11.365 1.00 7.20 ATOM 325 C GLY 42 -6.865 54.155 12.593 1.00 7.20 ATOM 326 O GLY 42 -7.522 54.875 13.350 1.00 7.20 ATOM 327 N ARG 43 -5.548 53.961 12.773 1.00 6.70 ATOM 328 CA ARG 43 -4.692 54.669 13.751 1.00 6.70 ATOM 329 C ARG 43 -4.275 56.022 13.150 1.00 6.70 ATOM 330 O ARG 43 -3.102 56.284 12.888 1.00 6.70 ATOM 331 CB ARG 43 -3.492 53.780 14.155 1.00 7.70 ATOM 332 CG ARG 43 -3.930 52.484 14.859 1.00 7.70 ATOM 333 CD ARG 43 -2.754 51.519 15.053 1.00 7.70 ATOM 334 NE ARG 43 -3.216 50.263 15.682 1.00 7.70 ATOM 335 CZ ARG 43 -2.891 49.773 16.867 1.00 7.70 ATOM 336 NH1 ARG 43 -3.446 48.674 17.293 1.00 7.70 ATOM 337 NH2 ARG 43 -2.027 50.350 17.654 1.00 7.70 ATOM 338 N SER 44 -5.274 56.875 12.916 1.00 6.40 ATOM 339 CA SER 44 -5.223 58.120 12.126 1.00 6.40 ATOM 340 C SER 44 -4.247 59.215 12.589 1.00 6.40 ATOM 341 O SER 44 -4.010 60.162 11.832 1.00 6.40 ATOM 342 CB SER 44 -6.639 58.702 12.034 1.00 6.80 ATOM 343 OG SER 44 -7.120 59.055 13.326 1.00 6.80 ATOM 344 N LYS 45 -3.627 59.102 13.776 1.00 5.80 ATOM 345 CA LYS 45 -2.525 59.969 14.249 1.00 5.80 ATOM 346 C LYS 45 -1.183 59.666 13.552 1.00 5.80 ATOM 347 O LYS 45 -0.147 59.459 14.184 1.00 5.80 ATOM 348 CB LYS 45 -2.450 59.946 15.788 1.00 6.70 ATOM 349 CG LYS 45 -3.690 60.609 16.410 1.00 6.70 ATOM 350 CD LYS 45 -3.516 60.845 17.917 1.00 6.70 ATOM 351 CE LYS 45 -4.694 61.673 18.446 1.00 6.70 ATOM 352 NZ LYS 45 -4.511 62.049 19.874 1.00 6.70 TER END